Sed0012831 (gene) Chayote v1

Overview
NameSed0012831
Typegene
OrganismSechium edule (Chayote v1)
DescriptionDUF295 domain-containing protein
LocationLG06: 33722421 .. 33723635 (-)
RNA-Seq ExpressionSed0012831
SyntenySed0012831
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTATTTAGTGGTTCGAGATTGGGCCACACTTGAAGCCGATGTGATTGATATGATTCTAAGCCAAATGGTATCTTTGTACGACTATCTCCAATTTAGCCTGGTTTGTAAATCTTGGTATTTCACTGCTTTACGCTTCAAACACCAACGATCCATAATTACTTTTAAGTTTCCTCAACTTCCCATGTTCATGATTCCTAATTCTATTCTTCAAGACCAACATCACTCTCTTTATGATCTTCGAACCAATGATATCAAATATATTTACTTCAAATTTAACTACGATAAAATGTATTGTGGATCATCTTTCTGTTGGTTAATCATGCTTGAAAACTCACTTCATGTTTCCTTATTCAACCCATTTTTTGGATCTCATATCCTTCTTCCTCCCATTAATGTGGTGTCTGATGAACCAAATGTTTATACTTCAAACACCCTTGTTAAAGCCATACTCACCAAAGATCCATCCTTATACCCAAATGATTACACAATTGTAGCTATCTATAGTTTATATCATAAACTTTGTCTCATGAAAGCAAGCGATCAAACTTGGATTTATCAAAACCCTCAAGAGCAGTATTATGATACTGATGTTAATCTCTGTAATGATTATTTATATGCTATAGACCAAAATATGATACTCCGTAAAATTGAAGTTGATGGAAACTTATCTATTTCTTTAATGGCGATCACACCCGAATTGAATCTATTTCAGTAGGATTGTGCATTGTTCCCATTTGAGGAGTCACATTCAGAGTTAGTGTACGTTGTTGAGTCTTCCAAAAGAGAGGTTTTATCGATTAGAAGGTTATTTTCTATAATTTGGAGTGAGCATGAAGATGATCTAGACTCCGATATTTTGTGTTTAAAGACCATCAAAATCTCGGTCTACAAACTTAGTAATGATTGTGATGAAGATGGGATTCAACGAGCTACCGAAGTAGAAAGTTTGGATGGAGATGCTATGTTCATTAGAGACAATCAGTCTATTTGTGTTCCGAGCAAGAAGTTTTCTAATTGTCCACCAAATCGTATATATTATACCGAATATTGTAACTACTATGGTACCCCTCTTATATATGGACTTCAAGATGCAGGAGTATACAGTTTAGAAGATAATTCTTTCGACAAACACTACATAACTCATCCGGCTGATAAAAACTTGCCTCCACCCATATGGATAGTTCCCACCATGCTTCAAAGATTAGATTAA

mRNA sequence

ATGAATTATTTAGTGGTTCGAGATTGGGCCACACTTGAAGCCGATGTGATTGATATGATTCTAAGCCAAATGGTATCTTTGTACGACTATCTCCAATTTAGCCTGGTTTGTAAATCTTGGTATTTCACTGCTTTACGCTTCAAACACCAACGATCCATAATTACTTTTAAGTTTCCTCAACTTCCCATGTTCATGATTCCTAATTCTATTCTTCAAGACCAACATCACTCTCTTTATGATCTTCGAACCAATGATATCAAATATATTTACTTCAAATTTAACTACGATAAAATGTATTGTGGATCATCTTTCTGTTGGTTAATCATGCTTGAAAACTCACTTCATGTTTCCTTATTCAACCCATTTTTTGGATCTCATATCCTTCTTCCTCCCATTAATGTGGTGTCTGATGAACCAAATGTTTATACTTCAAACACCCTTGTTAAAGCCATACTCACCAAAGATCCATCCTTATACCCAAATGATTACACAATTGTAGCTATCTATAGTTTATATCATAAACTTTGTCTCATGAAAGCAAGCGATCAAACTTGGATTTATCAAAACCCTCAAGAGCAGTATTATGATACTGATGTTAATCTCTGTAATGATTATTTATATGCTATAGACCAAAATATGATACTCCGTAAAATTGAAGTTGATGGAAACTTATCTATTTCTTTAATGGCGATCACACCCGAATTGAATCTATTTCAGTTATTTTCTATAATTTGGAGTGAGCATGAAGATGATCTAGACTCCGATATTTTGTGTTTAAAGACCATCAAAATCTCGGTCTACAAACTTAGTAATGATTGTGATGAAGATGGGATTCAACGAGCTACCGAAGTAGAAAGTTTGGATGGAGATGCTATGTTCATTAGAGACAATCAGTCTATTTGTGTTCCGAGCAAGAAGTTTTCTAATTGTCCACCAAATCGTATATATTATACCGAATATTGTAACTACTATGGTACCCCTCTTATATATGGACTTCAAGATGCAGGAGTATACAGTTTAGAAGATAATTCTTTCGACAAACACTACATAACTCATCCGGCTGATAAAAACTTGCCTCCACCCATATGGATAGTTCCCACCATGCTTCAAAGATTAGATTAA

Coding sequence (CDS)

