Sed0015467 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCAGAGAAGGAAGGGTTCCTCTACAAACCATTCGAGCTAAAATTGATTATTGTTGCTATCCAGTTAGAACTATCTATGGGGTATTAGGCATAAAAATTTGGATATTTGTAGACGAACAATAATAAGCCCTTACTCAACTTGTGTTTACGTTTTATTCAATGATAGAGCGCGAAATGACAAATCAGTCTTTTTCGTTTAAATAAAAAATGAGCAATTCTATAAGGTTAAATAAAAATAAAATTAATCATTTGAGATAATTGCTATGCTTAGTGTGCGACTCGTCGGTTTTTTTAAGGTTAGGATTAAAACGAAAACGAAGGATCAGCCCATACAGAATCTGAACTAATAATTATAAAACTAATAACCAACTCATCGCTTCGCATTATCTGGATCTAAAAAACCAACCAGGCAAGATATGTTATATTGGTCATATCATTGTAGCAACTGAAATTTTTTTGCATAAAAAAAACAATACGATTATGAGTTGTGAAGCAAGAAAAGTATGCGGATAAATGGAAGGGTGAAAGAAAGATAGAAAAAAAATATGAATGATATATAATTCCAATATGGAATATGTAAGGTCTATGGGTCATCTCATAAAAGGTAGTGTAATAAAGCATTAAGACTGATGGATTCATAATTAGATGAATCTGTTCATAGAACAAAAAAGCCAAGAGCCCCGAGACAATAAAGACTGAGAAGATTGACTCAAGAACAAATTTTATTCAGGGCTCCATTGTATAATTAAGACCTAAACATTAATCGAGAGGCGATGGGAACGAGGGAACCCCTGAATACATAATATTCTATTGAAAACGAATCCTAATAATTCATTGGGTAGGATGGCGGAAGGAACCCAAGACCAATCCATTTATTATGAGAGGTCGGTTCATGGGCTAATTAACCCGCGAACCCAAACACATATAAAAAGAGTAAATATTCGCCCGCGAACGTTTCCATTTTATTAGATTTCTAAATTTGGGTCGTATAATCAAATAATAGATAAAAAAAGAAAAGGCAAAACAAAATAAGGATTTATTATAACTGTATAATAAAAGAAAAAATAACAAAACGAGATTCTATATATCTATAATTTTTTAGAAAACTCTAATAAAAAAATTATTCTAGAATCTATAAAGAGTTTCGTTTTCTATCAAAAGAAGATATAAAAATTTCTAATAGATGGATTAAATGGAATCTCAAAGAATCCCACGATTCAATCTATTATTGAATAAATACATGTATATTTTTTTGAATCGTTTCATTCGCGAGGAGCTGGATGAGAAGAAACTCTCATGTCCGGTTCTGTAGTAGAGATGGAATTGAGAAATAACCATCAACTATAACCCCAAAAGAACCAGATTTCGTAAACACCATAGAGGAAGAATGAAAGGAATGTCTTATCGAGGCAATCGTATTTGCTTCGGTAGATACGCTATTCAGGCACTTGAACCCGCTTGGATCACATCTAGACAAATCGAAGCGGGACGAAGGGCAATGACACGAAATGCACGACGCGGCGGAAAAATATGGGTACGTATATTTCCAGACAAACCCGTTACACTAAGACCCACAGAAACACGTATGGGTTCAGGGAAAGGATCCCCCGAATATTGGGTAGCTGTTATTAAACCAGGTAGAATACTTTATGAAATGGGTGGAGTAGCAGAAAATATAGCCAGAAAAGCTATTTCAATAGCGGCGTCCAAACTGCCTATACGAACCCAATTCATTACTTCGGCATAA ATGGATCAGAGAAGGAAGGGAAGAATGAAAGGAATGTCTTATCGAGGCAATCGTATTTGCTTCGGTAGATACGCTATTCAGGCACTTGAACCCGCTTGGATCACATCTAGACAAATCGAAGCGGGACGAAGGGCAATGACACGAAATGCACGACGCGGCGGAAAAATATGGGTACGTATATTTCCAGACAAACCCGTTACACTAAGACCCACAGAAACACGTATGGGTTCAGGGAAAGGATCCCCCGAATATTGGGTAGCTGTTATTAAACCAGGTAGAATACTTTATGAAATGGGTGGAGTAGCAGAAAATATAGCCAGAAAAGCTATTTCAATAGCGGCGTCCAAACTGCCTATACGAACCCAATTCATTACTTCGGCATAA ATGGATCAGAGAAGGAAGGGAAGAATGAAAGGAATGTCTTATCGAGGCAATCGTATTTGCTTCGGTAGATACGCTATTCAGGCACTTGAACCCGCTTGGATCACATCTAGACAAATCGAAGCGGGACGAAGGGCAATGACACGAAATGCACGACGCGGCGGAAAAATATGGGTACGTATATTTCCAGACAAACCCGTTACACTAAGACCCACAGAAACACGTATGGGTTCAGGGAAAGGATCCCCCGAATATTGGGTAGCTGTTATTAAACCAGGTAGAATACTTTATGAAATGGGTGGAGTAGCAGAAAATATAGCCAGAAAAGCTATTTCAATAGCGGCGTCCAAACTGCCTATACGAACCCAATTCATTACTTCGGCATAA MDQRRKGRMKGMSYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVIKPGRILYEMGGVAENIARKAISIAASKLPIRTQFITSA Homology
BLAST of Sed0015467 vs. NCBI nr
