Sed0017852 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCCTTCGTCCCCTCGACTTGTCTGCACGGAGTTAAAATGGATCACCAAAAGAAATTGCAGAAAAATCTTTTCGATGTTTCTGGTTTTCTTTCCGTCTCTGTCCATTAACACGACGAAGCAAGAAACCTTCAAGCGATTATGGCGATGGCATCGTTCAATCTAGCGCTTGGTCCTCAGCAGAAGGTAAACTTGGCTACAATTTCTTTGTTTTTCGTTATGTTTTGAAACGATCTCTCGAATTTCTGTCCACAAATTTGAGATTCGGTGCCTGAAATGAATGTCTGTGTTTGTTTCACCTTTGCAGGCACGGTCTCTCCAAGTTTCTTGCAGAAGAAAAGAAAAGGAACGCAACAATTTTGATCCGTACAAAGTGATTGAAATCACTCCTCCGCCGAAGAACCTCGGCATTCGTTGCTTTCCGCCCGTAAGTGTTCCATTTTGATTCTCGATTTTTCTTGATTGGGTTTCTGATATGAACATATGTTATACTCACGTTGAGAATGCGAGCTTTGAGATTGTGCATTTAATTCACATTTAGGGAATCTGTATTCTGCAAAAAAAATTTAACCTGATAGACGTTGATTCTTTGCCTAAGTTGTACGGGTGCACAAAAGAACCGACAATTTTTGGCTCGTCCAACCCAACTCAACCTAAAATTGAACTATATGGATTTAAGATTAACTAATAAGAAAAGTTTTTAGCACAATTGTAAGAAGTATGTCCTAACGAGTAACGAGATAGATATCTTGGGTTCAAGGTTAGAATCATGCAATTTTTCTTTTTCTTTTTTCTTCTTTTTTTTTTACATATTTATGGATTATAGATAGGATTTTGAAGAGTAAAAATGAGATAAATACAACTCGATAACCCAACTCAACTCAACATGAAGAATATATGGATTGAGCGGAGTTGGGTTGTTCTAATATATAGAGTTGGATGAGTTGGCGGATTCACCAATCCAAAAATTTGAGTTGGTCCAAATAATGTCATTAATCTAAGCTAACTTGAACCATGTACCCCCTTGGCAGTAGTAAGCATAGAATATTTTTGTTGTGACTTTCATATATGAATGTTATGCTTTATTTGTTTAGAACAACAGTAGTTCGTTTCATTAGATTTTCAGAGGGTGGTGCATTGGTTGAATGGGCTTTGAGGGTATGCTCCTCTCAAAGTCGTGGGTTCGAGACTCACTTGTGACATTACTCTTTCGATATTTCCGGTGCCTAGTCTAGGGACGGGCATGGTTACCCTTATTAAAAAAAAAAAACATGACAAATTAATGGTCCTCCTGGACCGTTGAAAATCTCTGATGAAATGCTGCTTCCATGGTGTACACTGAAAGACATAATAGACGTAGACATAGACACACACACATATATATATATATACATATTTGACATTTATCAATTATGAAGCCTTCGTCTTTGAAATCTCAAATGTGTATGATTGTCATCATGGTGATTGCCAATCAGTATTTTTTGGTGAAATTAACTTCAAAATCCATGTTCATTTACTTGGGTTTCCAATATACCACTAATGGGGTGATGGGACTTTGGGGAATTAAGAGGTGATGGGTTTCATCCATGATAACCACCTATTTAGGAATTAATTTCCTATGAATTTACTTTACATTCAAATGTTATTTGGTGGGATAGTATGTCCCATAATATTAATCAAAGTGCATGCAAACTTGCTCAAACAGTTATGAATATCAAATAAAAAATGCCACTAATGGGGTGGGGATTCTTAGGGAAGAATAGAATCTGATCATATTGAATGCCTGCTTTTCTTTGTGCTTACCCAGCCAAACCACACATGATATTGAATGCCTTCTTTATGGTCTCTCTCTGAACCCAATGGCCAAGACACAAGATTCTTTGGTCTTGTGCAATCAAGGTTACCTATTGGGAATTTTGGCTGAAAATAAGTATCAGATCTTTTTAAGGATAAATATAGTTGGTGCTTAGTGTGGGAGTGGCGAGGGAGCCTCTTGTGATTGTGGATTAGGAGGCATAAAAGGGGAGGGGTCATACTTTGCGAAAAAGTGTGAGGACTTAAGGAGGAGAGTCTCTGGTGTTCCATAACTCACCGGTTAGCTTGTCGTTTATCGTACTTTATTTCGTATCGTAATTTCTTATTACTTGTTCCTGGTAATGAAGTGAATGGACTGGTTATTGCGTATTATTTTCCATCTATATTGTATTTTTTTATTATTGCAATAAGTATTTGGTATCGATACCTTTACAATGAGCTTGCCGAGCAGCGCAATAGAGATGCTTGCTAAAGCACTATACAGCGCAAAAACCATTTGCCCCACCTTGCTTTTTTGCACCATAGGCACCCACATGAAGCTACCATAGTGACACTGACTATGAACTCATTTTTTCTCTTTGTATATCTTTTTTTTAATATAGTTCACTTACCAAATAGTCTTGGTTTCTTATCTTTATGGGGGAAAGAAACATGAACAATTTTGTCTTAATTTCATTTCAATATTATTTCAGAACTTACAATGTGGGGAAAGTGTAACGATAGAAGGCCAAACATACACTATATCAGCTGTAACTCTTCGCTATCAGCTCAGGAAAGGGAAGTATGAACCAAGTGAAAAGAGACTTGATGTTTTGTCTACAGGAAGGTACATCTTGAATTTGTATCTAGAAAGTTTATTAGAAAATTCTTGATGCCTTTGTTGTATGATAACATGTAATTACAATTATTGTGCTCATTGGTTGAGCTACTTTGTGCATATTTTCCATTTGAAGAGGCTTTTCAAGAACTTATTTGTATCTAGTGCTGGCCAATCATGTTAAGGATGTAATTGTTCAATAATTATGGGGAAGAATTGAACCATCGATCTTTAAAGTGGTAATTAATAGTCTTGTCTACT TTTCCTTCGTCCCCTCGACTTGTCTGCACGGAGTTAAAATGGATCACCAAAAGAAATTGCAGAAAAATCTTTTCGATGTTTCTGGTTTTCTTTCCGTCTCTGTCCATTAACACGACGAAGCAAGAAACCTTCAAGCGATTATGGCGATGGCATCGTTCAATCTAGCGCTTGGTCCTCAGCAGAAGGCACGGTCTCTCCAAGTTTCTTGCAGAAGAAAAGAAAAGGAACGCAACAATTTTGATCCGTACAAAGTGATTGAAATCACTCCTCCGCCGAAGAACCTCGGCATTCGTTGCTTTCCGCCCAACTTACAATGTGGGGAAAGTGTAACGATAGAAGGCCAAACATACACTATATCAGCTGTAACTCTTCGCTATCAGCTCAGGAAAGGGAAGTATGAACCAAGTGAAAAGAGACTTGATGTTTTGTCTACAGGAAGGTACATCTTGAATTTGTATCTAGAAAGTTTATTAGAAAATTCTTGATGCCTTTGTTGTATGATAACATGTAATTACAATTATTGTGCTCATTGGTTGAGCTACTTTGTGCATATTTTCCATTTGAAGAGGCTTTTCAAGAACTTATTTGTATCTAGTGCTGGCCAATCATGTTAAGGATGTAATTGTTCAATAATTATGGGGAAGAATTGAACCATCGATCTTTAAAGTGGTAATTAATAGTCTTGTCTACT ATGGCGATGGCATCGTTCAATCTAGCGCTTGGTCCTCAGCAGAAGGCACGGTCTCTCCAAGTTTCTTGCAGAAGAAAAGAAAAGGAACGCAACAATTTTGATCCGTACAAAGTGATTGAAATCACTCCTCCGCCGAAGAACCTCGGCATTCGTTGCTTTCCGCCCAACTTACAATGTGGGGAAAGTGTAACGATAGAAGGCCAAACATACACTATATCAGCTGTAACTCTTCGCTATCAGCTCAGGAAAGGGAAGTATGAACCAAGTGAAAAGAGACTTGATGTTTTGTCTACAGGAAGGTACATCTTGAATTTGTATCTAGAAAGTTTATTAGAAAATTCTTGA MAMASFNLALGPQQKARSLQVSCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTGRYILNLYLESLLENS Homology
BLAST of Sed0017852 vs. NCBI nr
Match: KAG6578668.1 (hypothetical protein SDJN03_23116, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016208.1 hypothetical protein SDJN02_21313, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 220.7 bits (561), Expect = 6.5e-54 Identity = 107/114 (93.86%), Postives = 110/114 (96.49%), Query Frame = 0
BLAST of Sed0017852 vs. NCBI nr
Match: XP_022993339.1 (uncharacterized protein LOC111489380 [Cucurbita maxima] >XP_023551188.1 uncharacterized protein LOC111809077 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 218.8 bits (556), Expect = 2.5e-53 Identity = 106/114 (92.98%), Postives = 109/114 (95.61%), Query Frame = 0
BLAST of Sed0017852 vs. NCBI nr
Match: XP_022939382.1 (uncharacterized protein LOC111445315 [Cucurbita moschata]) HSP 1 Score: 218.0 bits (554), Expect = 4.2e-53 Identity = 105/114 (92.11%), Postives = 109/114 (95.61%), Query Frame = 0
