Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTATTTAGTGGTTCGAGATTGGGCCACACTTGAAGCCGATGTGATTGATATGATTCTAAGCCAAATGGTATCTTTGTACGACTATCTCCAATTTAGCCTGGTTTGTAAATCTTGGTATTTCACTGCTTTACGCTTCAAACACCAACGATCCATAATTACTTTTAAGTTTCCTCAACTTCCCATGTTCATGATTCCTAATTCTATTCTTCAAGACCAACATCACTCTCTTTATGATCTTCGAACCAATGATATCAAATATATTTACTTCAAATTTAACTACGATAAAATGTATTGTGGATCATCTTTCTGTTGGTTAATCATGCTTGAAAACTCACTTCATGTTTCCTTATTCAACCCATTTTTTGGATCTCATATCCTTCTTCCTCCCATTAATGTGGTGTCTGATGAACCAAATGTTTATACTTCAAACACCCTTGTTAAAGCCATACTCACCAAAGATCCATCCTTATACCCAAATGATTACACAATTGTAGCTATCTATAGTTTATATCATAAACTTTGTCTCATGAAAGCAAGCGATCAAACTTGGATTTATCAAAACCCTCAAGAGCAGTATTATGATACTGATGTTAATCTCTGTAATGATTATTTATATGCTATAGACCAAAATATGATACTCCGTAAAATTGAAGTTGATGGAAACTTATCTATTTCTTTAATGGCGATCACACCCGAATTGAATCTATTTCAGTAGGATTGTGCATTGTTCCCATTTGAGGAGTCACATTCAGAGTTAGTGTACGTTGTTGAGTCTTCCAAAAGAGAGGTTTTATCGATTAGAAGGTTATTTTCTATAATTTGGAGTGAGCATGAAGATGATCTAGACTCCGATATTTTGTGTTTAAAGACCATCAAAATCTCGGTCTACAAACTTAGTAATGATTGTGATGAAGATGGGATTCAACGAGCTACCGAAGTAGAAAGTTTGGATGGAGATGCTATGTTCATTAGAGACAATCAGTCTATTTGTGTTCCGAGCAAGAAGTTTTCTAATTGTCCACCAAATCGTATATATTATACCGAATATTGTAACTACTATGGTACCCCTCTTATATATGGACTTCAAGATGCAGGAGTATACAGTTTAGAAGATAATTCTTTCGACAAACACTACATAACTCATCCGGCTGATAAAAACTTGCCTCCACCCATATGGATAGTTCCCACCATGCTTCAAAGATTAGATTAA
mRNA sequence
ATGAATTATTTAGTGGTTCGAGATTGGGCCACACTTGAAGCCGATGTGATTGATATGATTCTAAGCCAAATGGTATCTTTGTACGACTATCTCCAATTTAGCCTGGTTTGTAAATCTTGGTATTTCACTGCTTTACGCTTCAAACACCAACGATCCATAATTACTTTTAAGTTTCCTCAACTTCCCATGTTCATGATTCCTAATTCTATTCTTCAAGACCAACATCACTCTCTTTATGATCTTCGAACCAATGATATCAAATATATTTACTTCAAATTTAACTACGATAAAATGTATTGTGGATCATCTTTCTGTTGGTTAATCATGCTTGAAAACTCACTTCATGTTTCCTTATTCAACCCATTTTTTGGATCTCATATCCTTCTTCCTCCCATTAATGTGGTGTCTGATGAACCAAATGTTTATACTTCAAACACCCTTGTTAAAGCCATACTCACCAAAGATCCATCCTTATACCCAAATGATTACACAATTGTAGCTATCTATAGTTTATATCATAAACTTTGTCTCATGAAAGCAAGCGATCAAACTTGGATTTATCAAAACCCTCAAGAGCAGTATTATGATACTGATGTTAATCTCTGTAATGATTATTTATATGCTATAGACCAAAATATGATACTCCGTAAAATTGAAGTTGATGGAAACTTATCTATTTCTTTAATGGCGATCACACCCGAATTGAATCTATTTCAGTTATTTTCTATAATTTGGAGTGAGCATGAAGATGATCTAGACTCCGATATTTTGTGTTTAAAGACCATCAAAATCTCGGTCTACAAACTTAGTAATGATTGTGATGAAGATGGGATTCAACGAGCTACCGAAGTAGAAAGTTTGGATGGAGATGCTATGTTCATTAGAGACAATCAGTCTATTTGTGTTCCGAGCAAGAAGTTTTCTAATTGTCCACCAAATCGTATATATTATACCGAATATTGTAACTACTATGGTACCCCTCTTATATATGGACTTCAAGATGCAGGAGTATACAGTTTAGAAGATAATTCTTTCGACAAACACTACATAACTCATCCGGCTGATAAAAACTTGCCTCCACCCATATGGATAGTTCCCACCATGCTTCAAAGATTAGATTAA
Coding sequence (CDS)
