Sed0014352 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACCAGGCTTTCATTCTCTCCCAGACCCAGACCCTTACCCCCTTAACCTACAATACTCGATCCACTAAGATTGATCTTCCAAGAGATTGAGATTGGAGATCCCAACCGGGCTTTGTATTTCTTGTCCATGGTACAGGCCAGTGATTTGAACCCTAAAACTTTTACTTTTGTTGCTATAATTTCTGCATTGGGAAATTATGGGCGGACAGAGGAAACGGAGGCCATCTTTGAGGAAATGAAAGAAGGTGGGTTGAGACCAAGAATTAAGGCTTTCAATGCTCTTCTTAAAGGTTATGTTAAAAAGGGTTCTCTTAAAGAAGTTGAATCTATTGTCTTAGAGATGGAGAAGAGCAGATTATCCCCCGATGAGCACACCTACGGTCTTCTCATTGATTCTTATGCGGATGTGGGCAGATGGGAAAGTGCAAGAACTTTGTTGAAAGAAATGGAAGTGCAGAGCGTACGGCCCAACACCTTCATTTTCAGTAGAATTTTAGCTAGTTATCGTGACCGGGGGTAATGGCAGAGGACATTCGAAGTCTTGAGGGAAATGAAGAGCAGCAATGTCAAGCCCGATAGGCATTTTTACAATGTCATGATTGATACTTTCGATAAATTCAATTGTCTCGATCATGCCATGGAAACATATGACTCAATGCTCTCTGAGGGGATTGAACCGGACGTTGTCACTTGGAACACACTTATAGATTGTCATTGTAAGCATGGATACCATGAAAGAGCTGCTGAGTTGTTTGATGAAATTAAGGAGCGCGGTTATTTACCTTGTTCCACAATATATAAGTTATTTATTGTTGTAACATATTGCCATGTAGGAATAAGTTATATGTTCATACTTTTTTCTTCATTGCTGGTATTGTCTTACAAATGGATGGAAAAATTTGGGATGCACTAAGGTTCTGGAATATTATGAGATGCTTGTTAGACTTGGTTGTTTTGCTTTCCGTTCGTGCTTTACATCTTGGTAAACAGATTATCTAGCTACATTGAATTGATAATCAGAAATTTTTAGTAAATATCATAGTCAAACTATAACTCTTAATTGGGCAAGCTTTTTGAAAATCATGGAATTTCTACATCAATGAAATTGTTTCTAAAATATATGACTTGTGTTTTTAAAAAATAGAATTGTATGTGCTTGTTCAATTAACTCGGCATGTGTGCTACTTACTTTTTACTTTAGTAATTTTGTAAGGTCGACTTCTTTTCTTCTGTTTCTTTAGTTGGTTGTAGTATTTGGATTAGAAACAAGTTTACCATCGAATTTGAAGTCTACGGTTATGTGTAATACTTTTATATGAATAAGCTCATCTGTAATTGTGCCATGGCCAGATCCGCATCATTATTGCTTGTTGTATTTATAAATTTATTTATCCAAATCTAAATTTTAATTTGTTTCTTGAAAATGCATTTAGTGTTCTATTTTATCATTTGACAGGGATTGTCAGAGCAGGCTGTGAATGCATATAGAGTCATGAGATTAGATGGATTAAAGCCCAGTCTCTTTGCTAGATTCATTGATCAATGCATTTGGTGAAAATAGGAGAGACATTAAAGCCTTTGCAGTCTTGCAGTACATGAAGGAAAATGTAAGTGCAGTGTATTTACAATTAACGTTTACATACTTCCATTCTTGATATCAATAATAAAGCTTCTCCATTCATCATGCAAAACTTATTTGGTCCTACAACTGCAGGATGTGAAGCCCGATGTTGTCACATATACGACGCTCATGAAAGCGCTGATTCGTGTCGATAAATTCAACAAGGTAGTTCAAATCGCTGCCTTAAGAACCCTCCATAGCATTAGTCATTATATCTCGTCTTCTACAATTTTCCCATGGTTTTTTAGGGAAATGTTGTCGACCTTAAATGTTAACAAAAAGCTGGACTATGTTTGTGTAACAACCCAGGTTTTCCTTCCGGTTCTATAGGTACGTTCAGTTGATTTTCAGTAGTTGTTTGGGCTGTTAGAGCTTCCAGGGGCATTTTGGTTATTTTGCCTCCCAGCCCGGTTTTATAATTAACCAGGGTTTCAGGGCTGTTGCTATGATTTGTTGACTTCAATTATCCTTCGGTTTCAGGTTCCCACAGTTAGAAGGCATTTTTGAGAAGTTTGGAGGCTTTCCGGTTAAAAGAGAAAAATAAGATTAGTTGTGTTGGAGCTAGGATTCGAACCATGGTGGTTTGGAAGTTGGTTTTGAGCCAAATGAAGAGAAAATAAAATAGATTTTAAAAGTGCTCTTGGTGGGATTTTTGGAGGCATTTTAATATTATAAAAAAAATAGGAAAATCAAAATAGGGTTTTGTCTCTCTCCTTCCCTCTCTTGGCTGATCCCCACACTCTCTCCTTTTCCCTTCCTTGGTCAAATCTCAAACCTCCATTGCCAAGCTTTCAATCTCTCCTCCATAGCTCATCCTCTCCATCTTGCTCCAAGGTAAGTCTTTGCAAACTCTTTCTTTTCTTCTTCTCTTTGCCATGGCCGAACCTAGAGCTAACCAAGGGAAGTTGTTCTTCTCTTCTCCATGGTAGATCCGAGAGCTCTCTCCTCTTGGGCTCAAGATCTCTCCTTGTTGCTTGCATCCAAAAGCTCTTGCTCTTCTCTTTGTTGGTGGAATCCGAGCTCACCCTTCCCCTTCCAACCTCCATTGCCGAGAGCCCTTGGGTAAGTTGTGGTGTTCTTGCTTTGGTTAGTTGTTGATTGTGTAGATCTAACATGGTTCTTCATTTTTGTGCAAAATAAGCCCTAGCCAAATCTCCCTTGCTTGTGCTTCCACCTTGACCGAGACCACCTTGAATCCTTGGAGTCCTTGCCAAATCATCAAAGTGAGCTTGTTGTGCTTGTCGTGTTGACTTGTTTGTGGTGTTGGTTTGGTCGAGAGCTACTTAGTAGCAAGACTGATGTTGCTTCCCTTTGGCCGAG