Sed0016304 (gene) Chayote v1

Overview


Name	Sed0016304
Type	gene
Organism	Sechium edule (Chayote v1)
Description	AT-hook motif nuclear-localized protein
Location	LG03: 4533495 .. 4534079 (-)
RNA-Seq Expression	Sed0016304
Synteny	Sed0016304

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCTTCAACTTCCTCTCATCCCAAAAAACAGAGACATGATTCTAAAACTGAAGCTAAAGACAACCGCCGCCGACGAGGGCGGCCGCCGGGATCCAAAAACAAGCCTAAGCCACCCGTTGTCATAACCGACGACATTACTCCGGCGGCTCCGGCCAACGCATTCCAATGCCACGTGTTCGAAATCGCCGCCGCCGCCGACATAGCCGATTCCATTTCGAACTACGCCCTCCGCCGCCACCGCGGCCTCTCCGTTCTCAGTGCCACCGGCCCCGTCGCCAACGTCACTCTCCGGCACCCCTCCGCCCCCGCCGGCGTCATCACCCTTCACGACTGCTTCGACATCTTGTCTCTTTCCGGCGCTTTTCTTCCCCCGCCGTCCCCCCAAGGAGCTTTCGGGCTGACCGTCTTTCTCGCCGGCGGCCAGGGGCGGGTCGTCGGCGGGTTGGTTTCCGGTCCACTGATCGCCGCCGGTCCGGTGGTAGTTATTGCAGCTTCGTTTAGTACTGCTATATTTGAAAGATTGCCGGTTGAGGAAGAGAAAAGGGAAATGGAAGAAGATGAGAGGATGATGGTAATTTGA

mRNA sequence

ATGGATTCTTCAACTTCCTCTCATCCCAAAAAACAGAGACATGATTCTAAAACTGAAGCTAAAGACAACCGCCGCCGACGAGGGCGGCCGCCGGGATCCAAAAACAAGCCTAAGCCACCCGTTGTCATAACCGACGACATTACTCCGGCGGCTCCGGCCAACGCATTCCAATGCCACGTGTTCGAAATCGCCGCCGCCGCCGACATAGCCGATTCCATTTCGAACTACGCCCTCCGCCGCCACCGCGGCCTCTCCGTTCTCAGTGCCACCGGCCCCGTCGCCAACGTCACTCTCCGGCACCCCTCCGCCCCCGCCGGCGTCATCACCCTTCACGACTGCTTCGACATCTTGTCTCTTTCCGGCGCTTTTCTTCCCCCGCCGTCCCCCCAAGGAGCTTTCGGGCTGACCGTCTTTCTCGCCGGCGGCCAGGGGCGGGTCGTCGGCGGGTTGGTTTCCGGTCCACTGATCGCCGCCGGTCCGGTGGTAGTTATTGCAGCTTCGTTTAGTACTGCTATATTTGAAAGATTGCCGGTTGAGGAAGAGAAAAGGGAAATGGAAGAAGATGAGAGGATGATGGTAATTTGA

Coding sequence (CDS)

ATGGATTCTTCAACTTCCTCTCATCCCAAAAAACAGAGACATGATTCTAAAACTGAAGCTAAAGACAACCGCCGCCGACGAGGGCGGCCGCCGGGATCCAAAAACAAGCCTAAGCCACCCGTTGTCATAACCGACGACATTACTCCGGCGGCTCCGGCCAACGCATTCCAATGCCACGTGTTCGAAATCGCCGCCGCCGCCGACATAGCCGATTCCATTTCGAACTACGCCCTCCGCCGCCACCGCGGCCTCTCCGTTCTCAGTGCCACCGGCCCCGTCGCCAACGTCACTCTCCGGCACCCCTCCGCCCCCGCCGGCGTCATCACCCTTCACGACTGCTTCGACATCTTGTCTCTTTCCGGCGCTTTTCTTCCCCCGCCGTCCCCCCAAGGAGCTTTCGGGCTGACCGTCTTTCTCGCCGGCGGCCAGGGGCGGGTCGTCGGCGGGTTGGTTTCCGGTCCACTGATCGCCGCCGGTCCGGTGGTAGTTATTGCAGCTTCGTTTAGTACTGCTATATTTGAAAGATTGCCGGTTGAGGAAGAGAAAAGGGAAATGGAAGAAGATGAGAGGATGATGGTAATTTGA

Protein sequence

MDSSTSSHPKKQRHDSKTEAKDNRRRRGRPPGSKNKPKPPVVITDDITPAAPANAFQCHVFEIAAAADIADSISNYALRRHRGLSVLSATGPVANVTLRHPSAPAGVITLHDCFDILSLSGAFLPPPSPQGAFGLTVFLAGGQGRVVGGLVSGPLIAAGPVVVIAASFSTAIFERLPVEEEKREMEEDERMMVI

Homology

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BLAST of Sed0016304 vs. NCBI nr
Match: XP_022955570.1 (AT-hook motif nuclear-localized protein 23-like [Cucurbita moschata])