ATGAATTATTTAGTGGTTCGAGATTGGGCCACACTTGAAGCCGATGTGATTGATATGATTCTAAGCCAAATGGTATCTTTGTACGACTATCTCCAATTTAGCCTGGTTTGTAAATCTTGGTATTTCACTGCTTTACGCTTCAAACACCAACGATCCATAATTACTTTTAAGTTTCCTCAACTTCCCATGTTCATGATTCCTAATTCTATTCTTCAAGACCAACATCACTCTCTTTATGATCTTCGAACCAATGATATCAAATATATTTACTTCAAATTTAACTACGATAAAATGTATTGTGGATCATCTTTCTGTTGGTTAATCATGCTTGAAAACTCACTTCATGTTTCCTTATTCAACCCATTTTTTGGATCTCATATCCTTCTTCCTCCCATTAATGTGGTGTCTGATGAACCAAATGTTTATACTTCAAACACCCTTGTTAAAGCCATACTCACCAAAGATCCATCCTTATACCCAAATGATTACACAATTGTAGCTATCTATAGTTTATATCATAAACTTTGTCTCATGAAAGCAAGCGATCAAACTTGGATTTATCAAAACCCTCAAGAGCAGTATTATGATACTGATGTTAATCTCTGTAATGATTATTTATATGCTATAGACCAAAATATGATACTCCGTAAAATTGAAGTTGATGGAAACTTATCTATTTCTTTAATGGCGATCACACCCGAATTGAATCTATTTCAGTTATTTTCTATAATTTGGAGTGAGCATGAAGATGATCTAGACTCCGATATTTTGTGTTTAAAGACCATCAAAATCTCGGTCTACAAACTTAGTAATGATTGTGATGAAGATGGGATTCAACGAGCTACCGAAGTAGAAAGTTTGGATGGAGATGCTATGTTCATTAGAGACAATCAGTCTATTTGTGTTCCGAGCAAGAAGTTTTCTAATTGTCCACCAAATCGTATATATTATACCGAATATTGTAACTACTATGGTACCCCTCTTATATATGGACTTCAAGATGCAGGAGTATACAGTTTAGAAGATAATTCTTTCGACAAACACTACATAACTCATCCGGCTGATAAAAACTTGCCTCCACCCATATGGATAGTTCCCACCATGCTTCAAAGATTAGATTAA
Protein sequence
MNYLVVRDWATLEADVIDMILSQMVSLYDYLQFSLVCKSWYFTALRFKHQRSIITFKFPQLPMFMIPNSILQDQHHSLYDLRTNDIKYIYFKFNYDKMYCGSSFCWLIMLENSLHVSLFNPFFGSHILLPPINVVSDEPNVYTSNTLVKAILTKDPSLYPNDYTIVAIYSLYHKLCLMKASDQTWIYQNPQEQYYDTDVNLCNDYLYAIDQNMILRKIEVDGNLSISLMAITPELNLFQLFSIIWSEHEDDLDSDILCLKTIKISVYKLSNDCDEDGIQRATEVESLDGDAMFIRDNQSICVPSKKFSNCPPNRIYYTEYCNYYGTPLIYGLQDAGVYSLEDNSFDKHYITHPADKNLPPPIWIVPTMLQRLD
Homology
BLAST of Sed0012831 vs. NCBI nr
Match:
KGN56200.1 (hypothetical protein Csa_011053 [Cucumis sativus])
HSP 1 Score: 359.0 bits (920), Expect = 5.0e-95
Identity = 186/384 (48.44%), Postives = 260/384 (67.71%), Query Frame = 0
Query: 1 MNYLVVRDWATLEADVIDMILSQMVSLYDYLQFSLVCKSWYFTALRFKHQRSIITFKFPQ 60
M+ L RDW+TLE DV+ MIL++MVSLYDYLQFS VCKSW F ALR+KH RS+IT PQ
Sbjct: 1 MDCLESRDWSTLEYDVLGMILNKMVSLYDYLQFSSVCKSWNFIALRYKHHRSLITSNLPQ 60
Query: 61 LPMFMIPNSILQDQHHSLYDLRTNDIKYIYFKFNYDKMYCGSSFCWLIMLENSLHVSLFN 120
LPM ++P+ + H LYDL N+I+ + F +++K CGSSF WLIMLE++L ++LFN
Sbjct: 61 LPMLIVPSEYDSGKQHCLYDLINNEIRPVDFVCSFNKRCCGSSFGWLIMLEDTLDITLFN 120
Query: 121 PFFGSHILLPPINVVSDEPNVYTSNTLVKAILTKDPSLYPNDYTIVAIYSLYHKLCLMKA 180
PF G+ I +PPI + DEP Y+ + KAILTKDPS+YP +TIVAIYS + +LCLM+A
Sbjct: 121 PFNGNVIHIPPI-TIHDEPG-YSPIAIHKAILTKDPSIYPQGFTIVAIYSSFRRLCLMEA 180
Query: 181 SDQTWIYQNPQEQYYDTDVNLCNDYLYAI------------DQNMILRKIEVDGNLS--- 240
D+ WIY N DVN+ +D LY + D ++ L+K+ N +
Sbjct: 181 KDKRWIYHNLNRNNGFDDVNVVDDILYVLDWRIGLWIVKVEDSSIYLKKVIFSFNFNEAD 240
Query: 241 ISLMAITPELNLFQLFSIIWSEHEDDLDSDIL-CLKTIKISVYKLSNDCDEDGIQRATEV 300
I+ + ++ + L + + ++ E + ++IL +T K V+K++++C EDGI R EV
Sbjct: 241 IAYLIVSSKRELLLVSRFVVTQWEGQVPNEILKFTRTSKFIVHKVTHEC-EDGIMRVVEV 300
Query: 301 ESLDGDAMFIRDNQSICVPSKKFSNCPPNRIYYTEYCNYYGTPLIYGLQDAGVYSLEDNS 360