ACCAGGCTTTCATTCTCTCCCAGACCCAGACCCTTACCCCCTTAACCTACAATACTCGATCCACTAAGATTGATCTTCCAAGAGATTGAGATTGGAGATCCCAACCGGGCTTTGTATTTCTTGTCCATGGTACAGGCCAGTGATTTGAACCCTAAAACTTTTACTTTTGTTGCTATAATTTCTGCATTGGGAAATTATGGGCGGACAGAGGAAACGGAGGCCATCTTTGAGGAAATGAAAGAAGGTGGGTTGAGACCAAGAATTAAGGCTTTCAATGCTCTTCTTAAAGGTTATGTTAAAAAGGGTTCTCTTAAAGAAGTTGAATCTATTGTCTTAGAGATGGAGAAGAGCAGATTATCCCCCGATGAGCACACCTACGGTCTTCTCATTGATTCTTATGCGGATGTGGGCAGATGGGAAAGTGCAAGAACTTTGTTGAAAGAAATGGAAGTGCAGAGCGTACGGCCCAACACCTTCATTTTCAGTAGAATTTTAGCTAGTTATCGTGACCGGGGGTAATGGCAGAGGACATTCGAAGTCTTGAGGGAAATGAAGAGCAGCAATGTCAAGCCCGATAGGCATTTTTACAATGTCATGATTGATACTTTCGATAAATTCAATTGTCTCGATCATGCCATGGAAACATATGACTCAATGCTCTCTGAGGGGATTGAACCGGACGTTGTCACTTGGAACACACTTATAGATTGTCATTGGATTGTCAGAGCAGGCTGTGAATGCATATAGAGTCATGAGATTAGATGGATTAAAGCCCAGTCTCTTTGCTAGATTCATTGATCAATGCATTTGGTGAAAATAGGAGAGACATTAAAGCCTTTGCAGTCTTGCAGTACATGAAGGAAAATGATGTGAAGCCCGATGTTGTCACATATACGACGCTCATGAAAGCGCTGATTCGTGTCGATAAATTCAACAAGGGAAATGTTGTCGACCTTAAATGTTAACAAAAAGCTGGACTATGTTTGTGTAACAACCCAGGTTTTCCTTCCGGTTCTATAGGTTCCCACAGTTAGAAGGCATTTTTGAGAAGTTTGGAGGCTTTCCGGTTAAAAGAGAAAAATAAGATTAGTTGTGTTGGAGCTAGGATTCGAACCATGGTGGTTTGGAAGTTGGTTTTGAGCCAAATGAAGAGAAAATAAAATAGATTTTAAAAGTGCTCTTGGTGGGATTTTTGGAGGCATTTTAATATTATAAAAAAAATAGGAAAATCAAAATAGGGTTTTGTCTCTCTCCTTCCCTCTCTTGGCTGATCCCCACACTCTCTCCTTTTCCCTTCCTTGGTCAAATCTCAAACCTCCATTGCCAAGCTTTCAATCTCTCCTCCATAGCTCATCCTCTCCATCTTGCTCCAAGGTAAGTCTTTGCAAACTCTTTCTTTTCTTCTTCTCTTTGCCATGGCCGAACCTAGAGCTAACCAAGGGAAGTTGTTCTTCTCTTCTCCATGGTAGATCCGAGAGCTCTCTCCTCTTGGGCTCAAGATCTCTCCTTGTTGCTTGCATCCAAAAGCTCTTGCTCTTCTCTTTGTTGGTGGAATCCGAGCTCACCCTTCCCCTTCCAACCTCCATTGCCGAGAGCCCTTGGGTAAGTTGTGGTGTTCTTGCTTTGGTTAGTTGTTGATTGTGTAGATCTAACATGGTTCTTCATTTTTGTGCAAAATAAGCCCTAGCCAAATCTCCCTTGCTTGTGCTTCCACCTTGACCGAGACCACCTTGAATCCTTGGAGTCCTTGCCAAATCATCAAAGTGAGCTTGTTGTGCTTGTCGTGTTGACTTGTTTGTGGTGTTGGTTTGGTCGAGAGCTACTTAGTAGCAAGACTGATGTTGCTTCCCTTTGGCCGAG ATGGTACAGGCCAGTGATTTGAACCCTAAAACTTTTACTTTTGTTGCTATAATTTCTGCATTGGGAAATTATGGGCGGACAGAGGAAACGGAGGCCATCTTTGAGGAAATGAAAGAAGGTGGGTTGAGACCAAGAATTAAGGCTTTCAATGCTCTTCTTAAAGGTTATGTTAAAAAGGGTTCTCTTAAAGAAGTTGAATCTATTGTCTTAGAGATGGAGAAGAGCAGATTATCCCCCGATGAGCACACCTACGGTCTTCTCATTGATTCTTATGCGGATGTGGGCAGATGGGAAAGTGCAAGAACTTTGTTGAAAGAAATGGAAGTGCAGAGCGTACGGCCCAACACCTTCATTTTCAGTAGAATTTTAGCTAGTTATCGTGACCGGGGGTAA MVQASDLNPKTFTFVAIISALGNYGRTEETEAIFEEMKEGGLRPRIKAFNALLKGYVKKGSLKEVESIVLEMEKSRLSPDEHTYGLLIDSYADVGRWESARTLLKEMEVQSVRPNTFIFSRILASYRDRG Homology
