Homology
BLAST of Sed0016760 vs. NCBI nr
Match:
XP_022143665.1 (DEAD-box ATP-dependent RNA helicase 39 [Momordica charantia])
HSP 1 Score: 997.7 bits (2578), Expect = 4.7e-287
Identity = 544/646 (84.21%), Postives = 578/646 (89.47%), Query Frame = 0
Query: 1 MGGTGRTLLSLSISTNLLISSRLSPPKCLPLFKIPKPITNFSRFRPLCSATAVATTSESM 60
MGGTGRTLLSLSISTNLL+ SR+SPPKC PL KIPKP+ FS FRPLCSATA T +ESM
Sbjct: 1 MGGTGRTLLSLSISTNLLLMSRVSPPKCFPLLKIPKPVRIFSGFRPLCSATADTTPTESM 60
Query: 61 ETTQATEPLKHSPLLDRLRARHLKESASTTKLTRNRALQSV----DEAKKVDKQRKK-LV 120
ETTQ EPLKHS LL+RLRARHLKESAS TK R+ SV DE K +K++KK LV
Sbjct: 61 ETTQVIEPLKHSLLLERLRARHLKESASKTKQARSTLSPSVGGAEDEMNKAEKKKKKNLV 120
Query: 121 ESFEELGLTEEVMGAVREMGIEVPTEIQCIGIPAVLDGTSVILGSHTGSGKTLAYLLPLV 180
ESFEELGL EEVMGAVREMGIEVPTEIQCIGIPAVL+G SVILGSHTGSGKTLAYLLPLV
Sbjct: 121 ESFEELGLNEEVMGAVREMGIEVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLV 180
Query: 181 QLLRRDEEMFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRIRP 240
QLLRRDEE+FGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGR+RP
Sbjct: 181 QLLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRP 240
Query: 241 QEDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFISPL 300
QEDSLSNPI+MVVGTPGRVLQHIEAGN+VYGDIKYLVLDEADTMFDHGFGPDIRKFISPL
Sbjct: 241 QEDSLSNPIEMVVGTPGRVLQHIEAGNIVYGDIKYLVLDEADTMFDHGFGPDIRKFISPL 300
Query: 301 NHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSSLHKKIASARHDFIKLSG 360
HRASSH+DQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTS+LHKKIASARHDFIKLSG
Sbjct: 301 KHRASSHEDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSG 360
Query: 361 GENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLSENQISTVNYHGEVPAQKRVE 420
ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFL ENQISTVNYHGEVPAQKRVE
Sbjct: 361 SENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVE 420
Query: 421 NLKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKV 480
NLKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKV
Sbjct: 421 NLKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKV 480
Query: 481 TSLVAKKDDVLATRIEEAIRKNESLESLTTDNVRRDNARDNITRQKTKNEKLVKVSSERR 540
TSLVAKKD +LATRIEEAIRKNESLESLT DNVRRD ARD IT QKTK KLV+VSSE+
Sbjct: 481 TSLVAKKDAILATRIEEAIRKNESLESLTADNVRRDIARDRITEQKTKTAKLVRVSSEKS 540
Query: 541 RMQSQSSVVATTRSSSTTKSSSVHSKSPSGKPSSPAKTRKPAVRVSKPVKTLKTIPQKPS 600
+ +S S +++TTKSSS+ S+ SGK SPAK++K AVRVSK V + + P+KPS
Sbjct: 541 KAKSSS-------AAATTKSSSIRSQGSSGKAPSPAKSQKSAVRVSKSVDSSRNNPRKPS 600
Query: 601 SELKKPM-TNRRRPGSAIKSPGQKLNVVGFRGRSSSSQSDKRQSVS 641
S KKPM ++RRRPG AIKS G KLNVVGFRGR S+QSDKRQSVS
Sbjct: 601 SGSKKPMASSRRRPGIAIKSTGPKLNVVGFRGR--SNQSDKRQSVS 637
BLAST of Sed0016760 vs. NCBI nr
Match:
TYK14098.1 (DEAD-box ATP-dependent RNA helicase 39 [Cucumis melo var. makuwa])
HSP 1 Score: 994.6 bits (2570), Expect = 4.0e-286
Identity = 538/645 (83.41%), Postives = 566/645 (87.75%), Query Frame = 0
Query: 1 MGGTGRTLLSLSISTNLLISSRLSPPKCLPLFKIPKPITNFSRFRPLCSATAVATTSESM 60
MGGTGRTLLSLSISTNLLISSRLSPPKCLPL KIPKP NFS FRPL SAT T++ES
Sbjct: 1 MGGTGRTLLSLSISTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPLSSATTATTSTEST 60
Query: 61 ETTQATEPLKHSPLLDRLRARHLKESASTTKLTRNRALQSV----DEAKKVDKQRKKLVE 120
E Q EPLKHS LL+RLR RHLKESA TK TRN QSV DE KK +K+ KKLVE
Sbjct: 61 EAIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKNKKLVE 120
Query: 121 SFEELGLTEEVMGAVREMGIEVPTEIQCIGIPAVLDGTSVILGSHTGSGKTLAYLLPLVQ 180
SFEELGL EEVMGAVREMGI+VPTEIQCIGIPAVL+G SVILGSHTGSGKTLAYLLPLVQ
Sbjct: 121 SFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180
Query: 181 LLRRDEEMFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRIRPQ 240
LLRRDEE+FGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGR+RPQ
Sbjct: 181 LLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240
Query: 241 EDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFISPLN 300
EDSLSNPIDMVVGTPGRVLQHI+AGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFI PL
Sbjct: 241 EDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300
Query: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSSLHKKIASARHDFIKLSGG 360
HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTS+LHKKIASARHDFIKLSG
Sbjct: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360
Query: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLSENQISTVNYHGEVPAQKRVEN 420
ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFL ENQISTVNYHGEVPAQKRVEN
Sbjct: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420
Query: 421 LKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVT 480
LKKFKSDD DCPTLVCTDLAARGLDLDVDHVIMFDFP NSIDYLHRTGRTARMGAKGKVT
Sbjct: 421 LKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480
Query: 481 SLVAKKDDVLATRIEEAIRKNESLESLTTDNVRRDNARDNITRQKTKNEKLVKVSSERRR 540
SLV KKDD+LATRIEEAI+KNESLESLT D+VRRD ARD IT KTKN KL+K S+ R
Sbjct: 481 SLVGKKDDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTGSR- 540
Query: 541 MQSQSSVVATTRSSSTTKSSSVHSKSPSGKPSSPAKTRKPAVRVSKPVKTLKTIPQKPSS 600
++S KSSSVHSK +GK S +T+KP V VSK VK+ + IP+KPSS
Sbjct: 541 ---------AKSATSAPKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSS 600
Query: 601 ELKKPMTNRRRPGSAIKSPGQKLNVVGFRGRSSSSQSDKRQSVSR 642
E KK + +RRRPGSAIKS GQKLNVVGFRGR S+Q DKR+SVSR
Sbjct: 601 ETKKQVASRRRPGSAIKSSGQKLNVVGFRGR--SNQFDKRRSVSR 633
BLAST of Sed0016760 vs. NCBI nr
Match:
XP_008461901.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 39 [Cucumis melo])
HSP 1 Score: 993.0 bits (2566), Expect = 1.2e-285
Identity = 537/644 (83.39%), Postives = 565/644 (87.73%), Query Frame = 0
Query: 1 MGGTGRTLLSLSISTNLLISSRLSPPKCLPLFKIPKPITNFSRFRPLCSATAVATTSESM 60
MGGTGRTLLSLSISTNLLISSRLSPPKCLPL KIPKP NFS FRPL SAT T++ES
Sbjct: 1 MGGTGRTLLSLSISTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPLSSATTATTSTEST 60
Query: 61 ETTQATEPLKHSPLLDRLRARHLKESASTTKLTRNRALQSV----DEAKKVDKQRKKLVE 120
E Q EPLKHS LL+RLR RHLKESA TK TRN QSV DE KK +K+ KKLVE
Sbjct: 61 EAIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKNKKLVE 120
