Sed0012877 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTAAACTAGTTTATAACCGAATTATGTCGTGCGCCACTGGGTTCATTTATTCCTAATCAATAGTGATTCTTCAAATCAAATTGAGGAGCTTCCTTGTTTATTTTTGTTCATCATTTTCCCTATTTTTCTGCAAAGCGCTCTACAAAGCCACGAGGAGGAATCGCAGGTGTAAGGTAATCATCGGATCTTTTTCATTTCTAGTGTTTCTGTTTCTAATTTCTTGCTTTTCAATGCGTTGATGGTGGTTTTGGGTTAATCGCATTTACGATTGGATGTGCGCTGAAGCTGAGACGTATAGAAAATTAGGGTTTTATTTGTGGAATGATCGACTTTTAGCTCCCATAATGATTTGCGATGTTAGCTCGCCTCTATTTCGGCGACTGAAAACGAGGAGCAGAGATTAATGAGATAAATCCCTTCATGATAGCATGAGATTGGAGCGGTTGGGCGTGTCAGTTCATTGTTCCTGTTTTTTTTTCAATATCATATATGTTTTTCTGTGTGGATCATGCTTCAATTGTCTACAATTTGTGCCCACTTTTTCAAAGAAACTTCCAAGCCAGACGATGTTTGTTCATAAGGGGATGTTTGGGAGAAGGGGAATGAGAATTAGGGGGAGAATAGGAAAGGGTATGATTATGGGGAGAATGATTAATGTGTTTGGGATTAAGAGAATAATTATGGGGAAAATTATTATTTGTGTTTGGAGTGAAAAGAGTGATTATGAGAAAAATATAGTAATGAGTATAATGAGAGTGAAAAATAGTGATGTGATGTATAAAAATTGTTGTGGGGCAGAATAAAAGGTAGCTAGGGTGAGAATGAAAAAGGTGATTTTGGAAAAGCCCAATTATGGGGGAAATGATCACCGGTGGGCCAAACATGGGAAATCATTGTCATTCCATTCTACACACCCTAAAACTCCTTTCATCTTTTCTATGATCTACAGTTTGATTGATGTGTTGCTTTTTCCATTTGATCCATAGTGTGAAAAGGGTGGAAATGCCATCTTTACAGACTGCTCTTCCTCCTGAGCTTGCCAATAATGTCATTAGGGTTGGTTCCCTCATATCCTATCCTTTTTCAAATACAATTTTCTCCACAAACTTTGTTTAACATTTCATGTTTCGTCACTGCAGCTGTACCGCGAATGCCTTAGAAGAGCTAAGTTTATAGGTTATCAGGTATGGATGTACTCTTCATTTGTTTTTTAAACTAAACAACCGCTGTTATGGTTCTAGTGATCTTGCATTTCAATAACTTAGAGTGGTTAGTGAGTCAATGAGCAGTGGAAAGTTCGAGTTTATTACAGCTTTCAACACATTTAGACACCCTGTTTTTCTTACACATTCTTGCTATGTAAATATTGTAGTTTTTATCTGTTTCAATAAAAAAAATTGTGCCCACATTTCAAATTAGTTGTTTCCAATTATTGGAAGGCTTAAAGCATTAGAGTCGACATAACGTCCATGAGTAGGAGGTCATCATGAGTTCGAATGAGTTCGAGTTCCCCATCTCAATTATTGTTGAACTCAAAAAAATCTACCTTTTACAGCAACATAACACCGATCTTGTTGTGAGTATGGTGAGACAACAATTCAGAAAGAATATGCATGAGACTGATCCAGAGAAGATTCAGAAGATGAAAGATGAGTACGTCTCAAGATTTTGCTTCTTGTTTCTTTCGATCCCTTTTTCCCTGATCTCTTTTGCAGAAGAAAATATATGTTTAAATGAAATATGTACGAGAATCAAGTAAAAAGGCATCCTCTCAGACCCAAAGGATAAAATAGATTAAGTTGTTTTTTTCTTTTTGATATTTGTGATTGTCAAGCCAGCTTGCATACACTTCAACTATTGTCACGTGAAATAGACATACCATCTGACCCTAAACATTTGAATGTCAAAAAAATTGGTAGGAAATTTGGTCATGGATTGAACTCATTTTTTCTTAGTTCCCCAAAAGTGTCTTGACCACTAGGTCACTCCATAGTTTAGATTAAATTATATTTTGTTTTCTGGTTAGAACTTTGTGGGCAAGGCATTCATATTTTTGTGTATACTGCTTGTTTGCAGTGCGGCAAGGGGACTCATAAACCATATTCTACATGAATCTGAGAGAATGTCAGGTCGAAAATTCAGCCAAAGTTCTTGATGTTATTAAGAATGATATCAAGTATAAGGTCTCGCCATTGAAACTTCAGATATTGTAGGGGAATAAGATGGCTGATGATGAAATTACTTCTGGGAGGTTATTTTTGCTTTTCCTTGCATATTTATCTTCAGCAATTGTCTTAAACTATTCCCTTTCTACGATTTGCTCAAGGAAATCATGCATTTTTCAGTTAACTGTTGAACTTCTCCCTATCTAAAATCTGCACTTGATCATGAACAAAGTGGATTTTTTTAGAAAGATATGAGACACATACTTGACCAACTCTTTAAGTCTTTATGGGCTTTTCTTTTAATTCTAGATATTACTTAACCTGAGGATATTCAGGTATGTGAATCATGAGGGCATTTTGATATGGTGCTCATGATGCGGTAATTGTTTTCTTTTAATAAGAAATAATTCGGAC