Sed0018752 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTTAAGGAAGCGCATCGGTAATGGCCAGAACTCCTTTGTGTTTAAATCTCCTTGGATTCCAAGAGAGAACACTTTTCGGGCAATTTCACCTCATTGCCCAAGCATTAGTGGCATTCATGTTTGTGAATTCATTACTACAGATGGAGATTGGGATCAGGAGCTCCTTTCTGCTTTCCTTTGGAGGGAAGATGTAGAGTGCATTTGTTCAATTTCTATTTGCAAATCCTATGAAGAGGATAAATGGATTTGGCACTACTCAAAGGATGGAGATTTCTCGGTTAGAAGTGCTCACTGGCTGCTTAGACATAATTTTTTTGAAGCCTCTAGGGTAAATGGTGGGTCAAGTGAAGCTTGGTGGAAGAGTCTTTGGAACCTTAAAGTTCCAAATAAGTTGAAGCTTTTCATGTGGAGACTCTATCATGAATTTCTACCAACCAACCTTGTGTTATAAAAAAGAAAGGTTCCTGTTCAGCCTTGGTGTGTGATGTGTGGAAATTTTTATGAATCATTTTTCCATATATTTTATGCCTCTGGTCAATTTGGATCAATCAAAATAAAGTAAATTTTAATGAGGTTGTCCCCCCAGTTAATGTTCGAATTGAATGGATTCGTCAGTATTTGGAGGATTTTTTGAAATCTAATGATATGGAATCCCATAAGCATGCTGAGTATGATTCTTGCTCTGTTGTTGCTCCTATTCGTTGGATTGCGCCATGGCCGGGATTTCTCAAGCTTAATGTCGATGCTTCATGTTCCCCTTTAGCGCCGAAATTGGGGTTTGAATTAATTTTCAGAGATCACATGGGATTATGCAAATTTGCTTCTTCCATTTTCAAACCTGTGTTTTGTGATATCCTCTTAGCGGAAGCTTTGGCTTTGTTGGAGGGATTGAAGGTGGCTGATAATCTTGGATTCCATAATTTGATTATTGAATCTGATTCAAAGACACTTGTCGATGCTATTCTAGGGAATCATTTATCTCTTTCTCCTCAAGGTATTATCCTTGATGAAATTCGTCTGCTGCTAAAGAAATATGGCTCAAAAACTGTTTGTTTCATCCCTCGAAAATGTAATAGTGTTGCTCATAACTTAGCATCTCGGGCAGTTTTTGTAGGCCTTAATGGTTGCTGGAGTAGTATTTTGCCACATTGGCTTTCTGATTTGGTCAATCTGGACCTTTCTAATTGTAGCCCTTTGGGTTTTTCTGATATTGGTTAATAAAAATCCTGCTTTCTTTCAAAAAAATTCTAGCCACGACGTTATTTTCTCCAGAATCCCTCTTCGTCAAGAACACCATCGCCTCGCACCAGGCCATTATCTTCTCCAAGTCCTCTTTGGCAGGTTTTGCAAAAATGACAAGGTTTACTGAAGTTACACCTAGGCTTGGACAACTAAAACAACATCAATCCGGGCAATTATGAAACTGTGCAGTAATATACTCTGAAAGATCCAATTTTTCACCACGAACACATGCTAGGCTGCCATAGATACCGATAACTACGCTCGTACGTATGAACAGAATACCTAACATAAATACTAATGATTTGATTATAGACTTGTTGACAGGGTGACAAATATAAATGCTTGGCCAAAAAAGCAC ATGGGTTTAAGGAAGCGCATCGGTAATGGCCAGAACTCCTTTGTGTTTAAATCTCCTTGGATTCCAAGAGAGAACACTTTTCGGGCAATTTCACCTCATTGCCCAAGCATTAGTGGCATTCATGTTTGTGAATTCATTACTACAGATGGAGATTGGGATCAGGAGCTCCTTTCTGCTTTCCTTTGGAGGGAAGATGTAGAGTGCATTTGTTCAATTTCTATTTGCAAATCCTATGAAGAGGATAAATGGATTTGGCACTACTCAAAGGATGGAGATTTCTCGGTTAGAAGTGCTCACTGGCTGCTTAGACATAATTTTTTTGAAGCCTCTAGGGTAAATGGTGGGTCAAGTGAAGCTTGGTGGAAGAGTCTTTGGAACCTTAAAGTTGTCCCCCCAGTTAATGTTCGAATTGAATGGATTCGTCAGTATTTGGAGGATTTTTTGAAATCTAATGATATGGAATCCCATAAGCATGCTGAGTATGATTCTTGCTCTGTTGTTGCTCCTATTCGTTGGATTGCGCCATGGCCGGGATTTCTCAAGCTTAATGTCGATGCTTCATGTTCCCCTTTAGCGCCGAAATTGGGGTTTGAATTAATTTTCAGAGATCACATGGGATTATGCAAATTTGCTTCTTCCATTTTCAAACCTGTGTTTTGTGATATCCTCTTAGCGGAAGCTTTGGCTTTGTTGGAGGGATTGAAGGTGGCTGATAATCTTGGATTCCATAATTTGATTATTGAATCTGATTCAAAGACACTTGTCGATGCTATTCTAGGGAATCATTTATCTCTTTCTCCTCAAGGTATTATCCTTGATGAAATTCGTCTGCTGCTAAAGAAATATGGCTCAAAAACTGTTTGTTTCATCCCTCGAAAATGTAATAGTGTTGCTCATAACTTAGCATCTCGGGCAGTTTTTGTAGGCCTTAATGGTTGCTGGAGTAGTATTTTGCCACATTGGCTTTCTGATTTGGTCAATCTGGACCTTTCTAATTGTAGCCCTTTGGGTTTTTCTGATATTGGTTAATAAAAATCCTGCTTTCTTTCAAAAAAATTCTAGCCACGACGTTATTTTCTCCAGAATCCCTCTTCGTCAAGAACACCATCGCCTCGCACCAGGCCATTATCTTCTCCAAGTCCTCTTTGGCAGGTTTTGCAAAAATGACAAGGTTTACTGAAGTTACACCTAGGCTTGGACAACTAAAACAACATCAATCCGGGCAATTATGAAACTGTGCAGTAATATACTCTGAAAGATCCAATTTTTCACCACGAACACATGCTAGGCTGCCATAGATACCGATAACTACGCTCGTACGTATGAACAGAATACCTAACATAAATACTAATGATTTGATTATAGACTTGTTGACAGGGTGACAAATATAAATGCTTGGCCAAAAAAGCAC ATGGGTTTAAGGAAGCGCATCGGTAATGGCCAGAACTCCTTTGTGTTTAAATCTCCTTGGATTCCAAGAGAGAACACTTTTCGGGCAATTTCACCTCATTGCCCAAGCATTAGTGGCATTCATGTTTGTGAATTCATTACTACAGATGGAGATTGGGATCAGGAGCTCCTTTCTGCTTTCCTTTGGAGGGAAGATGTAGAGTGCATTTGTTCAATTTCTATTTGCAAATCCTATGAAGAGGATAAATGGATTTGGCACTACTCAAAGGATGGAGATTTCTCGGTTAGAAGTGCTCACTGGCTGCTTAGACATAATTTTTTTGAAGCCTCTAGGGTAAATGGTGGGTCAAGTGAAGCTTGGTGGAAGAGTCTTTGGAACCTTAAAGTTGTCCCCCCAGTTAATGTTCGAATTGAATGGATTCGTCAGTATTTGGAGGATTTTTTGAAATCTAATGATATGGAATCCCATAAGCATGCTGAGTATGATTCTTGCTCTGTTGTTGCTCCTATTCGTTGGATTGCGCCATGGCCGGGATTTCTCAAGCTTAATGTCGATGCTTCATGTTCCCCTTTAGCGCCGAAATTGGGGTTTGAATTAATTTTCAGAGATCACATGGGATTATGCAAATTTGCTTCTTCCATTTTCAAACCTGTGTTTTGTGATATCCTCTTAGCGGAAGCTTTGGCTTTGTTGGAGGGATTGAAGGTGGCTGATAATCTTGGATTCCATAATTTGATTATTGAATCTGATTCAAAGACACTTGTCGATGCTATTCTAGGGAATCATTTATCTCTTTCTCCTCAAGGTATTATCCTTGATGAAATTCGTCTGCTGCTAAAGAAATATGGCTCAAAAACTGTTTGTTTCATCCCTCGAAAATGTAATAGTGTTGCTCATAACTTAGCATCTCGGGCAGTTTTTGTAGGCCTTAATGGTTGCTGGAGTAGTATTTTGCCACATTGGCTTTCTGATTTGGTCAATCTGGACCTTTCTAATTGTAGCCCTTTGGGTTTTTCTGATATTGGTTAA MGLRKRIGNGQNSFVFKSPWIPRENTFRAISPHCPSISGIHVCEFITTDGDWDQELLSAFLWREDVECICSISICKSYEEDKWIWHYSKDGDFSVRSAHWLLRHNFFEASRVNGGSSEAWWKSLWNLKVVPPVNVRIEWIRQYLEDFLKSNDMESHKHAEYDSCSVVAPIRWIAPWPGFLKLNVDASCSPLAPKLGFELIFRDHMGLCKFASSIFKPVFCDILLAEALALLEGLKVADNLGFHNLIIESDSKTLVDAILGNHLSLSPQGIILDEIRLLLKKYGSKTVCFIPRKCNSVAHNLASRAVFVGLNGCWSSILPHWLSDLVNLDLSNCSPLGFSDIG Homology
BLAST of Sed0018752 vs. NCBI nr
Match: XP_012836236.1 (PREDICTED: uncharacterized protein LOC105956874 [Erythranthe guttata]) HSP 1 Score: 147.9 bits (372), Expect = 1.6e-31 Identity = 107/352 (30.40%), Postives = 172/352 (48.86%), Query Frame = 0
BLAST of Sed0018752 vs. NCBI nr
Match: XP_028125150.1 (uncharacterized protein LOC114322087 [Camellia sinensis]) HSP 1 Score: 144.4 bits (363), Expect = 1.8e-30 Identity = 103/351 (29.34%), Postives = 162/351 (46.15%), Query Frame = 0
BLAST of Sed0018752 vs. NCBI nr
Match: XP_012847426.1 (PREDICTED: uncharacterized protein LOC105967373 [Erythranthe guttata]) HSP 1 Score: 143.3 bits (360), Expect = 3.9e-30 Identity = 114/410 (27.80%), Postives = 174/410 (42.44%), Query Frame = 0
BLAST of Sed0018752 vs. NCBI nr
Match: KAF4371092.1 (hypothetical protein F8388_020819 [Cannabis sativa]) HSP 1 Score: 135.6 bits (340), Expect = 8.2e-28 Identity = 89/294 (30.27%), Postives = 146/294 (49.66%), Query Frame = 0