ESLDGD MFI DNQSICV +K F C P+RIY+T+ C+++ P ++G QDAG+Y +ED S
Sbjct: 301 ESLDGDVMFIGDNQSICVSTKDFPKCLPDRIYFTDNCHHFAFPYLHGHQDAGIYRVEDKS 360
Query: 361 FDKHYITHPADKNLPPPIWIVPTM 369
FD+HYI + A +NLPPPIWI+PT+
Sbjct: 361 FDRHYIVNRAHRNLPPPIWIIPTI 381
BLAST of Sed0012831 vs. NCBI nr
Match:
KAA0046890.1 (F-box protein SKIP23-like [Cucumis melo var. makuwa])
HSP 1 Score: 357.5 bits (916), Expect = 1.4e-94
Identity = 189/388 (48.71%), Postives = 257/388 (66.24%), Query Frame = 0
Query: 1 MNYLVVRDWATLEADVIDMILSQMVSLYDYLQFSLVCKSWYFTALRFKHQRSIITFKFPQ 60
M+ L RDW+TLE DV+ +IL++MVSLYDYLQFS VCKSW F ALR KHQRS+IT Q
Sbjct: 1 MDCLESRDWSTLEYDVLGVILNKMVSLYDYLQFSRVCKSWNFIALRHKHQRSLITSNHSQ 60
Query: 61 LPMFMIPNSILQDQHHSLYDLRTNDIKYIYFKFNYDKMYCGSSFCWLIMLENSLHVSLFN 120
LPM ++P+ ++ H LYDL N+I+ + F +++K CGSSF WLI+LE +L ++LFN
Sbjct: 61 LPMLIVPSEYDSEKQHCLYDLTNNEIRPVDFVCSFNKRCCGSSFGWLILLEETLDITLFN 120
Query: 121 PFFGSHILLPPINVVSDEPNVYTSNTLVKAILTKDPSLYPNDYTIVAIYSLYHKLCLMKA 180
PF G+ I +PPI + DEP+ Y + KAILTKDPSLYP+ +TIVAIYS Y +LCLM+A
Sbjct: 121 PFNGNKIHIPPI-TIDDEPD-YCPLAIHKAILTKDPSLYPHGFTIVAIYSSYRRLCLMEA 180
Query: 181 SDQTWIYQNPQEQYYDTDVNLCNDYLYAID------------QNMILRKI-----EVDGN 240
D+ WIY N D+N+ +D LY +D ++ L+K+ V+ +
Sbjct: 181 KDKRWIYHNLNRTNGFDDINVLDDVLYVLDWRIGLWIAKVENSSIYLKKVIFSIDFVEAD 240
Query: 241 LSISLMAITPELNLFQLFSIIWSEHEDDLDSDILCLKTIKISVYKLSNDCDEDGIQRATE 300
++ +++ EL L F I E +D D +L +T K VYK++ +C EDG E
Sbjct: 241 IAYLVVSSKRELLLVSRFVIDEREGQDP-DGIMLFTRTSKFIVYKVTREC-EDGTMSVVE 300
Query: 301 VESLDGDAMFIRDNQSICVPSKKFSNCPPNRIYYTEYCNYYGTPLIYGLQDAGVYSLEDN 360
VESLDGDAMFI DNQSIC ++ F C P+R+Y+T+ C++Y P ++G QDAG+Y LED
Sbjct: 301 VESLDGDAMFIGDNQSICASTRDFPKCLPDRVYFTDNCHHYRFPYLHGHQDAGIYRLEDK 360
Query: 361 SFDKHYITHPADKNLPPPIWIVPTMLQR 372
SFD+HYI A +NLPPPIWI+PT+ R
Sbjct: 361 SFDRHYIVDSAHRNLPPPIWIIPTICYR 384
BLAST of Sed0012831 vs. NCBI nr
Match:
XP_022923266.1 (probable F-box protein At1g65740 [Cucurbita moschata])
HSP 1 Score: 346.7 bits (888), Expect = 2.6e-91
Identity = 191/385 (49.61%), Postives = 256/385 (66.49%), Query Frame = 0
Query: 7 RDWATLEADVIDMILSQMVSLYDYLQFSLVCKSWYFTALRFKHQRSIITFKFPQLPMFMI 66
RDW L+ DV+ +IL++MVSLYDYLQFS+VCKSWYF ALR KHQRSIIT KFPQLPM ++
Sbjct: 7 RDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQLPMLIV 66
Query: 67 PNSILQDQHHSLYDLRTNDIKYIYFKFNYDKMYCGSSFCWLIMLENSLHVSLFNPFFGSH 126
P+ ++ H LYD R N + + FKF ++K CGSSF WLIM E +L+++LFNPF G+
Sbjct: 67 PSKNGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFNPFSGTV 126
Query: 127 ILLPPINVVSDEPNVYTSNTLVKAILTKDPSLYPNDYTIVAIYSLYHKLCLMKASDQTWI 186
I LP I + DEP+ Y + +VKAILTKDPSLYPNDY +VAIYS Y +LCLM+A+D++W
Sbjct: 127 ICLPSI-FIDDEPD-YAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRANDKSWT 186