ATTAAACTAGTTTATAACCGAATTATGTCGTGCGCCACTGGGTTCATTTATTCCTAATCAATAGTGATTCTTCAAATCAAATTGAGGAGCTTCCTTGTTTATTTTTGTTCATCATTTTCCCTATTTTTCTGCAAAGCGCTCTACAAAGCCACGAGGAGGAATCGCAGGTGTAAGTGTGAAAAGGGTGGAAATGCCATCTTTACAGACTGCTCTTCCTCCTGAGCTTGCCAATAATGTCATTAGGCTGTACCGCGAATGCCTTAGAAGAGCTAAGTTTATAGGTTATCAGCAACATAACACCGATCTTGTTGTGAGTATGGTGAGACAACAATTCAGAAAGAATATGCATGAGACTGATCCAGAGAAGATTCAGAAGATGAAAGATGATGCGGCAAGGGGACTCATAAACCATATTCTACATGAATCTGAGAGAATGTCAGGTCGAAAATTCAGCCAAAGTTCTTGATGTTATTAAGAATGATATCAAGTATAAGGTCTCGCCATTGAAACTTCAGATATTGTAGGGGAATAAGATGGCTGATGATGAAATTACTTCTGGGAGGTTATTTTTGCTTTTCCTTGCATATTTATCTTCAGCAATTGTCTTAAACTATTCCCTTTCTACGATTTGCTCAAGGAAATCATGCATTTTTCAGTTAACTGTTGAACTTCTCCCTATCTAAAATCTGCACTTGATCATGAACAAAGTGGATTTTTTTAGAAAGATATGAGACACATACTTGACCAACTCTTTAAGTCTTTATGGGCTTTTCTTTTAATTCTAGATATTACTTAACCTGAGGATATTCAGGTATGTGAATCATGAGGGCATTTTGATATGGTGCTCATGATGCGGTAATTGTTTTCTTTTAATAAGAAATAATTCGGAC ATGCCATCTTTACAGACTGCTCTTCCTCCTGAGCTTGCCAATAATGTCATTAGGCTGTACCGCGAATGCCTTAGAAGAGCTAAGTTTATAGGTTATCAGCAACATAACACCGATCTTGTTGTGAGTATGGTGAGACAACAATTCAGAAAGAATATGCATGAGACTGATCCAGAGAAGATTCAGAAGATGAAAGATGATGCGGCAAGGGGACTCATAAACCATATTCTACATGAATCTGAGAGAATGTCAGGTCGAAAATTCAGCCAAAGTTCTTGA MPSLQTALPPELANNVIRLYRECLRRAKFIGYQQHNTDLVVSMVRQQFRKNMHETDPEKIQKMKDDAARGLINHILHESERMSGRKFSQSS Homology
BLAST of Sed0012877 vs. NCBI nr
Match: XP_022138283.1 (uncharacterized protein LOC111009499 [Momordica charantia] >XP_022138284.1 uncharacterized protein LOC111009499 [Momordica charantia]) HSP 1 Score: 173.7 bits (439), Expect = 7.2e-40 Identity = 85/91 (93.41%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of Sed0012877 vs. NCBI nr
Match: XP_038878962.1 (uncharacterized protein LOC120071039 [Benincasa hispida] >XP_038878971.1 uncharacterized protein LOC120071039 [Benincasa hispida]) HSP 1 Score: 170.6 bits (431), Expect = 6.1e-39 Identity = 84/91 (92.31%), Postives = 90/91 (98.90%), Query Frame = 0
BLAST of Sed0012877 vs. NCBI nr
Match: XP_022964695.1 (uncharacterized protein LOC111464671 [Cucurbita moschata]) HSP 1 Score: 170.2 bits (430), Expect = 8.0e-39 Identity = 83/91 (91.21%), Postives = 90/91 (98.90%), Query Frame = 0
BLAST of Sed0012877 vs. NCBI nr
Match: XP_022972196.1 (uncharacterized protein LOC111470803 [Cucurbita maxima] >XP_023540322.1 uncharacterized protein LOC111800735 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 169.1 bits (427), Expect = 1.8e-38 Identity = 82/91 (90.11%), Postives = 90/91 (98.90%), Query Frame = 0