ATGAATTATTTAGTGGTTCGAGATTGGGCCACACTTGAAGCCGATGTGATTGATATGATTCTAAGCCAAATGGTATCTTTGTACGACTATCTCCAATTTAGCCTGGTTTGTAAATCTTGGTATTTCACTGCTTTACGCTTCAAACACCAACGATCCATAATTACTTTTAAGTTTCCTCAACTTCCCATGTTCATGATTCCTAATTCTATTCTTCAAGACCAACATCACTCTCTTTATGATCTTCGAACCAATGATATCAAATATATTTACTTCAAATTTAACTACGATAAAATGTATTGTGGATCATCTTTCTGTTGGTTAATCATGCTTGAAAACTCACTTCATGTTTCCTTATTCAACCCATTTTTTGGATCTCATATCCTTCTTCCTCCCATTAATGTGGTGTCTGATGAACCAAATGTTTATACTTCAAACACCCTTGTTAAAGCCATACTCACCAAAGATCCATCCTTATACCCAAATGATTACACAATTGTAGCTATCTATAGTTTATATCATAAACTTTGTCTCATGAAAGCAAGCGATCAAACTTGGATTTATCAAAACCCTCAAGAGCAGTATTATGATACTGATGTTAATCTCTGTAATGATTATTTATATGCTATAGACCAAAATATGATACTCCGTAAAATTGAAGTTGATGGAAACTTATCTATTTCTTTAATGGCGATCACACCCGAATTGAATCTATTTCAGTTATTTTCTATAATTTGGAGTGAGCATGAAGATGATCTAGACTCCGATATTTTGTGTTTAAAGACCATCAAAATCTCGGTCTACAAACTTAGTAATGATTGTGATGAAGATGGGATTCAACGAGCTACCGAAGTAGAAAGTTTGGATGGAGATGCTATGTTCATTAGAGACAATCAGTCTATTTGTGTTCCGAGCAAGAAGTTTTCTAATTGTCCACCAAATCGTATATATTATACCGAATATTGTAACTACTATGGTACCCCTCTTATATATGGACTTCAAGATGCAGGAGTATACAGTTTAGAAGATAATTCTTTCGACAAACACTACATAACTCATCCGGCTGATAAAAACTTGCCTCCACCCATATGGATAGTTCCCACCATGCTTCAAAGATTAGATTAA

Protein sequence

MNYLVVRDWATLEADVIDMILSQMVSLYDYLQFSLVCKSWYFTALRFKHQRSIITFKFPQLPMFMIPNSILQDQHHSLYDLRTNDIKYIYFKFNYDKMYCGSSFCWLIMLENSLHVSLFNPFFGSHILLPPINVVSDEPNVYTSNTLVKAILTKDPSLYPNDYTIVAIYSLYHKLCLMKASDQTWIYQNPQEQYYDTDVNLCNDYLYAIDQNMILRKIEVDGNLSISLMAITPELNLFQLFSIIWSEHEDDLDSDILCLKTIKISVYKLSNDCDEDGIQRATEVESLDGDAMFIRDNQSICVPSKKFSNCPPNRIYYTEYCNYYGTPLIYGLQDAGVYSLEDNSFDKHYITHPADKNLPPPIWIVPTMLQRLD
Homology
BLAST of Sed0012831 vs. NCBI nr
Match: KGN56200.1 (hypothetical protein Csa_011053 [Cucumis sativus])

HSP 1 Score: 359.0 bits (920), Expect = 5.0e-95
Identity = 186/384 (48.44%), Postives = 260/384 (67.71%), Query Frame = 0

Query: 1   MNYLVVRDWATLEADVIDMILSQMVSLYDYLQFSLVCKSWYFTALRFKHQRSIITFKFPQ 60
           M+ L  RDW+TLE DV+ MIL++MVSLYDYLQFS VCKSW F ALR+KH RS+IT   PQ
Sbjct: 1   MDCLESRDWSTLEYDVLGMILNKMVSLYDYLQFSSVCKSWNFIALRYKHHRSLITSNLPQ 60

Query: 61  LPMFMIPNSILQDQHHSLYDLRTNDIKYIYFKFNYDKMYCGSSFCWLIMLENSLHVSLFN 120
           LPM ++P+     + H LYDL  N+I+ + F  +++K  CGSSF WLIMLE++L ++LFN
Sbjct: 61  LPMLIVPSEYDSGKQHCLYDLINNEIRPVDFVCSFNKRCCGSSFGWLIMLEDTLDITLFN 120

Query: 121 PFFGSHILLPPINVVSDEPNVYTSNTLVKAILTKDPSLYPNDYTIVAIYSLYHKLCLMKA 180
           PF G+ I +PPI  + DEP  Y+   + KAILTKDPS+YP  +TIVAIYS + +LCLM+A
Sbjct: 121 PFNGNVIHIPPI-TIHDEPG-YSPIAIHKAILTKDPSIYPQGFTIVAIYSSFRRLCLMEA 180

Query: 181 SDQTWIYQNPQEQYYDTDVNLCNDYLYAI------------DQNMILRKIEVDGNLS--- 240
            D+ WIY N        DVN+ +D LY +            D ++ L+K+    N +   
Sbjct: 181 KDKRWIYHNLNRNNGFDDVNVVDDILYVLDWRIGLWIVKVEDSSIYLKKVIFSFNFNEAD 240

Query: 241 ISLMAITPELNLFQLFSIIWSEHEDDLDSDIL-CLKTIKISVYKLSNDCDEDGIQRATEV 300
           I+ + ++ +  L  +   + ++ E  + ++IL   +T K  V+K++++C EDGI R  EV
Sbjct: 241 IAYLIVSSKRELLLVSRFVVTQWEGQVPNEILKFTRTSKFIVHKVTHEC-EDGIMRVVEV 300