Query: 121 SFEELGLTEEVMGAVREMGIEVPTEIQCIGIPAVLDGTSVILGSHTGSGKTLAYLLPLVQ 180
SFEELGL EEVMGAVREMGI+VPTEIQCIGIPAVL+G SVILGSHTGSGKTLAYLLPLVQ
Sbjct: 121 SFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180
Query: 181 LLRRDEEMFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRIRPQ 240
LLRRDEE+FGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGR+RPQ
Sbjct: 181 LLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240
Query: 241 EDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFISPLN 300
EDSLSNPIDMVVGTPGRVLQHI+AGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFI PL
Sbjct: 241 EDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300
Query: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSSLHKKIASARHDFIKLSGG 360
HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTS+LHKKIASARHDFIKLSG
Sbjct: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360
Query: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLSENQISTVNYHGEVPAQKRVEN 420
ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFL ENQISTVNYHGEVPAQKRVEN
Sbjct: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420
Query: 421 LKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVT 480
LKKFKSDD DCPTLVCTDLAARGLDLDVDHVIMFDFP NSIDYLHRTGRTARMGAKGKVT
Sbjct: 421 LKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480
Query: 481 SLVAKKDDVLATRIEEAIRKNESLESLTTDNVRRDNARDNITRQKTKNEKLVKVSSERRR 540
SLV KKDD+LATRIEEAI+KNESLESLT D+VRRD ARD IT KTKN KL+K S+ R
Sbjct: 481 SLVGKKDDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTGSR- 540
Query: 541 MQSQSSVVATTRSSSTTKSSSVHSKSPSGKPSSPAKTRKPAVRVSKPVKTLKTIPQKPSS 600
++S KSSSVHSK +GK S +T+KP V VSK VK+ + IP+KPSS
Sbjct: 541 ---------AKSATSAPKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSS 600
Query: 601 ELKKPMTNRRRPGSAIKSPGQKLNVVGFRGRSSSSQSDKRQSVS 641
E KK + +RRRPGSAIKS GQKLNVVGFRGR S+Q DKR+SVS
Sbjct: 601 ETKKQVASRRRPGSAIKSSGQKLNVVGFRGR--SNQFDKRRSVS 632
BLAST of Sed0016760 vs. NCBI nr
Match:
XP_004139692.1 (DEAD-box ATP-dependent RNA helicase 39 [Cucumis sativus] >XP_011659101.1 DEAD-box ATP-dependent RNA helicase 39 [Cucumis sativus] >KAE8646174.1 hypothetical protein Csa_016020 [Cucumis sativus])
HSP 1 Score: 991.1 bits (2561), Expect = 4.4e-285
Identity = 535/644 (83.07%), Postives = 568/644 (88.20%), Query Frame = 0
Query: 1 MGGTGRTLLSLSISTNLLISSRLSPPKCLPLFKIPKPITNFSRFRPLCSATAVATTSESM 60
MGGTGRTLLSLS+STNLLISSRLSPPKCLPL KIPKP NFS FRP+ SATA T++ES
Sbjct: 1 MGGTGRTLLSLSVSTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPISSATAATTSTEST 60
Query: 61 ETTQATEPLKHSPLLDRLRARHLKESASTTKLTRNRALQSV----DEAKKVDKQRKKLVE 120
ET Q EPLKHS LL+RLR RHLKESA TK TRN QSV DE KK +K++KKL E
Sbjct: 61 ETIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKKKKLDE 120
Query: 121 SFEELGLTEEVMGAVREMGIEVPTEIQCIGIPAVLDGTSVILGSHTGSGKTLAYLLPLVQ 180
SFEELGL EEVMGAVREMGI+VP+EIQCIGIPAVL+G SVILGSHTGSGKTLAYLLPLVQ
Sbjct: 121 SFEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180
Query: 181 LLRRDEEMFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRIRPQ 240
LLRRDEE+FG+LMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGR+RPQ
Sbjct: 181 LLRRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240
Query: 241 EDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFISPLN 300
EDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFI PL
Sbjct: 241 EDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300
Query: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSSLHKKIASARHDFIKLSGG 360
HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTS+LHKKIASARHDFIKLSG
Sbjct: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360
Query: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLSENQISTVNYHGEVPAQKRVEN 420
ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFL ENQISTVNYHGEVPAQKRVEN
Sbjct: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420
Query: 421 LKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVT 480
LKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFP NSIDYLHRTGRTARMGAKGKVT
Sbjct: 421 LKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480
Query: 481 SLVAKKDDVLATRIEEAIRKNESLESLTTDNVRRDNARDNITRQKTKNEKLVKVSSERRR 540
SLV KKD++LATRIEEAIRKNESLESLT D+V RD AR+ IT KTKN KL+K S+ R
Sbjct: 481 SLVGKKDNILATRIEEAIRKNESLESLTADSVWRDVARNRITEHKTKNAKLIKASTGRSG 540
Query: 541 MQSQSSVVATTRSSSTTKSSSVHSKSPSGKPSSPAKTRKPAVRVSKPVKTLKTIPQKPSS 600
+S ++S KSSSVHSK GK S +TRKP V VSKPVK+ + IP+KPSS
Sbjct: 541 AKS---------ATSAPKSSSVHSKGEPGKASYSERTRKPGVSVSKPVKSSRNIPRKPSS 600
Query: 601 ELKKPMTNRRRPGSAIKSPGQKLNVVGFRGRSSSSQSDKRQSVS 641
E KK + +R+RPGSAIKS GQKLNVVGFRGR S+QS R+SVS
Sbjct: 601 ETKKQVASRKRPGSAIKSSGQKLNVVGFRGR--SNQSGNRRSVS 633
BLAST of Sed0016760 vs. NCBI nr
Match:
XP_038898304.1 (DEAD-box ATP-dependent RNA helicase 39 [Benincasa hispida])
HSP 1 Score: 989.2 bits (2556), Expect = 1.7e-284
Identity = 539/640 (84.22%), Postives = 565/640 (88.28%), Query Frame = 0
Query: 1 MGGTGRTLLSLSISTNLLISSRLSPPKCLPLFKIPKPITNFSRFRPLCSATAVATTSESM 60
MGGTGR LLSLSISTNLLISSRLSPPKCL L +IPKP NFS FRPLCSAT T++ES+
Sbjct: 1 MGGTGRALLSLSISTNLLISSRLSPPKCLSLLEIPKPFRNFSGFRPLCSATTATTSTESV 60
Query: 61 ETTQATEPLKHSPLLDRLRARHLKESASTTKLTRNRALQSVDEAKKVDKQRKKLVESFEE 120
ET Q EPLKHS LL+RLR RHLKESAS K ++ DE KK +K++KKLVE FEE
Sbjct: 61 ETAQVIEPLKHSQLLERLRTRHLKESAS--KTMPKSVGRAEDEMKKSEKKKKKLVERFEE 120
Query: 121 LGLTEEVMGAVREMGIEVPTEIQCIGIPAVLDGTSVILGSHTGSGKTLAYLLPLVQLLRR 180
LGL EEVMGAVREMGIEVPTEIQCIGIPAVL+ SVILGSHTGSGKTLAYLLPLVQLLRR
Sbjct: 121 LGLNEEVMGAVREMGIEVPTEIQCIGIPAVLEEKSVILGSHTGSGKTLAYLLPLVQLLRR 180
Query: 181 DEEMFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRIRPQEDSL 240
DEE+FGKLM+PRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGR+RPQEDSL
Sbjct: 181 DEELFGKLMRPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQEDSL 240
Query: 241 SNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFISPLNHRAS 300
SNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFI PL HRAS