Match: QIT04170.1 (ribosomal protein L16 [Sechium edule]) HSP 1 Score: 247.3 bits (630), Expect = 7.2e-62 Identity = 121/125 (96.80%), Postives = 123/125 (98.40%), Query Frame = 0
BLAST of Sed0015467 vs. NCBI nr
Match: YP_009751943.1 (ribosomal protein L16 [Cyclanthera pedata] >QIT04761.1 ribosomal protein L16 [Cyclanthera pedata] >QWQ50120.1 50S ribosomal protein L16 [Cyclanthera pedata]) HSP 1 Score: 245.0 bits (624), Expect = 3.6e-61 Identity = 119/124 (95.97%), Postives = 122/124 (98.39%), Query Frame = 0
BLAST of Sed0015467 vs. NCBI nr
Match: YP_009752280.1 (ribosomal protein L16 [Trichosanthes baviensis] >YP_009752449.1 ribosomal protein L16 [Trichosanthes tricuspidata] >YP_009752618.1 ribosomal protein L16 [Trichosanthes homophylla] >YP_009753211.1 ribosomal protein L16 [Trichosanthes truncata] >YP_009753657.1 ribosomal protein L16 [Trichosanthes wallichiana] >YP_009753742.1 ribosomal protein L16 [Trichosanthes nervifolia] >YP_009753826.1 ribosomal protein L16 [Trichosanthes pilosa] >YP_009753911.1 ribosomal protein L16 [Trichosanthes lobata] >QJD26507.1 ribosomal protein L16 [Trichosanthes kirilowii var. japonica] >QJD26681.1 ribosomal protein L16 [Trichosanthes rosthornii] >QIT04254.1 ribosomal protein L16 [Trichosanthes baviensis] >QIT04676.1 ribosomal protein L16 [Trichosanthes wallichiana] >QIT04845.1 ribosomal protein L16 [Trichosanthes tricuspidata]) HSP 1 Score: 244.6 bits (623), Expect = 4.6e-61 Identity = 118/124 (95.16%), Postives = 122/124 (98.39%), Query Frame = 0
BLAST of Sed0015467 vs. NCBI nr
Match: YP_009560873.1 (ribosomal protein L16 [Trichosanthes kirilowii] >QAB33224.1 ribosomal protein L16 [Trichosanthes kirilowii]) HSP 1 Score: 244.6 bits (623), Expect = 4.6e-61 Identity = 118/124 (95.16%), Postives = 122/124 (98.39%), Query Frame = 0
BLAST of Sed0015467 vs. NCBI nr
Match: YP_009752195.1 (ribosomal protein L16 [Linnaeosicyos amara] >QIT05605.1 ribosomal protein L16 [Linnaeosicyos amara]) HSP 1 Score: 243.8 bits (621), Expect = 7.9e-61 Identity = 117/124 (94.35%), Postives = 122/124 (98.39%), Query Frame = 0
BLAST of Sed0015467 vs. ExPASy Swiss-Prot
Match: Q4VZN1 (50S ribosomal protein L16, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl16 PE=3 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 4.4e-62 Identity = 115/124 (92.74%), Postives = 120/124 (96.77%), Query Frame = 0
BLAST of Sed0015467 vs. ExPASy Swiss-Prot
Match: B1NWI7 (50S ribosomal protein L16, chloroplastic OS=Manihot esculenta OX=3983 GN=rpl16 PE=3 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 7.4e-62 Identity = 113/124 (91.13%), Postives = 122/124 (98.39%), Query Frame = 0
BLAST of Sed0015467 vs. ExPASy Swiss-Prot
Match: Q0ZIY1 (50S ribosomal protein L16, chloroplastic OS=Vitis vinifera OX=29760 GN=rpl16 PE=3 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 7.4e-62 Identity = 113/124 (91.13%), Postives = 121/124 (97.58%), Query Frame = 0
