Sed0018113 (gene) Chayote v1

Overview


Name	Sed0018113
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RING-H2 finger protein ATL13
Location	LG03: 45897732 .. 45898780 (-)
RNA-Seq Expression	Sed0018113
Synteny	Sed0018113

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CACTTTCAACCTTTTAACCCTCATCCATGGCCAGTTTCTCAAACCCCATTTCTCCGCCGCCGGAGCTCCGATCAGCCGGCGGTTTCGCCTTAGACTACGAAGTCAGCCCCACGATCCTCTTATCCATCATCATCCTCGCCATAATCTTCTTCTTCGCCGGCCTCCTCCACCTCCTCCTCCGCCTCTTCCTCCGCCCCCAACTCAGAACAGAGCATGAAGACTCCGCCGTCGACGGTGGCGCCGCCTCCGCCTTCCAAGGCCAACTCCGGCAGCTCTTCCACCTCCACGACGCCGGCGTCGACCAGACCTTCATCGACGCCCTCCCCGTTTTCCCTTACAAAGCCATCCTCGGCCCCAAATTACCACACCCTTTCGATTGCTCTGTTTGTCTCTCGGAATTTCAGCCGGACGATAAGCTCCGATTGCTGACGCAATGCAGCCACGCTTTCCACATGGAGTGCATCGACACTTGGCTTTTGACCCATTCCACTTGCCCGCTCTGCCGTGCGAGCTTGATCTCAGATTTCGGAGTCCTTGATTCTGCGGGTAACAGCTCGAGAGAAATTGGGGAAATTCCGGGCGGTTCGTTTCTGGGTTTCCCCGGAGACGGGTGGGACTCGGCCGAATCGAAACGGGAGGACGGGGCGGTGGTGGCGATCAAATTGGGGAAGTTTCAGAGCTTGGAGAGAAGCGGAGAAGGGAGCAGCAATGGGAACGGGAATGTGGATGATTCGAGGAGGTGCTTTTCAATGGGGTCGTTTGGGTATGTAATGGAGGAGAATTGGTCTCTGCAAGTTCCGGTGACGGCGAGGGAGCTGGCGAGAAGGGCGGTTTCGTTTCATTTTCCGGCGAACGGGAACCGACCCAGATCGGAAAATGGGGTGGGGACGATGGATGAGGAGAATCAGAGGAGGGATAGTTTTGAATTGGTTGATCGGAATGAGGGGTCGTTTGTGAGAAGAACGTTGCAGAGGTTGCTGGGGAAGAACACCAGCAATAGGATTGTTCATTCATCTTTTACACCCAATCATCATCATTCTCATTCTTGA

mRNA sequence

CACTTTCAACCTTTTAACCCTCATCCATGGCCAGTTTCTCAAACCCCATTTCTCCGCCGCCGGAGCTCCGATCAGCCGGCGGTTTCGCCTTAGACTACGAAGTCAGCCCCACGATCCTCTTATCCATCATCATCCTCGCCATAATCTTCTTCTTCGCCGGCCTCCTCCACCTCCTCCTCCGCCTCTTCCTCCGCCCCCAACTCAGAACAGAGCATGAAGACTCCGCCGTCGACGGTGGCGCCGCCTCCGCCTTCCAAGGCCAACTCCGGCAGCTCTTCCACCTCCACGACGCCGGCGTCGACCAGACCTTCATCGACGCCCTCCCCGTTTTCCCTTACAAAGCCATCCTCGGCCCCAAATTACCACACCCTTTCGATTGCTCTGTTTGTCTCTCGGAATTTCAGCCGGACGATAAGCTCCGATTGCTGACGCAATGCAGCCACGCTTTCCACATGGAGTGCATCGACACTTGGCTTTTGACCCATTCCACTTGCCCGCTCTGCCGTGCGAGCTTGATCTCAGATTTCGGAGTCCTTGATTCTGCGGGTAACAGCTCGAGAGAAATTGGGGAAATTCCGGGCGGTTCGTTTCTGGGTTTCCCCGGAGACGGGTGGGACTCGGCCGAATCGAAACGGGAGGACGGGGCGGTGGTGGCGATCAAATTGGGGAAGTTTCAGAGCTTGGAGAGAAGCGGAGAAGGGAGCAGCAATGGGAACGGGAATGTGGATGATTCGAGGAGGTGCTTTTCAATGGGGTCGTTTGGGTATGTAATGGAGGAGAATTGGTCTCTGCAAGTTCCGGTGACGGCGAGGGAGCTGGCGAGAAGGGCGGTTTCGTTTCATTTTCCGGCGAACGGGAACCGACCCAGATCGGAAAATGGGGTGGGGACGATGGATGAGGAGAATCAGAGGAGGGATAGTTTTGAATTGGTTGATCGGAATGAGGGGTCGTTTGTGAGAAGAACGTTGCAGAGGTTGCTGGGGAAGAACACCAGCAATAGGATTGTTCATTCATCTTTTACACCCAATCATCATCATTCTCATTCTTGA

Coding sequence (CDS)

ATGGCCAGTTTCTCAAACCCCATTTCTCCGCCGCCGGAGCTCCGATCAGCCGGCGGTTTCGCCTTAGACTACGAAGTCAGCCCCACGATCCTCTTATCCATCATCATCCTCGCCATAATCTTCTTCTTCGCCGGCCTCCTCCACCTCCTCCTCCGCCTCTTCCTCCGCCCCCAACTCAGAACAGAGCATGAAGACTCCGCCGTCGACGGTGGCGCCGCCTCCGCCTTCCAAGGCCAACTCCGGCAGCTCTTCCACCTCCACGACGCCGGCGTCGACCAGACCTTCATCGACGCCCTCCCCGTTTTCCCTTACAAAGCCATCCTCGGCCCCAAATTACCACACCCTTTCGATTGCTCTGTTTGTCTCTCGGAATTTCAGCCGGACGATAAGCTCCGATTGCTGACGCAATGCAGCCACGCTTTCCACATGGAGTGCATCGACACTTGGCTTTTGACCCATTCCACTTGCCCGCTCTGCCGTGCGAGCTTGATCTCAGATTTCGGAGTCCTTGATTCTGCGGGTAACAGCTCGAGAGAAATTGGGGAAATTCCGGGCGGTTCGTTTCTGGGTTTCCCCGGAGACGGGTGGGACTCGGCCGAATCGAAACGGGAGGACGGGGCGGTGGTGGCGATCAAATTGGGGAAGTTTCAGAGCTTGGAGAGAAGCGGAGAAGGGAGCAGCAATGGGAACGGGAATGTGGATGATTCGAGGAGGTGCTTTTCAATGGGGTCGTTTGGGTATGTAATGGAGGAGAATTGGTCTCTGCAAGTTCCGGTGACGGCGAGGGAGCTGGCGAGAAGGGCGGTTTCGTTTCATTTTCCGGCGAACGGGAACCGACCCAGATCGGAAAATGGGGTGGGGACGATGGATGAGGAGAATCAGAGGAGGGATAGTTTTGAATTGGTTGATCGGAATGAGGGGTCGTTTGTGAGAAGAACGTTGCAGAGGTTGCTGGGGAAGAACACCAGCAATAGGATTGTTCATTCATCTTTTACACCCAATCATCATCATTCTCATTCTTGA

