Sed0020139 (gene) Chayote v1

Overview
NameSed0020139
Typegene
OrganismSechium edule (Chayote v1)
Descriptionmediator of RNA polymerase II transcription subunit 19a-like
LocationLG07: 3879334 .. 3884345 (+)
RNA-Seq ExpressionSed0020139
SyntenySed0020139
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATCTGAAGATAAGAAGTTCGGTCTAGGTAAATATTGATTTACTTAATTTACTCCTCTCTCGTGCACTGGCATGTTTAAAAAGTGAGACATAGATTGGTCTATACATTGTTGCTTTTATATTTAGAAATATTTCTAATGATACTATAGGATTGTAAATGAACATACCTGTTTATGTTTCGAGTTAAAACATGCACTTGGGGTGCCCCCAAGGGGTGACATAGTTGTTGAAGGCTTGAGCTTTGAAAGTGTGCTCCCCTCAAGGTCTCAAGTTCGAGACTCTCCTGTTACATTAATTTGTAGACACCTCCCGTGTCCCCATTCCTTCGATGTCTCCTGGTGCCTGGCCTAAGAACGGACGTGGTTATCTTGGGTATAGTGGAGCAAAACTCCAATTTCCTGGTTTAAAAAGAAAAATGGCATTTTGTCTGTTATATTTGGTATGCAAGGATACTGTATGTTGACTATTGATAAAAAAAATCCATTTCTTTATGTTTACTCTTTTACTAGGAGCAACTTAGGTTAGACTAGTGGTTAAAAGGGAGTTCAATCCATGATATTTAGCAATTTATTTTCTATAAATTTCCTTGACACCAAATGTAGTAGGGTTAGATAATAATAGTCAAGGTGCATGCAAGCTTTTCTGGACACTCACAAATATGAAATATAGAGCAACTTAATTGGAGACTCTTCTTGTAAGTTGTTTTCTTTGTTTGAGCTATTTTTTTGTATGCTCCTTTGTATGTTCTTTCATTCTTTTCTTGATGAAAGTTTGGATCATTATAAAAAAGAGCCACTTAGGGAGTACTTAGGGAGTTAAATACATTAGCATTTTCTTCTAAATTCAATTGAAATGCTACGAGAGTTATTGATTTCAACCCCATAAGCCTAAAGCCTTACAATAAGTTTTGAAAAAGATCCTTGCGAAATTTCTTATTGGAGGGTTGAAAAGTTTCCTTCCTGAAATTGACCTTTTGTAGCTGAAAGCCAAATCATAGATCCCGTTCCAATTGCAAATGAAGCTATTGACGAGTGTAGAATAAGTTTAAGTAAGGGGTAATATTCTCACTTGACTTTGGAAAGACTTGAGGCTGTTTGGTATTTTTTAGACCATTCTATAGAAATCAAAGCACTACGATCTGATTCAGATGCTCTGTGGACATTCCTTTAGAAGGAAAGAAAAACTGTGGATTGAGTTGCTTAGCAAGAGGGGAAGGGGTTGGAAATTTGGAATGAGGTTCTTTCATTTCCTCTTCTTAGCATAACTTTCAAATTCCTATTTTTTTGGTTAAAACTCCTGTAGGAAGAATGATTCACGTACAGAATATCATTCTTGCTAGGAAAAATAATATTTTGTATACCGTAGGTCCGTAGAGAAGGTGGATTTGCGCTTTAGAGGTAGATGAAGAGATCTGCAATCCCCTTTTCCCTTTCTAAGTCATCATTTCCATCCATTCCCTTTATCATCATCTCCATCCATCGCAGCTGTATTTTGGAAAGTGTTGGAGTTGAGTTTGGTATGGGGTGTAAAGCTCACCAGCTTTTTTTACATATTGCTTGAAGGAATTCCGCATCCCACTCCCCTGTTGATCTCATATAATTCAAGGTTTCCTTTCTTCAAAGAAATATGGTCTTTCTGACTGTTGTCAGCACATTCCAAGGGTTCATTGTTACTTTTTCGTGCTAATTTCCCTTTCTTCTTTGGTTTGTTCATTTATTATTCGTATATTATTATTGTAACTCCTTGTGTCTCTTAGTCTTGTGCATTTTAAAATTTTATTTTATTATCCTTTGATTGGCTTTTCCTATTTAGTTAGTCGTTTAATCTGTTAAAATGTTTCTTTATTGCTTTTATTTCAATTTAAATAGAAAAGACCATGGAACCTTGGAAGTACAAGATATAGCTATTTTTTTATTCCATCTTGTTCATTTTCTATTTGTATTGATTATCTTCTGTCATCTGATTTTTTTCTATTTTATTTGTATCTACAGGACCTAGGGAATTGACTGGTGCTGTGGATCTTATAAGTCACTACAAGCTGTTACCTCACCATGAATTTTTCTGCAAGAAGTCACTTCCATTATCAATTTCAGACACACATTATCTTCATAACGTGATTGGAGACACAGAAATTAGAAAAGGGGAAGGGATGCAGTTGAATCAACTCATACAGAATCCTTCTTACCCTAGAGAGACTAATGCCCGCATACAGCCATTCGACCAAGATATTCTCATAGAAGCCTTCCAATTGAGGGAAACTGGTCCTGTTGAGCTACCTTCTGTAAGAATTCTATTACTAAATTTGTTAACGTGAGCCGCTTTCTTTAACTTTCTTCTATCAGTATCAGCTGGAACTTTTATGTCACCAGGGCAACGGGTCTGATTACCAGTGTTTCTCATTCTGATTGTTTTCTCAGCAAGTGATGCTCCTTTGTTTTCTTTGGCTAGGCCGAGAAGGGTGTTCCTACTATTCCAGGGAAGTCAAAAAGCGAGTCCAAAGATAAAGACAGAAAGCATAAGAAGCATAAAGATAGGGATAAGGACAAGGATAGAGAACATAAGAAGCACAAGCATCGACATAAAGACCGAAGTAAGGATAAAGACAAGGACAAGAAGAAAGACAAAAGTGGCCATCAAGAATCTGGTGCAGACCATTCGAAGAAGCATCATGAAAAGGTTGGAAAGCCCTTACCTTACTCTTTTCCAGCTCCTTTGTAAAATACCAGGATTAGATAACAATGGGAATGAGATGGTTAGGGAGTAGATCGTCATTAAAATTTGATTAACATTATGGATTTTTTAGTTTATCCCAATTCCTAGTTTGTTGTTACAAGATGATCACTTCGTGAAGTGTATCCCTTTCATTGATTTTTTTCTTCATTTGGCCTAGATCATTGACCCCTTAGCATGCCCTAAAGACGGGGTATTGAAAACTTAATTGGCGTGTAACTTATTTTCTATGCTAAAAATTACGGATTAAGTAATCTTTTTGTGTCTTGCATATAGCTCAAATGAGCTGTTTCTTGATTTCTATCTTCATTTAATTTTCAGAAAAGGAAGCACGATGGAGAAGATGATATTAATGACATTCATAGGCACAAAAAAAGTAAGGTAATACGAAGTCGACATTTTTCCAACTCTAGATTGTTCGCTTACTGAAAAGAATAATCATCCGGGTTCACTTTTATCTGCATAACCCATGTTTTGATTTTGAAATTGATTGTTTTCCAACTAAAAGTCTTCTGATTTATATATGCAGCATAAGACTGCAAAAATTGAAGAAATGGGAGTGATAAAGGTAGCAGGCTGACATTGTGGAATACTCTAGGTCATTTATTTCCTCGTATGGTTGTGTAGAAAGATTGGTGGAATTTTCACTTAATATTGTCAAAAAATACTTGAGGTATATTCATATCTTTCAAGTATCTTCTATATTCAATTGTTCTTCATTTGATTACATTCTTTTTCATTCCCGGTATTTTTTCCTTTCAAACCAAATTTTCATTGATATTTCATATTTGAAAAATCTTATGGCATAAAACTGTACCCATCATATAACTTAAAACAGTAAAATAGAAATTGTTAGAGTCTACAAAAAGACATCTCAACTGTATTTCACTACATTATGAGTATAACTTCACTAAGTGCTAGACTAGGTACTGAGGAGGCTCGGAACATAGAAGAATTAGGCTGTTAGCAATTCCCTTTGTAGGATTAGGATGTTAGCAAAATGTGAGAGATTCCATGTGCTATCTTTTGTATTGTAGAAATTAAGTTGTTCTTCTCTAGTTTATTTAGGGTTCCTCGGCAAGTTCGTAGAAAATACTATTTTTACATTAGATTGCGTCAGAGTTTGTTTTTTGGTGGAGTATAGTCTAGTATAGCTTTTGCAGGAAGATTTCACTCTCAAACTTCTTTCTCTTGGAGGATTTTTTATTCAAATGAGTCCAAGAAAGATTGTATAAGTTATCATTTAATCAAGTCACTACCATGTGGAAAACCATGGTGTTGAGAGTTAAAACCTTCCTTTTTTTTTATTGGAAACATACTTTTGTTCTCTTTTTGATAGGAAACAAATAATTTCATTGATATAAAGAATGTGTTACAAAAACCATTACAACCAAGTTAGGTCCCCTCTAATATCGGAAGATGACCAAAAACAGTTAGAACAAAACAAATCGAGGGGGTTTTGAGGACCAATTTTGGAGGAGCCAGGGGCAGAATAAACAAAACCATAGTGCAAGATGATCGATGCAATGAGGTAGATGAGCTTTGAACCGATACTAGGATGATATCTAAAATCGATCGGCTAAAAACCAGTATGGATAAGACATATTGGATCAGTGCAGTGGAACCGACCGATCCAATCTTGGATGGACCGAAGCATGCTATTACCAAAGTGGTTTGTAGGAAGAGCCGACCCACAAACTAGGGTTTTTCCATCTTTCTCATCCTCGATCCGTCTTTGCCGCCATCTGAATCGGAATCAGTGGGGAGAAGCTATTTGTGTGTGAGGTAGAAGATACCCTTGGCTATACCAAGGACATCATGAGCAAGAAGATTGAAGTAGATGTAGAGTCAGGCGCATGACTCTGTGAGGATAGTCTAAGTGTACATAACGTGATTCAAACACTTACGACAAAATAAAATAATAATTAAAAAAAAAAAACCTGTTGTGGTTGTCTGAAGTATGCCAATACTAATTGAGTATGCCAGGTTCTTCTCAAACTTTTATACTTTTATTTGTGGGAAGCTAAATCCATCTCAGTTGGCTGAGCCATGCAGAAATTGCCCGTTGTATAGTATCTTTAGTTCCATTGGTATAATGAATGACTTAGAGATAGTAGTTTAATCATTTTCTTATGCTCTTGTTTTCTCATATTTGGCTTCTCCTGGACCCTTTGATGATTGTTGTTTTTCTTTCTTCGTGCAGAGCAGCTTCTGAGGAGGGCAAATTTATCGATTTTAGGCTATGTGGAAGCAAATGTAAAAAAAAATGGGTGGAATGA