BLAST of Sed0015467 vs. ExPASy Swiss-Prot
Match: Q49KW1 (50S ribosomal protein L16, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=rpl16 PE=3 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 1.7e-61 Identity = 112/124 (90.32%), Postives = 121/124 (97.58%), Query Frame = 0
BLAST of Sed0015467 vs. ExPASy Swiss-Prot
Match: Q09ME0 (50S ribosomal protein L16, chloroplastic OS=Citrus sinensis OX=2711 GN=rpl16 PE=3 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 6.3e-61 Identity = 112/124 (90.32%), Postives = 119/124 (95.97%), Query Frame = 0
BLAST of Sed0015467 vs. ExPASy TrEMBL
Match: A0A6H0EQ66 (50S ribosomal protein L16, chloroplastic OS=Sechium edule OX=184140 GN=rpl16 PE=3 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 3.5e-62 Identity = 121/125 (96.80%), Postives = 123/125 (98.40%), Query Frame = 0
BLAST of Sed0015467 vs. ExPASy TrEMBL
Match: A0A6H0ER52 (50S ribosomal protein L16, chloroplastic OS=Cyclanthera pedata OX=198836 GN=rpl16 PE=3 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 1.7e-61 Identity = 119/124 (95.97%), Postives = 122/124 (98.39%), Query Frame = 0
BLAST of Sed0015467 vs. ExPASy TrEMBL
Match: A0A6M3RTV2 (50S ribosomal protein L16, chloroplastic OS=Trichosanthes kirilowii var. japonica OX=61011 GN=rpl16 PE=3 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 2.3e-61 Identity = 118/124 (95.16%), Postives = 122/124 (98.39%), Query Frame = 0
BLAST of Sed0015467 vs. ExPASy TrEMBL
Match: A0A6H0ESK3 (50S ribosomal protein L16, chloroplastic OS=Trichosanthes tricuspidata OX=654837 GN=rpl16 PE=3 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 2.3e-61 Identity = 118/124 (95.16%), Postives = 122/124 (98.39%), Query Frame = 0
BLAST of Sed0015467 vs. ExPASy TrEMBL
Match: A0A6H0ERE0 (50S ribosomal protein L16, chloroplastic OS=Trichosanthes baviensis OX=1054457 GN=rpl16 PE=3 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 2.3e-61 Identity = 118/124 (95.16%), Postives = 122/124 (98.39%), Query Frame = 0
BLAST of Sed0015467 vs. TAIR 10
Match: ATCG00790.1 (ribosomal protein L16 ) HSP 1 Score: 225.3 bits (573), Expect = 2.7e-59 Identity = 106/124 (85.48%), Postives = 117/124 (94.35%), Query Frame = 0
BLAST of Sed0015467 vs. TAIR 10
Match: AT2G28830.1 (PLANT U-BOX 12 ) HSP 1 Score: 165.2 bits (417), Expect = 3.3e-41 Identity = 85/125 (68.00%), Postives = 103/125 (82.40%), Query Frame = 0
BLAST of Sed0015467 vs. TAIR 10
Match: ATMG00080.1 (ribosomal protein L16 ) HSP 1 Score: 101.7 bits (252), Expect = 4.5e-22 Identity = 56/129 (43.41%), Postives = 79/129 (61.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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