Sed0013381 (gene) Chayote v1

Overview


Name	Sed0013381
Type	gene
Organism	Sechium edule (Chayote v1)
Description	DUF1990 domain-containing protein
Location	LG14: 21478198 .. 21481787 (+)
RNA-Seq Expression	Sed0013381
Synteny	Sed0013381

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTGGTGTGTGGCTTTTGGCACGGACACGTCAGAAGACTCTCCGTTTTCCACTCTACGGCAATGTAGTGAAACGACATGTCGACTTCCAGTTCCATCACATTACTTCTTCACCGCCCAATTTTCCCAGCGCAGAAGTAATTTCAATCCGGTAAGCATATTCTTCCGCTACATTCTTCTCAAATTTGTTATCATTACACTTCTTGATCGATTCCATTTTTGCTGAATCTGAACACTCAATCGACGCTCATGAAATCATCGCCTTTCAAATCAGATTCAGCAGTAATTATCTGTCGATTAGATTCCGATTCTCCTGTAATTTGCCCCAAATTTCTGCTACGAATCGAATCCAGACGCTTCAGTTCAATTCCCGAGCAGTAATATGAGATTTCGTTCCGAGATTTTGACCTAATTCGACTCTACATCGCTGTTTTTTCCTCTGATTTTATGAAATCTCTTTTTGATGCTATTTTTAGGTTTTACCGTACATCGCTTGTTTACAACGCTGAAGATTTTTGAACCATCTGTTTTGTGTTCGTGAATCTTTTTTTTTTTTTTTTAAATTTTTTTTTATTTCAATTAGATTCAGTAGTAATTATCTGTCAATTAGTTTCCAATTCCCTTGTAGTTTTCCCCAAATTTCTGAGCAGTAATGTGTGATTTCGTTCCAAGGTTTTGACCTAATTCGATTGTAGATCGCGGTTTTTTCCTTTGGTTTTATGGTATCTCTTTTTGAACATCTGCTCTGTATTAGTGACTTGATTTTTTTTTTGTTTGATTTGAAGAGGATTGGTGTTGTTGTTAAAGATGGTGTTCTTGTGTTGGTCTCGTCCATCTCCTCAGGAGCAGAAGGCTTGCATTGACAAGTAAAAACAAGGGTAAAATTATAAGTTCCGTTCGTTTAAAGAAAGTTAGAGTTTAGTGTCGTGGTTCCAAAAATTAGAATTTAGTCCTTATGGTCTGAACAAAGTTAGAATTTAGACTCTCTGATTTTAAAAACTAAAACTTAGTCCAATGGTTTGATAAAATCTAAAGATTAGTCTTTGTCGTAATGCAGTGAATTATATATGTGGAAATTAGTTATTCATGCGTAAATAATGTGATTTAATCAATCGCTTAACTCACACTGTCATCATTTACACTTGAATGACTAACTTTCACGTTTTCAATTCGCTAACGATTGAAAACAATAAGGACGATTTTTTAATTTGATCAAATTATAGATTTTAAAACCATAGGAACTAAATTATAACTTTCTTCAGACTACAGGTACTAAATTTTAGTTTTTGAAATCATATGGACTAGAGTCTAACTTTCTTCAAACCAAAGGGACCAAACTTATAATTTACCTAATAATAACCCCCACAAAGAAACAGAATACACTGATTTGATTTTTCTAAGTGAAATGTAAAATGATGTTTATCAAATCAATAGGGCTGGTTCCTTGAACTATAACAGCAAGTTTAAAGGAGCTACTGCTAATCCTATTTCTTGCCTTCAAGAAGATAATGAGCTCTCACAAGAAGGTTTCCTTCTCAACCATGCTCGGATTTTGGTGGGTTCTGGTGTTGAGACTTATGAGAAGGGGAAGAAAGCTCTTCAGAATTGGAGGTTGGCTGTGCAATTTCTTGTTTTAGAGTAACCTAACCTATTAAACGAGAAATCTGAGTCTTACCCGGTTCGAGTTTTGCAGGCATTTTGGATTGAATTGGGCATTTGTTGATTCCTCAACTCCAGTTCATCCGGGAGTGAAGTTTTGTGTCTGTGCCAAGGAGTTCCTTCCTTGGGTGGCAATGCCTCTTCAAATTTTATATGTAAATGAGAACAGGGATCCCAATATGGCTAAGACATCTTTCAGTTATGGCAGTGGTACCCTTCAAGGCCATCTTCTGGTTAGTTGTCCTTTCCCTTCTTCATTTTTTTCCCCTTATTTGCTTGTAGCTTACTTGTTATTGCAAGGAATCAGCCATAGATTGTGAAATAAGAGTTAATATTTCATGCAATTATAGCTTCTGGTGTGAGCTTTGATTTGTTCAATGTCTTTTCTGGATGACTAGGATGTATTACTCAATTGAGTTCTATTTTTATTTGCTAGCTTACTCACACTTCAACTATTCTCACATGACAAATTATCTAACCCTACAACATTTGGATACCAAAGATATTCGTAAGAAATTGACTTCAGGTAGATAGCCACCATGGATTGAATCTATAGTATCTTAGATCCACACATGGCCCTCTATGACCATTGAGCCAACTGGATCAAGCCTTCAACCAAGTCATCCCTTAGTTTCTTGTGATTAAGACATGGCCGAAGTGAGGCTTTGGGGGTATGCTCCCCTCAAGGTCCTGGGTTCGAGACTCACTTGTAACATTATTTCTTCGATGTCTCTGATGTCTTGCCTAGGGACGGACGTGGTTACCCTTCTTTAAACAAAAGACAAACATGGCCGAAGTGCACTAAAGTATCAAGTCTTCGACCAAGTCTCTCTCTTTAGATATGTAGAATAAACAGAGACTTTCATCCAGATCAACACCCCAGAGTCTATCTTCAATATTTGACCCTTGGGAGAATTAGGGAATAATAGAGGGATATATGGACAATTAGTTAGAGAGTTAGTTAGAGGAATATGATTATAAATAGAGAGGTTGTGTGAGGAGAAAAGTATACATATTTTGAGTGATTACATTTTGGGCTCTAAGAGATGACTCTCTAGAGAATGAGAGGTTCTAAGACATATTAAATCTTGGTTTATATTGTAGTTCTTTTATCTCTTGATATTAATCTAGATCCTGAATCTTATCATAAATATTTGGACATCTGCATTGTCTTGTCTCCTTGGATAACATAGTCTATCATTCGTCCTCAAGGAGTGGAACCATATCATAAATATTTGGACATCTGCATTGTCTTGTCTCCTTGGATAACATAGTCTATTATTCGTCCTCAAGGAGTGGCACAATGGTTGAAGACTTGGGCTTTGAGGGTATACTCCCCTCAAGGTTCTGAGTTCGAAACTCACCTGTGACATTACTTCTTCGATGTCTCCGGTGTTTGGCCTAGGGACGGACGTGGTTACCCTTGTTTAAAAAAAAACATAGTCTATCATTCATTTCTTCTAGGCCAAAAACACTTTGTTCTTTTCTAATTTCAATTATTGCTTTTCCCTCCAAATGGGTTTGGCGGTATGTCCTGTGACATTAGTTGAGGTTCGCGCAAGCGCCCGGACAGTCACGAACATCAAAAAAAAAAAACTTGTATTCATTTAATTATGAGTAAGATGATCTTGAATTCTCACAAATTCAGGCCGGTGAAGAACGATTTTCGATCGAGATGGACAAGGACAGTCAGGTGTGGTATGAAATTCTTTCGTTCTCGAAGCCTGCTCACATATTATCATTCCTTAGTTATCCCTACGTAGTTGTTCGGCAAAAGTATTTTGCTTATCAATCTACAAATGCAGTTAAGAAATATTTGACTGCTACTGATTCCTAACTCCTGCTGTATGTATATATTCTTATTATGTAGCATTCAGTCTTTTTTTCCTTAAAGAAACAACTTCATCAAACATCACCAAGATATTAGAAT