Protein sequence

MASFSNPISPPPELRSAGGFALDYEVSPTILLSIIILAIIFFFAGLLHLLLRLFLRPQLRTEHEDSAVDGGAASAFQGQLRQLFHLHDAGVDQTFIDALPVFPYKAILGPKLPHPFDCSVCLSEFQPDDKLRLLTQCSHAFHMECIDTWLLTHSTCPLCRASLISDFGVLDSAGNSSREIGEIPGGSFLGFPGDGWDSAESKREDGAVVAIKLGKFQSLERSGEGSSNGNGNVDDSRRCFSMGSFGYVMEENWSLQVPVTARELARRAVSFHFPANGNRPRSENGVGTMDEENQRRDSFELVDRNEGSFVRRTLQRLLGKNTSNRIVHSSFTPNHHHSHS

Homology

[Close]

BLAST of Sed0018113 vs. NCBI nr
Match: KAA0048645.1 (RING-H2 finger protein ATL13 [Cucumis melo var. makuwa] >TYK10846.1 RING-H2 finger protein ATL13 [Cucumis melo var. makuwa])

HSP 1 Score: 430.3 bits (1105), Expect = 1.6e-116
Identity = 259/432 (59.95%), Postives = 286/432 (66.20%), Query Frame = 0


Query: 1   MASFSNPIS------PPPELRSAGGFALDYEVSPTILLSIIILAIIFFFAGLLHLLLRLF 60
           MA+ S PIS      P PE +S GGF LD EVSPTILL+IIILAIIFFF+GLLHLLLR F
Sbjct: 1   MATPSQPISNLPLPPPSPETQSDGGFNLDSEVSPTILLAIIILAIIFFFSGLLHLLLRFF 60

Query: 61  LRPQLRTEHEDSAVDGGAASAFQGQLRQLFHLHDAGVDQTFIDALPVFPYKAILGPKLPH 120
            +PQ+RT+ EDS    G ASAFQGQLRQLFHLHDAGVDQ+FID LPVF YKAI+G KL  
Sbjct: 61  HKPQIRTDLEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL-D 120

Query: 121 PFDCSVCLSEFQPDDKLRLLTQCSHAFHMECIDTWLLTHSTCPLCRASLISDF------- 180
           PFDCSVCL EFQP+DKLRLLT+CSHAFHM+CIDTWLLTHSTCPLCRASL+SDF       
Sbjct: 121 PFDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGF 180

Query: 181 -----GVLDSAGNSSREIGEIPGGSFLGFPGDGWDSAESKRED----GA--VVAIKLGKF 240
                GVL+SA NSSREIGE+  GSFLGF GD  D  E K E+    GA  VV IKLGKF
Sbjct: 181 SSPIVGVLESASNSSREIGEVHTGSFLGFLGDVSDFTELKTEEPPATGAETVVPIKLGKF 240

Query: 241 QSLERSGEGSSNGNGNVDDSRRCFSMGSFGYVMEENWSLQVPV----------------- 300
           ++LE +GEGSSN NGNV  SRRCFSMGSFGYVM+EN SLQVP+                 
Sbjct: 241 KNLESNGEGSSN-NGNV-GSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKPVRKKKDLPL 300

Query: 301 ---------------------------------------------------TARELARRA 341
                                                                 +L RRA
Sbjct: 301 MLGSRAAISECDCESRRDFNFEELSGRVESFRHGNSKDSCEEKVAGAGDRLPVMDLTRRA 360

[Close]

BLAST of Sed0018113 vs. NCBI nr
Match: XP_008452317.1 (PREDICTED: RING-H2 finger protein ATL13 [Cucumis melo])

HSP 1 Score: 429.9 bits (1104), Expect = 2.1e-116
Identity = 259/432 (59.95%), Postives = 286/432 (66.20%), Query Frame = 0


Query: 1   MASFSNPIS------PPPELRSAGGFALDYEVSPTILLSIIILAIIFFFAGLLHLLLRLF 60
           MA+ S PIS      P PE +S GGF LD EVSPTILL+IIILAIIFFF+GLLHLLLR F
Sbjct: 1   MATPSQPISNLSLPPPSPETQSDGGFNLDSEVSPTILLAIIILAIIFFFSGLLHLLLRFF 60

Query: 61  LRPQLRTEHEDSAVDGGAASAFQGQLRQLFHLHDAGVDQTFIDALPVFPYKAILGPKLPH 120
            +PQ+RT+ EDS    G ASAFQGQLRQLFHLHDAGVDQ+FID LPVF YKAI+G KL  
Sbjct: 61  HKPQIRTDLEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL-D 120

Query: 121 PFDCSVCLSEFQPDDKLRLLTQCSHAFHMECIDTWLLTHSTCPLCRASLISDF------- 180
           PFDCSVCL EFQP+DKLRLLT+CSHAFHM+CIDTWLLTHSTCPLCRASL+SDF       
Sbjct: 121 PFDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAISGGF 180

Query: 181 -----GVLDSAGNSSREIGEIPGGSFLGFPGDGWDSAESKRED----GA--VVAIKLGKF 240
                GVL+SA NSSREIGE+  GSFLGF GD  D  E K E+    GA  VV IKLGKF
Sbjct: 181 SSPIVGVLESASNSSREIGEVHTGSFLGFLGDVSDFTELKTEEPPATGAETVVPIKLGKF 240

Query: 241 QSLERSGEGSSNGNGNVDDSRRCFSMGSFGYVMEENWSLQVPV----------------- 300
           ++LE +GEGSSN NGNV  SRRCFSMGSFGYVM+EN SLQVP+                 
Sbjct: 241 KNLECNGEGSSN-NGNV-GSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKPVRKKKDLPL 300

Query: 301 ---------------------------------------------------TARELARRA 341
                                                                 +L RRA
Sbjct: 301 MLGSRAAISECDCESRRDFNFEELSGRVESFRHGNSKDSCEEKVAGTGDRLPVMDLTRRA 360

[Close]

BLAST of Sed0018113 vs. NCBI nr
Match: XP_004149099.1 (RING-H2 finger protein ATL13 [Cucumis sativus] >KGN61088.1 hypothetical protein Csa_021137 [Cucumis sativus])

HSP 1 Score: 427.2 bits (1097), Expect = 1.4e-115
Identity = 257/432 (59.49%), Postives = 285/432 (65.97%), Query Frame = 0


Query: 1   MASFSNPIS------PPPELRSAGGFALDYEVSPTILLSIIILAIIFFFAGLLHLLLRLF 60
           MA+ S PIS      P P+ +S GGF LD EVSPTILL+IIILAIIFFF+GLLHLLLR F
Sbjct: 1   MATLSQPISNFPLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFF 60

Query: 61  LRPQLRTEHEDSAVDGGAASAFQGQLRQLFHLHDAGVDQTFIDALPVFPYKAILGPKLPH 120
            +PQ+RT+ EDS    G ASAFQGQLRQLFHLHDAGVDQ+FID LPVF YKAI+G KL  
Sbjct: 61  HKPQIRTDPEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL-D 120

