Sed0016121 (gene) Chayote v1

InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Position :
0
Zoom :
x 1
ATGTACGACATTTTCGCAGACCTTTACGCCATTATCAACGCCGCCGAAAAGCTCGAAAAGGCATACATCCGTGACCTAATCCCTTCCTCCGATTACGAGACCGAATGCTTCGAACTCATCGCCCATTTCAAAACCCTAGCCTCGACGCTCACGGACTCCGTCCCAACCGTCGAGCGATTGGCAGAATCTTACAAAATCGAGTGCCCGGCGGCGATTAACCAGGCCGCCGCCGCTGCCTCCTCCACCGCCTCGGCCGCGATTGTGGCGGAGTGTGTTCAGAACTTCATTACGGCTATGGATTCGGTTAAATTGAATATGGTGGCTGTGGATCAGGTGCATCCGTTGCTATTGGATTTATTGGGTTCTCTGAAGAAATTGAGTATTCTTGGGGCGGATTTTGAAGGGAAGAAGAAGATGAGGGAGTGGCTTGGCCTTTCGAAAACGGGGGCGGGGGAGGAGTTGGCGGAGCAGCAGTCTCGGGAGCTTCACTTTGATCTTGAATCTTCTTATAATTCGTTCATGGCGGCTTTGCCTACTGCTGTACTTTTTTCAGTAACCTACTACTTTTCATCAAAACATTGTCTGAATTATGCATGTGATTCTGATTCAGATTGTGGTAAGAAAAATCTTACTTTAAAACCAGTAGAAAGTGGAATTTTTTGGGGTGCAGATTCCATTGGAGTGCGCTACACAAGTCCAATAATTGCTATGGAAAAAGTGAAAGGATAA100200300400500600700Expect = 1.0E-50 / Score = 172.1Score = Expect = 6.2E-33 / Score = 114.7Score = Expect = 2.6E-19 / Score = 71.5Score = Score = 19.693989Score = 33.83886Score = SequencePF03997PTHR12937G3DSA:1.20.120.1130SSF140427G3DSA:1.20.1440.200PTHR12937:SF3PS51313PS51310SSF140111
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007143Vacuolar protein sorting-associated Vps28PFAMPF03997VPS28coord: 5..177
e-value: 1.0E-50
score: 172.1
IPR007143Vacuolar protein sorting-associated Vps28PANTHERPTHR12937VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28coord: 1..180
IPR037206VPS28, C-terminal domain superfamilyGENE3D1.20.120.1130coord: 80..178
e-value: 6.2E-33
score: 114.7
IPR037206VPS28, C-terminal domain superfamilySUPERFAMILY140427VPS28 C-terminal domain-likecoord: 85..177
IPR038358VPS28, N-terminal domain superfamilyGENE3D1.20.1440.200coord: 1..76
e-value: 2.6E-19
score: 71.5
NoneNo IPR availablePANTHERPTHR12937:SF3VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 28 HOMOLOG 1coord: 1..180
IPR017898Vacuolar protein sorting-associated, VPS28, N-terminalPROSITEPS51313VPS28_Ncoord: 1..85
score: 19.693989
IPR017899Vacuolar protein sorting-associated, VPS28, C-terminalPROSITEPS51310VPS28_Ccoord: 83..178
score: 33.83886
IPR037202ESCRT assembly domainSUPERFAMILY140111Endosomal sorting complex assembly domaincoord: 1..73