Query: 301 ESLDGDAMFIRDNQSICVPSKKFSNCPPNRIYYTEYCNYYGTPLIYGLQDAGVYSLEDNS 360
           ESLDGD MFI DNQSICV +K F  C P+RIY+T+ C+++  P ++G QDAG+Y +ED S
Sbjct: 301 ESLDGDVMFIGDNQSICVSTKDFPKCLPDRIYFTDNCHHFAFPYLHGHQDAGIYRVEDKS 360

Query: 361 FDKHYITHPADKNLPPPIWIVPTM 369
           FD+HYI + A +NLPPPIWI+PT+
Sbjct: 361 FDRHYIVNRAHRNLPPPIWIIPTI 381

BLAST of Sed0012831 vs. NCBI nr
Match: KAA0046890.1 (F-box protein SKIP23-like [Cucumis melo var. makuwa])

HSP 1 Score: 357.5 bits (916), Expect = 1.4e-94
Identity = 189/388 (48.71%), Postives = 257/388 (66.24%), Query Frame = 0

Query: 1   MNYLVVRDWATLEADVIDMILSQMVSLYDYLQFSLVCKSWYFTALRFKHQRSIITFKFPQ 60
           M+ L  RDW+TLE DV+ +IL++MVSLYDYLQFS VCKSW F ALR KHQRS+IT    Q
Sbjct: 1   MDCLESRDWSTLEYDVLGVILNKMVSLYDYLQFSRVCKSWNFIALRHKHQRSLITSNHSQ 60

Query: 61  LPMFMIPNSILQDQHHSLYDLRTNDIKYIYFKFNYDKMYCGSSFCWLIMLENSLHVSLFN 120
           LPM ++P+    ++ H LYDL  N+I+ + F  +++K  CGSSF WLI+LE +L ++LFN
Sbjct: 61  LPMLIVPSEYDSEKQHCLYDLTNNEIRPVDFVCSFNKRCCGSSFGWLILLEETLDITLFN 120

Query: 121 PFFGSHILLPPINVVSDEPNVYTSNTLVKAILTKDPSLYPNDYTIVAIYSLYHKLCLMKA 180
           PF G+ I +PPI  + DEP+ Y    + KAILTKDPSLYP+ +TIVAIYS Y +LCLM+A
Sbjct: 121 PFNGNKIHIPPI-TIDDEPD-YCPLAIHKAILTKDPSLYPHGFTIVAIYSSYRRLCLMEA 180

Query: 181 SDQTWIYQNPQEQYYDTDVNLCNDYLYAID------------QNMILRKI-----EVDGN 240
            D+ WIY N        D+N+ +D LY +D             ++ L+K+      V+ +
Sbjct: 181 KDKRWIYHNLNRTNGFDDINVLDDVLYVLDWRIGLWIAKVENSSIYLKKVIFSIDFVEAD 240

Query: 241 LSISLMAITPELNLFQLFSIIWSEHEDDLDSDILCLKTIKISVYKLSNDCDEDGIQRATE 300
           ++  +++   EL L   F I   E +D  D  +L  +T K  VYK++ +C EDG     E
Sbjct: 241 IAYLVVSSKRELLLVSRFVIDEREGQDP-DGIMLFTRTSKFIVYKVTREC-EDGTMSVVE 300

Query: 301 VESLDGDAMFIRDNQSICVPSKKFSNCPPNRIYYTEYCNYYGTPLIYGLQDAGVYSLEDN 360
           VESLDGDAMFI DNQSIC  ++ F  C P+R+Y+T+ C++Y  P ++G QDAG+Y LED 
Sbjct: 301 VESLDGDAMFIGDNQSICASTRDFPKCLPDRVYFTDNCHHYRFPYLHGHQDAGIYRLEDK 360

Query: 361 SFDKHYITHPADKNLPPPIWIVPTMLQR 372
           SFD+HYI   A +NLPPPIWI+PT+  R
Sbjct: 361 SFDRHYIVDSAHRNLPPPIWIIPTICYR 384

BLAST of Sed0012831 vs. NCBI nr
Match: XP_022923266.1 (probable F-box protein At1g65740 [Cucurbita moschata])

HSP 1 Score: 346.7 bits (888), Expect = 2.6e-91
Identity = 191/385 (49.61%), Postives = 256/385 (66.49%), Query Frame = 0

Query: 7   RDWATLEADVIDMILSQMVSLYDYLQFSLVCKSWYFTALRFKHQRSIITFKFPQLPMFMI 66
           RDW  L+ DV+ +IL++MVSLYDYLQFS+VCKSWYF ALR KHQRSIIT KFPQLPM ++
Sbjct: 7   RDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQLPMLIV 66

Query: 67  PNSILQDQHHSLYDLRTNDIKYIYFKFNYDKMYCGSSFCWLIMLENSLHVSLFNPFFGSH 126
           P+    ++ H LYD R N  + + FKF ++K  CGSSF WLIM E +L+++LFNPF G+ 
Sbjct: 67  PSKNGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFNPFSGTV 126

Query: 127 ILLPPINVVSDEPNVYTSNTLVKAILTKDPSLYPNDYTIVAIYSLYHKLCLMKASDQTWI 186
           I LP I  + DEP+ Y  + +VKAILTKDPSLYPNDY +VAIYS Y +LCLM+A+D++W 
Sbjct: 127 ICLPSI-FIDDEPD-YAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRANDKSWT 186