Query: 121 PFDCSVCLSEFQPDDKLRLLTQCSHAFHMECIDTWLLTHSTCPLCRASLISDF------- 180
           PFDCSVCL EFQP+DKLRLLT+CSHAFHM+CIDTWLLTHSTCPLCRASL+SDF       
Sbjct: 121 PFDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGF 180

Query: 181 -----GVLDSAGNSSREIGEIPGGSFLGFPGDGWDSAESKRED----GA--VVAIKLGKF 240
                GVL+SA NSSREIGE+  GSFLGF GD  D  E K E+    GA  VV IKLGKF
Sbjct: 181 SSPIVGVLESASNSSREIGEVHTGSFLGFLGDVSDFTELKTEEPPATGAETVVPIKLGKF 240

Query: 241 QSLERSGEGSSNGNGNVDDSRRCFSMGSFGYVMEENWSLQVP------------------ 300
           ++LE +GEGSSN N NV  SRRCFSMGSFGYVM+EN SLQVP                  
Sbjct: 241 KNLESNGEGSSN-NSNV-GSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKQVRKKKDLPL 300

Query: 301 --------------------------------------------------VTARELARRA 341
                                                             V   +L+RRA
Sbjct: 301 MLGSRAAISECDCESRREFNFEELSGRVESFRHGNSKDSCEEKVAGAGDRVAVMDLSRRA 360

[Close]

BLAST of Sed0018113 vs. NCBI nr
Match: XP_038890570.1 (RING-H2 finger protein ATL13-like [Benincasa hispida])

HSP 1 Score: 426.4 bits (1095), Expect = 2.3e-115
Identity = 259/436 (59.40%), Postives = 286/436 (65.60%), Query Frame = 0


Query: 1   MASFSNPIS-------PPPELRSAGGFALDYEVSPTILLSIIILAIIFFFAGLLHLLLRL 60
           MA+ S PIS       P PE ++ GG +LD EVSPTILL+IIILAIIFFF+GLLHLLLR 
Sbjct: 1   MATLSQPISKLPLPPPPLPETQADGGLSLDNEVSPTILLAIIILAIIFFFSGLLHLLLRF 60

Query: 61  FLRPQLRTEHEDSAVDGGAASAFQGQLRQLFHLHDAGVDQTFIDALPVFPYKAILGPKLP 120
             +PQ+RT+ EDSAVDGG ASAFQGQLRQLFHLHDAGVDQ+FID LPVF YKAI+G KL 
Sbjct: 61  LHKPQIRTDPEDSAVDGG-ASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL- 120

Query: 121 HPFDCSVCLSEFQPDDKLRLLTQCSHAFHMECIDTWLLTHSTCPLCRASLISDF------ 180
            PFDCSVCL EFQP+DKLRLLT+CSHAFHM+CIDTWLLTHSTCPLCRASL+SDF      
Sbjct: 121 DPFDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGG 180

Query: 181 ------GVLDSAGNSSREIGEIPGGSFLGFPGDGWDSAESKRED------GAVVAIKLGK 240
                 GVL+SA NSSREIGEI  GSFLGF GD  +  E K E+        VV IKLGK
Sbjct: 181 FSSPIVGVLESASNSSREIGEIHTGSFLGFLGDTSNFTELKTEERPATAAETVVPIKLGK 240

Query: 241 FQSLERSGEGSSNGNGNVDDSRRCFSMGSFGYVMEENWSLQVP----------------- 300
           F++LE +GEGSSN NGNV  SRRCFSMGSFGYVM+EN SLQVP                 
Sbjct: 241 FRNLESNGEGSSN-NGNV-GSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKPARKKKDLP 300

Query: 301 ------------------------------------------------------VTAREL 341
                                                                 V   +L
Sbjct: 301 LTLGNRAAISECDCESRREFNFNELDQRVESFGHGKSKESCEEKAASGGGDSDGVAVTDL 360

[Close]

BLAST of Sed0018113 vs. NCBI nr
Match: XP_022929721.1 (RING-H2 finger protein ATL13-like [Cucurbita moschata])

HSP 1 Score: 425.2 bits (1092), Expect = 5.1e-115
Identity = 258/432 (59.72%), Postives = 287/432 (66.44%), Query Frame = 0


Query: 1   MASFSNPIS------PPPELRSAGGFALDYEVSPTILLSIIILAIIFFFAGLLHLLLRLF 60
           MA+ S PIS      PPPE  S GGF +D EVSPTILL+IIILAI+FFF+ LLHLLLRLF
Sbjct: 1   MAALSEPISALPPPPPPPETTSDGGFHIDKEVSPTILLAIIILAIVFFFSSLLHLLLRLF 60

Query: 61  LRPQLRTEHEDSAVDGGAASAFQGQLRQLFHLHDAGVDQTFIDALPVFPYKAILGPKLPH 120
           LRPQ RT+ ED AV  G  SAFQGQLRQLF LHDAGVDQ+FID LPVF YKAI+G K+  
Sbjct: 61  LRPQNRTDPEDIAVGDGDTSAFQGQLRQLFDLHDAGVDQSFIDTLPVFVYKAIIGLKV-D 120

Query: 121 PFDCSVCLSEFQPDDKLRLLTQCSHAFHMECIDTWLLTHSTCPLCRASLISDFG------ 180
           PFDCSVCL EFQP+DKLRLLT+CSHAFHM+CIDTWLLTHSTCPLCRASLISDF       
Sbjct: 121 PFDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLISDFAAINGGF 180

Query: 181 ------VLDSAGNSSREIGEIPGGSFLGFPGDGWDSAESKRED------GAVVAIKLGKF 240
                 VL+SA NSSREIGE+  GSFLGF G+  + AE K E+        VV IKLGKF
Sbjct: 181 TSPLVEVLESASNSSREIGEVHTGSFLGFLGNS-NFAELKPEEPPAAAAETVVPIKLGKF 240

Query: 241 QSLERSGEGSSNGNGNVDDSRRCFSMGSFGYVMEENWSLQVPVTAR-------------- 300
           +SLER GEGSSN NGNV DSRRCFSMGSFGYVM+EN SLQVP+  R              
Sbjct: 241 KSLERYGEGSSN-NGNV-DSRRCFSMGSFGYVMDENSSLQVPIRKRAARKQAIKKKNLPL 300

Query: 301 ------------------------------------------------------ELARRA 341
                                                                 +LARRA
Sbjct: 301 TPGTRAAMSECDGESRREFNFMETNPRVESFRHGSSKDSFEAKVVGAGTGLPVTDLARRA 360

[Close]

BLAST of Sed0018113 vs. ExPASy Swiss-Prot
Match: Q940Q4 (RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2)

HSP 1 Score: 238.4 bits (607), Expect = 1.2e-61
Identity = 148/305 (48.52%), Postives = 195/305 (63.93%), Query Frame = 0