mRNA sequence

ATGGAATCTGAAGATAAGAAGTTCGGTCTAGGACCTAGGGAATTGACTGGTGCTGTGGATCTTATAAGTCACTACAAGCTGTTACCTCACCATGAATTTTTCTGCAAGAAGTCACTTCCATTATCAATTTCAGACACACATTATCTTCATAACGTGATTGGAGACACAGAAATTAGAAAAGGGGAAGGGATGCAGTTGAATCAACTCATACAGAATCCTTCTTACCCTAGAGAGACTAATGCCCGCATACAGCCATTCGACCAAGATATTCTCATAGAAGCCTTCCAATTGAGGGAAACTGGTCCTGTTGAGCTACCTTCTGCCGAGAAGGGTGTTCCTACTATTCCAGGGAAGTCAAAAAGCGAGTCCAAAGATAAAGACAGAAAGCATAAGAAGCATAAAGATAGGGATAAGGACAAGGATAGAGAACATAAGAAGCACAAGCATCGACATAAAGACCGAAGTAAGGATAAAGACAAGGACAAGAAGAAAGACAAAAGTGGCCATCAAGAATCTGGTGCAGACCATTCGAAGAAGCATCATGAAAAGAAAAGGAAGCACGATGGAGAAGATGATATTAATGACATTCATAGGCACAAAAAAAGTAAGCATAAGACTGCAAAAATTGAAGAAATGGGAGTGATAAAGGAGGGCAAATTTATCGATTTTAGGCTATGTGGAAGCAAATGTAAAAAAAAATGGGTGGAATGA

Coding sequence (CDS)

ATGGAATCTGAAGATAAGAAGTTCGGTCTAGGACCTAGGGAATTGACTGGTGCTGTGGATCTTATAAGTCACTACAAGCTGTTACCTCACCATGAATTTTTCTGCAAGAAGTCACTTCCATTATCAATTTCAGACACACATTATCTTCATAACGTGATTGGAGACACAGAAATTAGAAAAGGGGAAGGGATGCAGTTGAATCAACTCATACAGAATCCTTCTTACCCTAGAGAGACTAATGCCCGCATACAGCCATTCGACCAAGATATTCTCATAGAAGCCTTCCAATTGAGGGAAACTGGTCCTGTTGAGCTACCTTCTGCCGAGAAGGGTGTTCCTACTATTCCAGGGAAGTCAAAAAGCGAGTCCAAAGATAAAGACAGAAAGCATAAGAAGCATAAAGATAGGGATAAGGACAAGGATAGAGAACATAAGAAGCACAAGCATCGACATAAAGACCGAAGTAAGGATAAAGACAAGGACAAGAAGAAAGACAAAAGTGGCCATCAAGAATCTGGTGCAGACCATTCGAAGAAGCATCATGAAAAGAAAAGGAAGCACGATGGAGAAGATGATATTAATGACATTCATAGGCACAAAAAAAGTAAGCATAAGACTGCAAAAATTGAAGAAATGGGAGTGATAAAGGAGGGCAAATTTATCGATTTTAGGCTATGTGGAAGCAAATGTAAAAAAAAATGGGTGGAATGA

Protein sequence

MESEDKKFGLGPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVIGDTEIRKGEGMQLNQLIQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQESGADHSKKHHEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVIKEGKFIDFRLCGSKCKKKWVE
Homology
BLAST of Sed0020139 vs. NCBI nr
Match: XP_022959852.1 (mediator of RNA polymerase II transcription subunit 19a-like [Cucurbita moschata] >KAG6593062.1 Mediator of RNA polymerase II transcription subunit 19a, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 400.6 bits (1028), Expect = 9.4e-108
Identity = 209/216 (96.76%), Postives = 212/216 (98.15%), Query Frame = 0