BLAST of Sed0014352 vs. NCBI nr
Match: XP_022153135.1 (pentatricopeptide repeat-containing protein At5g42310, mitochondrial isoform X2 [Momordica charantia]) HSP 1 Score: 228.0 bits (580), Expect = 4.6e-56 Identity = 114/130 (87.69%), Postives = 121/130 (93.08%), Query Frame = 0
BLAST of Sed0014352 vs. NCBI nr
Match: XP_022153134.1 (pentatricopeptide repeat-containing protein At5g42310, mitochondrial isoform X1 [Momordica charantia]) HSP 1 Score: 228.0 bits (580), Expect = 4.6e-56 Identity = 114/130 (87.69%), Postives = 121/130 (93.08%), Query Frame = 0
BLAST of Sed0014352 vs. NCBI nr
Match: KAG7030042.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 223.0 bits (567), Expect = 1.5e-54 Identity = 111/130 (85.38%), Postives = 120/130 (92.31%), Query Frame = 0
BLAST of Sed0014352 vs. NCBI nr
Match: XP_022999638.1 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic [Cucurbita maxima]) HSP 1 Score: 223.0 bits (567), Expect = 1.5e-54 Identity = 111/130 (85.38%), Postives = 120/130 (92.31%), Query Frame = 0
BLAST of Sed0014352 vs. NCBI nr
Match: XP_022946456.1 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic [Cucurbita moschata]) HSP 1 Score: 223.0 bits (567), Expect = 1.5e-54 Identity = 111/130 (85.38%), Postives = 120/130 (92.31%), Query Frame = 0
BLAST of Sed0014352 vs. ExPASy Swiss-Prot
Match: Q8L844 (Pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRP1 PE=1 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 3.0e-42 Identity = 82/130 (63.08%), Postives = 105/130 (80.77%), Query Frame = 0
BLAST of Sed0014352 vs. ExPASy Swiss-Prot
Match: A0A1D6IEG9 (Pentatricopeptide repeat-containing protein CRP1, chloroplastic OS=Zea mays OX=4577 GN=CRP1 PE=1 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 3.7e-32 Identity = 69/129 (53.49%), Postives = 91/129 (70.54%), Query Frame = 0
BLAST of Sed0014352 vs. ExPASy Swiss-Prot
Match: Q84ZD2 (Pentatricopeptide repeat-containing protein CRP1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0548300 PE=3 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 4.8e-32 Identity = 69/129 (53.49%), Postives = 92/129 (71.32%), Query Frame = 0
BLAST of Sed0014352 vs. ExPASy Swiss-Prot
Match: Q9LYT2 (Pentatricopeptide repeat-containing protein At3g59040 OS=Arabidopsis thaliana OX=3702 GN=At3g59040 PE=2 SV=2) HSP 1 Score: 80.9 bits (198), Expect = 1.2e-14 Identity = 36/125 (28.80%), Postives = 65/125 (52.00%), Query Frame = 0
BLAST of Sed0014352 vs. ExPASy Swiss-Prot
Match: Q940A6 (Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g19440 PE=2 SV=2) HSP 1 Score: 80.1 bits (196), Expect = 2.0e-14 Identity = 38/124 (30.65%), Postives = 67/124 (54.03%), Query Frame = 0