Query: 5   SNPISPPPELRSAGGFALDYEVSPTILLSIIILAIIFFFAGLLHLLLRLFLRPQLRTEHE 64
           S P  PP  LRS+  F L+ ++SP+ILL IIIL+IIFF +GLLHLL+R  L P  R + E
Sbjct: 26  SLPQEPPLSLRSSANFDLNSKISPSILLIIIILSIIFFISGLLHLLVRFLLTPSSR-DRE 85

Query: 65  DSAVDGGAASAFQGQLRQLFHLHDAGVDQTFIDALPVFPYKAILGPKLPHPFDCSVCLSE 124
           D   +    +A QGQL+QLFHLHD+GVDQ+FID LPVF YK+I+G K  +PFDC+VCL E
Sbjct: 86  DYFDN---VTALQGQLQQLFHLHDSGVDQSFIDTLPVFHYKSIIGLK-NYPFDCAVCLCE 145

Query: 125 FQPDDKLRLLTQCSHAFHMECIDTWLLTHSTCPLCRASLISDFG-----------VLDSA 184
           F+ +DKLRLL +CSHAFHM+CIDTWLL+HSTCPLCR+SL+SD             VL+SA
Sbjct: 146 FETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRSSLLSDLSSHQDPRSSFLLVLESA 205

Query: 185 G-NSSREIG----------------------EIPGGSFLGFP------GDGWDSAESKRE 244
             +SSREIG                       + G + LG        GD +   E    
Sbjct: 206 SDHSSREIGGDRDSAACVAANDDIDVSSAHLGLVGNNDLGSTRIDSGHGDQYLDGELGGS 265

Query: 245 DGAVV--AIKLGKFQSLERSGEGSSN----GNGNVDDSRRCFSMGSFGYVMEENWSLQVP 264
            G VV  ++KLGKF++++  GEG+S+    GN +  D RRCFSMGS+ Y+M+E  +L+V 
Sbjct: 266 VGKVVPFSVKLGKFRNID-IGEGTSSNNNIGNSSSLDERRCFSMGSYEYIMDEETTLKVH 324

[Close]

BLAST of Sed0018113 vs. ExPASy Swiss-Prot
Match: Q9ZV53 (Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana OX=3702 GN=ATL49 PE=3 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 3.6e-55
Identity = 131/296 (44.26%), Postives = 182/296 (61.49%), Query Frame = 0


Query: 9   SPPPEL----RSAGGFALDYEVSPTILLSIIILAIIFFFAGLLHLLLRLFLRPQLRTEHE 68
           SPPP L     +     L+ +++P ILL IIIL+IIFF +GLLH+L++  L P  R   E
Sbjct: 18  SPPPPLIPLKSNTSLSNLNSKITPNILLIIIILSIIFFISGLLHILVKFLLTPS-RESRE 77

Query: 69  DSAVDGGAASAFQGQLRQLFHLHDAGVDQTFIDALPVFPYKAILGPKLPHPFDCSVCLSE 128
           D   +    +A QGQL+QLF+LHD+GVDQ+ ID LPVF YK+I+G K+  PFDC VCL E
Sbjct: 78  DYFDN---VTALQGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKI-SPFDCPVCLCE 137

Query: 129 FQPDDKLRLLTQCSHAFHMECIDTWLLTHSTCPLCRASLISDFG-----------VLDSA 188
           F+ +DKLRLL +CSHAFH+ECIDTWLL+HSTCPLCR++L+S F            VL+S 
Sbjct: 138 FETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLSGFSSHHNLSSSYLLVLESE 197

Query: 189 GNSSREIGEIPGGSFLGFPGDGWDSAESKR------------------EDGAVVAIKLGK 248
            +S   +  +   S LG+  D  + +ES R                  E    + +KLGK
Sbjct: 198 QSSRDMVPVLESNSQLGY--DVNNDSESTRIRSGRKSCDPDGDMDGLDEKVVPLEVKLGK 257

Query: 249 FQSLERSGEGSS------NGNGNVDDSRRCFSMGSFGYVMEENWSLQVPVTARELA 266
           F++++  GEGS       +GN    D RRC SMGS+ Y+M++  +L+V V+ ++L+
Sbjct: 258 FRNIDHVGEGSDQKKNSISGNSKNVDGRRCLSMGSYEYIMDQEATLKVHVSTKKLS 306

[Close]

BLAST of Sed0018113 vs. ExPASy Swiss-Prot
Match: Q9FL07 (RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 4.5e-45
Identity = 116/279 (41.58%), Postives = 157/279 (56.27%), Query Frame = 0


Query: 6   NPISPPPELRSAGGFALDYEVSPTILLSIIILAIIFFFAGLLHLLLRLFLRPQLRT--EH 65
           +P SPPP   S+G       +SP +L  I+ILA++FF +GLLHLL+R  ++    T    
Sbjct: 28  SPPSPPPP--SSGN-----RISPAVLFVIVILAVLFFISGLLHLLVRFLIKHPSATASSR 87

Query: 66  EDSAVDGGAASAFQGQLRQLFHLHDAGVDQTFIDALPVFPYKAILGP--------KLPHP 125
            +   +   + A Q QL+QLFHL+D+G+DQ FIDALPVF YK I+G             P
Sbjct: 88  SNRFPEISTSDALQRQLQQLFHLNDSGLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEP 147

Query: 126 FDCSVCLSEFQPDDKLRLLTQCSHAFHMECIDTWLLTHSTCPLCRASLISDFGVLDSAGN 185
           FDC+VCL EF   DKLRLL  CSHAFH+ CIDTWL ++STCPLCR +L S    +++   
Sbjct: 148 FDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTLFSPGFSMENPMF 207

Query: 186 SSREIGEIPGGSFLGFPGDGWDSAESKREDGAVVAIKLGKFQSLERSGE--------GSS 245
              +I E   G          +  E   E G V+ ++LGKF+ L+  G         G  
Sbjct: 208 DFDDIREDEEGVTENGSQKTMEIQEIVVEKG-VLPVRLGKFKRLDNVGNGQGQDVVAGGE 267

Query: 246 NGNGNVDDSRRCFSMGSFGYVMEENWSLQVPVTARELAR 267
             + N+ D+RRCFSMGS+ Y++  N  L+VP     L R
Sbjct: 268 TSSSNL-DARRCFSMGSYQYIL-GNSELKVPFANDRLPR 296

[Close]

BLAST of Sed0018113 vs. ExPASy Swiss-Prot
Match: Q8GW38 (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 5.8e-45
Identity = 115/254 (45.28%), Postives = 153/254 (60.24%), Query Frame = 0


Query: 16  SAGGFALDYEVSPTILLSIIILAIIFFFAGLLHLLLRLFL---RPQLRTEHEDS--AVDG 75
           S+GG   +  +SP IL  I++L++IFF   +LHLL+R +L   R  L +   +S    + 
Sbjct: 42  SSGG---NNRISPIILFIIVLLSVIFFICSILHLLVRYYLKKKRSNLSSSPNESNQNPEF 101

Query: 76  GAASAFQGQLRQLFHLHDAGVDQTFIDALPVFPYKAILGPKLPHPFDCSVCLSEFQPDDK 135
             +  +Q QL+QLFHLHD+G+DQ  IDALPVF YK I G K   PFDC+VCL EF  DDK
Sbjct: 102 SDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTK--EPFDCAVCLCEFSEDDK 161