Query: 187 YQNPQEQYYDTDVNLCNDYLYAIDQNMILRKIEV------DGNLSISL------------ 246
Y P+ D+N+ +D LYA + NM++ K+EV ++SISL
Sbjct: 187 YSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTNDFV 246
Query: 247 MAITPELNLFQLFSIIWSEHEDDLDSDILCLKTIKISVYKLSNDCDEDGIQRATEVESLD 306
++ E + +L ++ S E+D L+T K VYKL ++C+ D + RA +++SLD
Sbjct: 247 VSYITESSKGELLLVLRSISEEDSQ-----LETTKFKVYKLIDECEND-MLRAVKLKSLD 306
Query: 307 GDAMFIRDNQSICVPSKKFSNCPPNRIYYTE-YCNYYGTPLIYGL-QDAGVYSLEDNSFD 366
GDAMFI D+QSICV +K F C PN IY+ Y NY I L QD+G+++LED F
Sbjct: 307 GDAMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNY-----IPNLEQDSGIFNLEDKRFA 366
Query: 367 KHYITHPADKNLPPPIWIVPTMLQR 372
HYI PA KNLP PIWI+PT+ +
Sbjct: 367 NHYIRDPAHKNLPQPIWIIPTICSK 378
BLAST of Sed0012831 vs. NCBI nr
Match:
KAG6577578.1 (putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 346.3 bits (887), Expect = 3.3e-91
Identity = 191/385 (49.61%), Postives = 255/385 (66.23%), Query Frame = 0
Query: 7 RDWATLEADVIDMILSQMVSLYDYLQFSLVCKSWYFTALRFKHQRSIITFKFPQLPMFMI 66
RDW L+ DV+ +IL++MVSLYDYLQFS+VCKSWYF ALR KHQRSIIT KFPQLPM ++
Sbjct: 7 RDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQLPMLIV 66
Query: 67 PNSILQDQHHSLYDLRTNDIKYIYFKFNYDKMYCGSSFCWLIMLENSLHVSLFNPFFGSH 126
P+ + H LYD R N + + FKF ++K CGSSF WLIM E +L+++LFNPF G+
Sbjct: 67 PSKDGLENQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFNPFSGTV 126
Query: 127 ILLPPINVVSDEPNVYTSNTLVKAILTKDPSLYPNDYTIVAIYSLYHKLCLMKASDQTWI 186
I LP I + DEP+ Y + +VKAILTKDPSLYPNDY +VAIYS Y +LCLM+A+D++W
Sbjct: 127 ICLPSI-FIDDEPD-YAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRANDKSWT 186
Query: 187 YQNPQEQYYDTDVNLCNDYLYAIDQNMILRKIEV------DGNLSISL------------ 246
Y P+ D+N+ +D LYA + NM++ K+EV ++SISL
Sbjct: 187 YSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTNDFV 246
Query: 247 MAITPELNLFQLFSIIWSEHEDDLDSDILCLKTIKISVYKLSNDCDEDGIQRATEVESLD 306
++ E + +L ++ S E+D L+T K VYKL ++C+ D + RA +++SLD
Sbjct: 247 VSYITESSKGELLLVLRSISEEDSQ-----LETTKFKVYKLIDECEND-MLRAVKLKSLD 306
Query: 307 GDAMFIRDNQSICVPSKKFSNCPPNRIYYTE-YCNYYGTPLIYGL-QDAGVYSLEDNSFD 366
GDAMFI D+QSICV +K F C PN IY+ Y NY I L QD+G+++LED F
Sbjct: 307 GDAMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNY-----IPNLEQDSGIFNLEDKRFA 366
Query: 367 KHYITHPADKNLPPPIWIVPTMLQR 372
HYI PA KNLP PIWI+PT+ +
Sbjct: 367 NHYIRDPAHKNLPQPIWIIPTICSK 378
BLAST of Sed0012831 vs. NCBI nr
Match:
XP_023552957.1 (probable F-box protein At1g65740 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 343.2 bits (879), Expect = 2.8e-90
Identity = 190/385 (49.35%), Postives = 254/385 (65.97%), Query Frame = 0