mRNA sequence

ATGTGTGGTGTGTGGCTTTTGGCACGGACACGTCAGAAGACTCTCCGTTTTCCACTCTACGGCAATGTAGTGAAACGACATGTCGACTTCCAGTTCCATCACATTACTTCTTCACCGCCCAATTTTCCCAGCGCAGAAGTAATTTCAATCCGAGGATTGGTGTTGTTGTTAAAGATGGTGTTCTTGTGTTGGTCTCGTCCATCTCCTCAGGAGCAGAAGGCTTGCATTGACAAGGCTGGTTCCTTGAACTATAACAGCAAGTTTAAAGGAGCTACTGCTAATCCTATTTCTTGCCTTCAAGAAGATAATGAGCTCTCACAAGAAGGTTTCCTTCTCAACCATGCTCGGATTTTGGTGGGTTCTGGTGTTGAGACTTATGAGAAGGGGAAGAAAGCTCTTCAGAATTGGAGGCATTTTGGATTGAATTGGGCATTTGTTGATTCCTCAACTCCAGTTCATCCGGGAGTGAAGTTTTGTGTCTGTGCCAAGGAGTTCCTTCCTTGGGTGGCAATGCCTCTTCAAATTTTATATGTAAATGAGAACAGGGATCCCAATATGGCTAAGACATCTTTCAGTTATGGCAGTGGTACCCTTCAAGGCCATCTTCTGGCCGGTGAAGAACGATTTTCGATCGAGATGGACAAGGACAGTCAGGTGTGGTATGAAATTCTTTCGTTCTCGAAGCCTGCTCACATATTATCATTCCTTAGTTATCCCTACGTAGTTGTTCGGCAAAAGTATTTTGCTTATCAATCTACAAATGCAGTTAAGAAATATTTGACTGCTACTGATTCCTAACTCCTGCTGTATGTATATATTCTTATTATGTAGCATTCAGTCTTTTTTTCCTTAAAGAAACAACTTCATCAAACATCACCAAGATATTAGAAT

Coding sequence (CDS)

ATGTGTGGTGTGTGGCTTTTGGCACGGACACGTCAGAAGACTCTCCGTTTTCCACTCTACGGCAATGTAGTGAAACGACATGTCGACTTCCAGTTCCATCACATTACTTCTTCACCGCCCAATTTTCCCAGCGCAGAAGTAATTTCAATCCGAGGATTGGTGTTGTTGTTAAAGATGGTGTTCTTGTGTTGGTCTCGTCCATCTCCTCAGGAGCAGAAGGCTTGCATTGACAAGGCTGGTTCCTTGAACTATAACAGCAAGTTTAAAGGAGCTACTGCTAATCCTATTTCTTGCCTTCAAGAAGATAATGAGCTCTCACAAGAAGGTTTCCTTCTCAACCATGCTCGGATTTTGGTGGGTTCTGGTGTTGAGACTTATGAGAAGGGGAAGAAAGCTCTTCAGAATTGGAGGCATTTTGGATTGAATTGGGCATTTGTTGATTCCTCAACTCCAGTTCATCCGGGAGTGAAGTTTTGTGTCTGTGCCAAGGAGTTCCTTCCTTGGGTGGCAATGCCTCTTCAAATTTTATATGTAAATGAGAACAGGGATCCCAATATGGCTAAGACATCTTTCAGTTATGGCAGTGGTACCCTTCAAGGCCATCTTCTGGCCGGTGAAGAACGATTTTCGATCGAGATGGACAAGGACAGTCAGGTGTGGTATGAAATTCTTTCGTTCTCGAAGCCTGCTCACATATTATCATTCCTTAGTTATCCCTACGTAGTTGTTCGGCAAAAGTATTTTGCTTATCAATCTACAAATGCAGTTAAGAAATATTTGACTGCTACTGATTCCTAA

Protein sequence

MCGVWLLARTRQKTLRFPLYGNVVKRHVDFQFHHITSSPPNFPSAEVISIRGLVLLLKMVFLCWSRPSPQEQKACIDKAGSLNYNSKFKGATANPISCLQEDNELSQEGFLLNHARILVGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVAMPLQILYVNENRDPNMAKTSFSYGSGTLQGHLLAGEERFSIEMDKDSQVWYEILSFSKPAHILSFLSYPYVVVRQKYFAYQSTNAVKKYLTATDS

Homology

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BLAST of Sed0013381 vs. NCBI nr
Match: XP_022950650.1 (UPF0548 protein At2g17695 [Cucurbita moschata] >XP_023543885.1 UPF0548 protein At2g17695 [Cucurbita pepo subsp. pepo] >XP_023543886.1 UPF0548 protein At2g17695 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 395.6 bits (1015), Expect = 3.4e-106
Identity = 185/207 (89.37%), Postives = 195/207 (94.20%), Query Frame = 0


Query: 59  MVFLCWSRPSPQEQKACIDKAGSLNYNSKFKGATANPISCLQEDNELSQEGFLLNHARIL 118
           MVFLCWSRPSPQEQK CID++GS NY+SKF+GATANP SCLQED  LSQEGFLLNHARIL
Sbjct: 1   MVFLCWSRPSPQEQKTCIDRSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARIL 60

Query: 119 VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVAMPLQILYV 178
           VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWV MPLQI+YV
Sbjct: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVMPLQIVYV 120

Query: 179 NENRDPNMAKTSFSYGSGTLQGHLLAGEERFSIEMDKDSQVWYEILSFSKPAHILSFLSY 238
           NENR  NMA+T FS+GSGTLQGHLLAGEERFSIEMD +SQVWYEILSFSKPAHILSFLSY
Sbjct: 121 NENRGTNMARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSY 180

Query: 239 PYVVVRQKYFAYQSTNAVKKYLTATDS 266
           PYV++RQKYFAYQSTNAVKKYLTA  S
Sbjct: 181 PYVILRQKYFAYQSTNAVKKYLTAKHS 207

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BLAST of Sed0013381 vs. NCBI nr
Match: XP_022979037.1 (UPF0548 protein At2g17695 [Cucurbita maxima])

HSP 1 Score: 395.2 bits (1014), Expect = 4.4e-106
Identity = 184/207 (88.89%), Postives = 195/207 (94.20%), Query Frame = 0


Query: 59  MVFLCWSRPSPQEQKACIDKAGSLNYNSKFKGATANPISCLQEDNELSQEGFLLNHARIL 118
           MVFLCWSRPSPQEQK CID++GS NY+SKF+GATANP SCLQED  LSQEGFLLNHARIL
Sbjct: 1   MVFLCWSRPSPQEQKTCIDRSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARIL 60

Query: 119 VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVAMPLQILYV 178
           VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWV MPLQI+YV
Sbjct: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVMPLQIVYV 120

Query: 179 NENRDPNMAKTSFSYGSGTLQGHLLAGEERFSIEMDKDSQVWYEILSFSKPAHILSFLSY 238
           NENR  NMA+T FS+GSGTLQGHLLAGEERFSIEMD +SQVWYEILSFSKPAHILSFLSY
Sbjct: 121 NENRGTNMARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSY 180