Query: 1   MESEDKKFGLGPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVIGDTEIRK 60
           MESEDKKFG GPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNV+GDTEIRK
Sbjct: 1   MESEDKKFGQGPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK 60

Query: 61  GEGMQLNQLIQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPSAEKGVPTIPGKSK 120
           GEGMQLNQLIQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELP AEKGVPTIPGKSK
Sbjct: 61  GEGMQLNQLIQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPPAEKGVPTIPGKSK 120

Query: 121 SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQESGADHSKKH 180
           SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKS HQ+SGADHSKKH
Sbjct: 121 SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSAHQDSGADHSKKH 180

Query: 181 HEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVIK 217
           HEKKRKHDGEDDINDIHRHKK+KHK AKIEEMGVIK
Sbjct: 181 HEKKRKHDGEDDINDIHRHKKNKHKAAKIEEMGVIK 216

BLAST of Sed0020139 vs. NCBI nr
Match: XP_023513830.1 (mediator of RNA polymerase II transcription subunit 19a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 399.8 bits (1026), Expect = 1.6e-107
Identity = 209/216 (96.76%), Postives = 212/216 (98.15%), Query Frame = 0

Query: 1   MESEDKKFGLGPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVIGDTEIRK 60
           MESEDKKFG GPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNV+GDTEIRK
Sbjct: 1   MESEDKKFGQGPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK 60

Query: 61  GEGMQLNQLIQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPSAEKGVPTIPGKSK 120
           GEGMQLNQLIQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELP AEKGVPTIPGKSK
Sbjct: 61  GEGMQLNQLIQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPPAEKGVPTIPGKSK 120

Query: 121 SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQESGADHSKKH 180
           SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKS HQ+SGADHSKKH
Sbjct: 121 SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSTHQDSGADHSKKH 180

Query: 181 HEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVIK 217
           HEKKRKHDGEDDINDIHRHKK+KHK AKIEEMGVIK
Sbjct: 181 HEKKRKHDGEDDINDIHRHKKNKHKAAKIEEMGVIK 216

BLAST of Sed0020139 vs. NCBI nr
Match: KAG7025472.1 (Mediator of RNA polymerase II transcription subunit 19a, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 399.4 bits (1025), Expect = 2.1e-107
Identity = 208/216 (96.30%), Postives = 212/216 (98.15%), Query Frame = 0

Query: 1   MESEDKKFGLGPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVIGDTEIRK 60
           MESEDKKFG GPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNV+GDTEIRK
Sbjct: 1   MESEDKKFGQGPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK 60

Query: 61  GEGMQLNQLIQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPSAEKGVPTIPGKSK 120
           GEGMQLNQLIQNPSYPRETNARIQPFD+DILIEAFQLRETGPVELP AEKGVPTIPGKSK
Sbjct: 61  GEGMQLNQLIQNPSYPRETNARIQPFDEDILIEAFQLRETGPVELPPAEKGVPTIPGKSK 120

Query: 121 SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQESGADHSKKH 180
           SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKS HQ+SGADHSKKH
Sbjct: 121 SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSAHQDSGADHSKKH 180

Query: 181 HEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVIK 217
           HEKKRKHDGEDDINDIHRHKK+KHK AKIEEMGVIK
Sbjct: 181 HEKKRKHDGEDDINDIHRHKKNKHKAAKIEEMGVIK 216

BLAST of Sed0020139 vs. NCBI nr
Match: XP_016900359.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 19a-like [Cucumis melo])

HSP 1 Score: 397.9 bits (1021), Expect = 6.1e-107
Identity = 207/216 (95.83%), Postives = 213/216 (98.61%), Query Frame = 0

Query: 1   MESEDKKFGLGPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVIGDTEIRK 60
           MESEDKKFG GPRELTGAVDLISHYKLLPHH+FFCKKSLPLSISDTHYLHNV+GDTEIRK
Sbjct: 1   MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRK 60

Query: 61  GEGMQLNQLIQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPSAEKGVPTIPGKSK 120
           GEGMQLNQLIQN SYPRETNARIQPFDQDILIEAFQLRETGPV+LPSAEKGVPTIPGKSK
Sbjct: 61  GEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSK 120

Query: 121 SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQESGADHSKKH 180
           SESKDKDRKHKKHKDRDK+KDREHKKHKHRHKDRSKDKDKDKKKDKSGHQ+SGADHSKKH
Sbjct: 121 SESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQDSGADHSKKH 180

Query: 181 HEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVIK 217
           HEKKRKHDGEDDINDIHRHKKSKHK +KIEEMGVIK
Sbjct: 181 HEKKRKHDGEDDINDIHRHKKSKHKASKIEEMGVIK 216