BLAST of Sed0014352 vs. ExPASy TrEMBL
Match: A0A6J1DFY0 (pentatricopeptide repeat-containing protein At5g42310, mitochondrial isoform X2 OS=Momordica charantia OX=3673 GN=LOC111020703 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 2.2e-56 Identity = 114/130 (87.69%), Postives = 121/130 (93.08%), Query Frame = 0
BLAST of Sed0014352 vs. ExPASy TrEMBL
Match: A0A6J1DI55 (pentatricopeptide repeat-containing protein At5g42310, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111020703 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 2.2e-56 Identity = 114/130 (87.69%), Postives = 121/130 (93.08%), Query Frame = 0
BLAST of Sed0014352 vs. ExPASy TrEMBL
Match: A0A6J1KKB7 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493938 PE=4 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 7.2e-55 Identity = 111/130 (85.38%), Postives = 120/130 (92.31%), Query Frame = 0
BLAST of Sed0014352 vs. ExPASy TrEMBL
Match: A0A6J1G3R4 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111450509 PE=4 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 7.2e-55 Identity = 111/130 (85.38%), Postives = 120/130 (92.31%), Query Frame = 0
BLAST of Sed0014352 vs. ExPASy TrEMBL
Match: A0A5A7T6H7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold119G00250 PE=4 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 9.4e-55 Identity = 110/130 (84.62%), Postives = 121/130 (93.08%), Query Frame = 0
BLAST of Sed0014352 vs. TAIR 10
Match: AT5G42310.1 (Pentatricopeptide repeat (PPR-like) superfamily protein ) HSP 1 Score: 172.6 bits (436), Expect = 2.1e-43 Identity = 82/130 (63.08%), Postives = 105/130 (80.77%), Query Frame = 0
BLAST of Sed0014352 vs. TAIR 10
Match: AT3G59040.2 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 80.9 bits (198), Expect = 8.5e-16 Identity = 36/125 (28.80%), Postives = 65/125 (52.00%), Query Frame = 0
BLAST of Sed0014352 vs. TAIR 10
Match: AT3G59040.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 80.9 bits (198), Expect = 8.5e-16 Identity = 36/125 (28.80%), Postives = 65/125 (52.00%), Query Frame = 0
BLAST of Sed0014352 vs. TAIR 10
Match: AT4G19440.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 80.1 bits (196), Expect = 1.4e-15 Identity = 38/124 (30.65%), Postives = 67/124 (54.03%), Query Frame = 0
BLAST of Sed0014352 vs. TAIR 10
Match: AT4G19440.2 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 80.1 bits (196), Expect = 1.4e-15 Identity = 38/124 (30.65%), Postives = 67/124 (54.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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