Query: 239 PYVVVRQKYFAYQSTNAVKKYLTATDS 266
           PY+++RQKYFAYQSTNAVKKYLTA  S
Sbjct: 181 PYIILRQKYFAYQSTNAVKKYLTAKHS 207

[Close]

BLAST of Sed0013381 vs. NCBI nr
Match: XP_038883220.1 (UPF0548 protein At2g17695 isoform X1 [Benincasa hispida] >XP_038883221.1 UPF0548 protein At2g17695 isoform X1 [Benincasa hispida])

HSP 1 Score: 389.8 bits (1000), Expect = 1.9e-104
Identity = 181/207 (87.44%), Postives = 195/207 (94.20%), Query Frame = 0


Query: 59  MVFLCWSRPSPQEQKACIDKAGSLNYNSKFKGATANPISCLQEDNELSQEGFLLNHARIL 118
           MVFLCWSRPSPQ+QKACI++AGS NY+SKF+GATANP +CLQEDN +SQEGFLLNHARIL
Sbjct: 1   MVFLCWSRPSPQDQKACIERAGSFNYSSKFRGATANPSTCLQEDNGISQEGFLLNHARIL 60

Query: 119 VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVAMPLQILYV 178
           VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWV +PLQI+YV
Sbjct: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVYV 120

Query: 179 NENRDPNMAKTSFSYGSGTLQGHLLAGEERFSIEMDKDSQVWYEILSFSKPAHILSFLSY 238
           NENRD   A T FS+GSGTL GHLLAGEERFSIEMD +SQVWYEILSFSKPAHILSFLSY
Sbjct: 121 NENRDTKKAGTCFSFGSGTLHGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSY 180

Query: 239 PYVVVRQKYFAYQSTNAVKKYLTATDS 266
           PYV++RQKYFA+QSTNAVKKYLTAT S
Sbjct: 181 PYVILRQKYFAHQSTNAVKKYLTATHS 207

[Close]

BLAST of Sed0013381 vs. NCBI nr
Match: XP_004134836.1 (UPF0548 protein At2g17695 isoform X1 [Cucumis sativus] >KGN48967.1 hypothetical protein Csa_003747 [Cucumis sativus])

HSP 1 Score: 386.3 bits (991), Expect = 2.1e-103
Identity = 181/208 (87.02%), Postives = 194/208 (93.27%), Query Frame = 0


Query: 59  MVFLCWSRPSPQEQKACIDKAGSLNYNSKFKGATANPISCLQED-NELSQEGFLLNHARI 118
           MVFLCWSRPSPQEQKACI++AGS NYNSKF+GATANP SCLQED   +SQEGFLLNHARI
Sbjct: 1   MVFLCWSRPSPQEQKACIERAGSFNYNSKFRGATANPSSCLQEDKGGISQEGFLLNHARI 60

Query: 119 LVGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVAMPLQILY 178
           LVGSGV TYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWV +PLQI+Y
Sbjct: 61  LVGSGVGTYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVY 120

Query: 179 VNENRDPNMAKTSFSYGSGTLQGHLLAGEERFSIEMDKDSQVWYEILSFSKPAHILSFLS 238
           VNENRD N  +T FS+GSGTLQGHLLAGEERFSIEMD +SQVWYEILSFSKPAHILSFLS
Sbjct: 121 VNENRDTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLS 180

Query: 239 YPYVVVRQKYFAYQSTNAVKKYLTATDS 266
           YPY+++RQKYFA+QSTNAVKKYLT T S
Sbjct: 181 YPYIILRQKYFAHQSTNAVKKYLTPTHS 208

[Close]

BLAST of Sed0013381 vs. NCBI nr
Match: XP_008440884.1 (PREDICTED: UPF0548 protein At2g17695 [Cucumis melo] >XP_008440885.1 PREDICTED: UPF0548 protein At2g17695 [Cucumis melo])

HSP 1 Score: 386.0 bits (990), Expect = 2.7e-103
Identity = 179/207 (86.47%), Postives = 193/207 (93.24%), Query Frame = 0


Query: 59  MVFLCWSRPSPQEQKACIDKAGSLNYNSKFKGATANPISCLQEDNELSQEGFLLNHARIL 118
           MVFLCWSRPSPQEQKACI++AGS NY+SKF+GATANP SCLQED  +SQEGFLLNHARIL
Sbjct: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL 60

Query: 119 VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVAMPLQILYV 178
           VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWV +PLQI+YV
Sbjct: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVYV 120

Query: 179 NENRDPNMAKTSFSYGSGTLQGHLLAGEERFSIEMDKDSQVWYEILSFSKPAHILSFLSY 238
           NENR+ N  +T FS+GSGTLQGHLLAGEERFSIEMD +SQVWYEILS SKPAHILSFLSY
Sbjct: 121 NENRNTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSISKPAHILSFLSY 180

Query: 239 PYVVVRQKYFAYQSTNAVKKYLTATDS 266
           PYV++RQKYFA+QSTNA KKYLT T S
Sbjct: 181 PYVILRQKYFAHQSTNAFKKYLTPTHS 207