HSP 1 Score: 212.2 bits (539), Expect = 3.9e-51
Identity = 118/165 (71.52%), Postives = 136/165 (82.42%), Query Frame = 0


Query: 20  AKDNRRRRGRPPGSKNKPKPPVVITDDITPAAPANAFQCHVFEIAAAADIADSISNYALR 79
           AK +RRRRGRPPGSKNKP+PP++IT+     AP NAFQ HVF+I  A DI  SIS +A R
Sbjct: 17  AKIHRRRRGRPPGSKNKPRPPILITNH----AP-NAFQTHVFQITPATDIVHSISTFAHR 76

Query: 80  RHRGLSVLSATGPVANVTLRHPSAPAGVITLHDCFDILSLSGAFLPPPSPQGAFGLTVFL 139
           RH GLS+LS++G VANVTLR P+AP GVITLH+ F+ILSLSGAFLP PSPQ A  LTV L
Sbjct: 77  RHCGLSILSSSGLVANVTLRQPAAPGGVITLHERFEILSLSGAFLPAPSPQWATSLTVCL 136

Query: 140 AGGQGRVVGGLVSGPLIAAGPVVVIAASFSTAIFERLPVEEEKRE 185
           AGGQGRVVGGLVSGPLIAAGPV+VIAASF+ AI+ERL +EE + E
Sbjct: 137 AGGQGRVVGGLVSGPLIAAGPVIVIAASFTNAIYERLQLEEMEME 176

[Close]

BLAST of Sed0016304 vs. NCBI nr
Match: KAG6602652.1 (AT-hook motif nuclear-localized protein 20, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 212.2 bits (539), Expect = 3.9e-51
Identity = 118/165 (71.52%), Postives = 136/165 (82.42%), Query Frame = 0


Query: 20  AKDNRRRRGRPPGSKNKPKPPVVITDDITPAAPANAFQCHVFEIAAAADIADSISNYALR 79
           AK +RRRRGRPPGSKNKP+PP++IT+     AP NAFQ HVF+I  A DIA SIS +A R
Sbjct: 19  AKIHRRRRGRPPGSKNKPRPPILITNH----AP-NAFQTHVFQITPATDIAHSISTFAHR 78

Query: 80  RHRGLSVLSATGPVANVTLRHPSAPAGVITLHDCFDILSLSGAFLPPPSPQGAFGLTVFL 139
           RH GLS+LS++G VANVTLR P+AP GVITLH+ F+ILSLSGAFLP PSPQ A  LTV L
Sbjct: 79  RHCGLSILSSSGLVANVTLRQPAAPGGVITLHERFEILSLSGAFLPAPSPQWATSLTVCL 138

Query: 140 AGGQGRVVGGLVSGPLIAAGPVVVIAASFSTAIFERLPVEEEKRE 185
           A GQGRVVGGLVSGPLIAAGPV+VIAASF+ AI+ERL +EE + E
Sbjct: 139 AAGQGRVVGGLVSGPLIAAGPVIVIAASFTNAIYERLQIEEMEME 178

[Close]

BLAST of Sed0016304 vs. NCBI nr
Match: XP_008233653.1 (PREDICTED: AT-hook motif nuclear-localized protein 15 [Prunus mume])

HSP 1 Score: 210.3 bits (534), Expect = 1.5e-50
Identity = 110/169 (65.09%), Postives = 135/169 (79.88%), Query Frame = 0


Query: 14  HDSKTEAKDNRRRRGRPPGSKNKPKPPVVITDDITPAAPANAFQCHVFEIAAAADIADSI 73
           HDS      NRR RGRPPGSKNKPKPP++IT +       NA + HV EI++ +DI DSI
Sbjct: 88  HDSLEPGSSNRRPRGRPPGSKNKPKPPIIITKE-----SPNALRSHVLEISSGSDIVDSI 147

Query: 74  SNYALRRHRGLSVLSATGPVANVTLRHPSAPAGVITLHDCFDILSLSGAFLPPPSPQGAF 133
           + +A RRHRG+SVLS +G VANVTLRHP+AP+GVITLH  F+ILSLSGAFLP PSP GA 
Sbjct: 148 ATFAQRRHRGVSVLSGSGIVANVTLRHPAAPSGVITLHGRFEILSLSGAFLPSPSPPGAT 207

Query: 134 GLTVFLAGGQGRVVGGLVSGPLIAAGPVVVIAASFSTAIFERLPVEEEK 183
           GLTV+LAGGQG+VVGG V G L+A+GPV+VIAA+F+ A +ERLP+E+E+
Sbjct: 208 GLTVYLAGGQGQVVGGTVMGALVASGPVMVIAATFTNATYERLPLEDEQ 251

[Close]

BLAST of Sed0016304 vs. NCBI nr
Match: XP_034205270.1 (AT-hook motif nuclear-localized protein 15-like [Prunus dulcis] >VVA12513.1 PREDICTED: AT-hook [Prunus dulcis])

HSP 1 Score: 210.3 bits (534), Expect = 1.5e-50
Identity = 110/169 (65.09%), Postives = 135/169 (79.88%), Query Frame = 0


