Sed0014312 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGCAGAGGAGGGAGGAAGCGGCGGCGGCGGCAATGGGCACTGGTGGTGGGCTTTGGCCGGCGCAACGCAGTTAGGTTGGGGTGTCGCCTCCTTCCGGCGAGGTGTGATCGGCGATTCGAGCATCATGCCCTTTAAGGCCTTCGCCGTTGCTTCGCTTTTTGTCGGCGCTGCTGCCTCGTCCGCCATCGCTTCCCTCAAGGCTTCGGGCATCCACAAGGTTGGCTTTACTTCTCCCCCTCGTTTTTGTTTTATTCTTCTAAATTGGGCATTCAATCAGGTGGAGGACGTGATGGAAGTAGGGGCTAATATCAGGAATGGATTGGGGATTCGTCCCAGGACACCAGATGAATGA ATGGAGGCAGAGGAGGGAGGAAGCGGCGGCGGCGGCAATGGGCACTGGTGGTGGGCTTTGGCCGGCGCAACGCAGTTAGGTTGGGGTGTCGCCTCCTTCCGGCGAGGTGTGATCGGCGATTCGAGCATCATGCCCTTTAAGGCCTTCGCCGTTGCTTCGCTTTTTGTCGGCGCTGCTGCCTCGTCCGCCATCGCTTCCCTCAAGGCTTCGGGCATCCACAAGGTTGGCTTTACTTCTCCCCCTCGTTTTTGTTTTATTCTTCTAAATTGGGCATTCAATCAGGTGGAGGACGTGATGGAAGTAGGGGCTAATATCAGGAATGGATTGGGGATTCGTCCCAGGACACCAGATGAATGA ATGGAGGCAGAGGAGGGAGGAAGCGGCGGCGGCGGCAATGGGCACTGGTGGTGGGCTTTGGCCGGCGCAACGCAGTTAGGTTGGGGTGTCGCCTCCTTCCGGCGAGGTGTGATCGGCGATTCGAGCATCATGCCCTTTAAGGCCTTCGCCGTTGCTTCGCTTTTTGTCGGCGCTGCTGCCTCGTCCGCCATCGCTTCCCTCAAGGCTTCGGGCATCCACAAGGTTGGCTTTACTTCTCCCCCTCGTTTTTGTTTTATTCTTCTAAATTGGGCATTCAATCAGGTGGAGGACGTGATGGAAGTAGGGGCTAATATCAGGAATGGATTGGGGATTCGTCCCAGGACACCAGATGAATGA MEAEEGGSGGGGNGHWWWALAGATQLGWGVASFRRGVIGDSSIMPFKAFAVASLFVGAAASSAIASLKASGIHKVGFTSPPRFCFILLNWAFNQVEDVMEVGANIRNGLGIRPRTPDE Homology
BLAST of Sed0014312 vs. NCBI nr
Match: XP_022974845.1 (uncharacterized protein LOC111473617 isoform X1 [Cucurbita maxima] >XP_022975308.1 uncharacterized protein LOC111474468 isoform X1 [Cucurbita maxima]) HSP 1 Score: 159.1 bits (401), Expect = 2.4e-35 Identity = 86/115 (74.78%), Postives = 90/115 (78.26%), Query Frame = 0
BLAST of Sed0014312 vs. NCBI nr
Match: XP_022941577.1 (uncharacterized protein LOC111446882 isoform X2 [Cucurbita moschata] >KAG7028515.1 hypothetical protein SDJN02_09696, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 156.4 bits (394), Expect = 1.5e-34 Identity = 85/115 (73.91%), Postives = 88/115 (76.52%), Query Frame = 0
BLAST of Sed0014312 vs. NCBI nr
Match: KAG6597040.1 (hypothetical protein SDJN03_10220, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 156.4 bits (394), Expect = 1.5e-34 Identity = 85/115 (73.91%), Postives = 88/115 (76.52%), Query Frame = 0
BLAST of Sed0014312 vs. NCBI nr
Match: XP_023540026.1 (uncharacterized protein LOC111800524 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 156.0 bits (393), Expect = 2.0e-34 Identity = 84/115 (73.04%), Postives = 88/115 (76.52%), Query Frame = 0
BLAST of Sed0014312 vs. NCBI nr
Match: XP_022145350.1 (uncharacterized protein LOC111014824 [Momordica charantia]) HSP 1 Score: 146.4 bits (368), Expect = 1.6e-31 Identity = 78/115 (67.83%), Postives = 86/115 (74.78%), Query Frame = 0
BLAST of Sed0014312 vs. ExPASy TrEMBL
Match: A0A6J1IIU1 (uncharacterized protein LOC111473617 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111474468 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 1.2e-35 Identity = 86/115 (74.78%), Postives = 90/115 (78.26%), Query Frame = 0
BLAST of Sed0014312 vs. ExPASy TrEMBL
Match: A0A6J1FMU0 (uncharacterized protein LOC111446882 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446882 PE=4 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 7.5e-35 Identity = 85/115 (73.91%), Postives = 88/115 (76.52%), Query Frame = 0
BLAST of Sed0014312 vs. ExPASy TrEMBL
Match: A0A6J1CU84 (uncharacterized protein LOC111014824 OS=Momordica charantia OX=3673 GN=LOC111014824 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 7.7e-32 Identity = 78/115 (67.83%), Postives = 86/115 (74.78%), Query Frame = 0
BLAST of Sed0014312 vs. ExPASy TrEMBL
Match: A0A1S3AUW2 (uncharacterized protein LOC103483131 OS=Cucumis melo OX=3656 GN=LOC103483131 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 3.3e-30 Identity = 78/115 (67.83%), Postives = 82/115 (71.30%), Query Frame = 0
BLAST of Sed0014312 vs. ExPASy TrEMBL
Match: A0A6J1E8F9 (uncharacterized protein LOC111431802 OS=Cucurbita moschata OX=3662 GN=LOC111431802 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.6e-29 Identity = 76/115 (66.09%), Postives = 83/115 (72.17%), Query Frame = 0
BLAST of Sed0014312 vs. TAIR 10
Match: AT3G60480.1 (unknown protein; Has 17 Blast hits to 17 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 97.4 bits (241), Expect = 7.9e-21 Identity = 52/124 (41.94%), Postives = 72/124 (58.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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