Sed0016977 (gene) Chayote v1

Overview


Name	Sed0016977
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Germin-like protein
Location	LG03: 6333437 .. 6335228 (-)
RNA-Seq Expression	Sed0016977
Synteny	Sed0016977

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGTAGGTGAAGGTTAATAAATATATATTATTTCAATCAATATAAATAAACTATAGTTTTTGCCTCTTCTTTCACCAAACCCCCTTTGGAGATCAAACATTCTCTTAACTTTATTGGGCAATCCTTTTGGCTGTTTTTTCCTGCTTTCTTATTGATATATCTTTCCATATAATCCAGCAATGGCTAGATCCAAAGTTTTTGTGTTCTTAGTCATGTTTGTTATCGCTGCAACGATTCCCGACTTATGTGCTTCTGATCCCGACGCGCTCCAGGACTTATGCGTCGCTGCTCCCTCTAAAGGTATGTATGTAGTTAATGTACTTAACGTATATGTGTATTATAAGTGGTATAATTTGATGAATACTTATCTTGACTAATCAATAAGAACTCATGCTGGCTGGAATGAATGAAGGCAATGCCAATATAATTGTTTGATGAAATTTTGAGATTAAATATCTGGAGTTATTCAATGCTTCTACATTTCCATCATCAACTCTAAGTTTTGATCTTACACAGTCGATTGATTTGTTTATAAGAAATTTTCTTTAGCAATTTCTATATGTAAAAATTGACCAATATAATTCAAATGTAAAATTGAAACTTTTGAAAACGTTAAAAGATTAAAATTATTTAGCTTTGTGCCCTATTAAATATTTGGATTTTTTTTTTGTCAAATTCAACAACATAAATGATAGTGGAGGAATTTGATCCCCAATATCGTATAATTGTATATATAAGGAAGTTCAAACATCAGCTAGCCTAGAAATAATAATGGACACAAACCCATTTGAAAATTTAGAGCTTTAATTTCTTGAAACTTTTCCAGCTATACCAAACTTGCTACTTTGTTTTTTAATCAAAATAATATAAGGTACAAGATTAAAAAATTACTTATGATTTTACTTGATTTCTCACAATACAATGTAATTGCTAGTTGACAATGTATTAAATTGATATCTAACATCTTAACCAGATTCAGAAAAGTTGTATGATCCACTAAAAAAACAATTAATCCATATCATATTATACTCCATAATTGTCACACACGCACACAATAGGTGCAAAAGTGAATGGATTCCCATGCAAGGAAGAGGCCAACATAACAGCCGCAGACTTCTTCTTCGCCGGGCTAGCAAACCCCGCCACCATCAACAACTCAGCCGGATCCGCCGTGACGCCGGCCAACGTCGACAAAATTCCCGGCCTGAACACCCTCAGCATCTCCCTCGCCCGCATCGACTACGCCCCGGACGGTGGCACGAATCCCCCGCACACGCACCCACGCGCCACCGAGATGGTCTTCGTCCTCGAGGGAGAGCTCGACGTCGGGTTCATCACCACAGCCAACAAACACATTTCCAAGACCATAAAAAAGGGCGAGGTCTTTGTCTTCCCCAAGGGCCTGCTCCACTTCCAGCAGAACACAAAGGATAAACCTGCTTCCGTCGTCGCCGCCTTCAACAGCCAGCTGCCCGGAACCGTGTCGGTCGCCACCGCATTGTTTGGCGCCTCCCCCGCCGTGGACGACGGCGTCCTTGCCAAGGCTTTCCAGATTGGAGCAGATGAGGTGGGGGAGATTAAATCCAAGATTGCGGCCCCGAAGAAGCATTGATTTTTGTTGGATTAATTGTTGTTGTTTTTACTTAGTAATTGGCCTATGGTCAATGAGGAATAATTCTGTTTGGATTATACGGATTGTTTAGTATTACCTATTTTTGAATTTATAACTTTTTAATTTCACAATGTTTCCATTGATGACTACACTTTTAATTCGATTCATTTTGTTCGGCA

mRNA sequence

AAGGTAGGTGAAGGTTAATAAATATATATTATTTCAATCAATATAAATAAACTATAGTTTTTGCCTCTTCTTTCACCAAACCCCCTTTGGAGATCAAACATTCTCTTAACTTTATTGGGCAATCCTTTTGGCTGTTTTTTCCTGCTTTCTTATTGATATATCTTTCCATATAATCCAGCAATGGCTAGATCCAAAGTTTTTGTGTTCTTAGTCATGTTTGTTATCGCTGCAACGATTCCCGACTTATGTGCTTCTGATCCCGACGCGCTCCAGGACTTATGCGTCGCTGCTCCCTCTAAAGGTGCAAAAGTGAATGGATTCCCATGCAAGGAAGAGGCCAACATAACAGCCGCAGACTTCTTCTTCGCCGGGCTAGCAAACCCCGCCACCATCAACAACTCAGCCGGATCCGCCGTGACGCCGGCCAACGTCGACAAAATTCCCGGCCTGAACACCCTCAGCATCTCCCTCGCCCGCATCGACTACGCCCCGGACGGTGGCACGAATCCCCCGCACACGCACCCACGCGCCACCGAGATGGTCTTCGTCCTCGAGGGAGAGCTCGACGTCGGGTTCATCACCACAGCCAACAAACACATTTCCAAGACCATAAAAAAGGGCGAGGTCTTTGTCTTCCCCAAGGGCCTGCTCCACTTCCAGCAGAACACAAAGGATAAACCTGCTTCCGTCGTCGCCGCCTTCAACAGCCAGCTGCCCGGAACCGTGTCGGTCGCCACCGCATTGTTTGGCGCCTCCCCCGCCGTGGACGACGGCGTCCTTGCCAAGGCTTTCCAGATTGGAGCAGATGAGGTGGGGGAGATTAAATCCAAGATTGCGGCCCCGAAGAAGCATTGATTTTTGTTGGATTAATTGTTGTTGTTTTTACTTAGTAATTGGCCTATGGTCAATGAGGAATAATTCTGTTTGGATTATACGGATTGTTTAGTATTACCTATTTTTGAATTTATAACTTTTTAATTTCACAATGTTTCCATTGATGACTACACTTTTAATTCGATTCATTTTGTTCGGCA

Coding sequence (CDS)