Query: 14  HDSKTEAKDNRRRRGRPPGSKNKPKPPVVITDDITPAAPANAFQCHVFEIAAAADIADSI 73
           HDS      NRR RGRPPGSKNKPKPP++IT +       NA + HV EI++ +DI DSI
Sbjct: 88  HDSLEPGSSNRRPRGRPPGSKNKPKPPIIITKE-----SPNALRSHVLEISSGSDIVDSI 147

Query: 74  SNYALRRHRGLSVLSATGPVANVTLRHPSAPAGVITLHDCFDILSLSGAFLPPPSPQGAF 133
           + +A RRHRG+SVLS +G VANVTLRHP+AP+GVITLH  F+ILSLSGAFLP PSP GA 
Sbjct: 148 ATFAQRRHRGVSVLSGSGIVANVTLRHPAAPSGVITLHGRFEILSLSGAFLPSPSPPGAT 207

Query: 134 GLTVFLAGGQGRVVGGLVSGPLIAAGPVVVIAASFSTAIFERLPVEEEK 183
           GLTV+LAGGQG+VVGG V G L+A+GPV+VIAA+F+ A +ERLP+E+E+
Sbjct: 208 GLTVYLAGGQGQVVGGTVMGALVASGPVMVIAATFTNATYERLPLEDEQ 251

[Close]

BLAST of Sed0016304 vs. NCBI nr
Match: XP_007218339.1 (AT-hook motif nuclear-localized protein 15 [Prunus persica] >ONI24407.1 hypothetical protein PRUPE_2G239000 [Prunus persica])

HSP 1 Score: 209.9 bits (533), Expect = 1.9e-50
Identity = 109/169 (64.50%), Postives = 135/169 (79.88%), Query Frame = 0


Query: 14  HDSKTEAKDNRRRRGRPPGSKNKPKPPVVITDDITPAAPANAFQCHVFEIAAAADIADSI 73
           HDS      NRR RGRPPGSKNKPKPP++IT +       NA + HV EI++ +DI DSI
Sbjct: 88  HDSLEPGSSNRRPRGRPPGSKNKPKPPIIITKE-----SPNALRSHVLEISSGSDIVDSI 147

Query: 74  SNYALRRHRGLSVLSATGPVANVTLRHPSAPAGVITLHDCFDILSLSGAFLPPPSPQGAF 133
           + +A RRHRG+SVLS +G VANVTLRHP+AP+GVITLH  F+ILSLSGAFLP PSP GA 
Sbjct: 148 ATFAQRRHRGVSVLSGSGIVANVTLRHPAAPSGVITLHGRFEILSLSGAFLPSPSPPGAT 207

Query: 134 GLTVFLAGGQGRVVGGLVSGPLIAAGPVVVIAASFSTAIFERLPVEEEK 183
           GLTV+LAGGQG+VVGG V G L+A+GPV+V+AA+F+ A +ERLP+E+E+
Sbjct: 208 GLTVYLAGGQGQVVGGTVMGALVASGPVMVVAATFTNATYERLPLEDEQ 251

[Close]

BLAST of Sed0016304 vs. ExPASy Swiss-Prot
Match: O23620 (AT-hook motif nuclear-localized protein 23 OS=Arabidopsis thaliana OX=3702 GN=AHL23 PE=1 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 4.3e-45
Identity = 93/163 (57.06%), Postives = 120/163 (73.62%), Query Frame = 0


Query: 24  RRRRGRPPGSKNKPKPPVVITDDITPAAPANAFQCHVFEIAAAADIADSISNYALRRHRG 83
           RR RGRPPGSKNKPKPPV+IT +      AN  + H+ E+    D+ D ++ YA RR RG
Sbjct: 82  RRPRGRPPGSKNKPKPPVIITRE-----SANTLRAHILEVTNGCDVFDCVATYARRRQRG 141

Query: 84  LSVLSATGPVANVTLRHPSAPAGVITLHDCFDILSLSGAFLPPPSPQGAFGLTVFLAGGQ 143
           + VLS +G V NV++R PSA   V+TL   F+ILSLSG+FLPPP+P GA  LT+FLAGGQ
Sbjct: 142 ICVLSGSGTVTNVSIRQPSAAGAVVTLQGTFEILSLSGSFLPPPAPPGATSLTIFLAGGQ 201

Query: 144 GRVVGGLVSGPLIAAGPVVVIAASFSTAIFERLPVEEEKREME 187
           G+VVGG V G L AAGPV+VIAASF+   +ERLP+EE++++ +
Sbjct: 202 GQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLEEDEQQQQ 239

[Close]

BLAST of Sed0016304 vs. ExPASy Swiss-Prot
Match: Q6DBQ1 (AT-hook motif nuclear-localized protein 25 OS=Arabidopsis thaliana OX=3702 GN=AHL25 PE=1 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 4.3e-45
Identity = 96/165 (58.18%), Postives = 125/165 (75.76%), Query Frame = 0