Query: 136 LRLLTQCSHAFHMECIDTWLLTHSTCPLCRASLISDFGVLDSAGNSSREIGEIPGGSFLG 195
           LRLL  CSHAFH++CIDTWLL++STCPLCR       G L S G+   E  +   G F G
Sbjct: 162 LRLLPNCSHAFHIDCIDTWLLSNSTCPLCR-------GTLFSLGHQF-EYPDFNFGFFAG 221

Query: 196 FPGDGWDSAE-----SKREDG-AVVAIKLGKFQS--LERSGEGSSNGNGNVD----DSRR 253
             G G          ++ E G  V +++LGKF+S  +  +GE    G G       D+RR
Sbjct: 222 DDGGGGVRVSPVQKPAENEIGKRVFSVRLGKFRSSNIVNNGEVVVGGGGETSSSSLDNRR 281

[Close]

BLAST of Sed0018113 vs. ExPASy Swiss-Prot
Match: Q9FHG8 (Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana OX=3702 GN=ATL50 PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 4.9e-36
Identity = 84/161 (52.17%), Postives = 114/161 (70.81%), Query Frame = 0


Query: 20  FALDYEVSPTILLSIIILAIIFFFAGLLHLLLRLFLRPQLRTEHEDSAVDG--GAASAFQ 79
           F L   +SP +LL I +L+IIFF A L+HLL++   RPQ R    D A DG   +++A Q
Sbjct: 26  FDLICMISPIVLLYITLLSIIFFVAALIHLLVKFLHRPQTRL---DDAYDGITESSTALQ 85

Query: 80  GQLRQLFHLHDAGVDQTFIDALPVFPYKAILGPKLPHPF-DCSVCLSEFQPDDKLRLLTQ 139
           G+ +  F+LHDA +DQ+FIDALP+  YK ++G  L H   DC+VCL EF  +D+LRLL +
Sbjct: 86  GRYQTRFNLHDAEIDQSFIDALPLLHYKTMIG--LRHDLSDCAVCLREFTAEDELRLLPK 145

Query: 140 CSHAFHMECIDTWLLTHSTCPLCRASLISDFGVLDSAGNSS 178
           CSHAFH+ECIDTWLLT+STCPLCR +L+   G+  +A +S+
Sbjct: 146 CSHAFHVECIDTWLLTNSTCPLCRDNLLL-LGLTGTASSST 180

[Close]

BLAST of Sed0018113 vs. ExPASy TrEMBL
Match: A0A5D3CK86 (RING-H2 finger protein ATL13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00150 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 7.7e-117
Identity = 259/432 (59.95%), Postives = 286/432 (66.20%), Query Frame = 0


Query: 1   MASFSNPIS------PPPELRSAGGFALDYEVSPTILLSIIILAIIFFFAGLLHLLLRLF 60
           MA+ S PIS      P PE +S GGF LD EVSPTILL+IIILAIIFFF+GLLHLLLR F
Sbjct: 1   MATPSQPISNLPLPPPSPETQSDGGFNLDSEVSPTILLAIIILAIIFFFSGLLHLLLRFF 60

Query: 61  LRPQLRTEHEDSAVDGGAASAFQGQLRQLFHLHDAGVDQTFIDALPVFPYKAILGPKLPH 120
            +PQ+RT+ EDS    G ASAFQGQLRQLFHLHDAGVDQ+FID LPVF YKAI+G KL  
Sbjct: 61  HKPQIRTDLEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL-D 120

Query: 121 PFDCSVCLSEFQPDDKLRLLTQCSHAFHMECIDTWLLTHSTCPLCRASLISDF------- 180
           PFDCSVCL EFQP+DKLRLLT+CSHAFHM+CIDTWLLTHSTCPLCRASL+SDF       
Sbjct: 121 PFDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGF 180

Query: 181 -----GVLDSAGNSSREIGEIPGGSFLGFPGDGWDSAESKRED----GA--VVAIKLGKF 240
                GVL+SA NSSREIGE+  GSFLGF GD  D  E K E+    GA  VV IKLGKF
Sbjct: 181 SSPIVGVLESASNSSREIGEVHTGSFLGFLGDVSDFTELKTEEPPATGAETVVPIKLGKF 240

Query: 241 QSLERSGEGSSNGNGNVDDSRRCFSMGSFGYVMEENWSLQVPV----------------- 300
           ++LE +GEGSSN NGNV  SRRCFSMGSFGYVM+EN SLQVP+                 
Sbjct: 241 KNLESNGEGSSN-NGNV-GSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKPVRKKKDLPL 300

Query: 301 ---------------------------------------------------TARELARRA 341
                                                                 +L RRA
Sbjct: 301 MLGSRAAISECDCESRRDFNFEELSGRVESFRHGNSKDSCEEKVAGAGDRLPVMDLTRRA 360

[Close]

BLAST of Sed0018113 vs. ExPASy TrEMBL
Match: A0A1S3BUP8 (RING-H2 finger protein ATL13 OS=Cucumis melo OX=3656 GN=LOC103493377 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 1.0e-116
Identity = 259/432 (59.95%), Postives = 286/432 (66.20%), Query Frame = 0


Query: 1   MASFSNPIS------PPPELRSAGGFALDYEVSPTILLSIIILAIIFFFAGLLHLLLRLF 60
           MA+ S PIS      P PE +S GGF LD EVSPTILL+IIILAIIFFF+GLLHLLLR F
Sbjct: 1   MATPSQPISNLSLPPPSPETQSDGGFNLDSEVSPTILLAIIILAIIFFFSGLLHLLLRFF 60

Query: 61  LRPQLRTEHEDSAVDGGAASAFQGQLRQLFHLHDAGVDQTFIDALPVFPYKAILGPKLPH 120
            +PQ+RT+ EDS    G ASAFQGQLRQLFHLHDAGVDQ+FID LPVF YKAI+G KL  
Sbjct: 61  HKPQIRTDLEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL-D 120

Query: 121 PFDCSVCLSEFQPDDKLRLLTQCSHAFHMECIDTWLLTHSTCPLCRASLISDF------- 180
           PFDCSVCL EFQP+DKLRLLT+CSHAFHM+CIDTWLLTHSTCPLCRASL+SDF       
Sbjct: 121 PFDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAISGGF 180

Query: 181 -----GVLDSAGNSSREIGEIPGGSFLGFPGDGWDSAESKRED----GA--VVAIKLGKF 240
                GVL+SA NSSREIGE+  GSFLGF GD  D  E K E+    GA  VV IKLGKF
Sbjct: 181 SSPIVGVLESASNSSREIGEVHTGSFLGFLGDVSDFTELKTEEPPATGAETVVPIKLGKF 240

Query: 241 QSLERSGEGSSNGNGNVDDSRRCFSMGSFGYVMEENWSLQVPV----------------- 300
           ++LE +GEGSSN NGNV  SRRCFSMGSFGYVM+EN SLQVP+                 
Sbjct: 241 KNLECNGEGSSN-NGNV-GSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKPVRKKKDLPL 300