BLAST of Sed0012877 vs. NCBI nr
Match: XP_004147626.1 (uncharacterized protein LOC101203751 [Cucumis sativus] >XP_011651093.1 uncharacterized protein LOC101203751 [Cucumis sativus] >KAE8650410.1 hypothetical protein Csa_010313 [Cucumis sativus]) HSP 1 Score: 167.5 bits (423), Expect = 5.2e-38 Identity = 80/91 (87.91%), Postives = 89/91 (97.80%), Query Frame = 0
BLAST of Sed0012877 vs. ExPASy TrEMBL
Match: A0A6J1C9Q7 (uncharacterized protein LOC111009499 OS=Momordica charantia OX=3673 GN=LOC111009499 PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 3.5e-40 Identity = 85/91 (93.41%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of Sed0012877 vs. ExPASy TrEMBL
Match: A0A6J1HLJ6 (uncharacterized protein LOC111464671 OS=Cucurbita moschata OX=3662 GN=LOC111464671 PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 3.9e-39 Identity = 83/91 (91.21%), Postives = 90/91 (98.90%), Query Frame = 0
BLAST of Sed0012877 vs. ExPASy TrEMBL
Match: A0A6J1I5B4 (uncharacterized protein LOC111470803 OS=Cucurbita maxima OX=3661 GN=LOC111470803 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 8.6e-39 Identity = 82/91 (90.11%), Postives = 90/91 (98.90%), Query Frame = 0
BLAST of Sed0012877 vs. ExPASy TrEMBL
Match: A0A1U8AWB6 (uncharacterized protein LOC104607091 isoform X2 OS=Nelumbo nucifera OX=4432 GN=LOC104607091 PE=4 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 9.5e-38 Identity = 80/91 (87.91%), Postives = 89/91 (97.80%), Query Frame = 0
BLAST of Sed0012877 vs. ExPASy TrEMBL
Match: D7T656 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0020g00430 PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.6e-37 Identity = 79/91 (86.81%), Postives = 89/91 (97.80%), Query Frame = 0
BLAST of Sed0012877 vs. TAIR 10
Match: AT3G17300.1 (unknown protein; Has 48 Blast hits to 48 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). ) HSP 1 Score: 150.2 bits (378), Expect = 8.0e-37 Identity = 73/91 (80.22%), Postives = 84/91 (92.31%), Query Frame = 0
BLAST of Sed0012877 vs. TAIR 10
Match: AT3G17300.2 (unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35 Blast hits to 35 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). ) HSP 1 Score: 89.0 bits (219), Expect = 2.2e-18 Identity = 43/58 (74.14%), Postives = 52/58 (89.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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