BLAST of Sed0020139 vs. NCBI nr
Match: XP_023004820.1 (mediator of RNA polymerase II transcription subunit 19a-like [Cucurbita maxima])

HSP 1 Score: 396.7 bits (1018), Expect = 1.4e-106
Identity = 206/216 (95.37%), Postives = 211/216 (97.69%), Query Frame = 0

Query: 1   MESEDKKFGLGPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVIGDTEIRK 60
           MESEDKKFG GPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNV+GDTEIRK
Sbjct: 1   MESEDKKFGQGPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK 60

Query: 61  GEGMQLNQLIQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPSAEKGVPTIPGKSK 120
           GEGMQLNQLIQ+PSYPRETNARIQPFDQDILIEAFQLRETGPVELP AEKGVPT+PGKSK
Sbjct: 61  GEGMQLNQLIQSPSYPRETNARIQPFDQDILIEAFQLRETGPVELPPAEKGVPTVPGKSK 120

Query: 121 SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQESGADHSKKH 180
            ESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKS HQ+SGADHSKKH
Sbjct: 121 GESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSAHQDSGADHSKKH 180

Query: 181 HEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVIK 217
           HEKKRKHDGEDDINDIHRHKK+KHK AKIEEMGVIK
Sbjct: 181 HEKKRKHDGEDDINDIHRHKKNKHKAAKIEEMGVIK 216

BLAST of Sed0020139 vs. ExPASy Swiss-Prot
Match: Q9FMP0 (Mediator of RNA polymerase II transcription subunit 19a OS=Arabidopsis thaliana OX=3702 GN=MED19A PE=1 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 1.6e-81
Identity = 164/220 (74.55%), Postives = 191/220 (86.82%), Query Frame = 0

Query: 1   MESEDKKFGLGPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVIGDTEIRK 60
           ME E  KFG GPREL GA DLIS +KL+ HHEFFCKKSLP+S+SD+HYLHNV+GDTEIRK
Sbjct: 1   MEPERLKFG-GPRELCGAADLISQFKLVQHHEFFCKKSLPVSLSDSHYLHNVVGDTEIRK 60

Query: 61  GEGMQLNQLIQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPSAEKGVPTIPGKSK 120
           GEGMQL+QLI++ S  RETN RIQPFD D L E+FQL +  PVELP AEKG PTIP KSK
Sbjct: 61  GEGMQLDQLIESISQSRETNIRIQPFDIDELQESFQLNDMTPVELPPAEKGAPTIPSKSK 120

Query: 121 SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDK----KKDKSGHQESGADH 180
           SESKD+DRKHKKHKDRDKDKDREHKKHKH+HKDRSKDKDKDK    KKDK+GH +SG DH
Sbjct: 121 SESKDRDRKHKKHKDRDKDKDREHKKHKHKHKDRSKDKDKDKDRDRKKDKNGHHDSG-DH 180

Query: 181 SKKHHEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVIK 217
           SKKHH+KKRKHDG++D+ND+ RHKK+KHK++K++E+G I+
Sbjct: 181 SKKHHDKKRKHDGDEDLNDVQRHKKNKHKSSKLDEVGAIR 218

BLAST of Sed0020139 vs. ExPASy Swiss-Prot
Match: Q6NQD9 (Probable mediator of RNA polymerase II transcription subunit 19b OS=Arabidopsis thaliana OX=3702 GN=MED19B PE=2 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 9.0e-69
Identity = 149/216 (68.98%), Postives = 177/216 (81.94%), Query Frame = 0

Query: 1   MESEDKKFGLGPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVIGDTEIRK 60
           MESE  KFG GPREL GA+DLI+ YKLLPHHEFFCK+SLP S+SD HYLHN++GDTEIRK
Sbjct: 1   MESESVKFG-GPRELGGALDLITQYKLLPHHEFFCKRSLPESLSDAHYLHNLVGDTEIRK 60

Query: 61  GEGMQLNQLIQNPSY-PRETNARIQPFDQDILIEAFQLRETGPVELPSAEKGVPTIPGKS 120
           GEGMQL+QLI N S   R+TNARIQPF  D L EAF+L +T PVELP AEKG PT   KS
Sbjct: 61  GEGMQLDQLIPNASLSSRDTNARIQPFVLDELKEAFELNDTAPVELPPAEKGAPTTVSKS 120

Query: 121 KSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQESGADHSKK 180
           KSESKDKDRKH+KHKD+ K+KDREHKKHKH+HKDR KDKDKDK +DK   ++SG      
Sbjct: 121 KSESKDKDRKHRKHKDK-KEKDREHKKHKHKHKDRIKDKDKDKDRDKK-KEKSG------ 180

Query: 181 HHEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVI 216
           HH+KKRK++G +D +D+ RHKKSKHK++K++EMG +
Sbjct: 181 HHDKKRKNNGTEDADDVQRHKKSKHKSSKLDEMGAM 207