Sbjct: 241 SNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLKHRAS 300
Query: 301 SHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSSLHKKIASARHDFIKLSGGENKL 360
SHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSSLHKKIASARHDFIKLSG ENKL
Sbjct: 301 SHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSSLHKKIASARHDFIKLSGSENKL 360
Query: 361 EALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLSENQISTVNYHGEVPAQKRVENLKKF 420
EALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFL ENQISTVNYHGEVPAQKRVENLKKF
Sbjct: 361 EALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKF 420
Query: 421 KSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVA 480
KSDD DCPTLVCTDLAARGLDLDVDHVIMFDFP NSIDYLHRTGRTARMGAKGKVTSLVA
Sbjct: 421 KSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVA 480
Query: 481 KKDDVLATRIEEAIRKNESLESLTTDNVRRDNARDNITRQKTKNEKLVKVSSERRRMQSQ 540
KKDD+LATRIEEAIRKNESLESLT DNVRRD ARD I QKTKN KLVK SSER R +S
Sbjct: 481 KKDDILATRIEEAIRKNESLESLTADNVRRDIARDRIMEQKTKNAKLVKASSERSRAKS- 540
Query: 541 SSVVATTRSSSTTKSSSVHSKSPSGKPSSPAKTRKPAVRVSKPVKTLKTIPQKPSSELKK 600
S+S KSSSVHSK SGK SS +T+KP V VSK K+ + I +KPSSE KK
Sbjct: 541 --------STSALKSSSVHSKGESGKASSTPRTQKPGVPVSKS-KSSRNIQRKPSSESKK 600
Query: 601 PMTNRRRPGSAIKSPGQKLNVVGFRGRSSSSQSDKRQSVS 641
+ +RRRPGSAIKS QKLNVVGFRGR S+QSDKR+SVS
Sbjct: 601 HVASRRRPGSAIKSTSQKLNVVGFRGR--SNQSDKRRSVS 626
BLAST of Sed0016760 vs. ExPASy Swiss-Prot
Match:
Q56X76 (DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana OX=3702 GN=RH39 PE=2 SV=2)
HSP 1 Score: 759.6 bits (1960), Expect = 2.8e-218
Identity = 422/636 (66.35%), Postives = 507/636 (79.72%), Query Frame = 0
Query: 1 MGGTGRTLLSLSISTNLLISSRLSPPKCLPLFKIPKPITNFSRFRPLCSATAVATTSESM 60
M G RT+LSLS+S++L S++ P P ++ KP + + FRPL S A ATTS
Sbjct: 1 MVGASRTILSLSLSSSLFTFSKI--PHVFPFLRLHKPRFHHA-FRPLYS--AAATTSSPT 60
Query: 61 ETTQATEP--LKHSPLLDRLRARHLKESASTTKLTRNRALQSVDEAKKVDKQRKKLVESF 120
T T+P LKH+ LL+RLR RHLKESA + R ++ V+E + K+ KKLVE+F
Sbjct: 61 TETNVTDPDQLKHTILLERLRLRHLKESAKPPQ-QRPSSVVGVEEESSIRKKSKKLVENF 120
Query: 121 EELGLTEEVMGAVREMGIEVPTEIQCIGIPAVLDGTSVILGSHTGSGKTLAYLLPLVQLL 180
+ELGL+EEVMGA++E+ IEVPTEIQCIGIPAV++ SV+LGSHTGSGKTLAYLLP+VQL+
Sbjct: 121 QELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPIVQLM 180
Query: 181 RRDEEMFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRIRPQED 240
R DE GK KPRRPR VVLCPTRELSEQV+RV+KSISHHARFRS +VSGG RIRPQED
Sbjct: 181 REDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISHHARFRSILVSGGSRIRPQED 240
Query: 241 SLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFISPLNHR 300
SL+N IDMVVGTPGR+LQHIE GNMVYGDI YLVLDEADTMFD GFGP+IRKF++PLN R
Sbjct: 241 SLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRKFLAPLNQR 300
Query: 301 ASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSSLHKKIASARHDFIKLSGGEN 360
A +DQGFQT+LVTATMT AVQKL+DEEFQGI HLRTS+LHKKIA+ARHDFIKLSGGE+
Sbjct: 301 ALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHLRTSTLHKKIANARHDFIKLSGGED 360
Query: 361 KLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLSENQISTVNYHGEVPAQKRVENLK 420
KLEALLQVLEPSLAKG++VMVFCNTLNSSRAVDH+LSENQISTVNYHGEVPA++RVENLK
Sbjct: 361 KLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAEQRVENLK 420
Query: 421 KFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSL 480
KFK ++ DCPTLVCTDLAARGLDLDVDHV+MFDFP NSIDYLHRTGRTARMGAKGKVTSL
Sbjct: 421 KFKDEEGDCPTLVCTDLAARGLDLDVDHVVMFDFPKNSIDYLHRTGRTARMGAKGKVTSL 480
Query: 481 VAKKDDVLATRIEEAIRKNESLESLTTDNVRRDNARDNITRQKTKNEKLVKVSSERRRMQ 540
V++KD +LA RIEEA+R NESLESLTTDNVRRD AR +IT++K ++ K ++ S++R +
Sbjct: 481 VSRKDQMLAARIEEAMRNNESLESLTTDNVRRDAARTHITQEKGRSVKQIREVSKQRNSR 540
Query: 541 SQSSVVATTRSSSTTKSSSVHSKSPSGKPSSPAKTRKPAVRVSKPV-KTLKTIPQKPSSE 600
+ S +++ + +T + KS S S P K P + SKP K LKT+ + +
Sbjct: 541 DKPS--SSSPPARSTGGKTPVRKSSSSSFSKPRKASSPPEKSSKPKRKILKTVGSRSIAA 600
Query: 601 LKKPMTNRRRPGSAIKSPGQKLNVVGFRGRSSSSQS 634
K ++RR PG+KL+VVGFRG+SSS+++
Sbjct: 601 RGKTGSDRR--------PGKKLSVVGFRGKSSSARA 620
BLAST of Sed0016760 vs. ExPASy Swiss-Prot
Match:
Q5VRY0 (DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0184500 PE=2 SV=1)
HSP 1 Score: 713.8 bits (1841), Expect = 1.8e-204
Identity = 401/626 (64.06%), Postives = 467/626 (74.60%), Query Frame = 0
Query: 27 KCLPLFKIPKPITNFSRFRPLCSATAVATTSESM---------ETTQATEPLKHSPLLDR 86
+CL L + P P+ R + T TT+ ETT P +H LL+R
Sbjct: 9 RCLMLTR-PSPLLRLRLLRAALATTTTTTTAAGASAVTAPTEPETTAREAPSRHELLLER 68
Query: 87 LRARHLKESASTT----KLTRNRALQSVDEAKKVDKQRKKLVESFEELGLTEEVMGAVRE 146
LR RHLK + T + + R + K+R ++V+SFEELGL EEVM A+ E
Sbjct: 69 LRQRHLKGVPAATPRPAQREKGRGGGGGGAQELQQKRRVEVVDSFEELGLGEEVMAALGE 128
Query: 147 MGIEVPTEIQCIGIPAVLDGTSVILGSHTGSGKTLAYLLPLVQLLRRDEEMFGKLMKPRR 206
MGI PTEIQC+G+PAVL GTSV+LGSHTGSGKTLAYLLPLVQLLRRDE M G MKPRR
Sbjct: 129 MGISKPTEIQCVGVPAVLAGTSVVLGSHTGSGKTLAYLLPLVQLLRRDEAMLGMSMKPRR 188
Query: 207 PRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRIRPQEDSLSNPIDMVVGTPGR 266
PRAVVLCPTREL+EQVFRV+KSISHHARFRSTMVSGG RIRPQEDSL+ P+DMVVGTPGR
Sbjct: 189 PRAVVLCPTRELTEQVFRVAKSISHHARFRSTMVSGGSRIRPQEDSLNMPVDMVVGTPGR 248
Query: 267 VLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFISPLNHRASSHDDQGFQTILVT 326
+L HI+ GNMVYGDIKYLVLDEADTMFD GFGPDIRKF++PL +RA+ DQGFQT+LVT
Sbjct: 249 ILDHIKDGNMVYGDIKYLVLDEADTMFDQGFGPDIRKFLAPLKNRAAKPGDQGFQTVLVT 308
Query: 327 ATMTKAVQKLIDEEFQGIVHLRTSSLHKKIASARHDFIKLSGGENKLEALLQVLEPSLAK 386
ATMTKAVQKLIDEEF+GIVHLRT++ K++A+ARHDFIKLSG ENKLEALLQVLEPSLAK
Sbjct: 309 ATMTKAVQKLIDEEFEGIVHLRTTTFQKRVATARHDFIKLSGSENKLEALLQVLEPSLAK 368
Query: 387 GNRVMVFCNTLNSSRAVDHFLSENQISTVNYHGEVPAQKRVENLKKFKSDDADCPTLVCT 446
GN+VMVFCNTLNSSRAVDHFL+ENQISTVNYHGEVPA++RVENL KF++++ DCPTLVCT
Sbjct: 369 GNKVMVFCNTLNSSRAVDHFLTENQISTVNYHGEVPAEERVENLNKFRNEEGDCPTLVCT 428
Query: 447 DLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDDVLATRIEEA 506
DLAARGLDLDVDHVIMFDFP NSIDYLHRTGRTARMGAKGKVTSLVAKKD LATRIEEA
Sbjct: 429 DLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVAKKDVTLATRIEEA 488
Query: 507 IRKNESLESLTTDNVRRDNARDNITRQKTKNEKLVKVSSERRR---MQSQSSVVATTRSS 566
++KNESLE+LTT+NVRR T K + L V+ + RR +Q++SS + +S
Sbjct: 489 MKKNESLEALTTNNVRRAAVNPQYTSTKGRPSALKVVNQKGRRGVALQTKSSRIVKDTTS 548
Query: 567 STTKS---SSVHSKSPSGKPSSPAKTRKPAVRVSKPVKTLKTIPQKPSSELKKPMTNRRR 626
S +S S SKS S + P ++ KP+ S K K+ P+ R
Sbjct: 549 SRRRSPIRSQPRSKSTSSGKAKPVRSAKPSKSSSPSPKVAKSRPRPEG-----------R 608
Query: 627 PGSAIKSPGQKLNVVGFRGRSSSSQS 634
G A+ G KL+VVGFRGRSS +
Sbjct: 609 KGDALNKLGSKLSVVGFRGRSSGKSA 622
BLAST of Sed0016760 vs. ExPASy Swiss-Prot
Match:
Q0DVX2 (DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0108600 PE=2 SV=2)
HSP 1 Score: 210.3 bits (534), Expect = 6.4e-53
Identity = 137/410 (33.41%), Postives = 217/410 (52.93%), Query Frame = 0
Query: 117 SFEELGLTEEVMGAVREMGIEVPTEIQCIGIPAVLDGTSVILGSHTGSGKTLAYLLPLVQ 176
SF+E+G ++E++GA+R G P+ IQ + VL+G S I+G +GSGKTLAYL P+VQ
Sbjct: 241 SFKEIGCSDEILGALRSFGFPRPSHIQAMAYRPVLEGKSCIIGDQSGSGKTLAYLCPVVQ 300
Query: 177 LLRRDEEMFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHH-ARFRSTMVSGGGRIRP 236
LR++E PR PR VVL PT EL+ QV +SIS FRS + +GG R +
Sbjct: 301 NLRKEEVEGLHRSSPRNPRVVVLTPTAELASQVLNNCRSISKSGVPFRSMVATGGFRQKT 360
Query: 237 QEDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMF-DHGFGPDIRKFI-- 296
Q +SL +D+++ TPGR L ++ G + +++ +VLDE D ++ + F + + I
Sbjct: 361 QLESLDQELDVLIATPGRFLYLLQEGFVQLNNLRCVVLDEVDILYGEESFEQVLHQLITV 420
Query: 297 SPLNHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSSLHKKIASARHDFIK 356
+PL Q + VTAT+ + + E F + +H+ + +
Sbjct: 421 APLT----------TQYLFVTATLPLDIYNKVVETFPDCELIMGPGVHRTSSRLEEILVD 480
Query: 357 LSGGE-----------NKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFL-----SE 416
SG + NK AL++++E S + + ++FCN + + R V++ L
Sbjct: 481 CSGDDNEEKNPETAFSNKKSALVKIIEESPVR--KTIIFCNKIETCRKVENALRRVDRKA 540
Query: 417 NQISTVNYHGEVPAQKRVENLKKF-KSDDADCPTLVCTDLAARGLDL-DVDHVIMFDFPL 476
+QI + +H + Q+R+ N+K+F AD LVCTD A+RG+D +V+HV++FD+P
Sbjct: 541 SQIKVLPFHAALDQQQRIANIKEFLNKQTADSMFLVCTDRASRGIDFANVNHVVLFDYPR 600
Query: 477 NSIDYLHRTGRTAR-MGAKGKVTSLVAKKDDVLATRIEEAIRKNESLESL 504
+ +Y+ R GRTAR GK K LA R+ E K L +
Sbjct: 601 DPSEYVRRVGRTARGASGNGKAFVFAVGKQVSLARRVMERNIKGHPLHDV 638
BLAST of Sed0016760 vs. ExPASy Swiss-Prot
Match:
Q2U070 (ATP-dependent RNA helicase dbp2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=dbp2 PE=3 SV=1)
HSP 1 Score: 201.8 bits (512), Expect = 2.3e-50
Identity = 133/388 (34.28%), Postives = 204/388 (52.58%), Query Frame = 0
Query: 95 NRALQSVDEAKK---VDKQRKKL---VESFEELGLTEEVMGAVREMGIEVPTEIQCIGIP 154
NR+ + VDE +K + Q K + VE+F+E G + V+ V+ G E PT IQ G P
Sbjct: 103 NRSQRDVDEFRKKFEMSVQGKNIPRPVETFDEAGFPQYVLSEVKAQGFERPTAIQSQGWP 162
Query: 155 AVLDGTSVILGSHTGSGKTLAYLLPLVQLLRRDEEMFGKLMKP-RRPRAVVLCPTRELSE 214
L G V+ + TGSGKTL+Y LP + + L+ P P +VL PTREL+
Sbjct: 163 MALSGRDVVGIAETGSGKTLSYCLPAIVHINAQ-----PLLAPGDGPIVLVLAPTRELAV 222
Query: 215 QVFRVSKSISHHARFRSTMVSGGGRIRPQEDSLSNPIDMVVGTPGRVLQHIEAGNMVYGD 274
Q+ +R R+T V GG PQ LS +++ + TPGR++ +EAG
Sbjct: 223 QIQAEITKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRR 282
Query: 275 IKYLVLDEADTMFDHGFGPDIRKFISPLNHRASSHDDQGFQTILVTATMTKAVQKLIDEE 334
+ YLVLDEAD M D GF P IRK IS + QT + +AT K V++L +
Sbjct: 283 VTYLVLDEADRMLDMGFEPQIRKIISQIR--------PDRQTCMWSATWPKEVRQLASDF 342
Query: 335 FQGIVHLRTSSLHKKIASARHDFIKLSGGENKLEALLQVLEPSLA-KGNRVMVFCNTLNS 394
+ + S+ +++ K + +++ LE + +GN+ ++F T
Sbjct: 343 LNDYIQVNIGSMDLSANHRITQIVEVVSDFEKRDKMIKHLEKIMENRGNKCLIFTGTKRI 402
Query: 395 SRAVDHFLSENQISTVNYHGEVPAQKRVENLKKFKSDDADCPTLVCTDLAARGLDL-DVD 454
+ + FL ++ ++ HG+ Q+R L +FK+ + P +V TD+A+RG+D+ D+
Sbjct: 403 ADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKS--PIMVATDVASRGIDVRDIT 462
Query: 455 HVIMFDFPLNSIDYLHRTGRTARMGAKG 474
HV+ +D+P NS DY+HR GRT R GAKG
Sbjct: 463 HVLNYDYPNNSEDYVHRIGRTGRAGAKG 475
BLAST of Sed0016760 vs. ExPASy Swiss-Prot
Match:
Q5B0J9 (ATP-dependent RNA helicase dbp2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=dbp2 PE=3 SV=1)
HSP 1 Score: 199.5 bits (506), Expect = 1.1e-49
Identity = 138/411 (33.58%), Postives = 211/411 (51.34%), Query Frame = 0
Query: 96 RALQSVDEAKK------VDKQRKKLVESFEELGLTEEVMGAVREMGIEVPTEIQCIGIPA 155
R+ + VDE +K + + VE+F+E G + V+ V+ G E PT IQ G P
Sbjct: 114 RSQREVDEFRKKCEMTVQGRDVPRPVETFDEAGFPQYVLSEVKAQGFEKPTAIQSQGWPM 173
Query: 156 VLDGTSVILGSHTGSGKTLAYLLPLVQLLRRDEEMFGKLMKP-RRPRAVVLCPTRELSEQ 215
L G V+ + TGSGKTL+Y LP + + L+ P P ++L PTREL+ Q
Sbjct: 174 ALSGRDVVGIAETGSGKTLSYCLPAIVHINAQ-----PLLAPGDGPIVLILAPTRELAVQ 233
Query: 216 VFRVSKSISHHARFRSTMVSGGGRIRPQEDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDI 275
+ +R R+T V GG PQ LS +++ + TPGR++ +EAG +
Sbjct: 234 IQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRV 293
Query: 276 KYLVLDEADTMFDHGFGPDIRKFISPLNHRASSHDDQGFQTILVTATMTKAVQKLIDEEF 335
YLVLDEAD M D GF P IRK IS + QT + +AT K V++L +
Sbjct: 294 TYLVLDEADRMLDMGFEPQIRKIISQIR--------PDRQTCMWSATWPKEVRQLASDFL 353
Query: 336 QGIVHLRTSSLHKKIASARHDFIKLSGGENKLEALLQVLEPSLA-KGNRVMVFCNTLNSS 395
+ + S+ +++ K + +++ LE + +GN+ +VF T +
Sbjct: 354 NNYIQVNIGSMDLSANHRITQIVEVISEFEKRDRMIKHLEKIMENRGNKCLVFTGTKRIA 413
Query: 396 RAVDHFLSENQISTVNYHGEVPAQKRVENLKKFKSDDADCPTLVCTDLAARGLDL-DVDH 455
+ FL ++ ++ HG+ Q+R L +FK+ + P +V TD+A+RG+D+ D+ H
Sbjct: 414 DEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKS--PIMVATDVASRGIDVRDITH 473
Query: 456 VIMFDFPLNSIDYLHRTGRTARMGAKGKV----TSLVAKKDDVLATRIEEA 494
VI +D+P NS DY+HR GRT R GAKG T+ AK+ L T + EA
Sbjct: 474 VINYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDNAKQARDLVTILSEA 509
BLAST of Sed0016760 vs. ExPASy TrEMBL
Match:
A0A6J1CPE5 (DEAD-box ATP-dependent RNA helicase 39 OS=Momordica charantia OX=3673 GN=LOC111013516 PE=4 SV=1)
HSP 1 Score: 997.7 bits (2578), Expect = 2.3e-287
Identity = 544/646 (84.21%), Postives = 578/646 (89.47%), Query Frame = 0
Query: 1 MGGTGRTLLSLSISTNLLISSRLSPPKCLPLFKIPKPITNFSRFRPLCSATAVATTSESM 60
MGGTGRTLLSLSISTNLL+ SR+SPPKC PL KIPKP+ FS FRPLCSATA T +ESM
