Sed0014928 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAAAAAAAAAAAAAGTTAAAAAAACAAAAGCTCCAATTTTGCATCCATGGCCTCTCAGCAATGCTGCAAACCAGCTCAGCCCAGCCAGCACCAGAAGCCTGACCAACACCAACAAGACCACTGCTTCGGCCACGTGTCCGACAAGATTAAAGGCATCTTCCAAGGCCACCATCACGGCCAAGGTCCGGTGGCGCACGGCCATCCGGGCCATGGCAGTGCCGATGGCCACTGCAAGGCTGCCGGGTCGAAGAAGAAGGAACATCGCAAAAAGAAAGAAGGGGGTTTGCTGCACAAGATTAAGGAGGCCTTCTCGGACCACAGCAGCAGTGATAGCAGTGACGATGAGTGTCACAAAAGGAAGGCAAGTTTTTTTCCTCCAACATTACTCTAAACATTTTTTATAAAGTTTTAGAAGGGTTGATAACCTAAGAAAAAATATTTTGTTTACCAAACATAGTTTTTTAAGTTTTGGATGTCAAGTTAAAGTAGTCGGGTGTTGTCCATAAAGATAATACAATTAAACTATTTTTTATTTTCTATTTTTCTCCTTTCTTTGTCAAGAATTGAATGACTACAAATAGATATCTACCAAGCCATGTATAAAAAAGATATCCAAGTTACGTAGTCAACAAGTTAATTATTTTAATTGCCTATAAATACTTGAAGTAATTTTGTTTTAATAAATAGAAGATTTACTATTTCAATTCATTTCTGTTTTTGCAGAACTGAAAGGAGGAAGAAGGTTACTAGATTGAAGGGAATGAGATAATGCCTTCAAACTACAACTACTAAAGAATTTAGTGACCAAAAGTAAAGATCTATCATGTGGGATAAATAAGACAATTTATGACACCCTTACTTTATCTACTTTGTGTTTCAAATAAACTTTTGTACACTATCTTTGTTACTGACATAATATAGAGCCAAATTATGCATGTCATTATGCATTTATTTTTTTCTTCAAGGAAATATTACATAACATGGATCCTAAAAATTGTTTAAAACAGAGTTGCTCCTGAACGGAGGATAAGCTTTTTGGATGTGTTTGAACCCCCGTTTATGTAAATGGCTGAATTGATTATAATAACACAACCGATATTTGCCCCACTA AAAAAAAAAAAAAAAAAAAAAGTTAAAAAAACAAAAGCTCCAATTTTGCATCCATGGCCTCTCAGCAATGCTGCAAACCAGCTCAGCCCAGCCAGCACCAGAAGCCTGACCAACACCAACAAGACCACTGCTTCGGCCACGTGTCCGACAAGATTAAAGGCATCTTCCAAGGCCACCATCACGGCCAAGGTCCGGTGGCGCACGGCCATCCGGGCCATGGCAGTGCCGATGGCCACTGCAAGGCTGCCGGGTCGAAGAAGAAGGAACATCGCAAAAAGAAAGAAGGGGGTTTGCTGCACAAGATTAAGGAGGCCTTCTCGGACCACAGCAGCAGTGATAGCAGTGACGATGAGTGTCACAAAAGGAAGAACTGAAAGGAGGAAGAAGGTTACTAGATTGAAGGGAATGAGATAATGCCTTCAAACTACAACTACTAAAGAATTTAGTGACCAAAAGTAAAGATCTATCATGTGGGATAAATAAGACAATTTATGACACCCTTACTTTATCTACTTTGTGTTTCAAATAAACTTTTGTACACTATCTTTGTTACTGACATAATATAGAGCCAAATTATGCATGTCATTATGCATTTATTTTTTTCTTCAAGGAAATATTACATAACATGGATCCTAAAAATTGTTTAAAACAGAGTTGCTCCTGAACGGAGGATAAGCTTTTTGGATGTGTTTGAACCCCCGTTTATGTAAATGGCTGAATTGATTATAATAACACAACCGATATTTGCCCCACTA ATGGCCTCTCAGCAATGCTGCAAACCAGCTCAGCCCAGCCAGCACCAGAAGCCTGACCAACACCAACAAGACCACTGCTTCGGCCACGTGTCCGACAAGATTAAAGGCATCTTCCAAGGCCACCATCACGGCCAAGGTCCGGTGGCGCACGGCCATCCGGGCCATGGCAGTGCCGATGGCCACTGCAAGGCTGCCGGGTCGAAGAAGAAGGAACATCGCAAAAAGAAAGAAGGGGGTTTGCTGCACAAGATTAAGGAGGCCTTCTCGGACCACAGCAGCAGTGATAGCAGTGACGATGAGTGTCACAAAAGGAAGAACTGA MASQQCCKPAQPSQHQKPDQHQQDHCFGHVSDKIKGIFQGHHHGQGPVAHGHPGHGSADGHCKAAGSKKKEHRKKKEGGLLHKIKEAFSDHSSSDSSDDECHKRKN Homology