Query: 301 ---------------------------------------------------TARELARRA 341
                                                                 +L RRA
Sbjct: 301 MLGSRAAISECDCESRRDFNFEELSGRVESFRHGNSKDSCEEKVAGTGDRLPVMDLTRRA 360

[Close]

BLAST of Sed0018113 vs. ExPASy TrEMBL
Match: A0A0A0LH59 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G047810 PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 6.6e-116
Identity = 257/432 (59.49%), Postives = 285/432 (65.97%), Query Frame = 0


Query: 1   MASFSNPIS------PPPELRSAGGFALDYEVSPTILLSIIILAIIFFFAGLLHLLLRLF 60
           MA+ S PIS      P P+ +S GGF LD EVSPTILL+IIILAIIFFF+GLLHLLLR F
Sbjct: 1   MATLSQPISNFPLPPPSPDTQSDGGFNLDNEVSPTILLAIIILAIIFFFSGLLHLLLRFF 60

Query: 61  LRPQLRTEHEDSAVDGGAASAFQGQLRQLFHLHDAGVDQTFIDALPVFPYKAILGPKLPH 120
            +PQ+RT+ EDS    G ASAFQGQLRQLFHLHDAGVDQ+FID LPVF YKAI+G KL  
Sbjct: 61  HKPQIRTDPEDSTAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL-D 120

Query: 121 PFDCSVCLSEFQPDDKLRLLTQCSHAFHMECIDTWLLTHSTCPLCRASLISDF------- 180
           PFDCSVCL EFQP+DKLRLLT+CSHAFHM+CIDTWLLTHSTCPLCRASL+SDF       
Sbjct: 121 PFDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGGF 180

Query: 181 -----GVLDSAGNSSREIGEIPGGSFLGFPGDGWDSAESKRED----GA--VVAIKLGKF 240
                GVL+SA NSSREIGE+  GSFLGF GD  D  E K E+    GA  VV IKLGKF
Sbjct: 181 SSPIVGVLESASNSSREIGEVHTGSFLGFLGDVSDFTELKTEEPPATGAETVVPIKLGKF 240

Query: 241 QSLERSGEGSSNGNGNVDDSRRCFSMGSFGYVMEENWSLQVP------------------ 300
           ++LE +GEGSSN N NV  SRRCFSMGSFGYVM+EN SLQVP                  
Sbjct: 241 KNLESNGEGSSN-NSNV-GSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKQVRKKKDLPL 300

Query: 301 --------------------------------------------------VTARELARRA 341
                                                             V   +L+RRA
Sbjct: 301 MLGSRAAISECDCESRREFNFEELSGRVESFRHGNSKDSCEEKVAGAGDRVAVMDLSRRA 360

[Close]

BLAST of Sed0018113 vs. ExPASy TrEMBL
Match: A0A6J1ENY6 (RING-H2 finger protein ATL13-like OS=Cucurbita moschata OX=3662 GN=LOC111436220 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 2.5e-115
Identity = 258/432 (59.72%), Postives = 287/432 (66.44%), Query Frame = 0


Query: 1   MASFSNPIS------PPPELRSAGGFALDYEVSPTILLSIIILAIIFFFAGLLHLLLRLF 60
           MA+ S PIS      PPPE  S GGF +D EVSPTILL+IIILAI+FFF+ LLHLLLRLF
Sbjct: 1   MAALSEPISALPPPPPPPETTSDGGFHIDKEVSPTILLAIIILAIVFFFSSLLHLLLRLF 60

Query: 61  LRPQLRTEHEDSAVDGGAASAFQGQLRQLFHLHDAGVDQTFIDALPVFPYKAILGPKLPH 120
           LRPQ RT+ ED AV  G  SAFQGQLRQLF LHDAGVDQ+FID LPVF YKAI+G K+  
Sbjct: 61  LRPQNRTDPEDIAVGDGDTSAFQGQLRQLFDLHDAGVDQSFIDTLPVFVYKAIIGLKV-D 120

Query: 121 PFDCSVCLSEFQPDDKLRLLTQCSHAFHMECIDTWLLTHSTCPLCRASLISDFG------ 180
           PFDCSVCL EFQP+DKLRLLT+CSHAFHM+CIDTWLLTHSTCPLCRASLISDF       
Sbjct: 121 PFDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLISDFAAINGGF 180

Query: 181 ------VLDSAGNSSREIGEIPGGSFLGFPGDGWDSAESKRED------GAVVAIKLGKF 240
                 VL+SA NSSREIGE+  GSFLGF G+  + AE K E+        VV IKLGKF
Sbjct: 181 TSPLVEVLESASNSSREIGEVHTGSFLGFLGNS-NFAELKPEEPPAAAAETVVPIKLGKF 240

Query: 241 QSLERSGEGSSNGNGNVDDSRRCFSMGSFGYVMEENWSLQVPVTAR-------------- 300
           +SLER GEGSSN NGNV DSRRCFSMGSFGYVM+EN SLQVP+  R              
Sbjct: 241 KSLERYGEGSSN-NGNV-DSRRCFSMGSFGYVMDENSSLQVPIRKRAARKQAIKKKNLPL 300

Query: 301 ------------------------------------------------------ELARRA 341
                                                                 +LARRA
Sbjct: 301 TPGTRAAMSECDGESRREFNFMETNPRVESFRHGSSKDSFEAKVVGAGTGLPVTDLARRA 360

[Close]

BLAST of Sed0018113 vs. ExPASy TrEMBL
Match: A0A6J1K4Y8 (RING-H2 finger protein ATL13-like OS=Cucurbita maxima OX=3661 GN=LOC111492337 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 4.7e-114
Identity = 256/432 (59.26%), Postives = 286/432 (66.20%), Query Frame = 0


Query: 1   MASFSNPIS------PPPELRSAGGFALDYEVSPTILLSIIILAIIFFFAGLLHLLLRLF 60
           MA+ S PIS      PPPE  S GGF +D EVSPTILL+IIILAI+FFF+ LLHLLLRLF
Sbjct: 1   MAALSEPISALPPPPPPPETTSDGGFRIDKEVSPTILLAIIILAIVFFFSSLLHLLLRLF 60

Query: 61  LRPQLRTEHEDSAVDGGAASAFQGQLRQLFHLHDAGVDQTFIDALPVFPYKAILGPKLPH 120
           LRPQ RT+ ED AV  G  SAFQGQLRQLF LHDAGVDQ+FID LPVF YKAI+G KL  
Sbjct: 61  LRPQNRTDPEDIAVGDGDTSAFQGQLRQLFDLHDAGVDQSFIDTLPVFVYKAIIGLKL-D 120

Query: 121 PFDCSVCLSEFQPDDKLRLLTQCSHAFHMECIDTWLLTHSTCPLCRASLISDFG------ 180
           PFDCSVCL EFQP+DKLRLLT+CSHAFHM+CIDTWLLTHSTCPLCRASLISDF       
Sbjct: 121 PFDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLISDFAAINGGF 180

