Sed0019359 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCACATTTCCCAATACCTCACATTATTTCTCTCTCTCAATTAGACTTTTTATTTTCCTTTACCAAATTGGCGCATTATGCAACAAGCAATTCCCTACAGATCGTGGGCTCCGACCGCCGTGTCCTCCGCCGCCGGGGCGGCGGTAAGCGTCGAGAAATTGGTATCCAAGAACGCCGTGGTGGTTCTGGCGAGGCGTGGTTGCTGTATGAGCCACGTCTTGAAATTGCTGCTGTTGGGCCACGGCGCGAACCCGGCCGTGTTCGCCGTCGGCGAGGAGGAGGAAGTTGAAATTTCCGGCGAGATTCGGAAATTTGCCGCCGGAGATGCAGATGGGGGCGACGGAATTGTGCAGTTTCCGGTGGTGTTTGTCGGCGGGAAGATGTTAGGTGGGTTGGAAAAAGTGATGGCGGCTCATATTTCCGGCGAATTGGTGCCGGCGTTAAAAGATGCCGGTGCTTTGTGGCTTTAAATTAAATGAATCCCCCAGGGGAATTCAATTTTTAAATAATGTGAATTGTATTGTTTGATTATTGAATTCTCTATGTGCATCATTTAATTTGGCATACTAATAGAGGGACATTATGTATTAGACAGTAGATCTCAAATTAATCATGTATTAGACAGTAATTACCGTCCAAATTCCAAATGCTTGTTTGTTTTGTGAGTTACAACAATTGTGGGAGAGGGGATTTAAACCCCGTGACCTCTTAATCAACGAGTGTACCAGATGTCGTTGAACTACCGCTCTTATTGGCTGTTTGTTTGTTTTTAATGGTGCCACGAATTGTAATTTTTGTATTTGAAATTGCCCTTTGAAATCTGGTACCACGAATTAGGTAGCCCAAGGACACTCAAGATCTTGTAAATTATTTTGTATTTTCGCAATTATTATGATTCCATGAAACCTAATTTACTAAATATCTACATTTGTTAGCAAGTATATATACCATGCTTCATGACTAAAATTGATTGTTTGATCTTTCA CCACATTTCCCAATACCTCACATTATTTCTCTCTCTCAATTAGACTTTTTATTTTCCTTTACCAAATTGGCGCATTATGCAACAAGCAATTCCCTACAGATCGTGGGCTCCGACCGCCGTGTCCTCCGCCGCCGGGGCGGCGGTAAGCGTCGAGAAATTGGTATCCAAGAACGCCGTGGTGGTTCTGGCGAGGCGTGGTTGCTGTATGAGCCACGTCTTGAAATTGCTGCTGTTGGGCCACGGCGCGAACCCGGCCGTGTTCGCCGTCGGCGAGGAGGAGGAAGTTGAAATTTCCGGCGAGATTCGGAAATTTGCCGCCGGAGATGCAGATGGGGGCGACGGAATTGTGCAGTTTCCGGTGGTGTTTGTCGGCGGGAAGATGTTAGGTGGGTTGGAAAAAGTGATGGCGGCTCATATTTCCGGCGAATTGGTGCCGGCGTTAAAAGATGCCGGTGCTTTGTGGCTTTAAATTAAATGAATCCCCCAGGGGAATTCAATTTTTAAATAATGTGAATTGTATTGTTTGATTATTGAATTCTCTATGTGCATCATTTAATTTGGCATACTAATAGAGGGACATTATGTATTAGACAGTAGATCTCAAATTAATCATGTATTAGACAGTAATTACCGTCCAAATTCCAAATGCTTGTTTGTTTTGTGAGTTACAACAATTGTGGGAGAGGGGATTTAAACCCCGTGACCTCTTAATCAACGAGTGTACCAGATGTCGTTGAACTACCGCTCTTATTGGCTGTTTGTTTGTTTTTAATGGTGCCACGAATTGTAATTTTTGTATTTGAAATTGCCCTTTGAAATCTGGTACCACGAATTAGGTAGCCCAAGGACACTCAAGATCTTGTAAATTATTTTGTATTTTCGCAATTATTATGATTCCATGAAACCTAATTTACTAAATATCTACATTTGTTAGCAAGTATATATACCATGCTTCATGACTAAAATTGATTGTTTGATCTTTCA ATGCAACAAGCAATTCCCTACAGATCGTGGGCTCCGACCGCCGTGTCCTCCGCCGCCGGGGCGGCGGTAAGCGTCGAGAAATTGGTATCCAAGAACGCCGTGGTGGTTCTGGCGAGGCGTGGTTGCTGTATGAGCCACGTCTTGAAATTGCTGCTGTTGGGCCACGGCGCGAACCCGGCCGTGTTCGCCGTCGGCGAGGAGGAGGAAGTTGAAATTTCCGGCGAGATTCGGAAATTTGCCGCCGGAGATGCAGATGGGGGCGACGGAATTGTGCAGTTTCCGGTGGTGTTTGTCGGCGGGAAGATGTTAGGTGGGTTGGAAAAAGTGATGGCGGCTCATATTTCCGGCGAATTGGTGCCGGCGTTAAAAGATGCCGGTGCTTTGTGGCTTTAA MQQAIPYRSWAPTAVSSAAGAAVSVEKLVSKNAVVVLARRGCCMSHVLKLLLLGHGANPAVFAVGEEEEVEISGEIRKFAAGDADGGDGIVQFPVVFVGGKMLGGLEKVMAAHISGELVPALKDAGALWL Homology
BLAST of Sed0019359 vs. NCBI nr
Match: XP_022978780.1 (glutaredoxin-C9-like [Cucurbita maxima]) HSP 1 Score: 203.8 bits (517), Expect = 9.3e-49 Identity = 108/137 (78.83%), Postives = 113/137 (82.48%), Query Frame = 0
BLAST of Sed0019359 vs. NCBI nr
Match: XP_023543691.1 (glutaredoxin-C9-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 202.6 bits (514), Expect = 2.1e-48 Identity = 108/137 (78.83%), Postives = 113/137 (82.48%), Query Frame = 0
BLAST of Sed0019359 vs. NCBI nr
Match: XP_038881313.1 (glutaredoxin-C9-like [Benincasa hispida]) HSP 1 Score: 201.4 bits (511), Expect = 4.6e-48 Identity = 106/134 (79.10%), Postives = 113/134 (84.33%), Query Frame = 0
BLAST of Sed0019359 vs. NCBI nr
Match: XP_022926101.1 (monothiol glutaredoxin-S9-like [Cucurbita moschata] >KAG6581333.1 Glutaredoxin-C9, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034617.1 Glutaredoxin-C9, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 201.1 bits (510), Expect = 6.0e-48 Identity = 107/137 (78.10%), Postives = 112/137 (81.75%), Query Frame = 0
BLAST of Sed0019359 vs. NCBI nr
Match: XP_023003328.1 (glutaredoxin-C9-like [Cucurbita maxima]) HSP 1 Score: 197.2 bits (500), Expect = 8.7e-47 Identity = 105/132 (79.55%), Postives = 111/132 (84.09%), Query Frame = 0
BLAST of Sed0019359 vs. ExPASy Swiss-Prot
Match: Q9SGP6 (Glutaredoxin-C9 OS=Arabidopsis thaliana OX=3702 GN=GRXC9 PE=1 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 3.0e-26 Identity = 59/111 (53.15%), Postives = 75/111 (67.57%), Query Frame = 0
BLAST of Sed0019359 vs. ExPASy Swiss-Prot
Match: Q0JP62 (Monothiol glutaredoxin-S3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS3 PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 8.2e-24 Identity = 63/131 (48.09%), Postives = 85/131 (64.89%), Query Frame = 0
BLAST of Sed0019359 vs. ExPASy Swiss-Prot
Match: P0C291 (Monothiol glutaredoxin-S9 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS9 PE=3 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 9.1e-23 Identity = 69/143 (48.25%), Postives = 85/143 (59.44%), Query Frame = 0
BLAST of Sed0019359 vs. ExPASy Swiss-Prot
Match: Q84TF4 (Monothiol glutaredoxin-S13 OS=Arabidopsis thaliana OX=3702 GN=GRXS13 PE=2 SV=2) HSP 1 Score: 101.7 bits (252), Expect = 6.5e-21 Identity = 58/123 (47.15%), Postives = 76/123 (61.79%), Query Frame = 0
BLAST of Sed0019359 vs. ExPASy Swiss-Prot
Match: Q5QLR2 (Monothiol glutaredoxin-S5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS5 PE=2 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 3.2e-20 Identity = 66/157 (42.04%), Postives = 81/157 (51.59%), Query Frame = 0
BLAST of Sed0019359 vs. ExPASy TrEMBL
Match: A0A6J1IR73 (glutaredoxin-C9-like OS=Cucurbita maxima OX=3661 GN=LOC111478640 PE=3 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 4.5e-49 Identity = 108/137 (78.83%), Postives = 113/137 (82.48%), Query Frame = 0
BLAST of Sed0019359 vs. ExPASy TrEMBL
Match: A0A6J1EDX5 (monothiol glutaredoxin-S9-like OS=Cucurbita moschata OX=3662 GN=LOC111433316 PE=3 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 2.9e-48 Identity = 107/137 (78.10%), Postives = 112/137 (81.75%), Query Frame = 0
BLAST of Sed0019359 vs. ExPASy TrEMBL
Match: A0A6J1KW71 (glutaredoxin-C9-like OS=Cucurbita maxima OX=3661 GN=LOC111496967 PE=3 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 4.2e-47 Identity = 105/132 (79.55%), Postives = 111/132 (84.09%), Query Frame = 0
BLAST of Sed0019359 vs. ExPASy TrEMBL
Match: A0A6J1EFS2 (glutaredoxin-C9-like OS=Cucurbita moschata OX=3662 GN=LOC111433778 PE=3 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 7.2e-47 Identity = 106/132 (80.30%), Postives = 110/132 (83.33%), Query Frame = 0
BLAST of Sed0019359 vs. ExPASy TrEMBL
Match: U3RBI2 (Glutaredoxin OS=Cucumis sativus OX=3659 GN=GRX1 PE=2 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 1.2e-46 Identity = 105/134 (78.36%), Postives = 112/134 (83.58%), Query Frame = 0
BLAST of Sed0019359 vs. TAIR 10
Match: AT1G28480.1 (Thioredoxin superfamily protein ) HSP 1 Score: 119.4 bits (298), Expect = 2.2e-27 Identity = 59/111 (53.15%), Postives = 75/111 (67.57%), Query Frame = 0
BLAST of Sed0019359 vs. TAIR 10
Match: AT1G03850.2 (Glutaredoxin family protein ) HSP 1 Score: 101.7 bits (252), Expect = 4.6e-22 Identity = 58/123 (47.15%), Postives = 76/123 (61.79%), Query Frame = 0
BLAST of Sed0019359 vs. TAIR 10
Match: AT5G14070.1 (Thioredoxin superfamily protein ) HSP 1 Score: 90.5 bits (223), Expect = 1.1e-18 Identity = 48/107 (44.86%), Postives = 66/107 (61.68%), Query Frame = 0
BLAST of Sed0019359 vs. TAIR 10
Match: AT3G02000.1 (Thioredoxin superfamily protein ) HSP 1 Score: 84.7 bits (208), Expect = 5.9e-17 Identity = 47/108 (43.52%), Postives = 66/108 (61.11%), Query Frame = 0
BLAST of Sed0019359 vs. TAIR 10
Match: AT4G15690.1 (Thioredoxin superfamily protein ) HSP 1 Score: 84.3 bits (207), Expect = 7.7e-17 Identity = 45/107 (42.06%), Postives = 69/107 (64.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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