Query: 20  AKDNRRRRGRPPGSKNKPKPPVVITDDITPAAPANAFQCHVFEIAAAADIADSISNYALR 79
           +   RR RGRP GSKNKPKPP +IT D       N  + HV E+ + +DI++++S YA R
Sbjct: 59  SSSGRRPRGRPAGSKNKPKPPTIITRD-----SPNVLRSHVLEVTSGSDISEAVSTYATR 118

Query: 80  RHRGLSVLSATGPVANVTLRHPSAPA--GVITLHDCFDILSLSGAFLPPPSPQGAFGLTV 139
           R  G+ ++S TG V NVT+R P+APA  GVITLH  FDILSL+G  LPPP+P GA GLTV
Sbjct: 119 RGCGVCIISGTGAVTNVTIRQPAAPAGGGVITLHGRFDILSLTGTALPPPAPPGAGGLTV 178

Query: 140 FLAGGQGRVVGGLVSGPLIAAGPVVVIAASFSTAIFERLPVEEEK 183
           +LAGGQG+VVGG V+G LIA+GPVV++AASF+ A+++RLP+EEE+
Sbjct: 179 YLAGGQGQVVGGNVAGSLIASGPVVLMAASFANAVYDRLPIEEEE 218

[Close]

BLAST of Sed0016304 vs. ExPASy Swiss-Prot
Match: Q8GWQ2 (AT-hook motif nuclear-localized protein 20 OS=Arabidopsis thaliana OX=3702 GN=AHL20 PE=2 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 9.7e-45
Identity = 97/160 (60.62%), Postives = 123/160 (76.88%), Query Frame = 0


Query: 23  NRRRRGRPPGSKNKPKPPVVITDDITPAAPANAFQCHVFEIAAAADIADSISNYALRRHR 82
           NRR RGRPPGSKNKPK P+ +T D       NA + HV EI+  +D+AD+I++++ RR R
Sbjct: 66  NRRPRGRPPGSKNKPKAPIFVTRD-----SPNALRSHVLEISDGSDVADTIAHFSRRRQR 125

Query: 83  GLSVLSATGPVANVTLRHPSAPAGVITLHDCFDILSLSGAFLPPPSPQGAFGLTVFLAGG 142
           G+ VLS TG VANVTLR  +AP GV++L   F+ILSL+GAFLP PSP G+ GLTV+LAG 
Sbjct: 126 GVCVLSGTGSVANVTLRQAAAPGGVVSLQGRFEILSLTGAFLPGPSPPGSTGLTVYLAGV 185

Query: 143 QGRVVGGLVSGPLIAAGPVVVIAASFSTAIFERLPVEEEK 183
           QG+VVGG V GPL+A G V+VIAA+FS A +ERLP+EEE+
Sbjct: 186 QGQVVGGSVVGPLLAIGSVMVIAATFSNATYERLPMEEEE 220

[Close]

BLAST of Sed0016304 vs. ExPASy Swiss-Prot
Match: O49662 (AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AHL24 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.7e-44
Identity = 95/164 (57.93%), Postives = 122/164 (74.39%), Query Frame = 0


Query: 24  RRRRGRPPGSKNKPKPPVVITDDITPAAPANAFQCHVFEIAAAADIADSISNYALRRHRG 83
           RR RGRP GSKNKPKPP++IT D      ANA + HV EI    D+ +S++ +A RR RG
Sbjct: 105 RRPRGRPAGSKNKPKPPIIITRD-----SANALRTHVMEIGDGCDLVESVATFARRRQRG 164

Query: 84  LSVLSATGPVANVTLRHPS---APAGVITLHDCFDILSLSGAFLPPPSPQGAFGLTVFLA 143
           + V+S TG V NVT+R P    +P  V++LH  F+ILSLSG+FLPPP+P  A GL+V+LA
Sbjct: 165 VCVMSGTGNVTNVTIRQPGSHPSPGSVVSLHGRFEILSLSGSFLPPPAPPTATGLSVYLA 224

Query: 144 GGQGRVVGGLVSGPLIAAGPVVVIAASFSTAIFERLPVEEEKRE 185
           GGQG+VVGG V GPL+ AGPVVV+AASFS A +ERLP+EE++ +
Sbjct: 225 GGQGQVVGGSVVGPLLCAGPVVVMAASFSNAAYERLPLEEDEMQ 263

[Close]

BLAST of Sed0016304 vs. ExPASy Swiss-Prot
Match: O22130 (AT-hook motif nuclear-localized protein 22 OS=Arabidopsis thaliana OX=3702 GN=AHL22 PE=1 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 6.3e-44
Identity = 96/165 (58.18%), Postives = 122/165 (73.94%), Query Frame = 0


Query: 24  RRRRGRPPGSKNKPKPPVVITDDITPAAPANAFQCHVFEIAAAADIADSISNYALRRHRG 83
           RR RGRP GSKNKPKPP++IT D      ANA + HV E+A   D+ +S++ +A RR RG
Sbjct: 89  RRPRGRPAGSKNKPKPPIIITRD-----SANALKSHVMEVANGCDVMESVTVFARRRQRG 148

Query: 84  LSVLSATGPVANVTLRHP-SAPAG---VITLHDCFDILSLSGAFLPPPSPQGAFGLTVFL 143
           + VLS  G V NVT+R P S P G   V+ LH  F+ILSLSG+FLPPP+P  A GLT++L
Sbjct: 149 ICVLSGNGAVTNVTIRQPASVPGGGSSVVNLHGRFEILSLSGSFLPPPAPPAASGLTIYL 208

Query: 144 AGGQGRVVGGLVSGPLIAAGPVVVIAASFSTAIFERLPVEEEKRE 185
           AGGQG+VVGG V GPL+A+GPVV++AASF  A +ERLP+EE+ +E
Sbjct: 209 AGGQGQVVGGSVVGPLMASGPVVIMAASFGNAAYERLPLEEDDQE 248

[Close]

BLAST of Sed0016304 vs. ExPASy TrEMBL
Match: A0A6J1GVG0 (AT-hook motif nuclear-localized protein 23-like OS=Cucurbita moschata OX=3662 GN=LOC111457545 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.9e-51
Identity = 118/165 (71.52%), Postives = 136/165 (82.42%), Query Frame = 0


Query: 20  AKDNRRRRGRPPGSKNKPKPPVVITDDITPAAPANAFQCHVFEIAAAADIADSISNYALR 79
           AK +RRRRGRPPGSKNKP+PP++IT+     AP NAFQ HVF+I  A DI  SIS +A R
Sbjct: 17  AKIHRRRRGRPPGSKNKPRPPILITNH----AP-NAFQTHVFQITPATDIVHSISTFAHR 76

Query: 80  RHRGLSVLSATGPVANVTLRHPSAPAGVITLHDCFDILSLSGAFLPPPSPQGAFGLTVFL 139
           RH GLS+LS++G VANVTLR P+AP GVITLH+ F+ILSLSGAFLP PSPQ A  LTV L
Sbjct: 77  RHCGLSILSSSGLVANVTLRQPAAPGGVITLHERFEILSLSGAFLPAPSPQWATSLTVCL 136

Query: 140 AGGQGRVVGGLVSGPLIAAGPVVVIAASFSTAIFERLPVEEEKRE 185
           AGGQGRVVGGLVSGPLIAAGPV+VIAASF+ AI+ERL +EE + E
Sbjct: 137 AGGQGRVVGGLVSGPLIAAGPVIVIAASFTNAIYERLQLEEMEME 176

[Close]

BLAST of Sed0016304 vs. ExPASy TrEMBL
Match: A0A5E4E9U8 (AT-hook motif nuclear-localized protein OS=Prunus dulcis OX=3755 GN=ALMOND_2B028849 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 7.2e-51
Identity = 110/169 (65.09%), Postives = 135/169 (79.88%), Query Frame = 0


Query: 14  HDSKTEAKDNRRRRGRPPGSKNKPKPPVVITDDITPAAPANAFQCHVFEIAAAADIADSI 73
           HDS      NRR RGRPPGSKNKPKPP++IT +       NA + HV EI++ +DI DSI
Sbjct: 88  HDSLEPGSSNRRPRGRPPGSKNKPKPPIIITKE-----SPNALRSHVLEISSGSDIVDSI 147

Query: 74  SNYALRRHRGLSVLSATGPVANVTLRHPSAPAGVITLHDCFDILSLSGAFLPPPSPQGAF 133
           + +A RRHRG+SVLS +G VANVTLRHP+AP+GVITLH  F+ILSLSGAFLP PSP GA 
Sbjct: 148 ATFAQRRHRGVSVLSGSGIVANVTLRHPAAPSGVITLHGRFEILSLSGAFLPSPSPPGAT 207

Query: 134 GLTVFLAGGQGRVVGGLVSGPLIAAGPVVVIAASFSTAIFERLPVEEEK 183
           GLTV+LAGGQG+VVGG V G L+A+GPV+VIAA+F+ A +ERLP+E+E+
Sbjct: 208 GLTVYLAGGQGQVVGGTVMGALVASGPVMVIAATFTNATYERLPLEDEQ 251

[Close]

BLAST of Sed0016304 vs. ExPASy TrEMBL
Match: M5XDF2 (AT-hook motif nuclear-localized protein OS=Prunus persica OX=3760 GN=PRUPE_2G239000 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 9.4e-51
Identity = 109/169 (64.50%), Postives = 135/169 (79.88%), Query Frame = 0


Query: 14  HDSKTEAKDNRRRRGRPPGSKNKPKPPVVITDDITPAAPANAFQCHVFEIAAAADIADSI 73
           HDS      NRR RGRPPGSKNKPKPP++IT +       NA + HV EI++ +DI DSI
Sbjct: 88  HDSLEPGSSNRRPRGRPPGSKNKPKPPIIITKE-----SPNALRSHVLEISSGSDIVDSI 147