Query: 181 ------VLDSAGNSSREIGEIPGGSFLGFPGDGWDSAESKRED------GAVVAIKLGKF 240
                 VL+SA NSSREIG++  GSFLGF G+  + AE K E+        VV IKLGKF
Sbjct: 181 TSPLVEVLESASNSSREIGDVHTGSFLGFLGNS-NFAELKPEEPPAEAAEKVVPIKLGKF 240

Query: 241 QSLERSGEGSSNGNGNVDDSRRCFSMGSFGYVMEENWSLQVPVTAR-------------- 300
           +SLER GEGSSN NGNV DSRRCFSMGSFGYVM+EN SLQVP+  R              
Sbjct: 241 KSLERYGEGSSN-NGNV-DSRRCFSMGSFGYVMDENSSLQVPIRKRAARKQAIKKKNLPL 300

Query: 301 ------------------------------------------------------ELARRA 341
                                                                 +LARRA
Sbjct: 301 TPGTRAAMSECDGESRREFNFMETNRRVESFRHGSSKESFEAKVVGAGVGLPVTDLARRA 360

[Close]

BLAST of Sed0018113 vs. TAIR 10
Match: AT4G30400.1 (RING/U-box superfamily protein )

HSP 1 Score: 238.4 bits (607), Expect = 8.3e-63
Identity = 148/305 (48.52%), Postives = 195/305 (63.93%), Query Frame = 0


Query: 5   SNPISPPPELRSAGGFALDYEVSPTILLSIIILAIIFFFAGLLHLLLRLFLRPQLRTEHE 64
           S P  PP  LRS+  F L+ ++SP+ILL IIIL+IIFF +GLLHLL+R  L P  R + E
Sbjct: 26  SLPQEPPLSLRSSANFDLNSKISPSILLIIIILSIIFFISGLLHLLVRFLLTPSSR-DRE 85

Query: 65  DSAVDGGAASAFQGQLRQLFHLHDAGVDQTFIDALPVFPYKAILGPKLPHPFDCSVCLSE 124
           D   +    +A QGQL+QLFHLHD+GVDQ+FID LPVF YK+I+G K  +PFDC+VCL E
Sbjct: 86  DYFDN---VTALQGQLQQLFHLHDSGVDQSFIDTLPVFHYKSIIGLK-NYPFDCAVCLCE 145

Query: 125 FQPDDKLRLLTQCSHAFHMECIDTWLLTHSTCPLCRASLISDFG-----------VLDSA 184
           F+ +DKLRLL +CSHAFHM+CIDTWLL+HSTCPLCR+SL+SD             VL+SA
Sbjct: 146 FETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRSSLLSDLSSHQDPRSSFLLVLESA 205

Query: 185 G-NSSREIG----------------------EIPGGSFLGFP------GDGWDSAESKRE 244
             +SSREIG                       + G + LG        GD +   E    
Sbjct: 206 SDHSSREIGGDRDSAACVAANDDIDVSSAHLGLVGNNDLGSTRIDSGHGDQYLDGELGGS 265

Query: 245 DGAVV--AIKLGKFQSLERSGEGSSN----GNGNVDDSRRCFSMGSFGYVMEENWSLQVP 264
            G VV  ++KLGKF++++  GEG+S+    GN +  D RRCFSMGS+ Y+M+E  +L+V 
Sbjct: 266 VGKVVPFSVKLGKFRNID-IGEGTSSNNNIGNSSSLDERRCFSMGSYEYIMDEETTLKVH 324

[Close]

BLAST of Sed0018113 vs. TAIR 10
Match: AT2G18650.1 (RING/U-box superfamily protein )

HSP 1 Score: 216.9 bits (551), Expect = 2.6e-56
Identity = 131/296 (44.26%), Postives = 182/296 (61.49%), Query Frame = 0


Query: 9   SPPPEL----RSAGGFALDYEVSPTILLSIIILAIIFFFAGLLHLLLRLFLRPQLRTEHE 68
           SPPP L     +     L+ +++P ILL IIIL+IIFF +GLLH+L++  L P  R   E
Sbjct: 18  SPPPPLIPLKSNTSLSNLNSKITPNILLIIIILSIIFFISGLLHILVKFLLTPS-RESRE 77

Query: 69  DSAVDGGAASAFQGQLRQLFHLHDAGVDQTFIDALPVFPYKAILGPKLPHPFDCSVCLSE 128
           D   +    +A QGQL+QLF+LHD+GVDQ+ ID LPVF YK+I+G K+  PFDC VCL E
Sbjct: 78  DYFDN---VTALQGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKI-SPFDCPVCLCE 137

Query: 129 FQPDDKLRLLTQCSHAFHMECIDTWLLTHSTCPLCRASLISDFG-----------VLDSA 188
           F+ +DKLRLL +CSHAFH+ECIDTWLL+HSTCPLCR++L+S F            VL+S 
Sbjct: 138 FETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLSGFSSHHNLSSSYLLVLESE 197

Query: 189 GNSSREIGEIPGGSFLGFPGDGWDSAESKR------------------EDGAVVAIKLGK 248
            +S   +  +   S LG+  D  + +ES R                  E    + +KLGK
Sbjct: 198 QSSRDMVPVLESNSQLGY--DVNNDSESTRIRSGRKSCDPDGDMDGLDEKVVPLEVKLGK 257

Query: 249 FQSLERSGEGSS------NGNGNVDDSRRCFSMGSFGYVMEENWSLQVPVTARELA 266
           F++++  GEGS       +GN    D RRC SMGS+ Y+M++  +L+V V+ ++L+
Sbjct: 258 FRNIDHVGEGSDQKKNSISGNSKNVDGRRCLSMGSYEYIMDQEATLKVHVSTKKLS 306

[Close]

BLAST of Sed0018113 vs. TAIR 10
Match: AT5G40250.1 (RING/U-box superfamily protein )

HSP 1 Score: 183.3 bits (464), Expect = 3.2e-46
Identity = 116/279 (41.58%), Postives = 157/279 (56.27%), Query Frame = 0


Query: 6   NPISPPPELRSAGGFALDYEVSPTILLSIIILAIIFFFAGLLHLLLRLFLRPQLRT--EH 65
           +P SPPP   S+G       +SP +L  I+ILA++FF +GLLHLL+R  ++    T    
Sbjct: 28  SPPSPPPP--SSGN-----RISPAVLFVIVILAVLFFISGLLHLLVRFLIKHPSATASSR 87

Query: 66  EDSAVDGGAASAFQGQLRQLFHLHDAGVDQTFIDALPVFPYKAILGP--------KLPHP 125
            +   +   + A Q QL+QLFHL+D+G+DQ FIDALPVF YK I+G             P
Sbjct: 88  SNRFPEISTSDALQRQLQQLFHLNDSGLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEP 147

Query: 126 FDCSVCLSEFQPDDKLRLLTQCSHAFHMECIDTWLLTHSTCPLCRASLISDFGVLDSAGN 185
           FDC+VCL EF   DKLRLL  CSHAFH+ CIDTWL ++STCPLCR +L S    +++   
Sbjct: 148 FDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTLFSPGFSMENPMF 207

Query: 186 SSREIGEIPGGSFLGFPGDGWDSAESKREDGAVVAIKLGKFQSLERSGE--------GSS 245
              +I E   G          +  E   E G V+ ++LGKF+ L+  G         G  
Sbjct: 208 DFDDIREDEEGVTENGSQKTMEIQEIVVEKG-VLPVRLGKFKRLDNVGNGQGQDVVAGGE 267

Query: 246 NGNGNVDDSRRCFSMGSFGYVMEENWSLQVPVTARELAR 267
             + N+ D+RRCFSMGS+ Y++  N  L+VP     L R
Sbjct: 268 TSSSNL-DARRCFSMGSYQYIL-GNSELKVPFANDRLPR 296

[Close]

BLAST of Sed0018113 vs. TAIR 10
Match: AT1G23980.1 (RING/U-box superfamily protein )

HSP 1 Score: 183.0 bits (463), Expect = 4.1e-46
Identity = 115/254 (45.28%), Postives = 153/254 (60.24%), Query Frame = 0


Query: 16  SAGGFALDYEVSPTILLSIIILAIIFFFAGLLHLLLRLFL---RPQLRTEHEDS--AVDG 75
           S+GG   +  +SP IL  I++L++IFF   +LHLL+R +L   R  L +   +S    + 
Sbjct: 42  SSGG---NNRISPIILFIIVLLSVIFFICSILHLLVRYYLKKKRSNLSSSPNESNQNPEF 101

Query: 76  GAASAFQGQLRQLFHLHDAGVDQTFIDALPVFPYKAILGPKLPHPFDCSVCLSEFQPDDK 135
             +  +Q QL+QLFHLHD+G+DQ  IDALPVF YK I G K   PFDC+VCL EF  DDK
Sbjct: 102 SDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTK--EPFDCAVCLCEFSEDDK 161

Query: 136 LRLLTQCSHAFHMECIDTWLLTHSTCPLCRASLISDFGVLDSAGNSSREIGEIPGGSFLG 195
           LRLL  CSHAFH++CIDTWLL++STCPLCR       G L S G+   E  +   G F G
Sbjct: 162 LRLLPNCSHAFHIDCIDTWLLSNSTCPLCR-------GTLFSLGHQF-EYPDFNFGFFAG 221

Query: 196 FPGDGWDSAE-----SKREDG-AVVAIKLGKFQS--LERSGEGSSNGNGNVD----DSRR 253
             G G          ++ E G  V +++LGKF+S  +  +GE    G G       D+RR
Sbjct: 222 DDGGGGVRVSPVQKPAENEIGKRVFSVRLGKFRSSNIVNNGEVVVGGGGETSSSSLDNRR 281

[Close]

BLAST of Sed0018113 vs. TAIR 10
Match: AT5G57750.1 (RING/U-box superfamily protein )

HSP 1 Score: 153.3 bits (386), Expect = 3.5e-37
Identity = 84/161 (52.17%), Postives = 114/161 (70.81%), Query Frame = 0


Query: 20  FALDYEVSPTILLSIIILAIIFFFAGLLHLLLRLFLRPQLRTEHEDSAVDG--GAASAFQ 79
           F L   +SP +LL I +L+IIFF A L+HLL++   RPQ R    D A DG   +++A Q
Sbjct: 26  FDLICMISPIVLLYITLLSIIFFVAALIHLLVKFLHRPQTRL---DDAYDGITESSTALQ 85

Query: 80  GQLRQLFHLHDAGVDQTFIDALPVFPYKAILGPKLPHPF-DCSVCLSEFQPDDKLRLLTQ 139
           G+ +  F+LHDA +DQ+FIDALP+  YK ++G  L H   DC+VCL EF  +D+LRLL +
Sbjct: 86  GRYQTRFNLHDAEIDQSFIDALPLLHYKTMIG--LRHDLSDCAVCLREFTAEDELRLLPK 145

Query: 140 CSHAFHMECIDTWLLTHSTCPLCRASLISDFGVLDSAGNSS 178
           CSHAFH+ECIDTWLLT+STCPLCR +L+   G+  +A +S+
Sbjct: 146 CSHAFHVECIDTWLLTNSTCPLCRDNLLL-LGLTGTASSST 180

The following BLAST results are available for this feature:

BLAST of Sed0018113 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048645.1	1.6e-116	59.95	RING-H2 finger protein ATL13 [Cucumis melo var. makuwa] >TYK10846.1 RING-H2 fing...	[more]
XP_008452317.1	2.1e-116	59.95	PREDICTED: RING-H2 finger protein ATL13 [Cucumis melo]	[more]
XP_004149099.1	1.4e-115	59.49	RING-H2 finger protein ATL13 [Cucumis sativus] >KGN61088.1 hypothetical protein ...	[more]
XP_038890570.1	2.3e-115	59.40	RING-H2 finger protein ATL13-like [Benincasa hispida]	[more]
XP_022929721.1	5.1e-115	59.72	RING-H2 finger protein ATL13-like [Cucurbita moschata]	[more]

BLAST of Sed0018113 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q940Q4	1.2e-61	48.52	RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2	[more]
Q9ZV53	3.6e-55	44.26	Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana OX=3702 GN=ATL49 P...	[more]
Q9FL07	4.5e-45	41.58	RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1	[more]
Q8GW38	5.8e-45	45.28	RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1	[more]
Q9FHG8	4.9e-36	52.17	Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana OX=3702 GN=ATL50 P...	[more]

BLAST of Sed0018113 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CK86	7.7e-117	59.95	RING-H2 finger protein ATL13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3BUP8	1.0e-116	59.95	RING-H2 finger protein ATL13 OS=Cucumis melo OX=3656 GN=LOC103493377 PE=4 SV=1	[more]
A0A0A0LH59	6.6e-116	59.49	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G047810 P...	[more]
A0A6J1ENY6	2.5e-115	59.72	RING-H2 finger protein ATL13-like OS=Cucurbita moschata OX=3662 GN=LOC111436220 ...	[more]
A0A6J1K4Y8	4.7e-114	59.26	RING-H2 finger protein ATL13-like OS=Cucurbita maxima OX=3661 GN=LOC111492337 PE...	[more]

BLAST of Sed0018113 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30400.1	8.3e-63	48.52	RING/U-box superfamily protein	[more]
AT2G18650.1	2.6e-56	44.26	RING/U-box superfamily protein	[more]
AT5G40250.1	3.2e-46	41.58	RING/U-box superfamily protein	[more]
AT1G23980.1	4.1e-46	45.28	RING/U-box superfamily protein	[more]
AT5G57750.1	3.5e-37	52.17	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 118..159 e-value: 4.9E-6 score: 36.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 117..160 e-value: 9.0E-14 score: 51.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 118..160 score: 12.917115
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 80..165 e-value: 8.3E-20 score: 72.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 275..295
None	No IPR available	PANTHER	PTHR45768:SF10	RING-H2 FINGER PROTEIN ATL13-RELATED	coord: 23..270
None	No IPR available	PANTHER	PTHR45768	E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE	coord: 23..270
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 117..160 e-value: 7.02092E-19 score: 76.9569
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 111..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0018113.1	Sed0018113.1	mRNA