Sbjct: 1 MGGTGRTLLSLSISTNLLLMSRVSPPKCFPLLKIPKPVRIFSGFRPLCSATADTTPTESM 60
Query: 61 ETTQATEPLKHSPLLDRLRARHLKESASTTKLTRNRALQSV----DEAKKVDKQRKK-LV 120
ETTQ EPLKHS LL+RLRARHLKESAS TK R+ SV DE K +K++KK LV
Sbjct: 61 ETTQVIEPLKHSLLLERLRARHLKESASKTKQARSTLSPSVGGAEDEMNKAEKKKKKNLV 120
Query: 121 ESFEELGLTEEVMGAVREMGIEVPTEIQCIGIPAVLDGTSVILGSHTGSGKTLAYLLPLV 180
ESFEELGL EEVMGAVREMGIEVPTEIQCIGIPAVL+G SVILGSHTGSGKTLAYLLPLV
Sbjct: 121 ESFEELGLNEEVMGAVREMGIEVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLV 180
Query: 181 QLLRRDEEMFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRIRP 240
QLLRRDEE+FGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGR+RP
Sbjct: 181 QLLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRP 240
Query: 241 QEDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFISPL 300
QEDSLSNPI+MVVGTPGRVLQHIEAGN+VYGDIKYLVLDEADTMFDHGFGPDIRKFISPL
Sbjct: 241 QEDSLSNPIEMVVGTPGRVLQHIEAGNIVYGDIKYLVLDEADTMFDHGFGPDIRKFISPL 300
Query: 301 NHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSSLHKKIASARHDFIKLSG 360
HRASSH+DQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTS+LHKKIASARHDFIKLSG
Sbjct: 301 KHRASSHEDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSG 360
Query: 361 GENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLSENQISTVNYHGEVPAQKRVE 420
ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFL ENQISTVNYHGEVPAQKRVE
Sbjct: 361 SENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVE 420
Query: 421 NLKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKV 480
NLKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKV
Sbjct: 421 NLKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKV 480
Query: 481 TSLVAKKDDVLATRIEEAIRKNESLESLTTDNVRRDNARDNITRQKTKNEKLVKVSSERR 540
TSLVAKKD +LATRIEEAIRKNESLESLT DNVRRD ARD IT QKTK KLV+VSSE+
Sbjct: 481 TSLVAKKDAILATRIEEAIRKNESLESLTADNVRRDIARDRITEQKTKTAKLVRVSSEKS 540
Query: 541 RMQSQSSVVATTRSSSTTKSSSVHSKSPSGKPSSPAKTRKPAVRVSKPVKTLKTIPQKPS 600
+ +S S +++TTKSSS+ S+ SGK SPAK++K AVRVSK V + + P+KPS
Sbjct: 541 KAKSSS-------AAATTKSSSIRSQGSSGKAPSPAKSQKSAVRVSKSVDSSRNNPRKPS 600
Query: 601 SELKKPM-TNRRRPGSAIKSPGQKLNVVGFRGRSSSSQSDKRQSVS 641
S KKPM ++RRRPG AIKS G KLNVVGFRGR S+QSDKRQSVS
Sbjct: 601 SGSKKPMASSRRRPGIAIKSTGPKLNVVGFRGR--SNQSDKRQSVS 637
BLAST of Sed0016760 vs. ExPASy TrEMBL
Match:
A0A5D3CSB8 (DEAD-box ATP-dependent RNA helicase 39 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G00130 PE=4 SV=1)
HSP 1 Score: 994.6 bits (2570), Expect = 1.9e-286
Identity = 538/645 (83.41%), Postives = 566/645 (87.75%), Query Frame = 0
Query: 1 MGGTGRTLLSLSISTNLLISSRLSPPKCLPLFKIPKPITNFSRFRPLCSATAVATTSESM 60
MGGTGRTLLSLSISTNLLISSRLSPPKCLPL KIPKP NFS FRPL SAT T++ES
Sbjct: 1 MGGTGRTLLSLSISTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPLSSATTATTSTEST 60
Query: 61 ETTQATEPLKHSPLLDRLRARHLKESASTTKLTRNRALQSV----DEAKKVDKQRKKLVE 120
E Q EPLKHS LL+RLR RHLKESA TK TRN QSV DE KK +K+ KKLVE
Sbjct: 61 EAIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKNKKLVE 120
Query: 121 SFEELGLTEEVMGAVREMGIEVPTEIQCIGIPAVLDGTSVILGSHTGSGKTLAYLLPLVQ 180
SFEELGL EEVMGAVREMGI+VPTEIQCIGIPAVL+G SVILGSHTGSGKTLAYLLPLVQ
Sbjct: 121 SFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180
Query: 181 LLRRDEEMFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRIRPQ 240
LLRRDEE+FGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGR+RPQ
Sbjct: 181 LLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240
Query: 241 EDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFISPLN 300
EDSLSNPIDMVVGTPGRVLQHI+AGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFI PL
Sbjct: 241 EDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300
Query: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSSLHKKIASARHDFIKLSGG 360
HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTS+LHKKIASARHDFIKLSG
Sbjct: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360
Query: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLSENQISTVNYHGEVPAQKRVEN 420
ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFL ENQISTVNYHGEVPAQKRVEN
Sbjct: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420
Query: 421 LKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVT 480
LKKFKSDD DCPTLVCTDLAARGLDLDVDHVIMFDFP NSIDYLHRTGRTARMGAKGKVT
Sbjct: 421 LKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480
Query: 481 SLVAKKDDVLATRIEEAIRKNESLESLTTDNVRRDNARDNITRQKTKNEKLVKVSSERRR 540
SLV KKDD+LATRIEEAI+KNESLESLT D+VRRD ARD IT KTKN KL+K S+ R
Sbjct: 481 SLVGKKDDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTGSR- 540
Query: 541 MQSQSSVVATTRSSSTTKSSSVHSKSPSGKPSSPAKTRKPAVRVSKPVKTLKTIPQKPSS 600
++S KSSSVHSK +GK S +T+KP V VSK VK+ + IP+KPSS
Sbjct: 541 ---------AKSATSAPKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSS 600
Query: 601 ELKKPMTNRRRPGSAIKSPGQKLNVVGFRGRSSSSQSDKRQSVSR 642
E KK + +RRRPGSAIKS GQKLNVVGFRGR S+Q DKR+SVSR
Sbjct: 601 ETKKQVASRRRPGSAIKSSGQKLNVVGFRGR--SNQFDKRRSVSR 633
BLAST of Sed0016760 vs. ExPASy TrEMBL
Match:
A0A1S3CFM7 (DEAD-box ATP-dependent RNA helicase 39 OS=Cucumis melo OX=3656 GN=LOC103500395 PE=4 SV=1)
HSP 1 Score: 993.0 bits (2566), Expect = 5.6e-286
Identity = 537/644 (83.39%), Postives = 565/644 (87.73%), Query Frame = 0
Query: 1 MGGTGRTLLSLSISTNLLISSRLSPPKCLPLFKIPKPITNFSRFRPLCSATAVATTSESM 60
MGGTGRTLLSLSISTNLLISSRLSPPKCLPL KIPKP NFS FRPL SAT T++ES
Sbjct: 1 MGGTGRTLLSLSISTNLLISSRLSPPKCLPLLKIPKPFRNFSGFRPLSSATTATTSTEST 60
Query: 61 ETTQATEPLKHSPLLDRLRARHLKESASTTKLTRNRALQSV----DEAKKVDKQRKKLVE 120
E Q EPLKHS LL+RLR RHLKESA TK TRN QSV DE KK +K+ KKLVE
Sbjct: 61 EAIQVIEPLKHSQLLERLRTRHLKESAPKTKPTRNTLSQSVGSAEDEMKKSEKKNKKLVE 120
Query: 121 SFEELGLTEEVMGAVREMGIEVPTEIQCIGIPAVLDGTSVILGSHTGSGKTLAYLLPLVQ 180
SFEELGL EEVMGAVREMGI+VPTEIQCIGIPAVL+G SVILGSHTGSGKTLAYLLPLVQ
Sbjct: 121 SFEELGLNEEVMGAVREMGIQVPTEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQ 180
Query: 181 LLRRDEEMFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRIRPQ 240