Query: 74  SNYALRRHRGLSVLSATGPVANVTLRHPSAPAGVITLHDCFDILSLSGAFLPPPSPQGAF 133
           + +A RRHRG+SVLS +G VANVTLRHP+AP+GVITLH  F+ILSLSGAFLP PSP GA 
Sbjct: 148 ATFAQRRHRGVSVLSGSGIVANVTLRHPAAPSGVITLHGRFEILSLSGAFLPSPSPPGAT 207

Query: 134 GLTVFLAGGQGRVVGGLVSGPLIAAGPVVVIAASFSTAIFERLPVEEEK 183
           GLTV+LAGGQG+VVGG V G L+A+GPV+V+AA+F+ A +ERLP+E+E+
Sbjct: 208 GLTVYLAGGQGQVVGGTVMGALVASGPVMVVAATFTNATYERLPLEDEQ 251

[Close]

BLAST of Sed0016304 vs. ExPASy TrEMBL
Match: A0A6J5U624 (PPC domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS17119 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.6e-50
Identity = 109/169 (64.50%), Postives = 135/169 (79.88%), Query Frame = 0


Query: 14  HDSKTEAKDNRRRRGRPPGSKNKPKPPVVITDDITPAAPANAFQCHVFEIAAAADIADSI 73
           HDS      NRR RGRPPGSKNKPKPP++IT +       NA + HV EI++ +DI DSI
Sbjct: 88  HDSLEPGSSNRRPRGRPPGSKNKPKPPIIITKE-----SPNALRSHVLEISSGSDIVDSI 147

Query: 74  SNYALRRHRGLSVLSATGPVANVTLRHPSAPAGVITLHDCFDILSLSGAFLPPPSPQGAF 133
           + ++ RRHRG+SVLS +G VANVTLRHP+AP+GVITLH  F+ILSLSGAFLP PSP GA 
Sbjct: 148 ATFSQRRHRGVSVLSGSGIVANVTLRHPAAPSGVITLHGRFEILSLSGAFLPSPSPPGAT 207

Query: 134 GLTVFLAGGQGRVVGGLVSGPLIAAGPVVVIAASFSTAIFERLPVEEEK 183
           GLTV+LAGGQG+VVGG V G L+A+GPV+VIAA+F+ A +ERLP+E+E+
Sbjct: 208 GLTVYLAGGQGQVVGGTVMGALVASGPVMVIAATFTNATYERLPLEDEQ 251

[Close]

BLAST of Sed0016304 vs. ExPASy TrEMBL
Match: A0A5N5F089 (AT-hook motif nuclear-localized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_031613 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 2.7e-50
Identity = 111/169 (65.68%), Postives = 133/169 (78.70%), Query Frame = 0


Query: 14  HDSKTEAKDNRRRRGRPPGSKNKPKPPVVITDDITPAAPANAFQCHVFEIAAAADIADSI 73
           HDS      NRR RGRPPGSKNKPKPPVVIT +       NA + HV EI++ +DI DSI
Sbjct: 85  HDSLEPGSSNRRPRGRPPGSKNKPKPPVVITKE-----SPNALRSHVLEISSGSDIVDSI 144

Query: 74  SNYALRRHRGLSVLSATGPVANVTLRHPSAPAGVITLHDCFDILSLSGAFLPPPSPQGAF 133
           + ++ RRHRG+SVLS +G VANVTLR P+AP GVITLH  F+ILSLSGAFLP PSP GA 
Sbjct: 145 ATFSQRRHRGVSVLSGSGIVANVTLRQPAAPTGVITLHGRFEILSLSGAFLPAPSPPGAT 204

Query: 134 GLTVFLAGGQGRVVGGLVSGPLIAAGPVVVIAASFSTAIFERLPVEEEK 183
           GLTV+LAGGQG+VVGG V G L+A+GPV+VIAA+F+ A +ERLP+EEE+
Sbjct: 205 GLTVYLAGGQGQVVGGTVMGALVASGPVIVIAATFTNATYERLPLEEEQ 248

[Close]

BLAST of Sed0016304 vs. TAIR 10
Match: AT4G17800.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 182.6 bits (462), Expect = 3.1e-46
Identity = 93/163 (57.06%), Postives = 120/163 (73.62%), Query Frame = 0


Query: 24  RRRRGRPPGSKNKPKPPVVITDDITPAAPANAFQCHVFEIAAAADIADSISNYALRRHRG 83
           RR RGRPPGSKNKPKPPV+IT +      AN  + H+ E+    D+ D ++ YA RR RG
Sbjct: 82  RRPRGRPPGSKNKPKPPVIITRE-----SANTLRAHILEVTNGCDVFDCVATYARRRQRG 141

Query: 84  LSVLSATGPVANVTLRHPSAPAGVITLHDCFDILSLSGAFLPPPSPQGAFGLTVFLAGGQ 143
           + VLS +G V NV++R PSA   V+TL   F+ILSLSG+FLPPP+P GA  LT+FLAGGQ
Sbjct: 142 ICVLSGSGTVTNVSIRQPSAAGAVVTLQGTFEILSLSGSFLPPPAPPGATSLTIFLAGGQ 201