ATGGCTAGATCCAAAGTTTTTGTGTTCTTAGTCATGTTTGTTATCGCTGCAACGATTCCCGACTTATGTGCTTCTGATCCCGACGCGCTCCAGGACTTATGCGTCGCTGCTCCCTCTAAAGGTGCAAAAGTGAATGGATTCCCATGCAAGGAAGAGGCCAACATAACAGCCGCAGACTTCTTCTTCGCCGGGCTAGCAAACCCCGCCACCATCAACAACTCAGCCGGATCCGCCGTGACGCCGGCCAACGTCGACAAAATTCCCGGCCTGAACACCCTCAGCATCTCCCTCGCCCGCATCGACTACGCCCCGGACGGTGGCACGAATCCCCCGCACACGCACCCACGCGCCACCGAGATGGTCTTCGTCCTCGAGGGAGAGCTCGACGTCGGGTTCATCACCACAGCCAACAAACACATTTCCAAGACCATAAAAAAGGGCGAGGTCTTTGTCTTCCCCAAGGGCCTGCTCCACTTCCAGCAGAACACAAAGGATAAACCTGCTTCCGTCGTCGCCGCCTTCAACAGCCAGCTGCCCGGAACCGTGTCGGTCGCCACCGCATTGTTTGGCGCCTCCCCCGCCGTGGACGACGGCGTCCTTGCCAAGGCTTTCCAGATTGGAGCAGATGAGGTGGGGGAGATTAAATCCAAGATTGCGGCCCCGAAGAAGCATTGA

Protein sequence

MARSKVFVFLVMFVIAATIPDLCASDPDALQDLCVAAPSKGAKVNGFPCKEEANITAADFFFAGLANPATINNSAGSAVTPANVDKIPGLNTLSISLARIDYAPDGGTNPPHTHPRATEMVFVLEGELDVGFITTANKHISKTIKKGEVFVFPKGLLHFQQNTKDKPASVVAAFNSQLPGTVSVATALFGASPAVDDGVLAKAFQIGADEVGEIKSKIAAPKKH

Homology

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BLAST of Sed0016977 vs. NCBI nr
Match: XP_038877903.1 (germin-like protein subfamily 2 member 4 [Benincasa hispida] >XP_038877904.1 germin-like protein subfamily 2 member 4 [Benincasa hispida])

HSP 1 Score: 359.0 bits (920), Expect = 3.0e-95
Identity = 182/223 (81.61%), Postives = 195/223 (87.44%), Query Frame = 0


Query: 1   MARSKVFVFLVMFVIAATIPDLCASDPDALQDLCVAAPSKGAKVNGFPCKEEANITAADF 60
           M  SKV VFLV+F+ A TIP   AS+PDALQDLCVA  SKG KVNGFPCKE+ NITA+DF
Sbjct: 1   MDASKVLVFLVLFIAATTIPGFHASEPDALQDLCVAETSKGIKVNGFPCKEDTNITASDF 60

Query: 61  FFAGLANPATINNSAGSAVTPANVDKIPGLNTLSISLARIDYAPDGGTNPPHTHPRATEM 120
           FFAGLA PA INNS GSAVT ANVDKIPGLNTL IS ARIDY+PDGG NPPH HPRATE+
Sbjct: 61  FFAGLAKPAAINNSVGSAVTLANVDKIPGLNTLGISFARIDYSPDGGLNPPHIHPRATEI 120

Query: 121 VFVLEGELDVGFITTANKHISKTIKKGEVFVFPKGLLHFQQNTKDKPASVVAAFNSQLPG 180
           VFVL+GELDVGFITTANK ISKTIKKGE+FVFPKGLLHFQQN KDKPASV+AAFNSQLPG
Sbjct: 121 VFVLDGELDVGFITTANKLISKTIKKGEIFVFPKGLLHFQQNKKDKPASVIAAFNSQLPG 180

Query: 181 TVSVATALFGASPAVDDGVLAKAFQIGADEVGEIKSKIAAPKK 224
           T+SVA ALF +SP VDDGVLA+ FQIGADEVGEIKSKIA  KK
Sbjct: 181 TLSVAAALFSSSPPVDDGVLARTFQIGADEVGEIKSKIAPKKK 223

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BLAST of Sed0016977 vs. NCBI nr
Match: XP_008466192.1 (PREDICTED: germin-like protein subfamily 2 member 4 [Cucumis melo])

HSP 1 Score: 359.0 bits (920), Expect = 3.0e-95
Identity = 179/223 (80.27%), Postives = 193/223 (86.55%), Query Frame = 0


Query: 1   MARSKVFVFLVMFVIAATIPDLCASDPDALQDLCVAAPSKGAKVNGFPCKEEANITAADF 60
           M  SK  VFL +F+ A TIP  CASDPD LQDLCVA  SKG KVNGFPCK   N+T +DF
Sbjct: 1   MDASKALVFLALFIAATTIPRSCASDPDLLQDLCVAETSKGTKVNGFPCKAATNVTTSDF 60

Query: 61  FFAGLANPATINNSAGSAVTPANVDKIPGLNTLSISLARIDYAPDGGTNPPHTHPRATEM 120
           FFAGLANPA INNS GSAVTPANVDKIPGLNTL +SLARIDY+P+GG NPPH HPRATE+
Sbjct: 61  FFAGLANPAAINNSVGSAVTPANVDKIPGLNTLGVSLARIDYSPNGGLNPPHIHPRATEI 120

Query: 121 VFVLEGELDVGFITTANKHISKTIKKGEVFVFPKGLLHFQQNTKDKPASVVAAFNSQLPG 180
           VF+L+GELDVGFITTANK ISKTIKKGEVFVFPKGLLHFQQN KDKPASV++AFNSQLPG
Sbjct: 121 VFILDGELDVGFITTANKLISKTIKKGEVFVFPKGLLHFQQNKKDKPASVLSAFNSQLPG 180

Query: 181 TVSVATALFGASPAVDDGVLAKAFQIGADEVGEIKSKIAAPKK 224
           TVSVA ALF +SPAVDDG+LAK FQIG DEVGEIKSKIA  KK
Sbjct: 181 TVSVAAALFSSSPAVDDGLLAKTFQIGTDEVGEIKSKIAPKKK 223

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BLAST of Sed0016977 vs. NCBI nr
Match: XP_022993950.1 (germin-like protein subfamily 2 member 2 [Cucurbita maxima])

HSP 1 Score: 352.4 bits (903), Expect = 2.8e-93
Identity = 182/224 (81.25%), Postives = 197/224 (87.95%), Query Frame = 0