Query: 187 YQNPQEQYYDTDVNLCNDYLYAIDQNMILRKIEV------DGNLSISL------------ 246
           Y  P+      D+N+ +D LYA + NM++ K+EV        ++SISL            
Sbjct: 187 YSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTNDFV 246

Query: 247 MAITPELNLFQLFSIIWSEHEDDLDSDILCLKTIKISVYKLSNDCDEDGIQRATEVESLD 306
           ++   E +  +L  ++ S  E+D       L+T K  VYKL ++C+ D + RA +++SLD
Sbjct: 247 VSYITESSKGELLLVLRSISEEDSQ-----LETTKFKVYKLIDECEND-MLRAVKLKSLD 306

Query: 307 GDAMFIRDNQSICVPSKKFSNCPPNRIYYTE-YCNYYGTPLIYGL-QDAGVYSLEDNSFD 366
           GDAMFI D+QSICV +K F  C PN IY+   Y NY     I  L QD+G+++LED  F 
Sbjct: 307 GDAMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNY-----IPNLEQDSGIFNLEDKRFA 366

Query: 367 KHYITHPADKNLPPPIWIVPTMLQR 372
            HYI  PA KNLP PIWI+PT+  +
Sbjct: 367 NHYIRDPAHKNLPQPIWIIPTICSK 378

BLAST of Sed0012831 vs. NCBI nr
Match: KAG6577578.1 (putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 346.3 bits (887), Expect = 3.3e-91
Identity = 191/385 (49.61%), Postives = 255/385 (66.23%), Query Frame = 0

Query: 7   RDWATLEADVIDMILSQMVSLYDYLQFSLVCKSWYFTALRFKHQRSIITFKFPQLPMFMI 66
           RDW  L+ DV+ +IL++MVSLYDYLQFS+VCKSWYF ALR KHQRSIIT KFPQLPM ++
Sbjct: 7   RDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQLPMLIV 66

Query: 67  PNSILQDQHHSLYDLRTNDIKYIYFKFNYDKMYCGSSFCWLIMLENSLHVSLFNPFFGSH 126
           P+    +  H LYD R N  + + FKF ++K  CGSSF WLIM E +L+++LFNPF G+ 
Sbjct: 67  PSKDGLENQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFNPFSGTV 126

Query: 127 ILLPPINVVSDEPNVYTSNTLVKAILTKDPSLYPNDYTIVAIYSLYHKLCLMKASDQTWI 186
           I LP I  + DEP+ Y  + +VKAILTKDPSLYPNDY +VAIYS Y +LCLM+A+D++W 
Sbjct: 127 ICLPSI-FIDDEPD-YAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRANDKSWT 186

Query: 187 YQNPQEQYYDTDVNLCNDYLYAIDQNMILRKIEV------DGNLSISL------------ 246
           Y  P+      D+N+ +D LYA + NM++ K+EV        ++SISL            
Sbjct: 187 YSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTNDFV 246

Query: 247 MAITPELNLFQLFSIIWSEHEDDLDSDILCLKTIKISVYKLSNDCDEDGIQRATEVESLD 306
           ++   E +  +L  ++ S  E+D       L+T K  VYKL ++C+ D + RA +++SLD
Sbjct: 247 VSYITESSKGELLLVLRSISEEDSQ-----LETTKFKVYKLIDECEND-MLRAVKLKSLD 306

Query: 307 GDAMFIRDNQSICVPSKKFSNCPPNRIYYTE-YCNYYGTPLIYGL-QDAGVYSLEDNSFD 366
           GDAMFI D+QSICV +K F  C PN IY+   Y NY     I  L QD+G+++LED  F 
Sbjct: 307 GDAMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNY-----IPNLEQDSGIFNLEDKRFA 366

Query: 367 KHYITHPADKNLPPPIWIVPTMLQR 372
            HYI  PA KNLP PIWI+PT+  +
Sbjct: 367 NHYIRDPAHKNLPQPIWIIPTICSK 378

BLAST of Sed0012831 vs. NCBI nr
Match: XP_023552957.1 (probable F-box protein At1g65740 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 343.2 bits (879), Expect = 2.8e-90
Identity = 190/385 (49.35%), Postives = 254/385 (65.97%), Query Frame = 0

Query: 7   RDWATLEADVIDMILSQMVSLYDYLQFSLVCKSWYFTALRFKHQRSIITFKFPQLPMFMI 66
           RDW  L+ DV+ +IL++MVSLYDYLQFS+VCKSWYF ALR KHQRSIIT KFPQLPM ++
Sbjct: 7   RDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQLPMLIV 66

Query: 67  PNSILQDQHHSLYDLRTNDIKYIYFKFNYDKMYCGSSFCWLIMLENSLHVSLFNPFFGSH 126
           P+    ++ H LYD R N  + + FKF ++K  CGSSF WLIM E +L ++LFNPF G+ 
Sbjct: 67  PSKDGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPFSGTV 126

Query: 127 ILLPPINVVSDEPNVYTSNTLVKAILTKDPSLYPNDYTIVAIYSLYHKLCLMKASDQTWI 186
           I LP I  + DEP+ Y  + +VKAILTKDP LYPNDY +VAIYS Y +LCLM+A+D++W 
Sbjct: 127 ICLPSI-FIEDEPD-YAPDRIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRANDKSWT 186