Query: 144 GRVVGGLVSGPLIAAGPVVVIAASFSTAIFERLPVEEEKREME 187
           G+VVGG V G L AAGPV+VIAASF+   +ERLP+EE++++ +
Sbjct: 202 GQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLEEDEQQQQ 239

[Close]

BLAST of Sed0016304 vs. TAIR 10
Match: AT4G35390.1 (AT-hook protein of GA feedback 1 )

HSP 1 Score: 182.6 bits (462), Expect = 3.1e-46
Identity = 96/165 (58.18%), Postives = 125/165 (75.76%), Query Frame = 0


Query: 20  AKDNRRRRGRPPGSKNKPKPPVVITDDITPAAPANAFQCHVFEIAAAADIADSISNYALR 79
           +   RR RGRP GSKNKPKPP +IT D       N  + HV E+ + +DI++++S YA R
Sbjct: 59  SSSGRRPRGRPAGSKNKPKPPTIITRD-----SPNVLRSHVLEVTSGSDISEAVSTYATR 118

Query: 80  RHRGLSVLSATGPVANVTLRHPSAPA--GVITLHDCFDILSLSGAFLPPPSPQGAFGLTV 139
           R  G+ ++S TG V NVT+R P+APA  GVITLH  FDILSL+G  LPPP+P GA GLTV
Sbjct: 119 RGCGVCIISGTGAVTNVTIRQPAAPAGGGVITLHGRFDILSLTGTALPPPAPPGAGGLTV 178

Query: 140 FLAGGQGRVVGGLVSGPLIAAGPVVVIAASFSTAIFERLPVEEEK 183
           +LAGGQG+VVGG V+G LIA+GPVV++AASF+ A+++RLP+EEE+
Sbjct: 179 YLAGGQGQVVGGNVAGSLIASGPVVLMAASFANAVYDRLPIEEEE 218

[Close]

BLAST of Sed0016304 vs. TAIR 10
Match: AT4G14465.1 (AT-hook motif nuclear-localized protein 20 )

HSP 1 Score: 181.4 bits (459), Expect = 6.9e-46
Identity = 97/160 (60.62%), Postives = 123/160 (76.88%), Query Frame = 0


Query: 23  NRRRRGRPPGSKNKPKPPVVITDDITPAAPANAFQCHVFEIAAAADIADSISNYALRRHR 82
           NRR RGRPPGSKNKPK P+ +T D       NA + HV EI+  +D+AD+I++++ RR R
Sbjct: 66  NRRPRGRPPGSKNKPKAPIFVTRD-----SPNALRSHVLEISDGSDVADTIAHFSRRRQR 125

Query: 83  GLSVLSATGPVANVTLRHPSAPAGVITLHDCFDILSLSGAFLPPPSPQGAFGLTVFLAGG 142
           G+ VLS TG VANVTLR  +AP GV++L   F+ILSL+GAFLP PSP G+ GLTV+LAG 
Sbjct: 126 GVCVLSGTGSVANVTLRQAAAPGGVVSLQGRFEILSLTGAFLPGPSPPGSTGLTVYLAGV 185

Query: 143 QGRVVGGLVSGPLIAAGPVVVIAASFSTAIFERLPVEEEK 183
           QG+VVGG V GPL+A G V+VIAA+FS A +ERLP+EEE+
Sbjct: 186 QGQVVGGSVVGPLLAIGSVMVIAATFSNATYERLPMEEEE 220

[Close]

BLAST of Sed0016304 vs. TAIR 10
Match: AT4G22810.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 179.5 bits (454), Expect = 2.6e-45
Identity = 95/164 (57.93%), Postives = 122/164 (74.39%), Query Frame = 0


Query: 24  RRRRGRPPGSKNKPKPPVVITDDITPAAPANAFQCHVFEIAAAADIADSISNYALRRHRG 83
           RR RGRP GSKNKPKPP++IT D      ANA + HV EI    D+ +S++ +A RR RG
Sbjct: 105 RRPRGRPAGSKNKPKPPIIITRD-----SANALRTHVMEIGDGCDLVESVATFARRRQRG 164

Query: 84  LSVLSATGPVANVTLRHPS---APAGVITLHDCFDILSLSGAFLPPPSPQGAFGLTVFLA 143
           + V+S TG V NVT+R P    +P  V++LH  F+ILSLSG+FLPPP+P  A GL+V+LA
Sbjct: 165 VCVMSGTGNVTNVTIRQPGSHPSPGSVVSLHGRFEILSLSGSFLPPPAPPTATGLSVYLA 224

Query: 144 GGQGRVVGGLVSGPLIAAGPVVVIAASFSTAIFERLPVEEEKRE 185
           GGQG+VVGG V GPL+ AGPVVV+AASFS A +ERLP+EE++ +
Sbjct: 225 GGQGQVVGGSVVGPLLCAGPVVVMAASFSNAAYERLPLEEDEMQ 263

[Close]

BLAST of Sed0016304 vs. TAIR 10
Match: AT2G45430.1 (AT-hook motif nuclear-localized protein 22 )

