Sed0020003 (gene) Chayote v1

Overview
NameSed0020003
Typegene
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
LocationLG08: 40026520 .. 40027262 (+)
RNA-Seq ExpressionSed0020003
SyntenySed0020003
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGCTCCAACAAAACAATGGGCTGCTAACGCGGCTTCTCTAACAGCCCCTCCAACAAAGTTCTTGCGACGAATGGCATTTCGAGCCACTCATTTCCAAACAATTGTCCAATTCGAATGAACCCAACGCCCCCAAAACGACTCTTTATATACAATTACAACTGCCCTTTCTCTGCCACAAAAAAAAAAAAAGCTTTCTTTCACCCAAAATGGGGTTGAAGTGGATTCTGAATTCTGCTCTTGTTCAGGTTCTGGGGCTCAAACACCATCAGAATTTGGAGGATCAGAAACGGGAGGAGGGAGATTGTTGCTATGAAAGTGGGTTTCAAATGCCGCTTCATTATCCCAGGTACACAAAGCAAGACTATGAGAAAATGGAGGAGACCAGGTTGGATTTGCTTCTGAAACAATATGGACTCTGTTTTGATGGTACCCTTGAGGAGAAAAGGGAATTTGCTGCTGGGGCGTTCTTGTGGCCTGACCAACTTTGAATTCACCCACCAGCTGTTTGATGAAATGCCCATATGAAAAAAAAAAAATAGCTCCATTTTATCGTGTAATTTCGAAATTTGGTGTCTGTAGTTATGGATGTGATGTCAGTTTAAGATGCAGGGATATTAGTAACTGTATCTTTTTTCTATTTTGTACGAAGCTTTGTTAAAGCTGTATCTGCTAATATTGGTGGAATCTTAAGTGTCTTGTATAAACCTTGCTAGTTGTTACATATAATATAATGGTGTATGTT

mRNA sequence

CAGCTCCAACAAAACAATGGGCTGCTAACGCGGCTTCTCTAACAGCCCCTCCAACAAAGTTCTTGCGACGAATGGCATTTCGAGCCACTCATTTCCAAACAATTGTCCAATTCGAATGAACCCAACGCCCCCAAAACGACTCTTTATATACAATTACAACTGCCCTTTCTCTGCCACAAAAAAAAAAAAAGCTTTCTTTCACCCAAAATGGGGTTGAAGTGGATTCTGAATTCTGCTCTTGTTCAGGTTCTGGGGCTCAAACACCATCAGAATTTGGAGGATCAGAAACGGGAGGAGGGAGATTGTTGCTATGAAAGTGGGTTTCAAATGCCGCTTCATTATCCCAGGTACACAAAGCAAGACTATGAGAAAATGGAGGAGACCAGGTTGGATTTGCTTCTGAAACAATATGGACTCTGTTTTGATGGTACCCTTGAGGAGAAAAGGGAATTTGCTGCTGGGGCGTTCTTGTGGCCTGACCAACTTTGAATTCACCCACCAGCTGTTTGATGAAATGCCCATATGAAAAAAAAAAAATAGCTCCATTTTATCGTGTAATTTCGAAATTTGGTGTCTGTAGTTATGGATGTGATGTCAGTTTAAGATGCAGGGATATTAGTAACTGTATCTTTTTTCTATTTTGTACGAAGCTTTGTTAAAGCTGTATCTGCTAATATTGGTGGAATCTTAAGTGTCTTGTATAAACCTTGCTAGTTGTTACATATAATATAATGGTGTATGTT

Coding sequence (CDS)

ATGGGGTTGAAGTGGATTCTGAATTCTGCTCTTGTTCAGGTTCTGGGGCTCAAACACCATCAGAATTTGGAGGATCAGAAACGGGAGGAGGGAGATTGTTGCTATGAAAGTGGGTTTCAAATGCCGCTTCATTATCCCAGGTACACAAAGCAAGACTATGAGAAAATGGAGGAGACCAGGTTGGATTTGCTTCTGAAACAATATGGACTCTGTTTTGATGGTACCCTTGAGGAGAAAAGGGAATTTGCTGCTGGGGCGTTCTTGTGGCCTGACCAACTTTGA

Protein sequence

MGLKWILNSALVQVLGLKHHQNLEDQKREEGDCCYESGFQMPLHYPRYTKQDYEKMEETRLDLLLKQYGLCFDGTLEEKREFAAGAFLWPDQL
Homology
[Close]
BLAST of Sed0020003 vs. NCBI nr
Match: XP_038904207.1 (uncharacterized protein LOC120090553 [Benincasa hispida])

