Sed0017840 (gene) Chayote v1

Overview
NameSed0017840
Typegene
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
LocationLG13: 8891186 .. 8893375 (+)
RNA-Seq ExpressionSed0017840
SyntenySed0017840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGGAATTAAGGTCACCTTCCTTAACTTCAATCTTTTTTCATTTTTCTTTATTGGTTGATATAATTAAATTTACCCAAATCCATCGGCTTTTAGATTGATTGTTGGTTTAATATAATCCAACATTGTATCAAAGTAGGAAGTCATGAATTCGAATCTCTGTCAAATCATTTCCTCCCCAATTAAAATTAAATTCCACTTGTAGGACATTTCACAAATGAGATGGAACCCCATATCATCTAATATGATATCAGAGCCCATGTGGATTATTGGTCCCCAAATTCTGATCCGACCCAAGCGAGTAGTTTGGACCTTCAACCAAAGAGGAAAGCTATCAGCCCAATGTATGAGCCAAACAATTGGGTTTTCTAGAGATATACTTCAATTTTACACAGGAATTCAAGTTTATCACCCATTTTCCATCTTTGCCAGCATGGATCACAAGCTTGGCATCTGATTCGATACAAGCTGATGACAACTCCATCTCAAAAGCAAGGCGGATCCCTCTGATAATGGCTAGCGATTCTGCAGCAAAAGCATCATACTTAGCTGTTAGGGAAAAGGCATCACAGAAGACGCATAAGCTGTTGTGGTCTCGAAGCACCACATCAATCCCCGTTCTACAATTGTCGTCGACTGAGAGAGAAAAAGTCCCCAATGTAGGAGGAGACAAAAAACGATCTGGAGGCATTTGGTTGTTTGAGCAATTATTGGAGCAGTGCCATAGATGGGGTTTCTATTCTGATAGTCAGTCATGTAAGCCAAAACCCAATCTCTTCTCAGCTGTGCTATTGGAATTTCCTCATTTCTTACCATTTTATTTCTCTCATTCCAAACCGCCCATAACCTCACACACACTAACTCAAGATCCTTGGGTGATAAAACAGTTGAAATCTTGAGCAAAGAGGCCTGGAAATCGGTAACACCAGCAACCATTTGAAGGGTTAGAGAGAACAAATAAATCAAAAAATTATTGGGGTGTCTGCAATTAAAGAAGGTATGTGTCAAATTTTCTACTTGAAGATCACAAATGCACAGTTTGTCTATCATAAAGATTCTTGAAAATTGGTAGGAAATTACGATACACTCTCCACACGAAGATTTTTATCTTAGAAGGAACATTCATATCCCACGCTTTTTTCCACTAGCTAGCTATCATATGTGAATAAGATGTACTTTCCTTCACTTTCGAATTAAGATAAATCACTCCATTTTTTGAATAATGCCAAATCCAACTATCAACTCTCAAAGACTTACATACATGAATTGAAAGAACCATCTCAGCATCAACCAATCAAAGCACAGGCCATTACTGTTTATCAATTCAGAAACCAGCATATTTCTATCTTCATTTCTTGGAGAGGTGATAACTTTAAAAGAGAGGAAGGATTAATCAAAATCCTCAAAACCTTCTTAGCTACAAGGGATTGATTAAACCTTCTAAAACTTTAAATCCCATACCTCCCCATCTCTTTGGCTGGCAAACAAGCTCCCACCGAGCCCAATGAATGTTGGATTTTAAAGGAGATGAACCCCACCAAAATTTGGCTATAGCTTGTGAAAGCTTAGAACAGAGCCCATTTGGAAATCTAACACAGGACATAACATATGTCGGGATAGCTTGGGCAACTGCTTTTATAAGGACCTCCTTTCCTACGATCCAGAAAAAATTACTCTTCCAATTACCAACAGCCTTTAGAATTTTCTCCTTAACATAGTTGAGATCCAGAGTTCTGTTTCTTGAGAAATGAGACGATAAGCCCAGGTATAAACCCAGATTTGATACAACATTAACTTGAAGACATCTAGCAAAATAATTCTTTGTATTCAAATGAGGAGTTAATACACTGGCCCGATCCTTTTTCATAAGATCTTAAAATATCTTTGATGACCAACACTTCCTGGATCAAAGCTATACAGAATAGAAGACTAAAAAAGAAAAAAAAAAAAAGGAGAAATAATAGGGCTTTTGCTAGTTAAAGGGATCTTCAATAATCTATAATAGGTAGGGTATTTAATGAATTAGCTATTTGTATATTCTACAAGAGTAATATTTGAGTAATCCAATTTATTCAAAAACTGTGAAATATTGAATTTGCTGATAAAAGGCGGCGATGAAGACGTCGGAGGCTTCAACGACGCTGATTTTGGAGAAGGGGAGAAGAGAGAATCGAAGGAAAAGAAGTAG

mRNA sequence

ATGGCGGGAATTAAGGAATTCAAGTTTATCACCCATTTTCCATCTTTGCCAGCATGGATCACAAGCTTGGCATCTGATTCGATACAAGCTGATGACAACTCCATCTCAAAAGCAAGGCGGATCCCTCTGATAATGGCTAGCGATTCTGCAGCAAAAGCATCATACTTAGCTGTTAGGGAAAAGGCATCACAGAAGACGCATAAGCTGTTGTGGTCTCGAAGCACCACATCAATCCCCGTTCTACAATTGTCGTCGACTGAGAGAGAAAAAGTCCCCAATGTAGGAGGAGACAAAAAACGATCTGGAGGCATTTGGTTGTTTGAGCAATTATTGGAGCAGTGCCATAGATGGGGTTTCTATTCTGATAGTCAGTCATGCGGCGATGAAGACGTCGGAGGCTTCAACGACGCTGATTTTGGAGAAGGGGAGAAGAGAGAATCGAAGGAAAAGAAGTAG

Coding sequence (CDS)

ATGGCGGGAATTAAGGAATTCAAGTTTATCACCCATTTTCCATCTTTGCCAGCATGGATCACAAGCTTGGCATCTGATTCGATACAAGCTGATGACAACTCCATCTCAAAAGCAAGGCGGATCCCTCTGATAATGGCTAGCGATTCTGCAGCAAAAGCATCATACTTAGCTGTTAGGGAAAAGGCATCACAGAAGACGCATAAGCTGTTGTGGTCTCGAAGCACCACATCAATCCCCGTTCTACAATTGTCGTCGACTGAGAGAGAAAAAGTCCCCAATGTAGGAGGAGACAAAAAACGATCTGGAGGCATTTGGTTGTTTGAGCAATTATTGGAGCAGTGCCATAGATGGGGTTTCTATTCTGATAGTCAGTCATGCGGCGATGAAGACGTCGGAGGCTTCAACGACGCTGATTTTGGAGAAGGGGAGAAGAGAGAATCGAAGGAAAAGAAGTAG

Protein sequence

MAGIKEFKFITHFPSLPAWITSLASDSIQADDNSISKARRIPLIMASDSAAKASYLAVREKASQKTHKLLWSRSTTSIPVLQLSSTEREKVPNVGGDKKRSGGIWLFEQLLEQCHRWGFYSDSQSCGDEDVGGFNDADFGEGEKRESKEKK
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..151

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0017840.1Sed0017840.1mRNA