LLRRDEE+FGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGR+RPQ
Sbjct: 181 LLRRDEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQ 240
Query: 241 EDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFISPLN 300
EDSLSNPIDMVVGTPGRVLQHI+AGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFI PL
Sbjct: 241 EDSLSNPIDMVVGTPGRVLQHIQAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLK 300
Query: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSSLHKKIASARHDFIKLSGG 360
HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTS+LHKKIASARHDFIKLSG
Sbjct: 301 HRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGS 360
Query: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLSENQISTVNYHGEVPAQKRVEN 420
ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFL ENQISTVNYHGEVPAQKRVEN
Sbjct: 361 ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVEN 420
Query: 421 LKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVT 480
LKKFKSDD DCPTLVCTDLAARGLDLDVDHVIMFDFP NSIDYLHRTGRTARMGAKGKVT
Sbjct: 421 LKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVT 480
Query: 481 SLVAKKDDVLATRIEEAIRKNESLESLTTDNVRRDNARDNITRQKTKNEKLVKVSSERRR 540
SLV KKDD+LATRIEEAI+KNESLESLT D+VRRD ARD IT KTKN KL+K S+ R
Sbjct: 481 SLVGKKDDILATRIEEAIQKNESLESLTADSVRRDIARDRITEHKTKNAKLIKASTGSR- 540
Query: 541 MQSQSSVVATTRSSSTTKSSSVHSKSPSGKPSSPAKTRKPAVRVSKPVKTLKTIPQKPSS 600
++S KSSSVHSK +GK S +T+KP V VSK VK+ + IP+KPSS
Sbjct: 541 ---------AKSATSAPKSSSVHSKGETGKASYSERTQKPGVPVSKLVKSSRNIPRKPSS 600
Query: 601 ELKKPMTNRRRPGSAIKSPGQKLNVVGFRGRSSSSQSDKRQSVS 641
E KK + +RRRPGSAIKS GQKLNVVGFRGR S+Q DKR+SVS
Sbjct: 601 ETKKQVASRRRPGSAIKSSGQKLNVVGFRGR--SNQFDKRRSVS 632
BLAST of Sed0016760 vs. ExPASy TrEMBL
Match:
A0A6J1F9C3 (DEAD-box ATP-dependent RNA helicase 39 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443261 PE=4 SV=1)
HSP 1 Score: 981.1 bits (2535), Expect = 2.2e-282
Identity = 532/641 (83.00%), Postives = 568/641 (88.61%), Query Frame = 0
Query: 1 MGGTGRTLLSLSISTNLLISSRLSPPKCLPLFKIPKPITNFSRFRPLCSATAVATTSESM 60
MGGTGRTLLSLS+STNLLIS+R+SPPKCL L KIPKPI NFS FRPLCSAT+ AT++ES
Sbjct: 1 MGGTGRTLLSLSVSTNLLISARVSPPKCLSLLKIPKPIRNFSGFRPLCSATSAATSAEST 60
Query: 61 ETTQATEPLKHSPLLDRLRARHLKESASTTKLTRNRALQSVDEAKKVDKQRKKLVESFEE 120
ETTQA EPLKHS LL+RLR RHL ESAS TKL A+ S +E K +++KKLVESFEE
Sbjct: 61 ETTQAIEPLKHSILLERLRTRHLNESASKTKL----AVGSGEEKMKKPEKKKKLVESFEE 120
Query: 121 LGLTEEVMGAVREMGIEVPTEIQCIGIPAVLDGTSVILGSHTGSGKTLAYLLPLVQLLRR 180
LGL EEVMGA+REM IEVPTEIQ IGIPAVL+G SVILGSHTGSGKTLAYLLPLVQLLRR
Sbjct: 121 LGLNEEVMGALREMNIEVPTEIQSIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQLLRR 180
Query: 181 DEEMFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRIRPQEDSL 240
DEE+FGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRIRPQEDSL
Sbjct: 181 DEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRIRPQEDSL 240
Query: 241 SNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFISPLNHRAS 300
SNPIDMVVGTPGRVLQHI+AGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFI PL HRAS
Sbjct: 241 SNPIDMVVGTPGRVLQHIDAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLKHRAS 300
Query: 301 SHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSSLHKKIASARHDFIKLSGGENKL 360
SHD QGFQTIL+TATMTKAVQKLIDEEFQGIVHLRTS+LHKKIASARHDFIKLSG ENK+
Sbjct: 301 SHDGQGFQTILITATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSENKM 360
Query: 361 EALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLSENQISTVNYHGEVPAQKRVENLKKF 420
EALLQVLEPSLAKGNR+MVFCNTLNSSRAVDHFL ENQISTVNYHGEVPAQ+RVENLKKF
Sbjct: 361 EALLQVLEPSLAKGNRIMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQQRVENLKKF 420
Query: 421 KSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVA 480
KSDDADCPTLVCTDLAARGLDLDVDHVIMFDFP NSIDYLHRTGRTARMGAKG VTSLV
Sbjct: 421 KSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGNVTSLVT 480
Query: 481 KKDDVLATRIEEAIRKNESLESLTTDNVRRDNARDN-ITRQKTKNEKLVKVSSERRRMQS 540
KKD++LATRIEEAIRKNESLESLT DNVRRD AR+ IT QKTKNEK VKVS ER R +S
Sbjct: 481 KKDNILATRIEEAIRKNESLESLTADNVRRDIARERMITEQKTKNEKFVKVSKERNRAKS 540
Query: 541 QSSVVATTRSSSTTKSSSVHSKSPSGKPSSPAKTRKPAVRVSKPVKTLKTIPQKPSSELK 600
+S A K SSVHSK SGK +SPAKT+K VRVSK K + +P+KPSSE K
Sbjct: 541 STSPAA--------KPSSVHSKDESGK-ASPAKTQKSGVRVSKSTKPSRNVPRKPSSEPK 600
Query: 601 KPMTNRRRPGSAIKSPGQKLNVVGFRGRSSSSQSDKRQSVS 641
K + +RR+P + IK GQKLNVVGFRGR SSQSDKR+SVS
Sbjct: 601 KQVASRRQPRNGIKPSGQKLNVVGFRGR--SSQSDKRRSVS 626
BLAST of Sed0016760 vs. ExPASy TrEMBL
Match:
A0A6J1IQ01 (DEAD-box ATP-dependent RNA helicase 39 OS=Cucurbita maxima OX=3661 GN=LOC111477141 PE=4 SV=1)
HSP 1 Score: 975.3 bits (2520), Expect = 1.2e-280
Identity = 531/641 (82.84%), Postives = 562/641 (87.68%), Query Frame = 0
Query: 1 MGGTGRTLLSLSISTNLLISSRLSPPKCLPLFKIPKPITNFSRFRPLCSATAVATTSESM 60
MGGTGRTLLSLS+STNLLIS+R+SPPKCL L KIPKPI NFS FRPLCSAT+ T +ES
Sbjct: 1 MGGTGRTLLSLSVSTNLLISARVSPPKCLSLLKIPKPIRNFSGFRPLCSATSATTNAEST 60
Query: 61 ETTQATEPLKHSPLLDRLRARHLKESASTTKLTRNRALQSVDEAKKVDKQRKKLVESFEE 120
ETTQA EPLKHS LL+RLR RHL ESAS TK + S +E K +++KKLVESFEE
Sbjct: 61 ETTQAIEPLKHSILLERLRTRHLNESASKTK----PVVGSGEEKMKKPEKKKKLVESFEE 120
Query: 121 LGLTEEVMGAVREMGIEVPTEIQCIGIPAVLDGTSVILGSHTGSGKTLAYLLPLVQLLRR 180
LGL EEVMGA+REM IEVPTEIQ IGIPAVL+G SVILGSHTGSGKTLAYLLPLVQLLRR
Sbjct: 121 LGLNEEVMGALREMNIEVPTEIQSIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQLLRR 180
Query: 181 DEEMFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRIRPQEDSL 240
DEE+FGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRIRPQEDSL
Sbjct: 181 DEELFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRIRPQEDSL 240
Query: 241 SNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFISPLNHRAS 300
SNPIDMVVGTPGRVLQHI+AGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFI PL HRAS
Sbjct: 241 SNPIDMVVGTPGRVLQHIDAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLKHRAS 300
Query: 301 SHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSSLHKKIASARHDFIKLSGGENKL 360