BLAST of Sed0017852 vs. NCBI nr
Match: XP_004142788.1 (uncharacterized protein LOC101221627 [Cucumis sativus] >KGN51358.1 hypothetical protein Csa_009241 [Cucumis sativus]) HSP 1 Score: 209.1 bits (531), Expect = 1.9e-50 Identity = 103/115 (89.57%), Postives = 107/115 (93.04%), Query Frame = 0
BLAST of Sed0017852 vs. NCBI nr
Match: XP_008458808.1 (PREDICTED: uncharacterized protein LOC103498107 [Cucumis melo]) HSP 1 Score: 208.8 bits (530), Expect = 2.5e-50 Identity = 103/115 (89.57%), Postives = 106/115 (92.17%), Query Frame = 0
BLAST of Sed0017852 vs. ExPASy TrEMBL
Match: A0A6J1JZX4 (uncharacterized protein LOC111489380 OS=Cucurbita maxima OX=3661 GN=LOC111489380 PE=4 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 1.2e-53 Identity = 106/114 (92.98%), Postives = 109/114 (95.61%), Query Frame = 0
BLAST of Sed0017852 vs. ExPASy TrEMBL
Match: A0A6J1FGM6 (uncharacterized protein LOC111445315 OS=Cucurbita moschata OX=3662 GN=LOC111445315 PE=4 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 2.0e-53 Identity = 105/114 (92.11%), Postives = 109/114 (95.61%), Query Frame = 0
BLAST of Sed0017852 vs. ExPASy TrEMBL
Match: A0A0A0KP15 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G523040 PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 9.4e-51 Identity = 103/115 (89.57%), Postives = 107/115 (93.04%), Query Frame = 0
BLAST of Sed0017852 vs. ExPASy TrEMBL
Match: A0A1S3C8Q2 (uncharacterized protein LOC103498107 OS=Cucumis melo OX=3656 GN=LOC103498107 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 1.2e-50 Identity = 103/115 (89.57%), Postives = 106/115 (92.17%), Query Frame = 0
BLAST of Sed0017852 vs. ExPASy TrEMBL
Match: A0A6J1BVQ0 (uncharacterized protein LOC111006184 OS=Momordica charantia OX=3673 GN=LOC111006184 PE=4 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 3.6e-50 Identity = 102/112 (91.07%), Postives = 104/112 (92.86%), Query Frame = 0
BLAST of Sed0017852 vs. TAIR 10
Match: AT5G40500.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 153.7 bits (387), Expect = 9.0e-38 Identity = 81/123 (65.85%), Postives = 97/123 (78.86%), Query Frame = 0
BLAST of Sed0017852 vs. TAIR 10
Match: AT5G40500.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 22 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 153.7 bits (387), Expect = 9.0e-38 Identity = 80/115 (69.57%), Postives = 94/115 (81.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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