BLAST of Sed0020139 vs. ExPASy TrEMBL
Match: A0A6J1H5Q1 (mediator of RNA polymerase II transcription subunit 19a-like OS=Cucurbita moschata OX=3662 GN=LOC111460791 PE=4 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 4.6e-108
Identity = 209/216 (96.76%), Postives = 212/216 (98.15%), Query Frame = 0

Query: 1   MESEDKKFGLGPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVIGDTEIRK 60
           MESEDKKFG GPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNV+GDTEIRK
Sbjct: 1   MESEDKKFGQGPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK 60

Query: 61  GEGMQLNQLIQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPSAEKGVPTIPGKSK 120
           GEGMQLNQLIQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELP AEKGVPTIPGKSK
Sbjct: 61  GEGMQLNQLIQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPPAEKGVPTIPGKSK 120

Query: 121 SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQESGADHSKKH 180
           SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKS HQ+SGADHSKKH
Sbjct: 121 SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSAHQDSGADHSKKH 180

Query: 181 HEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVIK 217
           HEKKRKHDGEDDINDIHRHKK+KHK AKIEEMGVIK
Sbjct: 181 HEKKRKHDGEDDINDIHRHKKNKHKAAKIEEMGVIK 216

BLAST of Sed0020139 vs. ExPASy TrEMBL
Match: A0A1S4DWJ4 (mediator of RNA polymerase II transcription subunit 19a-like OS=Cucumis melo OX=3656 GN=LOC103489709 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 3.0e-107
Identity = 207/216 (95.83%), Postives = 213/216 (98.61%), Query Frame = 0

Query: 1   MESEDKKFGLGPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVIGDTEIRK 60
           MESEDKKFG GPRELTGAVDLISHYKLLPHH+FFCKKSLPLSISDTHYLHNV+GDTEIRK
Sbjct: 1   MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRK 60

Query: 61  GEGMQLNQLIQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPSAEKGVPTIPGKSK 120
           GEGMQLNQLIQN SYPRETNARIQPFDQDILIEAFQLRETGPV+LPSAEKGVPTIPGKSK
Sbjct: 61  GEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSK 120

Query: 121 SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQESGADHSKKH 180
           SESKDKDRKHKKHKDRDK+KDREHKKHKHRHKDRSKDKDKDKKKDKSGHQ+SGADHSKKH
Sbjct: 121 SESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQDSGADHSKKH 180

Query: 181 HEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVIK 217
           HEKKRKHDGEDDINDIHRHKKSKHK +KIEEMGVIK
Sbjct: 181 HEKKRKHDGEDDINDIHRHKKSKHKASKIEEMGVIK 216

BLAST of Sed0020139 vs. ExPASy TrEMBL
Match: A0A6J1KVN1 (mediator of RNA polymerase II transcription subunit 19a-like OS=Cucurbita maxima OX=3661 GN=LOC111498006 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 6.6e-107
Identity = 206/216 (95.37%), Postives = 211/216 (97.69%), Query Frame = 0

Query: 1   MESEDKKFGLGPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVIGDTEIRK 60
           MESEDKKFG GPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNV+GDTEIRK
Sbjct: 1   MESEDKKFGQGPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK 60

Query: 61  GEGMQLNQLIQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPSAEKGVPTIPGKSK 120
           GEGMQLNQLIQ+PSYPRETNARIQPFDQDILIEAFQLRETGPVELP AEKGVPT+PGKSK
Sbjct: 61  GEGMQLNQLIQSPSYPRETNARIQPFDQDILIEAFQLRETGPVELPPAEKGVPTVPGKSK 120

Query: 121 SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQESGADHSKKH 180
            ESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKS HQ+SGADHSKKH
Sbjct: 121 GESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSAHQDSGADHSKKH 180

Query: 181 HEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVIK 217
           HEKKRKHDGEDDINDIHRHKK+KHK AKIEEMGVIK
Sbjct: 181 HEKKRKHDGEDDINDIHRHKKNKHKAAKIEEMGVIK 216

BLAST of Sed0020139 vs. ExPASy TrEMBL
Match: A0A0A0K716 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G374560 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 8.6e-107
Identity = 206/216 (95.37%), Postives = 213/216 (98.61%), Query Frame = 0

Query: 1   MESEDKKFGLGPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVIGDTEIRK 60
           MESEDKKFG GPRELTGAVDLISHYKLLPHH+FFCKKSLPLSISDTHYLHNV+GDTEIRK
Sbjct: 1   MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRK 60

Query: 61  GEGMQLNQLIQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPSAEKGVPTIPGKSK 120
           GEGMQLNQLIQN SYPRETNARIQPFDQDILIEAFQLRETGPV+LPSAEKGVPTIPGKSK
Sbjct: 61  GEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSK 120