BLAST of Sed0018752 vs. NCBI nr
Match: XP_023897447.1 (uncharacterized protein LOC112009345 [Quercus suber]) HSP 1 Score: 131.3 bits (329), Expect = 1.5e-26 Identity = 95/371 (25.61%), Postives = 163/371 (43.94%), Query Frame = 0
BLAST of Sed0018752 vs. ExPASy TrEMBL
Match: A0A7J6FK63 (RNase H domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_020819 PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 4.0e-28 Identity = 89/294 (30.27%), Postives = 146/294 (49.66%), Query Frame = 0
BLAST of Sed0018752 vs. ExPASy TrEMBL
Match: M5VP36 (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa014760mg PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 2.0e-27 Identity = 116/429 (27.04%), Postives = 173/429 (40.33%), Query Frame = 0
BLAST of Sed0018752 vs. ExPASy TrEMBL
Match: A0A803NS66 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 1.7e-26 Identity = 105/386 (27.20%), Postives = 170/386 (44.04%), Query Frame = 0
BLAST of Sed0018752 vs. ExPASy TrEMBL
Match: A0A7J6GEF1 (RNase H domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_009591 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 6.3e-26 Identity = 76/278 (27.34%), Postives = 136/278 (48.92%), Query Frame = 0
BLAST of Sed0018752 vs. ExPASy TrEMBL
Match: A0A803NG99 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 9.1e-25 Identity = 96/369 (26.02%), Postives = 154/369 (41.73%), Query Frame = 0
BLAST of Sed0018752 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 53.9 bits (128), Expect = 2.9e-07 Identity = 29/83 (34.94%), Postives = 46/83 (55.42%), Query Frame = 0
BLAST of Sed0018752 vs. TAIR 10
Match: AT4G09490.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 48.1 bits (113), Expect = 1.6e-05 Identity = 31/84 (36.90%), Postives = 45/84 (53.57%), Query Frame = 0
BLAST of Sed0018752 vs. TAIR 10
Match: AT2G22440.1 (BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT4G29090.1); Has 208 Blast hits to 191 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 46.6 bits (109), Expect = 4.7e-05 Identity = 26/90 (28.89%), Postives = 46/90 (51.11%), Query Frame = 0
BLAST of Sed0018752 vs. TAIR 10
Match: AT5G38920.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 45.4 bits (106), Expect = 1.0e-04 Identity = 34/110 (30.91%), Postives = 56/110 (50.91%), Query Frame = 0
BLAST of Sed0018752 vs. TAIR 10
Match: AT1G10000.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 44.7 bits (104), Expect = 1.8e-04 Identity = 32/89 (35.96%), Postives = 52/89 (58.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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