Query: 7 RDWATLEADVIDMILSQMVSLYDYLQFSLVCKSWYFTALRFKHQRSIITFKFPQLPMFMI 66
RDW L+ DV+ +IL++MVSLYDYLQFS+VCKSWYF ALR KHQRSIIT KFPQLPM ++
Sbjct: 7 RDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQLPMLIV 66
Query: 67 PNSILQDQHHSLYDLRTNDIKYIYFKFNYDKMYCGSSFCWLIMLENSLHVSLFNPFFGSH 126
P+ ++ H LYD R N + + FKF ++K CGSSF WLIM E +L ++LFNPF G+
Sbjct: 67 PSKDGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPFSGTV 126
Query: 127 ILLPPINVVSDEPNVYTSNTLVKAILTKDPSLYPNDYTIVAIYSLYHKLCLMKASDQTWI 186
I LP I + DEP+ Y + +VKAILTKDP LYPNDY +VAIYS Y +LCLM+A+D++W
Sbjct: 127 ICLPSI-FIEDEPD-YAPDRIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRANDKSWT 186
Query: 187 YQNPQEQYYDTDVNLCNDYLYAIDQNMILRKIEV------DGNLSISL------------ 246
Y P+ D+N+ +D LYA + NM++ K+EV ++SISL
Sbjct: 187 YSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTNDFV 246
Query: 247 MAITPELNLFQLFSIIWSEHEDDLDSDILCLKTIKISVYKLSNDCDEDGIQRATEVESLD 306
++ E + +L ++ S E+D L+T K VYKL ++C+ D + RA +++SLD
Sbjct: 247 VSYITESSKGELLLVLRSISEEDSQ-----LETTKFKVYKLIDECEND-MLRAVKLKSLD 306
Query: 307 GDAMFIRDNQSICVPSKKFSNCPPNRIYYTE-YCNYYGTPLIYGL-QDAGVYSLEDNSFD 366
GDAMFI D+QSICV +K F C PN IY+ Y NY I L QD+G+++LED F
Sbjct: 307 GDAMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNY-----IPNLEQDSGIFNLEDKRFA 366
Query: 367 KHYITHPADKNLPPPIWIVPTMLQR 372
HYI PA KNLP PIWI+PT+ +
Sbjct: 367 NHYIRDPAHKNLPQPIWIIPTICSK 378
BLAST of Sed0012831 vs. ExPASy Swiss-Prot
Match:
Q6DR20 (F-box protein At2g17036 OS=Arabidopsis thaliana OX=3702 GN=At2g17036 PE=2 SV=1)
HSP 1 Score: 47.4 bits (111), Expect = 4.2e-04
Identity = 61/236 (25.85%), Postives = 98/236 (41.53%), Query Frame = 0
Query: 8 DWATLEADVIDMILSQMVSLYDYLQFSLVCKSWYFTA----LRFKHQRSIITFKFPQLPM 67
DWATL D++D+I + S +D +QF VC SW A L + H FP
Sbjct: 3 DWATLPKDLLDLISKCLESSFDLIQFRSVCSSWRSAAGPKRLLWAHNLPF----FPSDDK 62
Query: 68 FMIPNSILQDQHHSLYDLRTNDIKYIYFKFNYDKMYCGSS-FCWLIMLENSLHVS----L 127
+ N IL+ H S+ ++ N+ + C + F W++ + ++++VS L
Sbjct: 63 PFLSNVILRVAHQSILLIKPNEPQ------------CEADLFGWIVKVWDNIYVSRKMTL 122
Query: 128 FNP------FFGSHILLPPINVVSD-------------EPNVY--TSNTLVKAILTKDPS 187
P +F H LP I +S P+ Y +T ++ L K
Sbjct: 123 LKPLSSSRNYFPQH--LPRIFDMSKFTVRELCREVKLYHPDYYCVPGHTALELELGKTVV 182
Query: 188 LYPNDYTIVAIYSL-YHKLCLMKASDQTWIYQNPQEQYYDTDVNLCNDYLYAIDQN 213
Y ND V + L Y KL + ++ D+ W N D+ + + +AID N
Sbjct: 183 KYLNDDKFVLLTILEYGKLAVFRSWDREWTVINDYIPSRCQDLIMFDGRFFAIDYN 220
BLAST of Sed0012831 vs. ExPASy TrEMBL
Match:
A0A0A0L2J8 (DUF295 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G099610 PE=4 SV=1)
HSP 1 Score: 359.0 bits (920), Expect = 2.4e-95
Identity = 186/384 (48.44%), Postives = 260/384 (67.71%), Query Frame = 0