Query: 121 SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQESGADHSKKH 180
           SESKDKDRKHKKHKDRDK+KDREHKKHKHRHKDRSKDKDKDKKK+KSGHQ+SGADHSKKH
Sbjct: 121 SESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKH 180

Query: 181 HEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVIK 217
           HEKKRKHDGEDDINDIHRHKKSKHK +KIEEMGVIK
Sbjct: 181 HEKKRKHDGEDDINDIHRHKKSKHKASKIEEMGVIK 216

BLAST of Sed0020139 vs. ExPASy TrEMBL
Match: A0A6J1CP39 (mediator of RNA polymerase II transcription subunit 19a-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013422 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 7.3e-106
Identity = 205/216 (94.91%), Postives = 211/216 (97.69%), Query Frame = 0

Query: 1   MESEDKKFGLGPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVIGDTEIRK 60
           MESEDKKFG GPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNV+GDTEIRK
Sbjct: 1   MESEDKKFGRGPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRK 60

Query: 61  GEGMQLNQLIQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPSAEKGVPTIPGKSK 120
           GEGMQLNQLIQN SYPRETNARIQPFDQDILIEAFQLRETGPV+LP AEKGVPTIPGKSK
Sbjct: 61  GEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPPAEKGVPTIPGKSK 120

Query: 121 SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQESGADHSKKH 180
           SESKDK+RKHKKHKDRDK+KDREHKKHKHRHKDRSKDKDKDKK+DKS H ESGADHSKKH
Sbjct: 121 SESKDKERKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKRDKSAHHESGADHSKKH 180

Query: 181 HEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVIK 217
           HEKKRKHDGEDDINDIHRHKKSKHKT+KIEEMGVIK
Sbjct: 181 HEKKRKHDGEDDINDIHRHKKSKHKTSKIEEMGVIK 216

BLAST of Sed0020139 vs. TAIR 10
Match: AT5G12230.1 (MED19A; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19480.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 303.9 bits (777), Expect = 1.1e-82
Identity = 164/220 (74.55%), Postives = 191/220 (86.82%), Query Frame = 0

Query: 1   MESEDKKFGLGPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVIGDTEIRK 60
           ME E  KFG GPREL GA DLIS +KL+ HHEFFCKKSLP+S+SD+HYLHNV+GDTEIRK
Sbjct: 1   MEPERLKFG-GPRELCGAADLISQFKLVQHHEFFCKKSLPVSLSDSHYLHNVVGDTEIRK 60

Query: 61  GEGMQLNQLIQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPSAEKGVPTIPGKSK 120
           GEGMQL+QLI++ S  RETN RIQPFD D L E+FQL +  PVELP AEKG PTIP KSK
Sbjct: 61  GEGMQLDQLIESISQSRETNIRIQPFDIDELQESFQLNDMTPVELPPAEKGAPTIPSKSK 120

Query: 121 SESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDK----KKDKSGHQESGADH 180
           SESKD+DRKHKKHKDRDKDKDREHKKHKH+HKDRSKDKDKDK    KKDK+GH +SG DH
Sbjct: 121 SESKDRDRKHKKHKDRDKDKDREHKKHKHKHKDRSKDKDKDKDRDRKKDKNGHHDSG-DH 180

Query: 181 SKKHHEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVIK 217
           SKKHH+KKRKHDG++D+ND+ RHKK+KHK++K++E+G I+
Sbjct: 181 SKKHHDKKRKHDGDEDLNDVQRHKKNKHKSSKLDEVGAIR 218

BLAST of Sed0020139 vs. TAIR 10
Match: AT5G19480.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 261.5 bits (667), Expect = 6.4e-70
Identity = 149/216 (68.98%), Postives = 177/216 (81.94%), Query Frame = 0

Query: 1   MESEDKKFGLGPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVIGDTEIRK 60
           MESE  KFG GPREL GA+DLI+ YKLLPHHEFFCK+SLP S+SD HYLHN++GDTEIRK
Sbjct: 1   MESESVKFG-GPRELGGALDLITQYKLLPHHEFFCKRSLPESLSDAHYLHNLVGDTEIRK 60

Query: 61  GEGMQLNQLIQNPSY-PRETNARIQPFDQDILIEAFQLRETGPVELPSAEKGVPTIPGKS 120
           GEGMQL+QLI N S   R+TNARIQPF  D L EAF+L +T PVELP AEKG PT   KS
Sbjct: 61  GEGMQLDQLIPNASLSSRDTNARIQPFVLDELKEAFELNDTAPVELPPAEKGAPTTVSKS 120

Query: 121 KSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQESGADHSKK 180
           KSESKDKDRKH+KHKD+ K+KDREHKKHKH+HKDR KDKDKDK +DK   ++SG      
Sbjct: 121 KSESKDKDRKHRKHKDK-KEKDREHKKHKHKHKDRIKDKDKDKDRDKK-KEKSG------ 180