SHD QGFQTIL+TATMTKAVQKLIDEEFQGIVHLRTS+LHKKIASARHDFIKLSG ENK+
Sbjct: 301 SHDGQGFQTILITATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSENKM 360
Query: 361 EALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLSENQISTVNYHGEVPAQKRVENLKKF 420
EALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFL ENQISTVNYHGEVPAQ+RVENLKKF
Sbjct: 361 EALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQQRVENLKKF 420
Query: 421 KSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVA 480
KSDDADCPTLVCTDLAARGLDLDVDHVIMFDFP NSIDYLHRTGRTARMGAKG VTSLV
Sbjct: 421 KSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGNVTSLVT 480
Query: 481 KKDDVLATRIEEAIRKNESLESLTTDNVRRDNARDN-ITRQKTKNEKLVKVSSERRRMQS 540
KKD +LATRIEEAIRKNESLESLT DNVRRD ARD IT QK KNEKLVKVS ER R +S
Sbjct: 481 KKDHILATRIEEAIRKNESLESLTADNVRRDIARDRMITEQKMKNEKLVKVSKERTRAKS 540
Query: 541 QSSVVATTRSSSTTKSSSVHSKSPSGKPSSPAKTRKPAVRVSKPVKTLKTIPQKPSSELK 600
S+S K SSVHSK SGK SSP KT+K VRVSK K + +P+KPSSE K
Sbjct: 541 ---------STSAAKPSSVHSKDESGKASSPVKTQKSGVRVSKLTKPSRNVPRKPSSEPK 600
Query: 601 KPMTNRRRPGSAIKSPGQKLNVVGFRGRSSSSQSDKRQSVS 641
K +T+RR+ + IK GQKLNVVGFRGR SSQSDKR+SVS
Sbjct: 601 KQVTSRRQSRNGIKPSGQKLNVVGFRGR--SSQSDKRRSVS 626
BLAST of Sed0016760 vs. TAIR 10
Match:
AT4G09730.1 (RH39 )
HSP 1 Score: 759.6 bits (1960), Expect = 2.0e-219
Identity = 422/636 (66.35%), Postives = 507/636 (79.72%), Query Frame = 0
Query: 1 MGGTGRTLLSLSISTNLLISSRLSPPKCLPLFKIPKPITNFSRFRPLCSATAVATTSESM 60
M G RT+LSLS+S++L S++ P P ++ KP + + FRPL S A ATTS
Sbjct: 1 MVGASRTILSLSLSSSLFTFSKI--PHVFPFLRLHKPRFHHA-FRPLYS--AAATTSSPT 60
Query: 61 ETTQATEP--LKHSPLLDRLRARHLKESASTTKLTRNRALQSVDEAKKVDKQRKKLVESF 120
T T+P LKH+ LL+RLR RHLKESA + R ++ V+E + K+ KKLVE+F
Sbjct: 61 TETNVTDPDQLKHTILLERLRLRHLKESAKPPQ-QRPSSVVGVEEESSIRKKSKKLVENF 120
Query: 121 EELGLTEEVMGAVREMGIEVPTEIQCIGIPAVLDGTSVILGSHTGSGKTLAYLLPLVQLL 180
+ELGL+EEVMGA++E+ IEVPTEIQCIGIPAV++ SV+LGSHTGSGKTLAYLLP+VQL+
Sbjct: 121 QELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPIVQLM 180
Query: 181 RRDEEMFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRIRPQED 240
R DE GK KPRRPR VVLCPTRELSEQV+RV+KSISHHARFRS +VSGG RIRPQED
Sbjct: 181 REDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISHHARFRSILVSGGSRIRPQED 240
Query: 241 SLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFISPLNHR 300
SL+N IDMVVGTPGR+LQHIE GNMVYGDI YLVLDEADTMFD GFGP+IRKF++PLN R
Sbjct: 241 SLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRKFLAPLNQR 300
Query: 301 ASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSSLHKKIASARHDFIKLSGGEN 360
A +DQGFQT+LVTATMT AVQKL+DEEFQGI HLRTS+LHKKIA+ARHDFIKLSGGE+
Sbjct: 301 ALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHLRTSTLHKKIANARHDFIKLSGGED 360
Query: 361 KLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLSENQISTVNYHGEVPAQKRVENLK 420
KLEALLQVLEPSLAKG++VMVFCNTLNSSRAVDH+LSENQISTVNYHGEVPA++RVENLK
Sbjct: 361 KLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAEQRVENLK 420
Query: 421 KFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSL 480
KFK ++ DCPTLVCTDLAARGLDLDVDHV+MFDFP NSIDYLHRTGRTARMGAKGKVTSL
Sbjct: 421 KFKDEEGDCPTLVCTDLAARGLDLDVDHVVMFDFPKNSIDYLHRTGRTARMGAKGKVTSL 480
Query: 481 VAKKDDVLATRIEEAIRKNESLESLTTDNVRRDNARDNITRQKTKNEKLVKVSSERRRMQ 540
V++KD +LA RIEEA+R NESLESLTTDNVRRD AR +IT++K ++ K ++ S++R +
Sbjct: 481 VSRKDQMLAARIEEAMRNNESLESLTTDNVRRDAARTHITQEKGRSVKQIREVSKQRNSR 540
Query: 541 SQSSVVATTRSSSTTKSSSVHSKSPSGKPSSPAKTRKPAVRVSKPV-KTLKTIPQKPSSE 600
+ S +++ + +T + KS S S P K P + SKP K LKT+ + +
Sbjct: 541 DKPS--SSSPPARSTGGKTPVRKSSSSSFSKPRKASSPPEKSSKPKRKILKTVGSRSIAA 600
Query: 601 LKKPMTNRRRPGSAIKSPGQKLNVVGFRGRSSSSQS 634
K ++RR PG+KL+VVGFRG+SSS+++
Sbjct: 601 RGKTGSDRR--------PGKKLSVVGFRGKSSSARA 620
BLAST of Sed0016760 vs. TAIR 10
Match:
AT3G06980.1 (DEA(D/H)-box RNA helicase family protein )
HSP 1 Score: 199.5 bits (506), Expect = 8.1e-51
Identity = 134/410 (32.68%), Postives = 217/410 (52.93%), Query Frame = 0
Query: 116 ESFEELGLTEEVMGAVREMGIEVPTEIQCIGIPAVLDGTSVILGSHTGSGKTLAYLLPLV 175
++F E+G +E++M A++E + P IQ + V+DG S I+ +GSGKTLAYL+P++
Sbjct: 374 KTFAEIGCSEDMMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVI 433
Query: 176 QLLRRDEEMFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHH-ARFRSTMVSGGGRIR 235
Q LR +E P PR +VL PT EL+ QV +SIS FRS +V+GG R R
Sbjct: 434 QRLREEELQGHSKSSPGCPRVIVLVPTAELASQVLANCRSISKSGVPFRSMVVTGGFRQR 493
Query: 236 PQEDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFISP 295
Q ++L +D+++ TPGR + G + +++ +LDE D + FG D +F +
Sbjct: 494 TQLENLEQGVDVLIATPGRFTYLMNEGILGLSNLRCAILDEVDIL----FGDD--EFEAA 553
Query: 296 LNHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSSLHKKIASARHDFIKLS 355
L + +S Q + VTAT+ + + E F + +H ++++A +F+
Sbjct: 554 LQNLINSSPVTA-QYLFVTATLPLEIYNKLVEVFPDCEVVMGPRVH-RVSNALEEFLVDC 613
Query: 356 GG------------ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFL-----SEN 415
G +NK ALLQ++E + ++ ++FCN + + R V++ E
Sbjct: 614 SGDDNAEKTPETAFQNKKTALLQIMEENPV--SKTIIFCNKIETCRKVENIFKRVDRKER 673
Query: 416 QISTVNYHGEVPAQKRVENLKKFKSD--DADCPTLVCTDLAARGLDLD-VDHVIMFDFPL 475
Q+ + +H + + R+ N+++F S + + LVCTD A+RG+D VDHV++FDFP
Sbjct: 674 QLHVLPFHAALSQESRLTNMQEFTSSQPEENSLFLVCTDRASRGIDFSGVDHVVLFDFPR 733
Query: 476 NSIDYLHRTGRTAR-MGAKGKVTSLVAKKDDVLATRIEEAIRKNESLESL 504
+ +Y+ R GRTAR KGK V K LA RI E K + +
Sbjct: 734 DPSEYVRRVGRTARGARGKGKAFIFVVGKQVGLARRIIERNEKGHPVHDV 773
BLAST of Sed0016760 vs. TAIR 10
Match:
AT1G55150.1 (DEA(D/H)-box RNA helicase family protein )
HSP 1 Score: 184.5 bits (467), Expect = 2.7e-46
Identity = 123/366 (33.61%), Postives = 188/366 (51.37%), Query Frame = 0
Query: 109 KQRKKLVESFEELGLTEEVMGAVREMGIEVPTEIQCIGIPAVLDGTSVILGSHTGSGKTL 168
K K V+SF ++G + V+ V++ G PT IQ G P + G +I + TGSGKTL
Sbjct: 92 KDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTL 151
Query: 169 AYLLPLVQLLRRDEEMFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVS 228
+YLLP + + L P +VL PTREL+ Q+ + + ++ ++T +
Sbjct: 152 SYLLPAIVHVNAQP----MLAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIY 211
Query: 229 GGGRIRPQEDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDI 288
GG PQ L +++V+ TPGR++ +E+ N + YLVLDEAD M D GF P I
Sbjct: 212 GGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQI 271
Query: 289 RKFISPLNHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSSLHKKIASARH 348
RK + SH QT+ +AT K V++L + + S K A
Sbjct: 272 RKIV--------SHIRPDRQTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIR 331
Query: 349 DFIKLSGGENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLSENQISTVNYHGEV 408
+ + K L+++LE + G+R++VF +T + L + ++ HG+
Sbjct: 332 QIVDVISESQKYNKLVKLLE-DIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDK 391
Query: 409 PAQKRVENLKKFKSDDADCPTLVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTA 468
+R L +F+S + P + TD+AARGLD+ DV +VI +DFP + DY+HR GRT
Sbjct: 392 SQAERDWVLSEFRSGKS--PIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTG 442
Query: 469 RMGAKG 474
R GAKG
Sbjct: 452 RAGAKG 442
BLAST of Sed0016760 vs. TAIR 10
Match:
AT3G01540.2 (DEAD box RNA helicase 1 )
HSP 1 Score: 182.2 bits (461), Expect = 1.3e-45
Identity = 124/375 (33.07%), Postives = 184/375 (49.07%), Query Frame = 0
Query: 117 SFEELGLTEEVMGAVREMGIEVPTEIQCIGIPAVLDGTSVILGSHTGSGKTLAYLLP--- 176
SFE G E++ V G PT IQ P + G ++ + TGSGKTL YL+P
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 177 LVQLLRRDEEMFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRI 236
+Q +R D M P +VL PTREL+ Q+ + +R T + GG
Sbjct: 219 HLQRIRNDSRM--------GPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPK 278
Query: 237 RPQEDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIS 296
PQ L D+VV TPGR+ +E + I YLVLDEAD M D GF P IRK +
Sbjct: 279 GPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVK 338
Query: 297 PLNHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSSLHKKIAS---ARH-D 356
+ + QT++ TAT K V+K+ + + ++ + +A+ +H +
Sbjct: 339 EIPTKR--------QTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIE 398
Query: 357 FIKLSGGENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLSENQISTVNYHGEVP 416
+ + +LE +L+ EP G++V++FC+T + L+ Q HG+
Sbjct: 399 VVAPMEKQRRLEQILRSQEP----GSKVIIFCSTKRMCDQLTRNLT-RQFGAAAIHGDKS 458
Query: 417 AQKRVENLKKFKSDDADCPTLVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTAR 476
+R L +F+S P LV TD+AARGLD+ D+ V+ +DFP DY+HR GRT R
Sbjct: 459 QPERDNVLNQFRS--GRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGR 510
Query: 477 MGAKGKVTSLVAKKD 484
GA G+ + +D
Sbjct: 519 AGATGQAFTFFGDQD 510
BLAST of Sed0016760 vs. TAIR 10
Match:
AT3G01540.1 (DEAD box RNA helicase 1 )
HSP 1 Score: 182.2 bits (461), Expect = 1.3e-45
Identity = 124/375 (33.07%), Postives = 184/375 (49.07%), Query Frame = 0
Query: 117 SFEELGLTEEVMGAVREMGIEVPTEIQCIGIPAVLDGTSVILGSHTGSGKTLAYLLP--- 176
SFE G E++ V G PT IQ P + G ++ + TGSGKTL YL+P
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 177 LVQLLRRDEEMFGKLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRI 236
+Q +R D M P +VL PTREL+ Q+ + +R T + GG
Sbjct: 219 HLQRIRNDSRM--------GPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPK 278
Query: 237 RPQEDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIS 296
PQ L D+VV TPGR+ +E + I YLVLDEAD M D GF P IRK +
Sbjct: 279 GPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVK 338
Query: 297 PLNHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSSLHKKIAS---ARH-D 356
+ + QT++ TAT K V+K+ + + ++ + +A+ +H +
Sbjct: 339 EIPTKR--------QTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIE 398
Query: 357 FIKLSGGENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLSENQISTVNYHGEVP 416
+ + +LE +L+ EP G++V++FC+T + L+ Q HG+
Sbjct: 399 VVAPMEKQRRLEQILRSQEP----GSKVIIFCSTKRMCDQLTRNLT-RQFGAAAIHGDKS 458
Query: 417 AQKRVENLKKFKSDDADCPTLVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTAR 476
+R L +F+S P LV TD+AARGLD+ D+ V+ +DFP DY+HR GRT R
Sbjct: 459 QPERDNVLNQFRS--GRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGR 510
Query: 477 MGAKGKVTSLVAKKD 484
GA G+ + +D
Sbjct: 519 AGATGQAFTFFGDQD 510
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022143665.1 | 4.7e-287 | 84.21 | DEAD-box ATP-dependent RNA helicase 39 [Momordica charantia] | [more] |
TYK14098.1 | 4.0e-286 | 83.41 | DEAD-box ATP-dependent RNA helicase 39 [Cucumis melo var. makuwa] | [more] |
XP_008461901.1 | 1.2e-285 | 83.39 | PREDICTED: DEAD-box ATP-dependent RNA helicase 39 [Cucumis melo] | [more] |
XP_004139692.1 | 4.4e-285 | 83.07 | DEAD-box ATP-dependent RNA helicase 39 [Cucumis sativus] >XP_011659101.1 DEAD-bo... | [more] |
XP_038898304.1 | 1.7e-284 | 84.22 | DEAD-box ATP-dependent RNA helicase 39 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Q56X76 | 2.8e-218 | 66.35 | DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana OX=3702 GN=RH39 P... | [more] |
Q5VRY0 | 1.8e-204 | 64.06 | DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica OX=39947 ... | [more] |
Q0DVX2 | 6.4e-53 | 33.41 | DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa subsp. japonica OX=39947 ... | [more] |
Q2U070 | 2.3e-50 | 34.28 | ATP-dependent RNA helicase dbp2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 4... | [more] |
Q5B0J9 | 1.1e-49 | 33.58 | ATP-dependent RNA helicase dbp2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CPE5 | 2.3e-287 | 84.21 | DEAD-box ATP-dependent RNA helicase 39 OS=Momordica charantia OX=3673 GN=LOC1110... | [more] |
A0A5D3CSB8 | 1.9e-286 | 83.41 | DEAD-box ATP-dependent RNA helicase 39 OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
A0A1S3CFM7 | 5.6e-286 | 83.39 | DEAD-box ATP-dependent RNA helicase 39 OS=Cucumis melo OX=3656 GN=LOC103500395 P... | [more] |
A0A6J1F9C3 | 2.2e-282 | 83.00 | DEAD-box ATP-dependent RNA helicase 39 isoform X2 OS=Cucurbita moschata OX=3662 ... | [more] |
A0A6J1IQ01 | 1.2e-280 | 82.84 | DEAD-box ATP-dependent RNA helicase 39 OS=Cucurbita maxima OX=3661 GN=LOC1114771... | [more] |