Query: 1 MNYLVVRDWATLEADVIDMILSQMVSLYDYLQFSLVCKSWYFTALRFKHQRSIITFKFPQ 60
M+ L RDW+TLE DV+ MIL++MVSLYDYLQFS VCKSW F ALR+KH RS+IT PQ
Sbjct: 1 MDCLESRDWSTLEYDVLGMILNKMVSLYDYLQFSSVCKSWNFIALRYKHHRSLITSNLPQ 60
Query: 61 LPMFMIPNSILQDQHHSLYDLRTNDIKYIYFKFNYDKMYCGSSFCWLIMLENSLHVSLFN 120
LPM ++P+ + H LYDL N+I+ + F +++K CGSSF WLIMLE++L ++LFN
Sbjct: 61 LPMLIVPSEYDSGKQHCLYDLINNEIRPVDFVCSFNKRCCGSSFGWLIMLEDTLDITLFN 120
Query: 121 PFFGSHILLPPINVVSDEPNVYTSNTLVKAILTKDPSLYPNDYTIVAIYSLYHKLCLMKA 180
PF G+ I +PPI + DEP Y+ + KAILTKDPS+YP +TIVAIYS + +LCLM+A
Sbjct: 121 PFNGNVIHIPPI-TIHDEPG-YSPIAIHKAILTKDPSIYPQGFTIVAIYSSFRRLCLMEA 180
Query: 181 SDQTWIYQNPQEQYYDTDVNLCNDYLYAI------------DQNMILRKIEVDGNLS--- 240
D+ WIY N DVN+ +D LY + D ++ L+K+ N +
Sbjct: 181 KDKRWIYHNLNRNNGFDDVNVVDDILYVLDWRIGLWIVKVEDSSIYLKKVIFSFNFNEAD 240
Query: 241 ISLMAITPELNLFQLFSIIWSEHEDDLDSDIL-CLKTIKISVYKLSNDCDEDGIQRATEV 300
I+ + ++ + L + + ++ E + ++IL +T K V+K++++C EDGI R EV
Sbjct: 241 IAYLIVSSKRELLLVSRFVVTQWEGQVPNEILKFTRTSKFIVHKVTHEC-EDGIMRVVEV 300
Query: 301 ESLDGDAMFIRDNQSICVPSKKFSNCPPNRIYYTEYCNYYGTPLIYGLQDAGVYSLEDNS 360
ESLDGD MFI DNQSICV +K F C P+RIY+T+ C+++ P ++G QDAG+Y +ED S
Sbjct: 301 ESLDGDVMFIGDNQSICVSTKDFPKCLPDRIYFTDNCHHFAFPYLHGHQDAGIYRVEDKS 360
Query: 361 FDKHYITHPADKNLPPPIWIVPTM 369
FD+HYI + A +NLPPPIWI+PT+
Sbjct: 361 FDRHYIVNRAHRNLPPPIWIIPTI 381
BLAST of Sed0012831 vs. ExPASy TrEMBL
Match:
A0A5A7TUR9 (F-box protein SKIP23-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G00500 PE=4 SV=1)
HSP 1 Score: 357.5 bits (916), Expect = 7.0e-95
Identity = 189/388 (48.71%), Postives = 257/388 (66.24%), Query Frame = 0
Query: 1 MNYLVVRDWATLEADVIDMILSQMVSLYDYLQFSLVCKSWYFTALRFKHQRSIITFKFPQ 60
M+ L RDW+TLE DV+ +IL++MVSLYDYLQFS VCKSW F ALR KHQRS+IT Q
Sbjct: 1 MDCLESRDWSTLEYDVLGVILNKMVSLYDYLQFSRVCKSWNFIALRHKHQRSLITSNHSQ 60
Query: 61 LPMFMIPNSILQDQHHSLYDLRTNDIKYIYFKFNYDKMYCGSSFCWLIMLENSLHVSLFN 120
LPM ++P+ ++ H LYDL N+I+ + F +++K CGSSF WLI+LE +L ++LFN
Sbjct: 61 LPMLIVPSEYDSEKQHCLYDLTNNEIRPVDFVCSFNKRCCGSSFGWLILLEETLDITLFN 120
Query: 121 PFFGSHILLPPINVVSDEPNVYTSNTLVKAILTKDPSLYPNDYTIVAIYSLYHKLCLMKA 180
PF G+ I +PPI + DEP+ Y + KAILTKDPSLYP+ +TIVAIYS Y +LCLM+A
Sbjct: 121 PFNGNKIHIPPI-TIDDEPD-YCPLAIHKAILTKDPSLYPHGFTIVAIYSSYRRLCLMEA 180
Query: 181 SDQTWIYQNPQEQYYDTDVNLCNDYLYAID------------QNMILRKI-----EVDGN 240
D+ WIY N D+N+ +D LY +D ++ L+K+ V+ +
Sbjct: 181 KDKRWIYHNLNRTNGFDDINVLDDVLYVLDWRIGLWIAKVENSSIYLKKVIFSIDFVEAD 240
Query: 241 LSISLMAITPELNLFQLFSIIWSEHEDDLDSDILCLKTIKISVYKLSNDCDEDGIQRATE 300
++ +++ EL L F I E +D D +L +T K VYK++ +C EDG E
Sbjct: 241 IAYLVVSSKRELLLVSRFVIDEREGQDP-DGIMLFTRTSKFIVYKVTREC-EDGTMSVVE 300
Query: 301 VESLDGDAMFIRDNQSICVPSKKFSNCPPNRIYYTEYCNYYGTPLIYGLQDAGVYSLEDN 360