Query: 187 YQNPQEQYYDTDVNLCNDYLYAIDQNMILRKIEV------DGNLSISL------------ 246
           Y  P+      D+N+ +D LYA + NM++ K+EV        ++SISL            
Sbjct: 187 YSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTNDFV 246

Query: 247 MAITPELNLFQLFSIIWSEHEDDLDSDILCLKTIKISVYKLSNDCDEDGIQRATEVESLD 306
           ++   E +  +L  ++ S  E+D       L+T K  VYKL ++C+ D + RA +++SLD
Sbjct: 247 VSYITESSKGELLLVLRSISEEDSQ-----LETTKFKVYKLIDECEND-MLRAVKLKSLD 306

Query: 307 GDAMFIRDNQSICVPSKKFSNCPPNRIYYTE-YCNYYGTPLIYGL-QDAGVYSLEDNSFD 366
           GDAMFI D+QSICV +K F  C PN IY+   Y NY     I  L QD+G+++LED  F 
Sbjct: 307 GDAMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNY-----IPNLEQDSGIFNLEDKRFA 366

Query: 367 KHYITHPADKNLPPPIWIVPTMLQR 372
            HYI  PA KNLP PIWI+PT+  +
Sbjct: 367 NHYIRDPAHKNLPQPIWIIPTICSK 378

BLAST of Sed0012831 vs. ExPASy Swiss-Prot
Match: Q6DR20 (F-box protein At2g17036 OS=Arabidopsis thaliana OX=3702 GN=At2g17036 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 4.2e-04
Identity = 61/236 (25.85%), Postives = 98/236 (41.53%), Query Frame = 0

Query: 8   DWATLEADVIDMILSQMVSLYDYLQFSLVCKSWYFTA----LRFKHQRSIITFKFPQLPM 67
           DWATL  D++D+I   + S +D +QF  VC SW   A    L + H        FP    
Sbjct: 3   DWATLPKDLLDLISKCLESSFDLIQFRSVCSSWRSAAGPKRLLWAHNLPF----FPSDDK 62

Query: 68  FMIPNSILQDQHHSLYDLRTNDIKYIYFKFNYDKMYCGSS-FCWLIMLENSLHVS----L 127
             + N IL+  H S+  ++ N+ +            C +  F W++ + ++++VS    L
Sbjct: 63  PFLSNVILRVAHQSILLIKPNEPQ------------CEADLFGWIVKVWDNIYVSRKMTL 122

Query: 128 FNP------FFGSHILLPPINVVSD-------------EPNVY--TSNTLVKAILTKDPS 187
             P      +F  H  LP I  +S               P+ Y    +T ++  L K   
Sbjct: 123 LKPLSSSRNYFPQH--LPRIFDMSKFTVRELCREVKLYHPDYYCVPGHTALELELGKTVV 182

Query: 188 LYPNDYTIVAIYSL-YHKLCLMKASDQTWIYQNPQEQYYDTDVNLCNDYLYAIDQN 213
            Y ND   V +  L Y KL + ++ D+ W   N        D+ + +   +AID N
Sbjct: 183 KYLNDDKFVLLTILEYGKLAVFRSWDREWTVINDYIPSRCQDLIMFDGRFFAIDYN 220

BLAST of Sed0012831 vs. ExPASy TrEMBL
Match: A0A0A0L2J8 (DUF295 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G099610 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 2.4e-95
Identity = 186/384 (48.44%), Postives = 260/384 (67.71%), Query Frame = 0

Query: 1   MNYLVVRDWATLEADVIDMILSQMVSLYDYLQFSLVCKSWYFTALRFKHQRSIITFKFPQ 60
           M+ L  RDW+TLE DV+ MIL++MVSLYDYLQFS VCKSW F ALR+KH RS+IT   PQ
Sbjct: 1   MDCLESRDWSTLEYDVLGMILNKMVSLYDYLQFSSVCKSWNFIALRYKHHRSLITSNLPQ 60

Query: 61  LPMFMIPNSILQDQHHSLYDLRTNDIKYIYFKFNYDKMYCGSSFCWLIMLENSLHVSLFN 120
           LPM ++P+     + H LYDL  N+I+ + F  +++K  CGSSF WLIMLE++L ++LFN
Sbjct: 61  LPMLIVPSEYDSGKQHCLYDLINNEIRPVDFVCSFNKRCCGSSFGWLIMLEDTLDITLFN 120

Query: 121 PFFGSHILLPPINVVSDEPNVYTSNTLVKAILTKDPSLYPNDYTIVAIYSLYHKLCLMKA 180
           PF G+ I +PPI  + DEP  Y+   + KAILTKDPS+YP  +TIVAIYS + +LCLM+A
Sbjct: 121 PFNGNVIHIPPI-TIHDEPG-YSPIAIHKAILTKDPSIYPQGFTIVAIYSSFRRLCLMEA 180

Query: 181 SDQTWIYQNPQEQYYDTDVNLCNDYLYAI------------DQNMILRKIEVDGNLS--- 240
            D+ WIY N        DVN+ +D LY +            D ++ L+K+    N +   
Sbjct: 181 KDKRWIYHNLNRNNGFDDVNVVDDILYVLDWRIGLWIVKVEDSSIYLKKVIFSFNFNEAD 240

Query: 241 ISLMAITPELNLFQLFSIIWSEHEDDLDSDIL-CLKTIKISVYKLSNDCDEDGIQRATEV 300
           I+ + ++ +  L  +   + ++ E  + ++IL   +T K  V+K++++C EDGI R  EV
Sbjct: 241 IAYLIVSSKRELLLVSRFVVTQWEGQVPNEILKFTRTSKFIVHKVTHEC-EDGIMRVVEV 300