BLAST of Sed0014928 vs. NCBI nr
Match: XP_008437383.1 (PREDICTED: uncharacterized protein LOC103482815 [Cucumis melo]) HSP 1 Score: 110.2 bits (274), Expect = 1.1e-20 Identity = 71/110 (64.55%), Postives = 79/110 (71.82%), Query Frame = 0
BLAST of Sed0014928 vs. NCBI nr
Match: XP_038875375.1 (uncharacterized protein LOC120067846 [Benincasa hispida]) HSP 1 Score: 109.8 bits (273), Expect = 1.5e-20 Identity = 71/113 (62.83%), Postives = 79/113 (69.91%), Query Frame = 0
BLAST of Sed0014928 vs. NCBI nr
Match: XP_022146004.1 (uncharacterized protein LOC111015315 [Momordica charantia]) HSP 1 Score: 94.0 bits (232), Expect = 8.5e-16 Identity = 59/105 (56.19%), Postives = 68/105 (64.76%), Query Frame = 0
BLAST of Sed0014928 vs. NCBI nr
Match: KAA0042689.1 (uncharacterized protein E6C27_scaffold44G001870 [Cucumis melo var. makuwa] >TYK06092.1 uncharacterized protein E5676_scaffold376G001930 [Cucumis melo var. makuwa]) HSP 1 Score: 73.9 bits (180), Expect = 9.1e-10 Identity = 50/84 (59.52%), Postives = 56/84 (66.67%), Query Frame = 0
BLAST of Sed0014928 vs. NCBI nr
Match: XP_022958513.1 (glycine-rich cell wall structural protein 1-like [Cucurbita moschata]) HSP 1 Score: 55.8 bits (133), Expect = 2.6e-04 Identity = 41/99 (41.41%), Postives = 51/99 (51.52%), Query Frame = 0
BLAST of Sed0014928 vs. ExPASy TrEMBL
Match: A0A1S3AUH3 (uncharacterized protein LOC103482815 OS=Cucumis melo OX=3656 GN=LOC103482815 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 5.5e-21 Identity = 71/110 (64.55%), Postives = 79/110 (71.82%), Query Frame = 0
BLAST of Sed0014928 vs. ExPASy TrEMBL
Match: A0A6J1CWW2 (uncharacterized protein LOC111015315 OS=Momordica charantia OX=3673 GN=LOC111015315 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 4.1e-16 Identity = 59/105 (56.19%), Postives = 68/105 (64.76%), Query Frame = 0
BLAST of Sed0014928 vs. ExPASy TrEMBL
Match: A0A5A7TMV4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001930 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 4.4e-10 Identity = 50/84 (59.52%), Postives = 56/84 (66.67%), Query Frame = 0
BLAST of Sed0014928 vs. ExPASy TrEMBL
Match: A0A6J1H399 (glycine-rich cell wall structural protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111459722 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.2e-04 Identity = 41/99 (41.41%), Postives = 51/99 (51.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|