HSP 1 Score: 178.7 bits (452), Expect = 4.5e-45
Identity = 96/165 (58.18%), Postives = 122/165 (73.94%), Query Frame = 0


Query: 24  RRRRGRPPGSKNKPKPPVVITDDITPAAPANAFQCHVFEIAAAADIADSISNYALRRHRG 83
           RR RGRP GSKNKPKPP++IT D      ANA + HV E+A   D+ +S++ +A RR RG
Sbjct: 89  RRPRGRPAGSKNKPKPPIIITRD-----SANALKSHVMEVANGCDVMESVTVFARRRQRG 148

Query: 84  LSVLSATGPVANVTLRHP-SAPAG---VITLHDCFDILSLSGAFLPPPSPQGAFGLTVFL 143
           + VLS  G V NVT+R P S P G   V+ LH  F+ILSLSG+FLPPP+P  A GLT++L
Sbjct: 149 ICVLSGNGAVTNVTIRQPASVPGGGSSVVNLHGRFEILSLSGSFLPPPAPPAASGLTIYL 208

Query: 144 AGGQGRVVGGLVSGPLIAAGPVVVIAASFSTAIFERLPVEEEKRE 185
           AGGQG+VVGG V GPL+A+GPVV++AASF  A +ERLP+EE+ +E
Sbjct: 209 AGGQGQVVGGSVVGPLMASGPVVIMAASFGNAAYERLPLEEDDQE 248

The following BLAST results are available for this feature:

BLAST of Sed0016304 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022955570.1	3.9e-51	71.52	AT-hook motif nuclear-localized protein 23-like [Cucurbita moschata]	[more]
KAG6602652.1	3.9e-51	71.52	AT-hook motif nuclear-localized protein 20, partial [Cucurbita argyrosperma subs...	[more]
XP_008233653.1	1.5e-50	65.09	PREDICTED: AT-hook motif nuclear-localized protein 15 [Prunus mume]	[more]
XP_034205270.1	1.5e-50	65.09	AT-hook motif nuclear-localized protein 15-like [Prunus dulcis] >VVA12513.1 PRED...	[more]
XP_007218339.1	1.9e-50	64.50	AT-hook motif nuclear-localized protein 15 [Prunus persica] >ONI24407.1 hypothet...	[more]

BLAST of Sed0016304 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23620	4.3e-45	57.06	AT-hook motif nuclear-localized protein 23 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
Q6DBQ1	4.3e-45	58.18	AT-hook motif nuclear-localized protein 25 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
Q8GWQ2	9.7e-45	60.63	AT-hook motif nuclear-localized protein 20 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
O49662	3.7e-44	57.93	AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
O22130	6.3e-44	58.18	AT-hook motif nuclear-localized protein 22 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]

BLAST of Sed0016304 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GVG0	1.9e-51	71.52	AT-hook motif nuclear-localized protein 23-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5E4E9U8	7.2e-51	65.09	AT-hook motif nuclear-localized protein OS=Prunus dulcis OX=3755 GN=ALMOND_2B028...	[more]
M5XDF2	9.4e-51	64.50	AT-hook motif nuclear-localized protein OS=Prunus persica OX=3760 GN=PRUPE_2G239...	[more]
A0A6J5U624	1.6e-50	64.50	PPC domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS17119 ...	[more]
A0A5N5F089	2.7e-50	65.68	AT-hook motif nuclear-localized protein OS=Pyrus ussuriensis x Pyrus communis OX...	[more]

BLAST of Sed0016304 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17800.1	3.1e-46	57.06	Predicted AT-hook DNA-binding family protein	[more]
AT4G35390.1	3.1e-46	58.18	AT-hook protein of GA feedback 1	[more]
AT4G14465.1	6.9e-46	60.63	AT-hook motif nuclear-localized protein 20	[more]
AT4G22810.1	2.6e-45	57.93	Predicted AT-hook DNA-binding family protein	[more]
AT2G45430.1	4.5e-45	58.18	AT-hook motif nuclear-localized protein 22	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014476	AT-hook motif nuclear-localized protein 15-29	PIRSF	PIRSF016021	ESCAROLA	coord: 1..192 e-value: 1.4E-81 score: 271.9
IPR014476	AT-hook motif nuclear-localized protein 15-29	PANTHER	PTHR31100	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15	coord: 11..189
IPR005175	PPC domain	PFAM	PF03479	PCC	coord: 58..169 e-value: 3.0E-23 score: 82.3
IPR005175	PPC domain	PROSITE	PS51742	PPC	coord: 53..189 score: 30.682369
IPR005175	PPC domain	CDD	cd11378	DUF296	coord: 76..168 e-value: 2.71925E-19 score: 77.2406
None	No IPR available	GENE3D	3.30.1330.80		coord: 57..189 e-value: 2.5E-17 score: 65.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	PANTHER	PTHR31100:SF14	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15	coord: 11..189
None	No IPR available	SUPERFAMILY	117856	AF0104/ALDC/Ptd012-like	coord: 53..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0016304.1	Sed0016304.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003680	minor groove of adenine-thymine-rich DNA binding