Query: 301 ESLDGDAMFIRDNQSICVPSKKFSNCPPNRIYYTEYCNYYGTPLIYGLQDAGVYSLEDNS 360
           ESLDGD MFI DNQSICV +K F  C P+RIY+T+ C+++  P ++G QDAG+Y +ED S
Sbjct: 301 ESLDGDVMFIGDNQSICVSTKDFPKCLPDRIYFTDNCHHFAFPYLHGHQDAGIYRVEDKS 360

Query: 361 FDKHYITHPADKNLPPPIWIVPTM 369
           FD+HYI + A +NLPPPIWI+PT+
Sbjct: 361 FDRHYIVNRAHRNLPPPIWIIPTI 381

BLAST of Sed0012831 vs. ExPASy TrEMBL
Match: A0A5A7TUR9 (F-box protein SKIP23-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G00500 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 7.0e-95
Identity = 189/388 (48.71%), Postives = 257/388 (66.24%), Query Frame = 0

Query: 1   MNYLVVRDWATLEADVIDMILSQMVSLYDYLQFSLVCKSWYFTALRFKHQRSIITFKFPQ 60
           M+ L  RDW+TLE DV+ +IL++MVSLYDYLQFS VCKSW F ALR KHQRS+IT    Q
Sbjct: 1   MDCLESRDWSTLEYDVLGVILNKMVSLYDYLQFSRVCKSWNFIALRHKHQRSLITSNHSQ 60

Query: 61  LPMFMIPNSILQDQHHSLYDLRTNDIKYIYFKFNYDKMYCGSSFCWLIMLENSLHVSLFN 120
           LPM ++P+    ++ H LYDL  N+I+ + F  +++K  CGSSF WLI+LE +L ++LFN
Sbjct: 61  LPMLIVPSEYDSEKQHCLYDLTNNEIRPVDFVCSFNKRCCGSSFGWLILLEETLDITLFN 120

Query: 121 PFFGSHILLPPINVVSDEPNVYTSNTLVKAILTKDPSLYPNDYTIVAIYSLYHKLCLMKA 180
           PF G+ I +PPI  + DEP+ Y    + KAILTKDPSLYP+ +TIVAIYS Y +LCLM+A
Sbjct: 121 PFNGNKIHIPPI-TIDDEPD-YCPLAIHKAILTKDPSLYPHGFTIVAIYSSYRRLCLMEA 180

Query: 181 SDQTWIYQNPQEQYYDTDVNLCNDYLYAID------------QNMILRKI-----EVDGN 240
            D+ WIY N        D+N+ +D LY +D             ++ L+K+      V+ +
Sbjct: 181 KDKRWIYHNLNRTNGFDDINVLDDVLYVLDWRIGLWIAKVENSSIYLKKVIFSIDFVEAD 240

Query: 241 LSISLMAITPELNLFQLFSIIWSEHEDDLDSDILCLKTIKISVYKLSNDCDEDGIQRATE 300
           ++  +++   EL L   F I   E +D  D  +L  +T K  VYK++ +C EDG     E
Sbjct: 241 IAYLVVSSKRELLLVSRFVIDEREGQDP-DGIMLFTRTSKFIVYKVTREC-EDGTMSVVE 300

Query: 301 VESLDGDAMFIRDNQSICVPSKKFSNCPPNRIYYTEYCNYYGTPLIYGLQDAGVYSLEDN 360
           VESLDGDAMFI DNQSIC  ++ F  C P+R+Y+T+ C++Y  P ++G QDAG+Y LED 
Sbjct: 301 VESLDGDAMFIGDNQSICASTRDFPKCLPDRVYFTDNCHHYRFPYLHGHQDAGIYRLEDK 360

Query: 361 SFDKHYITHPADKNLPPPIWIVPTMLQR 372
           SFD+HYI   A +NLPPPIWI+PT+  R
Sbjct: 361 SFDRHYIVDSAHRNLPPPIWIIPTICYR 384

BLAST of Sed0012831 vs. ExPASy TrEMBL
Match: A0A6J1E6C7 (probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431011 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 1.2e-91
Identity = 191/385 (49.61%), Postives = 256/385 (66.49%), Query Frame = 0

Query: 7   RDWATLEADVIDMILSQMVSLYDYLQFSLVCKSWYFTALRFKHQRSIITFKFPQLPMFMI 66
           RDW  L+ DV+ +IL++MVSLYDYLQFS+VCKSWYF ALR KHQRSIIT KFPQLPM ++
Sbjct: 7   RDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQLPMLIV 66

Query: 67  PNSILQDQHHSLYDLRTNDIKYIYFKFNYDKMYCGSSFCWLIMLENSLHVSLFNPFFGSH 126
           P+    ++ H LYD R N  + + FKF ++K  CGSSF WLIM E +L+++LFNPF G+ 
Sbjct: 67  PSKNGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFNPFSGTV 126

Query: 127 ILLPPINVVSDEPNVYTSNTLVKAILTKDPSLYPNDYTIVAIYSLYHKLCLMKASDQTWI 186
           I LP I  + DEP+ Y  + +VKAILTKDPSLYPNDY +VAIYS Y +LCLM+A+D++W 
Sbjct: 127 ICLPSI-FIDDEPD-YAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRANDKSWT 186

