Sed0019252 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCAATTGTTATATAATTAATTATTTAATAATTTATAAATAATTATATTTAGACATTCATTTAAAGTATTTAAAATGGGATATATTTGTTTAATAATTATTAAAAAAAAAATAGACATTTTTCGTAGTTGTCCTATTTTGTGAATTTCCCACGACTTTCGATTGGGCATATAAATAAAGAAAAAAATTTGCGGTGTGGAGTTGAGTTTCAAGTTTCAGCCATTTCAAACCAAAAATGGAGGCGATCACATACCAGAGGATGAAGCCCCGGCGGCGGTCCCACGGCACCGGCTTCCGCCTCAACTCGAGAAGATTCAGCGTCTCCAAGCTGCGGCCCAAGTTCGTGTGGCTCTTCACCATCTTAACCCGATGCCGCCGCTTCTATTCCCGGACCTTGAGCTCCATCAACAAGCGCCGGACATCCACTGCTTCTTCGAGATCCACCGCCGCCGATCGAGGCGAGTGCAGGCTCAGATCCTTCCGCCGCTCCAACTCTTTCTACGCCGAAGCCATTGCCGACTGCTTGGATTTCATCAAGAGATCATCATCATCCGCCTCTCTTTCTGCTGATCGCCCGCCCAGTCAACCCACCGTTCAATTTCTTCACCCTTCTTCTACCTAACATTTTGTTTATAAAAAAACATTGTTCATAAATATTTCTCTTTCCTATTATATTTGTTGTTGTTTTGTTTGTTTGTCTGTAAGATTCAAAATGGCA GTCAATTGTTATATAATTAATTATTTAATAATTTATAAATAATTATATTTAGACATTCATTTAAAGTATTTAAAATGGGATATATTTGTTTAATAATTATTAAAAAAAAAATAGACATTTTTCGTAGTTGTCCTATTTTGTGAATTTCCCACGACTTTCGATTGGGCATATAAATAAAGAAAAAAATTTGCGGTGTGGAGTTGAGTTTCAAGTTTCAGCCATTTCAAACCAAAAATGGAGGCGATCACATACCAGAGGATGAAGCCCCGGCGGCGGTCCCACGGCACCGGCTTCCGCCTCAACTCGAGAAGATTCAGCGTCTCCAAGCTGCGGCCCAAGTTCGTGTGGCTCTTCACCATCTTAACCCGATGCCGCCGCTTCTATTCCCGGACCTTGAGCTCCATCAACAAGCGCCGGACATCCACTGCTTCTTCGAGATCCACCGCCGCCGATCGAGGCGAGTGCAGGCTCAGATCCTTCCGCCGCTCCAACTCTTTCTACGCCGAAGCCATTGCCGACTGCTTGGATTTCATCAAGAGATCATCATCATCCGCCTCTCTTTCTGCTGATCGCCCGCCCAGTCAACCCACCGTTCAATTTCTTCACCCTTCTTCTACCTAACATTTTGTTTATAAAAAAACATTGTTCATAAATATTTCTCTTTCCTATTATATTTGTTGTTGTTTTGTTTGTTTGTCTGTAAGATTCAAAATGGCA ATGGAGGCGATCACATACCAGAGGATGAAGCCCCGGCGGCGGTCCCACGGCACCGGCTTCCGCCTCAACTCGAGAAGATTCAGCGTCTCCAAGCTGCGGCCCAAGTTCGTGTGGCTCTTCACCATCTTAACCCGATGCCGCCGCTTCTATTCCCGGACCTTGAGCTCCATCAACAAGCGCCGGACATCCACTGCTTCTTCGAGATCCACCGCCGCCGATCGAGGCGAGTGCAGGCTCAGATCCTTCCGCCGCTCCAACTCTTTCTACGCCGAAGCCATTGCCGACTGCTTGGATTTCATCAAGAGATCATCATCATCCGCCTCTCTTTCTGCTGATCGCCCGCCCAGTCAACCCACCGTTCAATTTCTTCACCCTTCTTCTACCTAA MEAITYQRMKPRRRSHGTGFRLNSRRFSVSKLRPKFVWLFTILTRCRRFYSRTLSSINKRRTSTASSRSTAADRGECRLRSFRRSNSFYAEAIADCLDFIKRSSSSASLSADRPPSQPTVQFLHPSST Homology
BLAST of Sed0019252 vs. NCBI nr
Match: KAG6596289.1 (hypothetical protein SDJN03_09469, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 130.6 bits (327), Expect = 9.9e-27 Identity = 83/139 (59.71%), Postives = 96/139 (69.06%), Query Frame = 0
BLAST of Sed0019252 vs. NCBI nr
Match: KAG7027838.1 (hypothetical protein SDJN02_09015, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 130.6 bits (327), Expect = 9.9e-27 Identity = 83/139 (59.71%), Postives = 96/139 (69.06%), Query Frame = 0
BLAST of Sed0019252 vs. NCBI nr
Match: KAE8637405.1 (hypothetical protein CSA_023382 [Cucumis sativus] >KGN55589.1 hypothetical protein Csa_011775 [Cucumis sativus]) HSP 1 Score: 97.8 bits (242), Expect = 7.1e-17 Identity = 67/123 (54.47%), Postives = 80/123 (65.04%), Query Frame = 0
BLAST of Sed0019252 vs. NCBI nr
Match: KAA0052904.1 (hypothetical protein E6C27_scaffold344G00100 [Cucumis melo var. makuwa] >TYK11358.1 hypothetical protein E5676_scaffold139G00100 [Cucumis melo var. makuwa]) HSP 1 Score: 97.1 bits (240), Expect = 1.2e-16 Identity = 67/123 (54.47%), Postives = 79/123 (64.23%), Query Frame = 0
BLAST of Sed0019252 vs. NCBI nr
Match: XP_022158286.1 (uncharacterized protein LOC111024807 [Momordica charantia]) HSP 1 Score: 96.7 bits (239), Expect = 1.6e-16 Identity = 71/133 (53.38%), Postives = 83/133 (62.41%), Query Frame = 0
BLAST of Sed0019252 vs. ExPASy TrEMBL
Match: A0A0A0L3I7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G000130 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 3.4e-17 Identity = 67/123 (54.47%), Postives = 80/123 (65.04%), Query Frame = 0
BLAST of Sed0019252 vs. ExPASy TrEMBL
Match: A0A5A7UC85 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00100 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 5.8e-17 Identity = 67/123 (54.47%), Postives = 79/123 (64.23%), Query Frame = 0
BLAST of Sed0019252 vs. ExPASy TrEMBL
Match: A0A6J1E0I4 (uncharacterized protein LOC111024807 OS=Momordica charantia OX=3673 GN=LOC111024807 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 7.6e-17 Identity = 71/133 (53.38%), Postives = 83/133 (62.41%), Query Frame = 0
BLAST of Sed0019252 vs. ExPASy TrEMBL
Match: A0A2N9J454 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60148 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 6.1e-14 Identity = 56/111 (50.45%), Postives = 70/111 (63.06%), Query Frame = 0
BLAST of Sed0019252 vs. ExPASy TrEMBL
Match: B9SRA4 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0612990 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 3.0e-13 Identity = 51/105 (48.57%), Postives = 70/105 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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