Query: 1   MARSKVFVFLVMFVIAATI-PDLCASDPDALQDLCVAAPSKGAKVNGFPCKEEANITAAD 60
           M  SKVFVFL + + +A I PD  ASDPDALQDLC+A  SKG KVNGFPCKE+ANITAAD
Sbjct: 1   MNPSKVFVFLFLVMSSAAIFPDSHASDPDALQDLCIADTSKGTKVNGFPCKEDANITAAD 60

Query: 61  FFFAGLANPATINNSAGSAVTPANVDKIPGLNTLSISLARIDYAPDGGTNPPHTHPRATE 120
           FFF GLAN ATINNS GS VTPANV+KIPGLNTL +SLARIDYA DGG NPPH HPRATE
Sbjct: 61  FFFTGLANAATINNSVGSTVTPANVNKIPGLNTLGVSLARIDYAADGGLNPPHVHPRATE 120

Query: 121 MVFVLEGELDVGFITTANKHISKTIKKGEVFVFPKGLLHFQQNTKDKPASVVAAFNSQLP 180
           +VFVL+GELDVGFITTANK ISKTIKKGE+FVFPKGLLHFQQN KDKPASV+AAFNSQLP
Sbjct: 121 IVFVLDGELDVGFITTANKLISKTIKKGEIFVFPKGLLHFQQNNKDKPASVIAAFNSQLP 180

Query: 181 GTVSVATALFGASPAVDDGVLAKAFQIGADEVGEIKSKIAAPKK 224
           GTVSVA ALF +SPAVD+GVLA+AFQI A+ VGEIKSKIAA KK
Sbjct: 181 GTVSVAAALFSSSPAVDNGVLARAFQIDAEVVGEIKSKIAAKKK 224

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BLAST of Sed0016977 vs. NCBI nr
Match: XP_022938623.1 (germin-like protein subfamily 2 member 4 [Cucurbita moschata])

HSP 1 Score: 352.1 bits (902), Expect = 3.6e-93
Identity = 182/224 (81.25%), Postives = 195/224 (87.05%), Query Frame = 0


Query: 1   MARSKVFVFLVMFVIAATI-PDLCASDPDALQDLCVAAPSKGAKVNGFPCKEEANITAAD 60
           M  SKVFVFL + + +A I P   ASDPDALQDLC+A  SKG KVNGFPCKE+ANITAAD
Sbjct: 1   MNPSKVFVFLFLVLSSAAIFPGSRASDPDALQDLCIADTSKGTKVNGFPCKEDANITAAD 60

Query: 61  FFFAGLANPATINNSAGSAVTPANVDKIPGLNTLSISLARIDYAPDGGTNPPHTHPRATE 120
           FFF GLAN ATINNS GS VTPANVDKIPGLNTL +SLARIDYA DGG NPPH HPRATE
Sbjct: 61  FFFTGLANAATINNSVGSTVTPANVDKIPGLNTLGVSLARIDYAADGGLNPPHVHPRATE 120

Query: 121 MVFVLEGELDVGFITTANKHISKTIKKGEVFVFPKGLLHFQQNTKDKPASVVAAFNSQLP 180
           +VFVL+GELDVG ITTANK ISKTIKKGE+FVFPKGLLHFQQN KDKPASV+AAFNSQLP
Sbjct: 121 IVFVLDGELDVGIITTANKLISKTIKKGEIFVFPKGLLHFQQNNKDKPASVIAAFNSQLP 180

Query: 181 GTVSVATALFGASPAVDDGVLAKAFQIGADEVGEIKSKIAAPKK 224
           GTVSVA ALF +SPAVDDGVLA+AFQI + EVGEIKSKIAA KK
Sbjct: 181 GTVSVAAALFSSSPAVDDGVLARAFQIDSQEVGEIKSKIAAKKK 224

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BLAST of Sed0016977 vs. NCBI nr
Match: XP_022146354.1 (germin-like protein subfamily 2 member 4 [Momordica charantia])

HSP 1 Score: 351.7 bits (901), Expect = 4.8e-93
Identity = 178/224 (79.46%), Postives = 195/224 (87.05%), Query Frame = 0


Query: 1   MARSKVFVFL-VMFVIAATIPDLCASDPDALQDLCVAAPSKGAKVNGFPCKEEANITAAD 60
           MA SK+F+F  ++F   ATIP L ASDPD LQDLCVAAPSKG KVNGFPCK+EAN+TA D
Sbjct: 5   MAESKIFIFFTILFAATATIPRLLASDPDLLQDLCVAAPSKGIKVNGFPCKDEANVTALD 64

Query: 61  FFFAGLANPATINNSAGSAVTPANVDKIPGLNTLSISLARIDYAPDGGTNPPHTHPRATE 120
           FFFAGLAN A INNS GSAVT ANVDKIPGLNTL +SLAR+DY+P GG NPPH HPRATE
Sbjct: 65  FFFAGLANAAAINNSVGSAVTAANVDKIPGLNTLGVSLARVDYSPAGGLNPPHVHPRATE 124

Query: 121 MVFVLEGELDVGFITTANKHISKTIKKGEVFVFPKGLLHFQQNTKDKPASVVAAFNSQLP 180
           +VFVL+GELDVGFITTANK ++KTIKKGEVFVFPKGLLHFQ+N+KDKPASV+AAFNSQLP
Sbjct: 125 IVFVLDGELDVGFITTANKLVAKTIKKGEVFVFPKGLLHFQRNSKDKPASVIAAFNSQLP 184

Query: 181 GTVSVATALFGASPAVDDGVLAKAFQIGADEVGEIKSKIAAPKK 224
           GT SVA ALFGASPAVDD VLA AFQIG   VG+IKSKIA  KK
Sbjct: 185 GTQSVAAALFGASPAVDDAVLAGAFQIGGVVVGQIKSKIAPKKK 228

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BLAST of Sed0016977 vs. ExPASy Swiss-Prot
Match: Q9M263 (Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana OX=3702 GN=GLP10 PE=2 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.8e-74
Identity = 142/201 (70.65%), Postives = 165/201 (82.09%), Query Frame = 0


Query: 24  ASDPDALQDLCVAAPSKGAKVNGFPCKEEANITAADFFFAGLANPATINNSAGSAVTPAN 83
           A DPD LQDLCVA  + G KVNGF CK E+NITA+DFFFAG+  PA +NN+ GSAVT AN
Sbjct: 21  AYDPDTLQDLCVADRTSGIKVNGFTCKPESNITASDFFFAGIGKPAVVNNTVGSAVTGAN 80

Query: 84  VDKIPGLNTLSISLARIDYAPDGGTNPPHTHPRATEMVFVLEGELDVGFITTANKHISKT 143
           V+KI GLNTL +SLARIDYAP GG NPPHTHPRATE++FVLEGELDVGFITTANK  +KT
Sbjct: 81  VEKIAGLNTLGVSLARIDYAP-GGLNPPHTHPRATEVIFVLEGELDVGFITTANKLFAKT 140

Query: 144 IKKGEVFVFPKGLLHFQQNT-KDKPASVVAAFNSQLPGTVSVATALFGASPAVDDGVLAK 203
           +KKGEVFVFP+GL+H+Q+N  K KPASV++AFNSQLPGT S+A  LF A+PA+ D VL  
Sbjct: 141 VKKGEVFVFPRGLIHYQKNNDKAKPASVISAFNSQLPGTQSIAATLFTATPAIPDHVLTT 200

Query: 204 AFQIGADEVGEIKSKIAAPKK 224
            FQIG  E+ +IKSK  APKK
Sbjct: 201 TFQIGTKEIEKIKSKF-APKK 219

[Close]

BLAST of Sed0016977 vs. ExPASy Swiss-Prot
Match: Q9FZ27 (Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana OX=3702 GN=At1g02335 PE=2 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 2.3e-74
Identity = 143/222 (64.41%), Postives = 173/222 (77.93%), Query Frame = 0


Query: 1   MARSKVFVFLVMFVIAATIPDLCASDPDALQDLCVAAPSKGAKVNGFPCKEEANITAADF 60
           M  S++ + + +  I  T   + A DPDALQDLCVA  S G K+NGFPCKE  NIT +DF
Sbjct: 1   MMNSRISIIIALSCIMIT--SIRAYDPDALQDLCVADKSHGTKLNGFPCKETLNITESDF 60

Query: 61  FFAGLANPATINNSAGSAVTPANVDKIPGLNTLSISLARIDYAPDGGTNPPHTHPRATEM 120
           FFAG++ PA IN++ GSAVT ANV+KIPGLNTLS+SLARIDYAP GG NPPHTHPRATE+
Sbjct: 61  FFAGISKPAVINSTMGSAVTGANVEKIPGLNTLSVSLARIDYAP-GGLNPPHTHPRATEV 120

Query: 121 VFVLEGELDVGFITTANKHISKTIKKGEVFVFPKGLLHFQQNTKDKPASVVAAFNSQLPG 180
           V+VLEGEL+VGFITTANK  +KTIK GEVFVFP+GL+HFQ+N    PASV++AFNSQLPG
Sbjct: 121 VYVLEGELEVGFITTANKLFTKTIKIGEVFVFPRGLVHFQKNNGKSPASVLSAFNSQLPG 180

Query: 181 TVSVATALFGASPAVDDGVLAKAFQIGADEVGEIKSKIAAPK 223
           T SVA  LF A PA+ + VL K FQ+G+  V +IK ++A  K
Sbjct: 181 TASVAATLFAAEPALPEDVLTKTFQVGSKMVDKIKERLATKK 219

[Close]

BLAST of Sed0016977 vs. ExPASy Swiss-Prot
Match: Q6I544 (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0277500 PE=2 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 4.2e-68
Identity = 139/224 (62.05%), Postives = 167/224 (74.55%), Query Frame = 0


Query: 1   MARSKVFVFLVMFVIAATIP-DLCASDPDALQDLCVAAPSKGAKVNGFPCKEEANITAAD 60
           MAR  +   +V  ++ A +P    A DPD LQD+CVA  +   KVNGF CK  A +T  D
Sbjct: 1   MARPSLPCAVVAVLLLALLPTPSTAGDPDLLQDICVADLTSAVKVNGFACK--AAVTEDD 60

Query: 61  FFFAGLANPATINNSAGSAVTPANVDKIPGLNTLSISLARIDYAPDGGTNPPHTHPRATE 120
           F+F GLA     NN+ GS VT ANV+K+PGLNTL +S++RIDYAP GG NPPHTHPRATE
Sbjct: 61  FYFKGLAAAGNTNNTYGSVVTGANVEKLPGLNTLGVSMSRIDYAP-GGLNPPHTHPRATE 120

Query: 121 MVFVLEGELDVGFITTANKHISKTIKKGEVFVFPKGLLHFQQNTKDKPASVVAAFNSQLP 180
           MVFVL+G LDVGFITTANK  +KTI  G+VFVFP+GLLHFQ+N  D PA+V++AFNSQLP
Sbjct: 121 MVFVLQGTLDVGFITTANKLYTKTISAGDVFVFPRGLLHFQKNNGDTPAAVISAFNSQLP 180

Query: 181 GTVSVATALFGASPAVDDGVLAKAFQIGADEVGEIKSKIAAPKK 224
           GT S+A  LF ASP V DGVL KAFQ+G  EV +IKS++ APKK
Sbjct: 181 GTQSLAMTLFAASPEVPDGVLTKAFQVGTKEVEKIKSRL-APKK 220

[Close]

BLAST of Sed0016977 vs. ExPASy Swiss-Prot
Match: P94014 (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana OX=3702 GN=GLP4 PE=2 SV=2)

HSP 1 Score: 257.7 bits (657), Expect = 1.2e-67
Identity = 135/223 (60.54%), Postives = 165/223 (73.99%), Query Frame = 0


Query: 1   MARSKVFVFLVMFVIAATIPDLCASDPDALQDLCVAAPSKGAKVNGFPCKEEANITAADF 60
           MA   + + L++  ++  I    ++DPD LQDLCVA    G K+NGFPCK+ A +T+ADF
Sbjct: 1   MASPTLTLLLLLTTVSFFISS--SADPDMLQDLCVADLPSGIKINGFPCKDAATVTSADF 60

Query: 61  FFAGLANPATINNSAGSAVTPANVDKIPGLNTLSISLARIDYAPDGGTNPPHTHPRATEM 120
           F  GLA P   NN+ G+ VT ANV  IPGLNTL +SL+RIDYAP GG NPPHTHPRATE+
Sbjct: 61  FSQGLAKPGLTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAP-GGLNPPHTHPRATEV 120

Query: 121 VFVLEGELDVGFITTANKHISKTIKKGEVFVFPKGLLHFQQNTKDKPASVVAAFNSQLPG 180
           VFVLEG LDVGF+TTANK IS+++KKG+VF FPKGL+HFQ+N  D PASV+AAFNSQLPG
Sbjct: 121 VFVLEGTLDVGFLTTANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPG 180

Query: 181 TVSVATALFGASPAVDDGVLAKAFQIGADEVGEIKSKIAAPKK 224
           T S+   LFG++P V D +LA+AFQ     V  IKSK   PKK
Sbjct: 181 TQSLGATLFGSTPPVPDNILAQAFQTSPGTVKHIKSKF-QPKK 219

[Close]

BLAST of Sed0016977 vs. ExPASy Swiss-Prot
Match: Q9SPV5 (Nectarin-1 OS=Nicotiana plumbaginifolia OX=4092 GN=NEC1 PE=1 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 4.7e-67
Identity = 137/225 (60.89%), Postives = 165/225 (73.33%), Query Frame = 0


Query: 3   RSKVFVFL---VMFVIAATIPDLC-ASDPDALQDLCVAAPSKGAKVNGFPCKEEANITAA 62
           +SK+F  +   ++F+ A +I   C A+D D LQD+CVA      KVNGFPCK   N TAA
Sbjct: 7   KSKIFQIMEMTILFLFAISIDRYCFAADEDMLQDVCVADLHSKVKVNGFPCK--TNFTAA 66

Query: 63  DFFFAGLANPATINNSAGSAVTPANVDKIPGLNTLSISLARIDYAPDGGTNPPHTHPRAT 122
           DF    ++ P   NN  GS VT ANV+++PGLNTL +SLARIDYAP GG NPPHTHPRA+
Sbjct: 67  DFSSFAISKPGATNNKFGSKVTTANVEQVPGLNTLGVSLARIDYAP-GGINPPHTHPRAS 126

Query: 123 EMVFVLEGELDVGFITTANKHISKTIKKGEVFVFPKGLLHFQQNTKDKPASVVAAFNSQL 182
           EMVFV+EGELDVGFITTAN  +SK I KGEVFVFP+GL+HFQ+N    PA+VV+AFNSQL
Sbjct: 127 EMVFVMEGELDVGFITTANVLVSKQITKGEVFVFPRGLVHFQKNNGKIPAAVVSAFNSQL 186

Query: 183 PGTVSVATALFGASPAVDDGVLAKAFQIGADEVGEIKSKIAAPKK 224
           PGT S+   LFGASP V D VLA+ FQI  ++V +IKSK A  KK
Sbjct: 187 PGTQSIPITLFGASPTVPDDVLAQTFQINIEDVQQIKSKFAPAKK 228

[Close]

BLAST of Sed0016977 vs. ExPASy TrEMBL
Match: A0A1S3CQM8 (Germin-like protein OS=Cucumis melo OX=3656 GN=LOC103503679 PE=3 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.4e-95
Identity = 179/223 (80.27%), Postives = 193/223 (86.55%), Query Frame = 0


Query: 1   MARSKVFVFLVMFVIAATIPDLCASDPDALQDLCVAAPSKGAKVNGFPCKEEANITAADF 60
           M  SK  VFL +F+ A TIP  CASDPD LQDLCVA  SKG KVNGFPCK   N+T +DF
Sbjct: 1   MDASKALVFLALFIAATTIPRSCASDPDLLQDLCVAETSKGTKVNGFPCKAATNVTTSDF 60

Query: 61  FFAGLANPATINNSAGSAVTPANVDKIPGLNTLSISLARIDYAPDGGTNPPHTHPRATEM 120
           FFAGLANPA INNS GSAVTPANVDKIPGLNTL +SLARIDY+P+GG NPPH HPRATE+
Sbjct: 61  FFAGLANPAAINNSVGSAVTPANVDKIPGLNTLGVSLARIDYSPNGGLNPPHIHPRATEI 120

Query: 121 VFVLEGELDVGFITTANKHISKTIKKGEVFVFPKGLLHFQQNTKDKPASVVAAFNSQLPG 180
           VF+L+GELDVGFITTANK ISKTIKKGEVFVFPKGLLHFQQN KDKPASV++AFNSQLPG
Sbjct: 121 VFILDGELDVGFITTANKLISKTIKKGEVFVFPKGLLHFQQNKKDKPASVLSAFNSQLPG 180

Query: 181 TVSVATALFGASPAVDDGVLAKAFQIGADEVGEIKSKIAAPKK 224
           TVSVA ALF +SPAVDDG+LAK FQIG DEVGEIKSKIA  KK
Sbjct: 181 TVSVAAALFSSSPAVDDGLLAKTFQIGTDEVGEIKSKIAPKKK 223

[Close]

BLAST of Sed0016977 vs. ExPASy TrEMBL
Match: A0A6J1JZY0 (Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489804 PE=3 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.4e-93
Identity = 182/224 (81.25%), Postives = 197/224 (87.95%), Query Frame = 0


Query: 1   MARSKVFVFLVMFVIAATI-PDLCASDPDALQDLCVAAPSKGAKVNGFPCKEEANITAAD 60
           M  SKVFVFL + + +A I PD  ASDPDALQDLC+A  SKG KVNGFPCKE+ANITAAD
Sbjct: 1   MNPSKVFVFLFLVMSSAAIFPDSHASDPDALQDLCIADTSKGTKVNGFPCKEDANITAAD 60

Query: 61  FFFAGLANPATINNSAGSAVTPANVDKIPGLNTLSISLARIDYAPDGGTNPPHTHPRATE 120
           FFF GLAN ATINNS GS VTPANV+KIPGLNTL +SLARIDYA DGG NPPH HPRATE
Sbjct: 61  FFFTGLANAATINNSVGSTVTPANVNKIPGLNTLGVSLARIDYAADGGLNPPHVHPRATE 120

Query: 121 MVFVLEGELDVGFITTANKHISKTIKKGEVFVFPKGLLHFQQNTKDKPASVVAAFNSQLP 180
           +VFVL+GELDVGFITTANK ISKTIKKGE+FVFPKGLLHFQQN KDKPASV+AAFNSQLP
Sbjct: 121 IVFVLDGELDVGFITTANKLISKTIKKGEIFVFPKGLLHFQQNNKDKPASVIAAFNSQLP 180

Query: 181 GTVSVATALFGASPAVDDGVLAKAFQIGADEVGEIKSKIAAPKK 224
           GTVSVA ALF +SPAVD+GVLA+AFQI A+ VGEIKSKIAA KK
Sbjct: 181 GTVSVAAALFSSSPAVDNGVLARAFQIDAEVVGEIKSKIAAKKK 224

[Close]

BLAST of Sed0016977 vs. ExPASy TrEMBL
Match: A0A6J1FJE7 (Germin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111444803 PE=3 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.8e-93
Identity = 182/224 (81.25%), Postives = 195/224 (87.05%), Query Frame = 0


Query: 1   MARSKVFVFLVMFVIAATI-PDLCASDPDALQDLCVAAPSKGAKVNGFPCKEEANITAAD 60
           M  SKVFVFL + + +A I P   ASDPDALQDLC+A  SKG KVNGFPCKE+ANITAAD
Sbjct: 1   MNPSKVFVFLFLVLSSAAIFPGSRASDPDALQDLCIADTSKGTKVNGFPCKEDANITAAD 60

Query: 61  FFFAGLANPATINNSAGSAVTPANVDKIPGLNTLSISLARIDYAPDGGTNPPHTHPRATE 120
           FFF GLAN ATINNS GS VTPANVDKIPGLNTL +SLARIDYA DGG NPPH HPRATE
Sbjct: 61  FFFTGLANAATINNSVGSTVTPANVDKIPGLNTLGVSLARIDYAADGGLNPPHVHPRATE 120

Query: 121 MVFVLEGELDVGFITTANKHISKTIKKGEVFVFPKGLLHFQQNTKDKPASVVAAFNSQLP 180
           +VFVL+GELDVG ITTANK ISKTIKKGE+FVFPKGLLHFQQN KDKPASV+AAFNSQLP
Sbjct: 121 IVFVLDGELDVGIITTANKLISKTIKKGEIFVFPKGLLHFQQNNKDKPASVIAAFNSQLP 180

Query: 181 GTVSVATALFGASPAVDDGVLAKAFQIGADEVGEIKSKIAAPKK 224
           GTVSVA ALF +SPAVDDGVLA+AFQI + EVGEIKSKIAA KK
Sbjct: 181 GTVSVAAALFSSSPAVDDGVLARAFQIDSQEVGEIKSKIAAKKK 224

[Close]

BLAST of Sed0016977 vs. ExPASy TrEMBL
Match: A0A6J1CXW0 (Germin-like protein OS=Momordica charantia OX=3673 GN=LOC111015585 PE=3 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 2.3e-93
Identity = 178/224 (79.46%), Postives = 195/224 (87.05%), Query Frame = 0


Query: 1   MARSKVFVFL-VMFVIAATIPDLCASDPDALQDLCVAAPSKGAKVNGFPCKEEANITAAD 60
           MA SK+F+F  ++F   ATIP L ASDPD LQDLCVAAPSKG KVNGFPCK+EAN+TA D
Sbjct: 5   MAESKIFIFFTILFAATATIPRLLASDPDLLQDLCVAAPSKGIKVNGFPCKDEANVTALD 64

Query: 61  FFFAGLANPATINNSAGSAVTPANVDKIPGLNTLSISLARIDYAPDGGTNPPHTHPRATE 120
           FFFAGLAN A INNS GSAVT ANVDKIPGLNTL +SLAR+DY+P GG NPPH HPRATE
Sbjct: 65  FFFAGLANAAAINNSVGSAVTAANVDKIPGLNTLGVSLARVDYSPAGGLNPPHVHPRATE 124

Query: 121 MVFVLEGELDVGFITTANKHISKTIKKGEVFVFPKGLLHFQQNTKDKPASVVAAFNSQLP 180
           +VFVL+GELDVGFITTANK ++KTIKKGEVFVFPKGLLHFQ+N+KDKPASV+AAFNSQLP
Sbjct: 125 IVFVLDGELDVGFITTANKLVAKTIKKGEVFVFPKGLLHFQRNSKDKPASVIAAFNSQLP 184

Query: 181 GTVSVATALFGASPAVDDGVLAKAFQIGADEVGEIKSKIAAPKK 224
           GT SVA ALFGASPAVDD VLA AFQIG   VG+IKSKIA  KK
Sbjct: 185 GTQSVAAALFGASPAVDDAVLAGAFQIGGVVVGQIKSKIAPKKK 228

[Close]

BLAST of Sed0016977 vs. ExPASy TrEMBL
Match: A0A0A0KMZ7 (Germin-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G129280 PE=3 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 8.2e-91
Identity = 173/224 (77.23%), Postives = 192/224 (85.71%), Query Frame = 0


Query: 1   MARSKVFVFLVMFVIAATIPDLCASDPDALQDLCVAAPSKGAKVNGFPCKEEANITAADF 60
           M  SK  VFL +F+ A TIP   ASDPD+LQDLCVAA SKG KVNGFPCK++ NITA+DF
Sbjct: 1   MDASKAIVFLALFIAATTIPHSHASDPDSLQDLCVAATSKGTKVNGFPCKDDTNITASDF 60

Query: 61  FFAGLANPATINNSAGSAVTPANVDKIPGLNTLSISLARIDYAPDGGTNPPHTHPRATEM 120
           FFAGLANPA INNS GSAVTPANV+KIPGLNTL +SLARIDY P+ G NPPH HPRATE+
Sbjct: 61  FFAGLANPAAINNSMGSAVTPANVEKIPGLNTLGVSLARIDYLPNDGLNPPHIHPRATEI 120

Query: 121 VFVLEGELDVGF-ITTANKHISKTIKKGEVFVFPKGLLHFQQNTKDKPASVVAAFNSQLP 180
           +F+LEGEL+VGF ITT NK ISKTIKKGEVFVFPKGLLHFQQN KDKPASV++AFNSQLP
Sbjct: 121 IFILEGELEVGFIITTGNKLISKTIKKGEVFVFPKGLLHFQQNKKDKPASVLSAFNSQLP 180

Query: 181 GTVSVATALFGASPAVDDGVLAKAFQIGADEVGEIKSKIAAPKK 224
           GTVS+  ALF +SPAVD+G+LAK FQIG DEV EIKSKIA  KK
Sbjct: 181 GTVSIVAALFSSSPAVDNGILAKTFQIGTDEVEEIKSKIAPKKK 224

[Close]

BLAST of Sed0016977 vs. TAIR 10
Match: AT3G62020.1 (germin-like protein 10 )

HSP 1 Score: 280.4 bits (716), Expect = 1.3e-75
Identity = 142/201 (70.65%), Postives = 165/201 (82.09%), Query Frame = 0


Query: 24  ASDPDALQDLCVAAPSKGAKVNGFPCKEEANITAADFFFAGLANPATINNSAGSAVTPAN 83
           A DPD LQDLCVA  + G KVNGF CK E+NITA+DFFFAG+  PA +NN+ GSAVT AN
Sbjct: 21  AYDPDTLQDLCVADRTSGIKVNGFTCKPESNITASDFFFAGIGKPAVVNNTVGSAVTGAN 80

Query: 84  VDKIPGLNTLSISLARIDYAPDGGTNPPHTHPRATEMVFVLEGELDVGFITTANKHISKT 143
           V+KI GLNTL +SLARIDYAP GG NPPHTHPRATE++FVLEGELDVGFITTANK  +KT
Sbjct: 81  VEKIAGLNTLGVSLARIDYAP-GGLNPPHTHPRATEVIFVLEGELDVGFITTANKLFAKT 140

Query: 144 IKKGEVFVFPKGLLHFQQNT-KDKPASVVAAFNSQLPGTVSVATALFGASPAVDDGVLAK 203
           +KKGEVFVFP+GL+H+Q+N  K KPASV++AFNSQLPGT S+A  LF A+PA+ D VL  
Sbjct: 141 VKKGEVFVFPRGLIHYQKNNDKAKPASVISAFNSQLPGTQSIAATLFTATPAIPDHVLTT 200

Query: 204 AFQIGADEVGEIKSKIAAPKK 224
            FQIG  E+ +IKSK  APKK
Sbjct: 201 TFQIGTKEIEKIKSKF-APKK 219

[Close]

BLAST of Sed0016977 vs. TAIR 10
Match: AT1G02335.1 (germin-like protein subfamily 2 member 2 precursor )

HSP 1 Score: 280.0 bits (715), Expect = 1.6e-75
Identity = 143/222 (64.41%), Postives = 173/222 (77.93%), Query Frame = 0


Query: 1   MARSKVFVFLVMFVIAATIPDLCASDPDALQDLCVAAPSKGAKVNGFPCKEEANITAADF 60
           M  S++ + + +  I  T   + A DPDALQDLCVA  S G K+NGFPCKE  NIT +DF
Sbjct: 1   MMNSRISIIIALSCIMIT--SIRAYDPDALQDLCVADKSHGTKLNGFPCKETLNITESDF 60

Query: 61  FFAGLANPATINNSAGSAVTPANVDKIPGLNTLSISLARIDYAPDGGTNPPHTHPRATEM 120
           FFAG++ PA IN++ GSAVT ANV+KIPGLNTLS+SLARIDYAP GG NPPHTHPRATE+
Sbjct: 61  FFAGISKPAVINSTMGSAVTGANVEKIPGLNTLSVSLARIDYAP-GGLNPPHTHPRATEV 120

Query: 121 VFVLEGELDVGFITTANKHISKTIKKGEVFVFPKGLLHFQQNTKDKPASVVAAFNSQLPG 180
           V+VLEGEL+VGFITTANK  +KTIK GEVFVFP+GL+HFQ+N    PASV++AFNSQLPG
Sbjct: 121 VYVLEGELEVGFITTANKLFTKTIKIGEVFVFPRGLVHFQKNNGKSPASVLSAFNSQLPG 180

Query: 181 TVSVATALFGASPAVDDGVLAKAFQIGADEVGEIKSKIAAPK 223
           T SVA  LF A PA+ + VL K FQ+G+  V +IK ++A  K
Sbjct: 181 TASVAATLFAAEPALPEDVLTKTFQVGSKMVDKIKERLATKK 219

[Close]

BLAST of Sed0016977 vs. TAIR 10
Match: AT3G62020.2 (germin-like protein 10 )

HSP 1 Score: 260.0 bits (663), Expect = 1.8e-69
Identity = 131/184 (71.20%), Postives = 153/184 (83.15%), Query Frame = 0


Query: 41  GAKVNGFPCKEEANITAADFFFAGLANPATINNSAGSAVTPANVDKIPGLNTLSISLARI 100
           G KVNGF CK E+NITA+DFFFAG+  PA +NN+ GSAVT ANV+KI GLNTL +SLARI
Sbjct: 9   GIKVNGFTCKPESNITASDFFFAGIGKPAVVNNTVGSAVTGANVEKIAGLNTLGVSLARI 68

Query: 101 DYAPDGGTNPPHTHPRATEMVFVLEGELDVGFITTANKHISKTIKKGEVFVFPKGLLHFQ 160
           DYAP GG NPPHTHPRATE++FVLEGELDVGFITTANK  +KT+KKGEVFVFP+GL+H+Q
Sbjct: 69  DYAP-GGLNPPHTHPRATEVIFVLEGELDVGFITTANKLFAKTVKKGEVFVFPRGLIHYQ 128

Query: 161 QNT-KDKPASVVAAFNSQLPGTVSVATALFGASPAVDDGVLAKAFQIGADEVGEIKSKIA 220
           +N  K KPASV++AFNSQLPGT S+A  LF A+PA+ D VL   FQIG  E+ +IKSK  
Sbjct: 129 KNNDKAKPASVISAFNSQLPGTQSIAATLFTATPAIPDHVLTTTFQIGTKEIEKIKSKF- 188

Query: 221 APKK 224
           APKK
Sbjct: 189 APKK 190

[Close]

BLAST of Sed0016977 vs. TAIR 10
Match: AT1G09560.1 (germin-like protein 5 )

HSP 1 Score: 257.7 bits (657), Expect = 8.7e-69
Identity = 135/223 (60.54%), Postives = 165/223 (73.99%), Query Frame = 0


Query: 1   MARSKVFVFLVMFVIAATIPDLCASDPDALQDLCVAAPSKGAKVNGFPCKEEANITAADF 60
           MA   + + L++  ++  I    ++DPD LQDLCVA    G K+NGFPCK+ A +T+ADF
Sbjct: 1   MASPTLTLLLLLTTVSFFISS--SADPDMLQDLCVADLPSGIKINGFPCKDAATVTSADF 60

Query: 61  FFAGLANPATINNSAGSAVTPANVDKIPGLNTLSISLARIDYAPDGGTNPPHTHPRATEM 120
           F  GLA P   NN+ G+ VT ANV  IPGLNTL +SL+RIDYAP GG NPPHTHPRATE+
Sbjct: 61  FSQGLAKPGLTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAP-GGLNPPHTHPRATEV 120

Query: 121 VFVLEGELDVGFITTANKHISKTIKKGEVFVFPKGLLHFQQNTKDKPASVVAAFNSQLPG 180
           VFVLEG LDVGF+TTANK IS+++KKG+VF FPKGL+HFQ+N  D PASV+AAFNSQLPG
Sbjct: 121 VFVLEGTLDVGFLTTANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPG 180

Query: 181 TVSVATALFGASPAVDDGVLAKAFQIGADEVGEIKSKIAAPKK 224
           T S+   LFG++P V D +LA+AFQ     V  IKSK   PKK
Sbjct: 181 TQSLGATLFGSTPPVPDNILAQAFQTSPGTVKHIKSKF-QPKK 219

[Close]

BLAST of Sed0016977 vs. TAIR 10
Match: AT3G05930.1 (germin-like protein 8 )

HSP 1 Score: 242.7 bits (618), Expect = 2.9e-64
Identity = 129/224 (57.59%), Postives = 161/224 (71.88%), Query Frame = 0


Query: 1   MARSKVFVFLVMFVIAATIPDLCASDPDALQDLCVAAPSKGAKVNGFPCKEEANITAADF 60
           MA S + +F+   ++AA    +  +D + LQD CVA  S G KVNG+PCK+ A +T  DF
Sbjct: 1   MATSMIPIFVTFMLVAA---HMALADTNMLQDFCVADLSNGLKVNGYPCKDPAKVTPEDF 60

Query: 61  FFAGLAN-PATINNSAGSAVTPANVDKIPGLNTLSISLARIDYAPDGGTNPPHTHPRATE 120
           +F GLA   AT N+S GSAVT ANV+K+PGLNTL +S++RIDYAP GG NPPH HPRA+E
Sbjct: 61  YFIGLATAAATANSSMGSAVTGANVEKVPGLNTLGVSISRIDYAP-GGLNPPHLHPRASE 120

Query: 121 MVFVLEGELDVGFITTANKHISKTIKKGEVFVFPKGLLHFQQNTKDKPASVVAAFNSQLP 180
            +FVLEG L VGF+TT  K ISK + KG+VFVFPK LLHFQQN    PASV+AAF+SQLP
Sbjct: 121 AIFVLEGRLFVGFLTTTGKLISKHVNKGDVFVFPKALLHFQQNPNKAPASVLAAFDSQLP 180

Query: 181 GTVSVATALFGASPAVDDGVLAKAFQIGADEVGEIKSKIAAPKK 224
           GT  V  +LFG++P + D +LAKAF   A E+ +IK K   PKK
Sbjct: 181 GTQVVGPSLFGSNPPIPDDLLAKAFGAAAPEIQKIKGKF-PPKK 219

The following BLAST results are available for this feature:

BLAST of Sed0016977 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877903.1	3.0e-95	81.61	germin-like protein subfamily 2 member 4 [Benincasa hispida] >XP_038877904.1 ger...	[more]
XP_008466192.1	3.0e-95	80.27	PREDICTED: germin-like protein subfamily 2 member 4 [Cucumis melo]	[more]
XP_022993950.1	2.8e-93	81.25	germin-like protein subfamily 2 member 2 [Cucurbita maxima]	[more]
XP_022938623.1	3.6e-93	81.25	germin-like protein subfamily 2 member 4 [Cucurbita moschata]	[more]
XP_022146354.1	4.8e-93	79.46	germin-like protein subfamily 2 member 4 [Momordica charantia]	[more]

BLAST of Sed0016977 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M263	1.8e-74	70.65	Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana OX=3702 GN=GLP1...	[more]
Q9FZ27	2.3e-74	64.41	Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana OX=3702 GN=At1g...	[more]
Q6I544	4.2e-68	62.05	Germin-like protein 5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0277500...	[more]
P94014	1.2e-67	60.54	Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana OX=3702 GN=GLP4...	[more]
Q9SPV5	4.7e-67	60.89	Nectarin-1 OS=Nicotiana plumbaginifolia OX=4092 GN=NEC1 PE=1 SV=1	[more]

BLAST of Sed0016977 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CQM8	1.4e-95	80.27	Germin-like protein OS=Cucumis melo OX=3656 GN=LOC103503679 PE=3 SV=1	[more]
A0A6J1JZY0	1.4e-93	81.25	Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489804 PE=3 SV=1	[more]
A0A6J1FJE7	1.8e-93	81.25	Germin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111444803 PE=3 SV=1	[more]
A0A6J1CXW0	2.3e-93	79.46	Germin-like protein OS=Momordica charantia OX=3673 GN=LOC111015585 PE=3 SV=1	[more]
A0A0A0KMZ7	8.2e-91	77.23	Germin-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G129280 PE=3 SV=1	[more]

BLAST of Sed0016977 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62020.1	1.3e-75	70.65	germin-like protein 10	[more]
AT1G02335.1	1.6e-75	64.41	germin-like protein subfamily 2 member 2 precursor	[more]
AT3G62020.2	1.8e-69	71.20	germin-like protein 10	[more]
AT1G09560.1	8.7e-69	60.54	germin-like protein 5	[more]
AT3G05930.1	2.9e-64	57.59	germin-like protein 8	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001929	Germin	PRINTS	PR00325	GERMIN	coord: 142..162 score: 59.36 coord: 175..190 score: 50.44 coord: 112..132 score: 64.12
IPR006045	Cupin 1	SMART	SM00835	Cupin_1_3	coord: 61..212 e-value: 2.6E-34 score: 130.0
IPR006045	Cupin 1	PFAM	PF00190	Cupin_1	coord: 64..210 e-value: 4.1E-46 score: 156.3
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 25..221 e-value: 1.1E-78 score: 265.2
None	No IPR available	PANTHER	PTHR31238	GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3	coord: 10..220
None	No IPR available	PANTHER	PTHR31238:SF18	GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 4	coord: 10..220
None	No IPR available	CDD	cd02241	cupin_OxOx	coord: 26..218 e-value: 1.72121E-89 score: 259.835
IPR019780	Germin, manganese binding site	PROSITE	PS00725	GERMIN	coord: 107..120
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 26..218

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0016977.1	Sed0016977.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010497	plasmodesmata-mediated intercellular transport
biological_process	GO:2000280	regulation of root development
cellular_component	GO:0048046	apoplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma
molecular_function	GO:0030145	manganese ion binding