Query: 187 YQNPQEQYYDTDVNLCNDYLYAIDQNMILRKIEV------DGNLSISL------------ 246
           Y  P+      D+N+ +D LYA + NM++ K+EV        ++SISL            
Sbjct: 187 YSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTNDFV 246

Query: 247 MAITPELNLFQLFSIIWSEHEDDLDSDILCLKTIKISVYKLSNDCDEDGIQRATEVESLD 306
           ++   E +  +L  ++ S  E+D       L+T K  VYKL ++C+ D + RA +++SLD
Sbjct: 247 VSYITESSKGELLLVLRSISEEDSQ-----LETTKFKVYKLIDECEND-MLRAVKLKSLD 306

Query: 307 GDAMFIRDNQSICVPSKKFSNCPPNRIYYTE-YCNYYGTPLIYGL-QDAGVYSLEDNSFD 366
           GDAMFI D+QSICV +K F  C PN IY+   Y NY     I  L QD+G+++LED  F 
Sbjct: 307 GDAMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNY-----IPNLEQDSGIFNLEDKRFA 366

Query: 367 KHYITHPADKNLPPPIWIVPTMLQR 372
            HYI  PA KNLP PIWI+PT+  +
Sbjct: 367 NHYIRDPAHKNLPQPIWIIPTICSK 378

BLAST of Sed0012831 vs. ExPASy TrEMBL
Match: A0A6J1E5P5 (probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431012 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 1.1e-87
Identity = 180/380 (47.37%), Postives = 246/380 (64.74%), Query Frame = 0

Query: 7   RDWATLEADVIDMILSQMVSLYDYLQFSLVCKSWYFTALRFKHQRSIITFKFPQLPMFMI 66
           RDW  L+ DV+ +IL++MVSLYDYLQFSLVCKSWYF AL  KHQRSII  K PQLPM ++
Sbjct: 7   RDWTALDYDVLGVILNKMVSLYDYLQFSLVCKSWYFLALHHKHQRSIIASKVPQLPMLIV 66

Query: 67  PNSILQDQHHSLYDLRTNDIKYIYFKFNYDKMYCGSSFCWLIMLENSLHVSLFNPFFGSH 126
           P+    ++ H LYDL TN ++ + FKF ++K  CGSSF WLIM + +L + LFNPF G+ 
Sbjct: 67  PSKDGLEKQHCLYDLTTNIVRSVDFKFCFNKRCCGSSFGWLIMRDETLGIVLFNPFSGAV 126

Query: 127 ILLPPINVVSDEPNVYTSNTLVKAILTKDPSLYPNDYTIVAIYSLYHKLCLMKASDQTWI 186
           I LPP+    D    +    ++KAILTKDPSLYPNDY +V I+  Y +LCL++A+D+TW 
Sbjct: 127 IYLPPVATYDDIE--WIPGHIIKAILTKDPSLYPNDYMVVGIFGTYKRLCLIRANDKTWT 186

Query: 187 YQNPQEQYYDTDVNLCNDYLYAIDQNMILRKIEV----DGNLSISL---MAITPELNLFQ 246
           Y  P       D+N+C D +YA + ++ + K+EV    D + SIS+   M  T  +    
Sbjct: 187 YYYPTPNIPFNDINICRDTIYATENDLDVWKVEVQNSEDESSSISISVKMVHTKRIRYIG 246

Query: 247 LFSIIWSEHEDDL------DSDILCLKTIKISVYKLSNDCDEDGIQRATEVESLDGDAMF 306
              I  S   + L      +S     +T+   VYKL ++ +ED ++RA EV+SLDGDA+F
Sbjct: 247 TAYITESSKGELLVVLRIFNSGEEQFETVDFEVYKLIHE-NEDELRRAVEVKSLDGDAIF 306

Query: 307 IRDNQSICVPSKKFSNCPPNRIYYTE--YCNYYGTPLIYGLQDAGVYSLEDNSFDKHYIT 366
           I D+QSICV +K+F+ C PNRIY+T+  Y N      + G QD GV++ ED SF+ HYI 
Sbjct: 307 IGDSQSICVSTKEFAGCLPNRIYFTDNRYVNLV-VGKLDGTQDLGVFNFEDGSFEDHYIA 366

Query: 367 HPADKNLPPPIWIVPTMLQR 372
            PA KNLP P+WI+PT+  +
Sbjct: 367 DPAQKNLPSPMWIIPTICSK 382

BLAST of Sed0012831 vs. ExPASy TrEMBL
Match: A0A6J1E923 (probable F-box protein At4g22165 OS=Cucurbita moschata OX=3662 GN=LOC111431007 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 2.3e-85
Identity = 172/380 (45.26%), Postives = 245/380 (64.47%), Query Frame = 0

Query: 7   RDWATLEADVIDMILSQMVSLYDYLQFSLVCKSWYFTALRFKHQRSIITFKFPQLPMFMI 66
           RDW  L+ DV+ +IL++MVSLYDYLQF+LVCKSWYF ALR KH+RSIIT K  QLPM ++
Sbjct: 7   RDWTALDYDVLGVILNKMVSLYDYLQFNLVCKSWYFLALRHKHERSIITSKVTQLPMLIV 66

Query: 67  PNSILQDQHHSLYDLRTNDIKYIYFKFNYDKMYCGSSFCWLIMLENSLHVSLFNPFFGSH 126
           P+    ++ H LYDL  N ++ + FKF ++K  CGSSF WLIM + +L + LFNPF G+ 
Sbjct: 67  PSKDGLEKQHCLYDLTRNVVRPVDFKFCFNKRCCGSSFGWLIMRDETLGIVLFNPFSGTV 126