HSP 1 Score: 141.7 bits (356), Expect = 3.1e-30
Identity = 73/109 (66.97%), Postives = 78/109 (71.56%), Query Frame = 0 

Query: 1   MGLKWILNSALVQVLGL---KHHQNLE--------DQKREEGDCCY-----ESGFQMPLH 60
           MGLKWILNSA  QVLGL   + H   E        +Q +E  DC Y     ESGFQMPLH
Sbjct: 1   MGLKWILNSAFTQVLGLTDKQQHNQKEAGEGIENVEQVKEAQDCFYGGLNFESGFQMPLH 60

Query: 61  YPRYTKQDYEKMEETRLDLLLKQYGLCFDGTLEEKREFAAGAFLWPDQL 94
           YPRYTK+DYEKMEE +LDLLLKQYGLCFDGTLEEKR F  G FLWPDQL
Sbjct: 61  YPRYTKEDYEKMEEGKLDLLLKQYGLCFDGTLEEKRAFTIGTFLWPDQL 109

[Close]
BLAST of Sed0020003 vs. NCBI nr
Match: KAA0065725.1 (uncharacterized protein E6C27_scaffold37G00120 [Cucumis melo var. makuwa] >TYK13751.1 uncharacterized protein E5676_scaffold488G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 141.4 bits (355), Expect = 4.1e-30
Identity = 74/111 (66.67%), Postives = 80/111 (72.07%), Query Frame = 0 

Query: 1   MGLKWILNSALVQVLGL--KHHQNLE----------DQKREEGDCCY------ESGFQMP 60
           MGLKWILNSA  QVLGL  K  QN +          +Q +E  DC Y      ESGFQMP
Sbjct: 1   MGLKWILNSAFTQVLGLTEKQQQNQKEAGGEGIKNVEQVKEGRDCFYGGGLNFESGFQMP 60

Query: 61  LHYPRYTKQDYEKMEETRLDLLLKQYGLCFDGTLEEKREFAAGAFLWPDQL 94
           LHYPRYTK+DYE+MEE +LDLLLKQYGLCFDGTLEEKR FA G FLWPDQL
Sbjct: 61  LHYPRYTKRDYEEMEEGKLDLLLKQYGLCFDGTLEEKRAFAIGTFLWPDQL 111

[Close]
BLAST of Sed0020003 vs. NCBI nr
Match: XP_008449025.1 (PREDICTED: uncharacterized protein LOC103491021 [Cucumis melo])

HSP 1 Score: 140.2 bits (352), Expect = 9.0e-30
Identity = 74/111 (66.67%), Postives = 80/111 (72.07%), Query Frame = 0 

Query: 1   MGLKWILNSALVQVLGL--KHHQNLE----------DQKREEGDCCY------ESGFQMP 60
           MGLKWILNSA  QVLGL  K  QN +          +Q +E  DC Y      ESGFQMP
Sbjct: 1   MGLKWILNSAFTQVLGLTEKLQQNQKEAGGEGIKNVEQVKEGRDCFYGGGLNFESGFQMP 60

Query: 61  LHYPRYTKQDYEKMEETRLDLLLKQYGLCFDGTLEEKREFAAGAFLWPDQL 94
           LHYPRYTK+DYE+MEE +LDLLLKQYGLCFDGTLEEKR FA G FLWPDQL
Sbjct: 61  LHYPRYTKRDYEEMEEGKLDLLLKQYGLCFDGTLEEKRAFAIGTFLWPDQL 111

[Close]
BLAST of Sed0020003 vs. NCBI nr
Match: XP_011650470.1 (uncharacterized protein LOC105434788 [Cucumis sativus] >KGN56014.1 hypothetical protein Csa_011328 [Cucumis sativus])

HSP 1 Score: 139.4 bits (350), Expect = 1.5e-29
Identity = 72/111 (64.86%), Postives = 80/111 (72.07%), Query Frame = 0 

Query: 1   MGLKWILNSALVQVLGL--KHHQNLE----------DQKREEGDCCY------ESGFQMP 60
           MGLKWILNSA  QVLGL  K  QN +          +Q +E  DC Y      +SGFQMP
Sbjct: 1   MGLKWILNSAFTQVLGLTEKQQQNQKEAGGEGIKNVEQVKEGRDCFYGGDLNFQSGFQMP 60

Query: 61  LHYPRYTKQDYEKMEETRLDLLLKQYGLCFDGTLEEKREFAAGAFLWPDQL 94
           LHYPRYTK+DYE+MEE +LDLLLKQYGLCFDGTLEEKR FA G F+WPDQL
Sbjct: 61  LHYPRYTKRDYEEMEEGKLDLLLKQYGLCFDGTLEEKRAFAIGTFIWPDQL 111

[Close]
BLAST of Sed0020003 vs. NCBI nr
Match: XP_022965232.1 (uncharacterized protein LOC111465146 [Cucurbita maxima])

HSP 1 Score: 138.3 bits (347), Expect = 3.4e-29
Identity = 73/109 (66.97%), Postives = 78/109 (71.56%), Query Frame = 0 

Query: 1   MGLKWILNSALVQVLGL--KHHQNLE---------DQKREEGDCCY-----ESGFQMPLH 60
           MGLKWILNSA  QVLGL  K H+N           +Q +E  DC Y     ESGFQMPLH
Sbjct: 1   MGLKWILNSAFTQVLGLTEKQHRNQNEAGEGIKNVEQVKEAEDCFYGGLNFESGFQMPLH 60

Query: 61  YPRYTKQDYEKMEETRLDLLLKQYGLCFDGTLEEKREFAAGAFLWPDQL 94
           YPRYTK DYEKMEE +LDLLLKQYGL F+GTLEEKR FA G FLWPDQL
Sbjct: 61  YPRYTKADYEKMEEGKLDLLLKQYGLRFEGTLEEKRAFAIGTFLWPDQL 109

[Close]
BLAST of Sed0020003 vs. ExPASy TrEMBL
Match: A0A5D3CPN0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00090 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.0e-30
Identity = 74/111 (66.67%), Postives = 80/111 (72.07%), Query Frame = 0 

Query: 1   MGLKWILNSALVQVLGL--KHHQNLE----------DQKREEGDCCY------ESGFQMP 60
           MGLKWILNSA  QVLGL  K  QN +          +Q +E  DC Y      ESGFQMP
Sbjct: 1   MGLKWILNSAFTQVLGLTEKQQQNQKEAGGEGIKNVEQVKEGRDCFYGGGLNFESGFQMP 60

Query: 61  LHYPRYTKQDYEKMEETRLDLLLKQYGLCFDGTLEEKREFAAGAFLWPDQL 94
           LHYPRYTK+DYE+MEE +LDLLLKQYGLCFDGTLEEKR FA G FLWPDQL
Sbjct: 61  LHYPRYTKRDYEEMEEGKLDLLLKQYGLCFDGTLEEKRAFAIGTFLWPDQL 111

[Close]
BLAST of Sed0020003 vs. ExPASy TrEMBL
Match: A0A1S3BM13 (uncharacterized protein LOC103491021 OS=Cucumis melo OX=3656 GN=LOC103491021 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 4.4e-30
Identity = 74/111 (66.67%), Postives = 80/111 (72.07%), Query Frame = 0 

Query: 1   MGLKWILNSALVQVLGL--KHHQNLE----------DQKREEGDCCY------ESGFQMP 60
           MGLKWILNSA  QVLGL  K  QN +          +Q +E  DC Y      ESGFQMP
Sbjct: 1   MGLKWILNSAFTQVLGLTEKLQQNQKEAGGEGIKNVEQVKEGRDCFYGGGLNFESGFQMP 60

Query: 61  LHYPRYTKQDYEKMEETRLDLLLKQYGLCFDGTLEEKREFAAGAFLWPDQL 94
           LHYPRYTK+DYE+MEE +LDLLLKQYGLCFDGTLEEKR FA G FLWPDQL
Sbjct: 61  LHYPRYTKRDYEEMEEGKLDLLLKQYGLCFDGTLEEKRAFAIGTFLWPDQL 111

[Close]
BLAST of Sed0020003 vs. ExPASy TrEMBL
Match: A0A0A0L4U1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G047750 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 7.5e-30
Identity = 72/111 (64.86%), Postives = 80/111 (72.07%), Query Frame = 0 

Query: 1   MGLKWILNSALVQVLGL--KHHQNLE----------DQKREEGDCCY------ESGFQMP 60
           MGLKWILNSA  QVLGL  K  QN +          +Q +E  DC Y      +SGFQMP
Sbjct: 1   MGLKWILNSAFTQVLGLTEKQQQNQKEAGGEGIKNVEQVKEGRDCFYGGDLNFQSGFQMP 60

Query: 61  LHYPRYTKQDYEKMEETRLDLLLKQYGLCFDGTLEEKREFAAGAFLWPDQL 94
           LHYPRYTK+DYE+MEE +LDLLLKQYGLCFDGTLEEKR FA G F+WPDQL
Sbjct: 61  LHYPRYTKRDYEEMEEGKLDLLLKQYGLCFDGTLEEKRAFAIGTFIWPDQL 111

[Close]
BLAST of Sed0020003 vs. ExPASy TrEMBL
Match: A0A6J1HJS9 (uncharacterized protein LOC111465146 OS=Cucurbita maxima OX=3661 GN=LOC111465146 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.7e-29
Identity = 73/109 (66.97%), Postives = 78/109 (71.56%), Query Frame = 0 

Query: 1   MGLKWILNSALVQVLGL--KHHQNLE---------DQKREEGDCCY-----ESGFQMPLH 60
           MGLKWILNSA  QVLGL  K H+N           +Q +E  DC Y     ESGFQMPLH
Sbjct: 1   MGLKWILNSAFTQVLGLTEKQHRNQNEAGEGIKNVEQVKEAEDCFYGGLNFESGFQMPLH 60

Query: 61  YPRYTKQDYEKMEETRLDLLLKQYGLCFDGTLEEKREFAAGAFLWPDQL 94
           YPRYTK DYEKMEE +LDLLLKQYGL F+GTLEEKR FA G FLWPDQL
Sbjct: 61  YPRYTKADYEKMEEGKLDLLLKQYGLRFEGTLEEKRAFAIGTFLWPDQL 109

[Close]
BLAST of Sed0020003 vs. ExPASy TrEMBL
Match: A0A6J1DL49 (uncharacterized protein LOC111021455 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021455 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.2e-29
Identity = 71/110 (64.55%), Postives = 77/110 (70.00%), Query Frame = 0 

Query: 1   MGLKWILNSALVQVLGLKHHQ-----------NLEDQKREEGDCCYE------SGFQMPL 60
           MGLKWILNSA +QVLGL   Q           N++ +K EE D  Y+       GF+MPL
Sbjct: 1   MGLKWILNSAFMQVLGLTEKQXNQEEAREGIKNVKKEKEEEEDSYYDGGLNFSGGFRMPL 60

Query: 61  HYPRYTKQDYEKMEETRLDLLLKQYGLCFDGTLEEKREFAAGAFLWPDQL 94
           HYPRYTK DYEKMEE  LDLLLKQYGLCFDGTLEEKR FA G FLWPDQL
Sbjct: 61  HYPRYTKGDYEKMEEPCLDLLLKQYGLCFDGTLEEKRAFAIGTFLWPDQL 110

[Close]
BLAST of Sed0020003 vs. TAIR 10
Match: AT5G55620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 101.3 bits (251), Expect = 4.3e-22
Identity = 50/105 (47.62%), Postives = 68/105 (64.76%), Query Frame = 0 

Query: 1   MGLKWILNSALVQVLGLKHHQN------------LEDQKREEGDCCYESGFQMPLHYPRY 60
           M +K +  SA  Q+ G  +H +            ++  K+EE    + SGFQ+PLHYP+Y
Sbjct: 1   MEMKLLFTSAFTQMFGYSNHMDQASNCQSTRNKIIKMMKKEE----FPSGFQVPLHYPKY 60

Query: 61  TKQDYEKMEETRLDLLLKQYGLCFDGTLEEKREFAAGAFLWPDQL 94
           +K DYE M++ RLDLLLKQYG  F+G+LE+KR FA  +FLWPDQL
Sbjct: 61  SKSDYEVMDDLRLDLLLKQYGFSFEGSLEDKRVFAIESFLWPDQL 101

[Close]
BLAST of Sed0020003 vs. TAIR 10
Match: AT3G09950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 86.7 bits (213), Expect = 1.1e-17
Identity = 44/88 (50.00%), Postives = 57/88 (64.77%), Query Frame = 0 

Query: 5  WILNSALVQVLGLKHHQNLEDQKREEGDCCYESGFQMPLHYPRYTKQDYEKMEETRLDLL 64
          W+LN     +   K+ +++E+  +        SGF+MPLHYPRYTK+DYE+MEE RLDLL
Sbjct: 6  WLLNF----LNHAKNQESVENLDKNGAVKAPSSGFKMPLHYPRYTKEDYEEMEEWRLDLL 65

Query: 65 LKQYGLC--FDGTLEEKREFAAGAFLWP 91
          L +YGL    D TL EKR FA   F+WP
Sbjct: 66 LSEYGLLAFHDNTLHEKRAFAIDTFIWP 89

[Close]
BLAST of Sed0020003 vs. TAIR 10
Match: AT5G41761.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 81.3 bits (199), Expect = 4.6e-16
Identity = 41/82 (50.00%), Postives = 51/82 (62.20%), Query Frame = 0 

Query: 18 KHHQNLEDQKREEGDCC-------YESGFQMPLHYPRYTKQDYEKMEETRLDLLLKQYGL 77
          + HQ+ EDQ+ E              S FQ+PLHYP+YTK DYEKM E +LD LL++YGL
Sbjct: 17 RSHQDGEDQRNETATKINHDKPQNQSSSFQIPLHYPKYTKSDYEKMPEWQLDRLLREYGL 76

Query: 78 CFDGTLEEKREFAAGAFLWPDQ 93
             G   EKR+FA GAFLW  +
Sbjct: 77 PVIGDSYEKRKFAIGAFLWSSE 98

[Close]
BLAST of Sed0020003 vs. TAIR 10
Match: AT3G55570.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 73.9 bits (180), Expect = 7.4e-14
Identity = 36/70 (51.43%), Postives = 47/70 (67.14%), Query Frame = 0 

Query: 20 HQNLEDQKREEGDCCYESGFQMPLHYPRYTKQDYEKMEETRLDLLLKQYGLCFDGTLEEK 79
          + ++E+ K  EG     S F+MPLHYPRY+K+DY+ M E +LD +L  YGL   G L  K
Sbjct: 18 YMDVENGKNGEG-----SVFRMPLHYPRYSKEDYQDMPEWKLDRVLADYGLSTYGDLAHK 77

Query: 80 REFAAGAFLW 90
          R+FA GAFLW
Sbjct: 78 RDFAIGAFLW 82

[Close]
BLAST of Sed0020003 vs. TAIR 10
Match: AT3G11405.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 67.4 bits (163), Expect = 6.9e-12
Identity = 37/83 (44.58%), Postives = 47/83 (56.63%), Query Frame = 0 

Query: 12  VQVLGLKHHQNLEDQKREEGDCCY----ESGFQMPLHYPRYTKQDYEKMEETRLDLLLKQ 71
           + V+G K   +  D + ++    +     S FQMPL YP Y K+ Y+ M E  LD LLK 
Sbjct: 26  IDVVGKKTSNSSSDNESDQFASLFGSSSPSSFQMPLQYPNYAKEQYDIMSEEELDRLLKL 85

Query: 72  YGLCFD-GTLEEKREFAAGAFLW 90
           YGL  D G L  K+EFA GAFLW
Sbjct: 86  YGLPTDIGNLSCKKEFAVGAFLW 108

The following BLAST results are available for this feature:
BLAST of Sed0020003 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038904207.13.1e-3066.97uncharacterized protein LOC120090553 [Benincasa hispida][more]
KAA0065725.14.1e-3066.67uncharacterized protein E6C27_scaffold37G00120 [Cucumis melo var. makuwa] >TYK13... [more]
XP_008449025.19.0e-3066.67PREDICTED: uncharacterized protein LOC103491021 [Cucumis melo][more]
XP_011650470.11.5e-2964.86uncharacterized protein LOC105434788 [Cucumis sativus] >KGN56014.1 hypothetical ... [more]
XP_022965232.13.4e-2966.97uncharacterized protein LOC111465146 [Cucurbita maxima][more]
BLAST of Sed0020003 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sed0020003 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CPN02.0e-3066.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BM134.4e-3066.67uncharacterized protein LOC103491021 OS=Cucumis melo OX=3656 GN=LOC103491021 PE=... [more]
A0A0A0L4U17.5e-3064.86Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G047750 PE=4 SV=1[more]
A0A6J1HJS91.7e-2966.97uncharacterized protein LOC111465146 OS=Cucurbita maxima OX=3661 GN=LOC111465146... [more]
A0A6J1DL492.2e-2964.55uncharacterized protein LOC111021455 isoform X1 OS=Momordica charantia OX=3673 G... [more]
BLAST of Sed0020003 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G55620.14.3e-2247.62unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G09950.11.1e-1750.00unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G41761.14.6e-1650.00unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G55570.17.4e-1451.43unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G11405.16.9e-1244.58unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33513:SF2SUBFAMILY NOT NAMEDcoord: 19..93
NoneNo IPR availablePANTHERPTHR33513OS06G0523300 PROTEINcoord: 19..93

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0020003.1Sed0020003.1mRNA