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BLAST of Sed0013381 vs. ExPASy Swiss-Prot
Match: Q8GXB1 (UPF0548 protein At2g17695 OS=Arabidopsis thaliana OX=3702 GN=At2g17695 PE=2 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 6.5e-76
Identity = 125/205 (60.98%), Postives = 165/205 (80.49%), Query Frame = 0


Query: 59  MVFLCWSRPSPQEQKACIDKAGSLNYNSKFKGATANPISCLQEDNELSQEGFLLNHARIL 118
           MVFL W RPS ++Q+  I+K G+ NY++K++G ++  I+ L+ED+E+ ++GFL+NHAR+L
Sbjct: 1   MVFLSWGRPSSEQQQQVINKTGTFNYDNKYRGVSSRSIAKLKEDSEIDKDGFLINHARVL 60

Query: 119 VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVAMPLQILYV 178
           VGSG E+YEKGKKALQNW+HFG++WAFVD +TPV  G KFC+C KE LPWV +PLQ++YV
Sbjct: 61  VGSGRESYEKGKKALQNWKHFGMDWAFVDPATPVETGKKFCICVKEVLPWVMLPLQVVYV 120

Query: 179 NENRDPNMAKTSFSYGSGTLQGHLLAGEERFSIEMDKDSQVWYEILSFSKPAHILSFLSY 238
           +E+R        F YGSGTLQGHLLAGEE+FSIE+D + +VWYEI SFSKPAH LSFL Y
Sbjct: 121 DESRKSRKGPAHFGYGSGTLQGHLLAGEEKFSIELDGNGEVWYEITSFSKPAHFLSFLGY 180

Query: 239 PYVVVRQKYFAYQSTNAVKKYLTAT 264
           PYV +RQK+FA  S+ AV K++ A+
Sbjct: 181 PYVKLRQKHFARHSSEAVLKHVNAS 205

[Close]

BLAST of Sed0013381 vs. ExPASy Swiss-Prot
Match: Q86JL6 (UPF0548 protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0271742 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.9e-19
Identity = 61/204 (29.90%), Postives = 99/204 (48.53%), Query Frame = 0


Query: 63  CWSRPSPQEQKACIDKAGSLNYNSKFKGATANPISCLQEDNELSQEGFLLNHARILVGSG 122
           C+ +PS  + K  I+      +       T +  +  + + +     F ++  +I +G+G
Sbjct: 3   CFRKPSDSDIKQYINDRREEQFAYSNLYGTQDYATKEEYEMDPKYSNFDVDQVKIQLGTG 62

Query: 123 VETYEKGKKALQNWRHFGLNWA-FVDSSTPVHPGVKFCVCAKEFLPWVAMPLQILYVNEN 182
           VE ++K   AL+ W+HF L+W  F   +TP+  G    + +K+   W+    +I Y+ + 
Sbjct: 63  VECFQKAVAALKQWKHFDLDWVDFYFKNTPIAVGETVGILSKQVGFWILSFARINYLYDG 122

Query: 183 RDPNMAKTSFSYGSGTLQGHLLAGEERFSIEMDKD-------SQVWYEILSFSKPAHILS 242
            D       F Y  GTL+ H+  GEERF IE  +D         V+YE+LSFS+P++ LS
Sbjct: 123 -DQEDGSIKFGYSYGTLKDHVEKGEERFVIEWVRDPDGAPDKGAVYYEMLSFSEPSYWLS 182

Query: 243 FLSYPYVVVRQKYFAYQSTNAVKK 259
            L YP     Q  F   S N + K
Sbjct: 183 QLGYPVTRYFQNKFVVDSCNQMLK 205

[Close]

BLAST of Sed0013381 vs. ExPASy Swiss-Prot
Match: Q9RST8 (UPF0548 protein DR_2035 OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) OX=243230 GN=DR_2035 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.2e-10
Identity = 44/143 (30.77%), Postives = 70/143 (48.95%), Query Frame = 0


Query: 116 RILVGSGVETYEKGKKALQNWRHFGLNWAF---VDSSTPV-HPGVKFCVCAKEFLPW--- 175
           R+ VG G   +E+ K AL+  + F  +W      ++STP+   G    +  + F PW   
Sbjct: 47  RVRVGEGEACWERAKAALRGGQMF-QDWVLRPHGEASTPLSRQGATVVLLVRHFGPWGRR 106

Query: 176 -----VAMPLQILYVNENRDPNMAKTSFSYGSGTLQGHLLAGEERFSIEMDKDSQVWYEI 235
                  M  ++LY+ +  D       + +G GTL GHL+ GEERF +E D    VW+++
Sbjct: 107 KWGLYSLMTNRVLYLVDEPD------RYGFGYGTLPGHLVRGEERFLLERDAGGAVWFDL 166

Query: 236 LSFSKPAHILSFLSYPYVVVRQK 247
            +FS+ A   S  + P V   Q+
Sbjct: 167 TTFSRAALPFSRFAQPLVGAAQR 182

[Close]

BLAST of Sed0013381 vs. ExPASy TrEMBL
Match: A0A6J1GGC4 (UPF0548 protein At2g17695 OS=Cucurbita moschata OX=3662 GN=LOC111453688 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.6e-106
Identity = 185/207 (89.37%), Postives = 195/207 (94.20%), Query Frame = 0