Query: 127 ILLPPINVVSDEPNVYTSNTLVKAILTKDPSLYPNDYTIVAIYSLYHKLCLMKASDQTWI 186
           I LPP+    D    +    ++KAILTKDPSLYPNDY +VAI+  Y +LCL++A+D+TW 
Sbjct: 127 IYLPPVATYDDIE--WIPGHIIKAILTKDPSLYPNDYMVVAIFGTYKRLCLIRANDKTWT 186

Query: 187 YQNPQEQYYDTDVNLCNDYLYAIDQNMILRKIEVDG--NLSISLMAITPELNLFQLFSII 246
           Y  P       D+N+C D LYA +  + + K+EV+   + S S+      ++  ++  ++
Sbjct: 187 YYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEMGHLV 246

Query: 247 WSEHEDDLDSDILCL-----------KTIKISVYKLSNDCDEDGIQRATEVESLDGDAMF 306
            S   +    ++L +           +T+   VYKL ++ +ED ++RA EV+SLDGDA+F
Sbjct: 247 TSYITESSKGELLVVLRILDSGEEQFETVDFEVYKLIHE-NEDEMRRAVEVKSLDGDAIF 306

Query: 307 IRDNQSICVPSKKFSNCPPNRIYYTE--YCNYYGTPLIYGLQDAGVYSLEDNSFDKHYIT 366
           I D+QSICV +K+F  C PNRIY+T+  Y N      + G QD G ++ E+ SF+  YI 
Sbjct: 307 IGDSQSICVSTKEFPGCLPNRIYFTDNRYVNLV-VGKLDGTQDLGTFNFENGSFEDQYIA 366

Query: 367 HPADKNLPPPIWIVPTMLQR 372
            PA KNLP PIWI+PT+  +
Sbjct: 367 DPAQKNLPSPIWIIPTICSK 382

BLAST of Sed0012831 vs. TAIR 10
Match: AT2G17036.1 (F-box family protein with a domain of unknown function (DUF295) )

HSP 1 Score: 47.4 bits (111), Expect = 3.0e-05
Identity = 61/236 (25.85%), Postives = 98/236 (41.53%), Query Frame = 0

Query: 8   DWATLEADVIDMILSQMVSLYDYLQFSLVCKSWYFTA----LRFKHQRSIITFKFPQLPM 67
           DWATL  D++D+I   + S +D +QF  VC SW   A    L + H        FP    
Sbjct: 2   DWATLPKDLLDLISKCLESSFDLIQFRSVCSSWRSAAGPKRLLWAHNLPF----FPSDDK 61

Query: 68  FMIPNSILQDQHHSLYDLRTNDIKYIYFKFNYDKMYCGSS-FCWLIMLENSLHVS----L 127
             + N IL+  H S+  ++ N+ +            C +  F W++ + ++++VS    L
Sbjct: 62  PFLSNVILRVAHQSILLIKPNEPQ------------CEADLFGWIVKVWDNIYVSRKMTL 121

Query: 128 FNP------FFGSHILLPPINVVSD-------------EPNVY--TSNTLVKAILTKDPS 187
             P      +F  H  LP I  +S               P+ Y    +T ++  L K   
Sbjct: 122 LKPLSSSRNYFPQH--LPRIFDMSKFTVRELCREVKLYHPDYYCVPGHTALELELGKTVV 181

Query: 188 LYPNDYTIVAIYSL-YHKLCLMKASDQTWIYQNPQEQYYDTDVNLCNDYLYAIDQN 213
            Y ND   V +  L Y KL + ++ D+ W   N        D+ + +   +AID N
Sbjct: 182 KYLNDDKFVLLTILEYGKLAVFRSWDREWTVINDYIPSRCQDLIMFDGRFFAIDYN 219

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN56200.15.0e-9548.44hypothetical protein Csa_011053 [Cucumis sativus][more]
KAA0046890.11.4e-9448.71F-box protein SKIP23-like [Cucumis melo var. makuwa][more]
XP_022923266.12.6e-9149.61probable F-box protein At1g65740 [Cucurbita moschata][more]
KAG6577578.13.3e-9149.61putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023552957.12.8e-9049.35probable F-box protein At1g65740 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q6DR204.2e-0425.85F-box protein At2g17036 OS=Arabidopsis thaliana OX=3702 GN=At2g17036 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0L2J82.4e-9548.44DUF295 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G099610 PE=4... [more]
A0A5A7TUR97.0e-9548.71F-box protein SKIP23-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo... [more]
A0A6J1E6C71.2e-9149.61probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431011 P... [more]
A0A6J1E5P51.1e-8747.37probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431012 P... [more]
A0A6J1E9232.3e-8545.26probable F-box protein At4g22165 OS=Cucurbita moschata OX=3662 GN=LOC111431007 P... [more]
Match NameE-valueIdentityDescription
AT2G17036.13.0e-0525.85F-box family protein with a domain of unknown function (DUF295) [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005174Domain unknown function DUF295PFAMPF03478DUF295coord: 283..340
e-value: 1.9E-11
score: 43.4
NoneNo IPR availablePANTHERPTHR44259OS07G0183000 PROTEIN-RELATEDcoord: 7..366
NoneNo IPR availablePANTHERPTHR44259:SF18UBIQUITIN-PROTEIN LIGASEcoord: 7..366
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 13..100

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0012831.1Sed0012831.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding