Sed0017490 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CATTTCTTGAAAACCAAGAAACACAAACTCAGTGAATTCTTTGCTTTCCCCATGGGAAACTGTTTGAGGAGCAACAAAGTTACGGCGTATTCGCCCGCCGAGCAAGCGAAGAAGGTAGAGCGCATCGTCCCGGCTACTGGATCGGCGATCGGCGAGAAGCGAGAAGCGAGTGGCAGCGACGGCGGTGCCGGGATTGGTAGAGTGGTGAGGATTAAAGTGGTGATGTCTTGGAAAGAGTTGGAGCGGATTTTGAAGGATGGAGAGAATGATTGTGGTAGTTTTGAGAAATTGATTGGTGAATTGATGGTTAAAGGCAGGACGAGGATGGTTGTTTCAGATGCTGGAGTTGAAGAAGCTGTTGAGGATGAAAATGGAAGATGGAGTCCGGCTTTGGAAAGTATTCCCGAACATATAAATTAA CATTTCTTGAAAACCAAGAAACACAAACTCAGTGAATTCTTTGCTTTCCCCATGGGAAACTGTTTGAGGAGCAACAAAGTTACGGCGTATTCGCCCGCCGAGCAAGCGAAGAAGGTAGAGCGCATCGTCCCGGCTACTGGATCGGCGATCGGCGAGAAGCGAGAAGCGAGTGGCAGCGACGGCGGTGCCGGGATTGGTAGAGTGGTGAGGATTAAAGTGGTGATGTCTTGGAAAGAGTTGGAGCGGATTTTGAAGGATGGAGAGAATGATTGTGGTAGTTTTGAGAAATTGATTGGTGAATTGATGGTTAAAGGCAGGACGAGGATGGTTGTTTCAGATGCTGGAGTTGAAGAAGCTGTTGAGGATGAAAATGGAAGATGGAGTCCGGCTTTGGAAAGTATTCCCGAACATATAAATTAA ATGGGAAACTGTTTGAGGAGCAACAAAGTTACGGCGTATTCGCCCGCCGAGCAAGCGAAGAAGGTAGAGCGCATCGTCCCGGCTACTGGATCGGCGATCGGCGAGAAGCGAGAAGCGAGTGGCAGCGACGGCGGTGCCGGGATTGGTAGAGTGGTGAGGATTAAAGTGGTGATGTCTTGGAAAGAGTTGGAGCGGATTTTGAAGGATGGAGAGAATGATTGTGGTAGTTTTGAGAAATTGATTGGTGAATTGATGGTTAAAGGCAGGACGAGGATGGTTGTTTCAGATGCTGGAGTTGAAGAAGCTGTTGAGGATGAAAATGGAAGATGGAGTCCGGCTTTGGAAAGTATTCCCGAACATATAAATTAA MGNCLRSNKVTAYSPAEQAKKVERIVPATGSAIGEKREASGSDGGAGIGRVVRIKVVMSWKELERILKDGENDCGSFEKLIGELMVKGRTRMVVSDAGVEEAVEDENGRWSPALESIPEHIN Homology
BLAST of Sed0017490 vs. NCBI nr
Match: XP_038902397.1 (uncharacterized protein LOC120089037 [Benincasa hispida]) HSP 1 Score: 97.1 bits (240), Expect = 1.2e-16 Identity = 66/140 (47.14%), Postives = 81/140 (57.86%), Query Frame = 0
BLAST of Sed0017490 vs. NCBI nr
Match: XP_022140639.1 (uncharacterized protein LOC111011249 [Momordica charantia]) HSP 1 Score: 89.0 bits (219), Expect = 3.1e-14 Identity = 65/151 (43.05%), Postives = 84/151 (55.63%), Query Frame = 0
BLAST of Sed0017490 vs. NCBI nr
Match: KAG6570883.1 (hypothetical protein SDJN03_29798, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 86.3 bits (212), Expect = 2.0e-13 Identity = 69/156 (44.23%), Postives = 83/156 (53.21%), Query Frame = 0
BLAST of Sed0017490 vs. NCBI nr
Match: TYK24218.1 (hypothetical protein E5676_scaffold27G00200 [Cucumis melo var. makuwa]) HSP 1 Score: 71.6 bits (174), Expect = 5.2e-09 Identity = 61/154 (39.61%), Postives = 73/154 (47.40%), Query Frame = 0
BLAST of Sed0017490 vs. NCBI nr
Match: KGN63254.1 (hypothetical protein Csa_022493 [Cucumis sativus]) HSP 1 Score: 68.6 bits (166), Expect = 4.4e-08 Identity = 43/85 (50.59%), Postives = 52/85 (61.18%), Query Frame = 0
BLAST of Sed0017490 vs. ExPASy TrEMBL
Match: A0A6J1CG85 (uncharacterized protein LOC111011249 OS=Momordica charantia OX=3673 GN=LOC111011249 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 1.5e-14 Identity = 65/151 (43.05%), Postives = 84/151 (55.63%), Query Frame = 0
BLAST of Sed0017490 vs. ExPASy TrEMBL
Match: A0A5D3DKZ8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00200 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 2.5e-09 Identity = 61/154 (39.61%), Postives = 73/154 (47.40%), Query Frame = 0
BLAST of Sed0017490 vs. ExPASy TrEMBL
Match: A0A0A0LQE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418890 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 2.1e-08 Identity = 43/85 (50.59%), Postives = 52/85 (61.18%), Query Frame = 0
BLAST of Sed0017490 vs. ExPASy TrEMBL
Match: A0A5B7A6T3 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_020796 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 9.9e-06 Identity = 44/143 (30.77%), Postives = 74/143 (51.75%), Query Frame = 0
BLAST of Sed0017490 vs. ExPASy TrEMBL
Match: A0A4V3WQ11 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_029836 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 2.9e-05 Identity = 43/139 (30.94%), Postives = 66/139 (47.48%), Query Frame = 0
BLAST of Sed0017490 vs. TAIR 10
Match: AT3G21680.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 49.7 bits (117), Expect = 2.0e-06 Identity = 42/122 (34.43%), Postives = 60/122 (49.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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