Query: 181 HHEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVI 216
           HH+KKRK++G +D +D+ RHKKSKHK++K++EMG +
Sbjct: 181 HHDKKRKNNGTEDADDVQRHKKSKHKSSKLDEMGAM 207

BLAST of Sed0020139 vs. TAIR 10
Match: AT5G19480.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12230.1); Has 15754 Blast hits to 7644 proteins in 441 species: Archae - 6; Bacteria - 451; Metazoa - 7628; Fungi - 1448; Plants - 1196; Viruses - 38; Other Eukaryotes - 4987 (source: NCBI BLink). )

HSP 1 Score: 261.5 bits (667), Expect = 6.4e-70
Identity = 149/216 (68.98%), Postives = 177/216 (81.94%), Query Frame = 0

Query: 1   MESEDKKFGLGPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVIGDTEIRK 60
           MESE  KFG GPREL GA+DLI+ YKLLPHHEFFCK+SLP S+SD HYLHN++GDTEIRK
Sbjct: 1   MESESVKFG-GPRELGGALDLITQYKLLPHHEFFCKRSLPESLSDAHYLHNLVGDTEIRK 60

Query: 61  GEGMQLNQLIQNPSY-PRETNARIQPFDQDILIEAFQLRETGPVELPSAEKGVPTIPGKS 120
           GEGMQL+QLI N S   R+TNARIQPF  D L EAF+L +T PVELP AEKG PT   KS
Sbjct: 61  GEGMQLDQLIPNASLSSRDTNARIQPFVLDELKEAFELNDTAPVELPPAEKGAPTTVSKS 120

Query: 121 KSESKDKDRKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQESGADHSKK 180
           KSESKDKDRKH+KHKD+ K+KDREHKKHKH+HKDR KDKDKDK +DK   ++SG      
Sbjct: 121 KSESKDKDRKHRKHKDK-KEKDREHKKHKHKHKDRIKDKDKDKDRDKK-KEKSG------ 180

Query: 181 HHEKKRKHDGEDDINDIHRHKKSKHKTAKIEEMGVI 216
           HH+KKRK++G +D +D+ RHKKSKHK++K++EMG +
Sbjct: 181 HHDKKRKNNGTEDADDVQRHKKSKHKSSKLDEMGAM 207

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022959852.19.4e-10896.76mediator of RNA polymerase II transcription subunit 19a-like [Cucurbita moschata... [more]
XP_023513830.11.6e-10796.76mediator of RNA polymerase II transcription subunit 19a-like [Cucurbita pepo sub... [more]
KAG7025472.12.1e-10796.30Mediator of RNA polymerase II transcription subunit 19a, partial [Cucurbita argy... [more]
XP_016900359.16.1e-10795.83PREDICTED: mediator of RNA polymerase II transcription subunit 19a-like [Cucumis... [more]
XP_023004820.11.4e-10695.37mediator of RNA polymerase II transcription subunit 19a-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Q9FMP01.6e-8174.55Mediator of RNA polymerase II transcription subunit 19a OS=Arabidopsis thaliana ... [more]
Q6NQD99.0e-6968.98Probable mediator of RNA polymerase II transcription subunit 19b OS=Arabidopsis ... [more]
Match NameE-valueIdentityDescription
A0A6J1H5Q14.6e-10896.76mediator of RNA polymerase II transcription subunit 19a-like OS=Cucurbita moscha... [more]
A0A1S4DWJ43.0e-10795.83mediator of RNA polymerase II transcription subunit 19a-like OS=Cucumis melo OX=... [more]
A0A6J1KVN16.6e-10795.37mediator of RNA polymerase II transcription subunit 19a-like OS=Cucurbita maxima... [more]
A0A0A0K7168.6e-10795.37Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G374560 PE=4 SV=1[more]
A0A6J1CP397.3e-10694.91mediator of RNA polymerase II transcription subunit 19a-like isoform X2 OS=Momor... [more]
Match NameE-valueIdentityDescription
AT5G12230.11.1e-8274.55MED19A; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19... [more]
AT5G19480.16.4e-7068.98unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G19480.26.4e-7068.98unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019403Mediator complex, subunit Med19, metazoaPFAMPF10278Med19coord: 12..171
e-value: 1.8E-7
score: 31.2
IPR019403Mediator complex, subunit Med19, metazoaPANTHERPTHR22536LUNG CANCER METASTASIS-RELATED LCMR1 PROTEINcoord: 1..216
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..208
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..157
NoneNo IPR availablePANTHERPTHR22536:SF4MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 19A-LIKE ISOFORM X1coord: 1..216

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0020139.1Sed0020139.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006777 Mo-molybdopterin cofactor biosynthetic process
biological_process GO:0045944 positive regulation of transcription by RNA polymerase II
biological_process GO:0006357 regulation of transcription by RNA polymerase II
cellular_component GO:0016592 mediator complex
cellular_component GO:0019008 molybdopterin synthase complex
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0061798 GTP 3',8'-cyclase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003712 transcription coregulator activity