Query: 59  MVFLCWSRPSPQEQKACIDKAGSLNYNSKFKGATANPISCLQEDNELSQEGFLLNHARIL 118
           MVFLCWSRPSPQEQK CID++GS NY+SKF+GATANP SCLQED  LSQEGFLLNHARIL
Sbjct: 1   MVFLCWSRPSPQEQKTCIDRSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARIL 60

Query: 119 VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVAMPLQILYV 178
           VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWV MPLQI+YV
Sbjct: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVMPLQIVYV 120

Query: 179 NENRDPNMAKTSFSYGSGTLQGHLLAGEERFSIEMDKDSQVWYEILSFSKPAHILSFLSY 238
           NENR  NMA+T FS+GSGTLQGHLLAGEERFSIEMD +SQVWYEILSFSKPAHILSFLSY
Sbjct: 121 NENRGTNMARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSY 180

Query: 239 PYVVVRQKYFAYQSTNAVKKYLTATDS 266
           PYV++RQKYFAYQSTNAVKKYLTA  S
Sbjct: 181 PYVILRQKYFAYQSTNAVKKYLTAKHS 207

[Close]

BLAST of Sed0013381 vs. ExPASy TrEMBL
Match: A0A6J1IMP9 (UPF0548 protein At2g17695 OS=Cucurbita maxima OX=3661 GN=LOC111478798 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 2.2e-106
Identity = 184/207 (88.89%), Postives = 195/207 (94.20%), Query Frame = 0


Query: 59  MVFLCWSRPSPQEQKACIDKAGSLNYNSKFKGATANPISCLQEDNELSQEGFLLNHARIL 118
           MVFLCWSRPSPQEQK CID++GS NY+SKF+GATANP SCLQED  LSQEGFLLNHARIL
Sbjct: 1   MVFLCWSRPSPQEQKTCIDRSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARIL 60

Query: 119 VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVAMPLQILYV 178
           VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWV MPLQI+YV
Sbjct: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVMPLQIVYV 120

Query: 179 NENRDPNMAKTSFSYGSGTLQGHLLAGEERFSIEMDKDSQVWYEILSFSKPAHILSFLSY 238
           NENR  NMA+T FS+GSGTLQGHLLAGEERFSIEMD +SQVWYEILSFSKPAHILSFLSY
Sbjct: 121 NENRGTNMARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSY 180

Query: 239 PYVVVRQKYFAYQSTNAVKKYLTATDS 266
           PY+++RQKYFAYQSTNAVKKYLTA  S
Sbjct: 181 PYIILRQKYFAYQSTNAVKKYLTAKHS 207

[Close]

BLAST of Sed0013381 vs. ExPASy TrEMBL
Match: A0A0A0KKV8 (DUF1990 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G507400 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 1.0e-103
Identity = 181/208 (87.02%), Postives = 194/208 (93.27%), Query Frame = 0


Query: 59  MVFLCWSRPSPQEQKACIDKAGSLNYNSKFKGATANPISCLQED-NELSQEGFLLNHARI 118
           MVFLCWSRPSPQEQKACI++AGS NYNSKF+GATANP SCLQED   +SQEGFLLNHARI
Sbjct: 1   MVFLCWSRPSPQEQKACIERAGSFNYNSKFRGATANPSSCLQEDKGGISQEGFLLNHARI 60

Query: 119 LVGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVAMPLQILY 178
           LVGSGV TYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWV +PLQI+Y
Sbjct: 61  LVGSGVGTYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVY 120

Query: 179 VNENRDPNMAKTSFSYGSGTLQGHLLAGEERFSIEMDKDSQVWYEILSFSKPAHILSFLS 238
           VNENRD N  +T FS+GSGTLQGHLLAGEERFSIEMD +SQVWYEILSFSKPAHILSFLS
Sbjct: 121 VNENRDTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLS 180

Query: 239 YPYVVVRQKYFAYQSTNAVKKYLTATDS 266
           YPY+++RQKYFA+QSTNAVKKYLT T S
Sbjct: 181 YPYIILRQKYFAHQSTNAVKKYLTPTHS 208

[Close]

BLAST of Sed0013381 vs. ExPASy TrEMBL
Match: A0A1S3B2T0 (UPF0548 protein At2g17695 OS=Cucumis melo OX=3656 GN=LOC103485173 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 1.3e-103
Identity = 179/207 (86.47%), Postives = 193/207 (93.24%), Query Frame = 0


Query: 59  MVFLCWSRPSPQEQKACIDKAGSLNYNSKFKGATANPISCLQEDNELSQEGFLLNHARIL 118
           MVFLCWSRPSPQEQKACI++AGS NY+SKF+GATANP SCLQED  +SQEGFLLNHARIL
Sbjct: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL 60

Query: 119 VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVAMPLQILYV 178
           VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWV +PLQI+YV
Sbjct: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVYV 120

Query: 179 NENRDPNMAKTSFSYGSGTLQGHLLAGEERFSIEMDKDSQVWYEILSFSKPAHILSFLSY 238
           NENR+ N  +T FS+GSGTLQGHLLAGEERFSIEMD +SQVWYEILS SKPAHILSFLSY
Sbjct: 121 NENRNTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSISKPAHILSFLSY 180

Query: 239 PYVVVRQKYFAYQSTNAVKKYLTATDS 266
           PYV++RQKYFA+QSTNA KKYLT T S
Sbjct: 181 PYVILRQKYFAHQSTNAFKKYLTPTHS 207

[Close]

BLAST of Sed0013381 vs. ExPASy TrEMBL
Match: A0A6J1CKD3 (UPF0548 protein At2g17695 OS=Momordica charantia OX=3673 GN=LOC111012092 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.4e-100
Identity = 174/205 (84.88%), Postives = 192/205 (93.66%), Query Frame = 0


Query: 59  MVFLCWSRPSPQEQKACIDKAGSLNYNSKFKGATANPISCLQEDNELSQEGFLLNHARIL 118
           MVFLCWSRPSP E KACID++GS NY+SKF+GATANP S L+ED  L QEGFLLNHARIL
Sbjct: 1   MVFLCWSRPSPLEHKACIDRSGSFNYSSKFRGATANPSSSLKEDKGLQQEGFLLNHARIL 60

Query: 119 VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVAMPLQILYV 178
           VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPV+PGVKFCVC+KEFLPWV MPLQI+YV
Sbjct: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVNPGVKFCVCSKEFLPWVVMPLQIVYV 120

Query: 179 NENRDPNMAKTSFSYGSGTLQGHLLAGEERFSIEMDKDSQVWYEILSFSKPAHILSFLSY 238
           NENRD  MA+T FS+GSGTLQGHLLAGEERFSIEMDK++QVWYEILSFSKPAHILSF+SY
Sbjct: 121 NENRDAKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNNQVWYEILSFSKPAHILSFISY 180

Query: 239 PYVVVRQKYFAYQSTNAVKKYLTAT 264
           PYV++RQKYFA+QS+NAVKKY TA+
Sbjct: 181 PYVILRQKYFAHQSSNAVKKYSTAS 205

[Close]

BLAST of Sed0013381 vs. TAIR 10
Match: AT2G17695.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960); Has 259 Blast hits to 259 proteins in 120 species: Archae - 0; Bacteria - 197; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). )

HSP 1 Score: 285.4 bits (729), Expect = 4.6e-77
Identity = 125/205 (60.98%), Postives = 165/205 (80.49%), Query Frame = 0


Query: 59  MVFLCWSRPSPQEQKACIDKAGSLNYNSKFKGATANPISCLQEDNELSQEGFLLNHARIL 118
           MVFL W RPS ++Q+  I+K G+ NY++K++G ++  I+ L+ED+E+ ++GFL+NHAR+L
Sbjct: 1   MVFLSWGRPSSEQQQQVINKTGTFNYDNKYRGVSSRSIAKLKEDSEIDKDGFLINHARVL 60

Query: 119 VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVAMPLQILYV 178
           VGSG E+YEKGKKALQNW+HFG++WAFVD +TPV  G KFC+C KE LPWV +PLQ++YV
Sbjct: 61  VGSGRESYEKGKKALQNWKHFGMDWAFVDPATPVETGKKFCICVKEVLPWVMLPLQVVYV 120

Query: 179 NENRDPNMAKTSFSYGSGTLQGHLLAGEERFSIEMDKDSQVWYEILSFSKPAHILSFLSY 238
           +E+R        F YGSGTLQGHLLAGEE+FSIE+D + +VWYEI SFSKPAH LSFL Y
Sbjct: 121 DESRKSRKGPAHFGYGSGTLQGHLLAGEEKFSIELDGNGEVWYEITSFSKPAHFLSFLGY 180

Query: 239 PYVVVRQKYFAYQSTNAVKKYLTAT 264
           PYV +RQK+FA  S+ AV K++ A+
Sbjct: 181 PYVKLRQKHFARHSSEAVLKHVNAS 205

[Close]

BLAST of Sed0013381 vs. TAIR 10
Match: AT2G17695.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 285.4 bits (729), Expect = 4.6e-77
Identity = 125/205 (60.98%), Postives = 165/205 (80.49%), Query Frame = 0


Query: 59  MVFLCWSRPSPQEQKACIDKAGSLNYNSKFKGATANPISCLQEDNELSQEGFLLNHARIL 118
           MVFL W RPS ++Q+  I+K G+ NY++K++G ++  I+ L+ED+E+ ++GFL+NHAR+L
Sbjct: 1   MVFLSWGRPSSEQQQQVINKTGTFNYDNKYRGVSSRSIAKLKEDSEIDKDGFLINHARVL 60

Query: 119 VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVAMPLQILYV 178
           VGSG E+YEKGKKALQNW+HFG++WAFVD +TPV  G KFC+C KE LPWV +PLQ++YV
Sbjct: 61  VGSGRESYEKGKKALQNWKHFGMDWAFVDPATPVETGKKFCICVKEVLPWVMLPLQVVYV 120

Query: 179 NENRDPNMAKTSFSYGSGTLQGHLLAGEERFSIEMDKDSQVWYEILSFSKPAHILSFLSY 238
           +E+R        F YGSGTLQGHLLAGEE+FSIE+D + +VWYEI SFSKPAH LSFL Y
Sbjct: 121 DESRKSRKGPAHFGYGSGTLQGHLLAGEEKFSIELDGNGEVWYEITSFSKPAHFLSFLGY 180

Query: 239 PYVVVRQKYFAYQSTNAVKKYLTAT 264
           PYV +RQK+FA  S+ AV K++ A+
Sbjct: 181 PYVKLRQKHFARHSSEAVLKHVNAS 205

[Close]

BLAST of Sed0013381 vs. TAIR 10
Match: AT2G17695.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960). )

HSP 1 Score: 285.4 bits (729), Expect = 4.6e-77
Identity = 125/205 (60.98%), Postives = 165/205 (80.49%), Query Frame = 0


Query: 59  MVFLCWSRPSPQEQKACIDKAGSLNYNSKFKGATANPISCLQEDNELSQEGFLLNHARIL 118
           MVFL W RPS ++Q+  I+K G+ NY++K++G ++  I+ L+ED+E+ ++GFL+NHAR+L
Sbjct: 1   MVFLSWGRPSSEQQQQVINKTGTFNYDNKYRGVSSRSIAKLKEDSEIDKDGFLINHARVL 60

Query: 119 VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVAMPLQILYV 178
           VGSG E+YEKGKKALQNW+HFG++WAFVD +TPV  G KFC+C KE LPWV +PLQ++YV
Sbjct: 61  VGSGRESYEKGKKALQNWKHFGMDWAFVDPATPVETGKKFCICVKEVLPWVMLPLQVVYV 120

Query: 179 NENRDPNMAKTSFSYGSGTLQGHLLAGEERFSIEMDKDSQVWYEILSFSKPAHILSFLSY 238
           +E+R        F YGSGTLQGHLLAGEE+FSIE+D + +VWYEI SFSKPAH LSFL Y
Sbjct: 121 DESRKSRKGPAHFGYGSGTLQGHLLAGEEKFSIELDGNGEVWYEITSFSKPAHFLSFLGY 180

Query: 239 PYVVVRQKYFAYQSTNAVKKYLTAT 264
           PYV +RQK+FA  S+ AV K++ A+
Sbjct: 181 PYVKLRQKHFARHSSEAVLKHVNAS 205

The following BLAST results are available for this feature:

BLAST of Sed0013381 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022950650.1	3.4e-106	89.37	UPF0548 protein At2g17695 [Cucurbita moschata] >XP_023543885.1 UPF0548 protein A...	[more]
XP_022979037.1	4.4e-106	88.89	UPF0548 protein At2g17695 [Cucurbita maxima]	[more]
XP_038883220.1	1.9e-104	87.44	UPF0548 protein At2g17695 isoform X1 [Benincasa hispida] >XP_038883221.1 UPF0548...	[more]
XP_004134836.1	2.1e-103	87.02	UPF0548 protein At2g17695 isoform X1 [Cucumis sativus] >KGN48967.1 hypothetical ...	[more]
XP_008440884.1	2.7e-103	86.47	PREDICTED: UPF0548 protein At2g17695 [Cucumis melo] >XP_008440885.1 PREDICTED: U...	[more]

BLAST of Sed0013381 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GXB1	6.5e-76	60.98	UPF0548 protein At2g17695 OS=Arabidopsis thaliana OX=3702 GN=At2g17695 PE=2 SV=1	[more]
Q86JL6	1.9e-19	29.90	UPF0548 protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0271742 PE=3 SV=1	[more]
Q9RST8	1.2e-10	30.77	UPF0548 protein DR_2035 OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 2053...	[more]

BLAST of Sed0013381 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GGC4	1.6e-106	89.37	UPF0548 protein At2g17695 OS=Cucurbita moschata OX=3662 GN=LOC111453688 PE=4 SV=...	[more]
A0A6J1IMP9	2.2e-106	88.89	UPF0548 protein At2g17695 OS=Cucurbita maxima OX=3661 GN=LOC111478798 PE=4 SV=1	[more]
A0A0A0KKV8	1.0e-103	87.02	DUF1990 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G507400 PE=...	[more]
A0A1S3B2T0	1.3e-103	86.47	UPF0548 protein At2g17695 OS=Cucumis melo OX=3656 GN=LOC103485173 PE=4 SV=1	[more]
A0A6J1CKD3	1.4e-100	84.88	UPF0548 protein At2g17695 OS=Momordica charantia OX=3673 GN=LOC111012092 PE=4 SV...	[more]

BLAST of Sed0013381 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17695.1	4.6e-77	60.98	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT2G17695.2	4.6e-77	60.98	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT2G17695.3	4.6e-77	60.98	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018960	Domain of unknown function DUF1990	PFAM	PF09348	DUF1990	coord: 108..254 e-value: 3.2E-40 score: 137.7
None	No IPR available	PANTHER	PTHR34202	UPF0548 PROTEIN	coord: 57..262
None	No IPR available	PANTHER	PTHR34202:SF1	UPF0548 PROTEIN	coord: 57..262

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0013381.1	Sed0013381.1	mRNA