VESLDGDAMFI DNQSIC ++ F C P+R+Y+T+ C++Y P ++G QDAG+Y LED
Sbjct: 301 VESLDGDAMFIGDNQSICASTRDFPKCLPDRVYFTDNCHHYRFPYLHGHQDAGIYRLEDK 360
Query: 361 SFDKHYITHPADKNLPPPIWIVPTMLQR 372
SFD+HYI A +NLPPPIWI+PT+ R
Sbjct: 361 SFDRHYIVDSAHRNLPPPIWIIPTICYR 384
BLAST of Sed0012831 vs. ExPASy TrEMBL
Match:
A0A6J1E6C7 (probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431011 PE=4 SV=1)
HSP 1 Score: 346.7 bits (888), Expect = 1.2e-91
Identity = 191/385 (49.61%), Postives = 256/385 (66.49%), Query Frame = 0
Query: 7 RDWATLEADVIDMILSQMVSLYDYLQFSLVCKSWYFTALRFKHQRSIITFKFPQLPMFMI 66
RDW L+ DV+ +IL++MVSLYDYLQFS+VCKSWYF ALR KHQRSIIT KFPQLPM ++
Sbjct: 7 RDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQLPMLIV 66
Query: 67 PNSILQDQHHSLYDLRTNDIKYIYFKFNYDKMYCGSSFCWLIMLENSLHVSLFNPFFGSH 126
P+ ++ H LYD R N + + FKF ++K CGSSF WLIM E +L+++LFNPF G+
Sbjct: 67 PSKNGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFNPFSGTV 126
Query: 127 ILLPPINVVSDEPNVYTSNTLVKAILTKDPSLYPNDYTIVAIYSLYHKLCLMKASDQTWI 186
I LP I + DEP+ Y + +VKAILTKDPSLYPNDY +VAIYS Y +LCLM+A+D++W
Sbjct: 127 ICLPSI-FIDDEPD-YAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRANDKSWT 186
Query: 187 YQNPQEQYYDTDVNLCNDYLYAIDQNMILRKIEV------DGNLSISL------------ 246
Y P+ D+N+ +D LYA + NM++ K+EV ++SISL
Sbjct: 187 YSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTNDFV 246
Query: 247 MAITPELNLFQLFSIIWSEHEDDLDSDILCLKTIKISVYKLSNDCDEDGIQRATEVESLD 306
++ E + +L ++ S E+D L+T K VYKL ++C+ D + RA +++SLD
Sbjct: 247 VSYITESSKGELLLVLRSISEEDSQ-----LETTKFKVYKLIDECEND-MLRAVKLKSLD 306
Query: 307 GDAMFIRDNQSICVPSKKFSNCPPNRIYYTE-YCNYYGTPLIYGL-QDAGVYSLEDNSFD 366
GDAMFI D+QSICV +K F C PN IY+ Y NY I L QD+G+++LED F
Sbjct: 307 GDAMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNY-----IPNLEQDSGIFNLEDKRFA 366
Query: 367 KHYITHPADKNLPPPIWIVPTMLQR 372
HYI PA KNLP PIWI+PT+ +
Sbjct: 367 NHYIRDPAHKNLPQPIWIIPTICSK 378
BLAST of Sed0012831 vs. ExPASy TrEMBL
Match:
A0A6J1E5P5 (probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431012 PE=4 SV=1)
HSP 1 Score: 333.6 bits (854), Expect = 1.1e-87
Identity = 180/380 (47.37%), Postives = 246/380 (64.74%), Query Frame = 0
Query: 7 RDWATLEADVIDMILSQMVSLYDYLQFSLVCKSWYFTALRFKHQRSIITFKFPQLPMFMI 66
RDW L+ DV+ +IL++MVSLYDYLQFSLVCKSWYF AL KHQRSII K PQLPM ++
Sbjct: 7 RDWTALDYDVLGVILNKMVSLYDYLQFSLVCKSWYFLALHHKHQRSIIASKVPQLPMLIV 66
Query: 67 PNSILQDQHHSLYDLRTNDIKYIYFKFNYDKMYCGSSFCWLIMLENSLHVSLFNPFFGSH 126
P+ ++ H LYDL TN ++ + FKF ++K CGSSF WLIM + +L + LFNPF G+
Sbjct: 67 PSKDGLEKQHCLYDLTTNIVRSVDFKFCFNKRCCGSSFGWLIMRDETLGIVLFNPFSGAV 126
Query: 127 ILLPPINVVSDEPNVYTSNTLVKAILTKDPSLYPNDYTIVAIYSLYHKLCLMKASDQTWI 186
I LPP+ D + ++KAILTKDPSLYPNDY +V I+ Y +LCL++A+D+TW
Sbjct: 127 IYLPPVATYDDIE--WIPGHIIKAILTKDPSLYPNDYMVVGIFGTYKRLCLIRANDKTWT 186
Query: 187 YQNPQEQYYDTDVNLCNDYLYAIDQNMILRKIEV----DGNLSISL---MAITPELNLFQ 246
Y P D+N+C D +YA + ++ + K+EV D + SIS+ M T +
Sbjct: 187 YYYPTPNIPFNDINICRDTIYATENDLDVWKVEVQNSEDESSSISISVKMVHTKRIRYIG 246
Query: 247 LFSIIWSEHEDDL------DSDILCLKTIKISVYKLSNDCDEDGIQRATEVESLDGDAMF 306
I S + L +S +T+ VYKL ++ +ED ++RA EV+SLDGDA+F
Sbjct: 247 TAYITESSKGELLVVLRIFNSGEEQFETVDFEVYKLIHE-NEDELRRAVEVKSLDGDAIF 306
Query: 307 IRDNQSICVPSKKFSNCPPNRIYYTE--YCNYYGTPLIYGLQDAGVYSLEDNSFDKHYIT 366
I D+QSICV +K+F+ C PNRIY+T+ Y N + G QD GV++ ED SF+ HYI
Sbjct: 307 IGDSQSICVSTKEFAGCLPNRIYFTDNRYVNLV-VGKLDGTQDLGVFNFEDGSFEDHYIA 366
Query: 367 HPADKNLPPPIWIVPTMLQR 372
PA KNLP P+WI+PT+ +
Sbjct: 367 DPAQKNLPSPMWIIPTICSK 382
BLAST of Sed0012831 vs. ExPASy TrEMBL
Match:
A0A6J1E923 (probable F-box protein At4g22165 OS=Cucurbita moschata OX=3662 GN=LOC111431007 PE=4 SV=1)
HSP 1 Score: 325.9 bits (834), Expect = 2.3e-85
Identity = 172/380 (45.26%), Postives = 245/380 (64.47%), Query Frame = 0
Query: 7 RDWATLEADVIDMILSQMVSLYDYLQFSLVCKSWYFTALRFKHQRSIITFKFPQLPMFMI 66
RDW L+ DV+ +IL++MVSLYDYLQF+LVCKSWYF ALR KH+RSIIT K QLPM ++
Sbjct: 7 RDWTALDYDVLGVILNKMVSLYDYLQFNLVCKSWYFLALRHKHERSIITSKVTQLPMLIV 66
Query: 67 PNSILQDQHHSLYDLRTNDIKYIYFKFNYDKMYCGSSFCWLIMLENSLHVSLFNPFFGSH 126
P+ ++ H LYDL N ++ + FKF ++K CGSSF WLIM + +L + LFNPF G+
Sbjct: 67 PSKDGLEKQHCLYDLTRNVVRPVDFKFCFNKRCCGSSFGWLIMRDETLGIVLFNPFSGTV 126
Query: 127 ILLPPINVVSDEPNVYTSNTLVKAILTKDPSLYPNDYTIVAIYSLYHKLCLMKASDQTWI 186
I LPP+ D + ++KAILTKDPSLYPNDY +VAI+ Y +LCL++A+D+TW
Sbjct: 127 IYLPPVATYDDIE--WIPGHIIKAILTKDPSLYPNDYMVVAIFGTYKRLCLIRANDKTWT 186
Query: 187 YQNPQEQYYDTDVNLCNDYLYAIDQNMILRKIEVDG--NLSISLMAITPELNLFQLFSII 246
Y P D+N+C D LYA + + + K+EV+ + S S+ ++ ++ ++
Sbjct: 187 YYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEMGHLV 246
Query: 247 WSEHEDDLDSDILCL-----------KTIKISVYKLSNDCDEDGIQRATEVESLDGDAMF 306
S + ++L + +T+ VYKL ++ +ED ++RA EV+SLDGDA+F
Sbjct: 247 TSYITESSKGELLVVLRILDSGEEQFETVDFEVYKLIHE-NEDEMRRAVEVKSLDGDAIF 306
Query: 307 IRDNQSICVPSKKFSNCPPNRIYYTE--YCNYYGTPLIYGLQDAGVYSLEDNSFDKHYIT 366
I D+QSICV +K+F C PNRIY+T+ Y N + G QD G ++ E+ SF+ YI
Sbjct: 307 IGDSQSICVSTKEFPGCLPNRIYFTDNRYVNLV-VGKLDGTQDLGTFNFENGSFEDQYIA 366
Query: 367 HPADKNLPPPIWIVPTMLQR 372
PA KNLP PIWI+PT+ +
Sbjct: 367 DPAQKNLPSPIWIIPTICSK 382
BLAST of Sed0012831 vs. TAIR 10
Match:
AT2G17036.1 (F-box family protein with a domain of unknown function (DUF295) )
HSP 1 Score: 47.4 bits (111), Expect = 3.0e-05
Identity = 61/236 (25.85%), Postives = 98/236 (41.53%), Query Frame = 0
Query: 8 DWATLEADVIDMILSQMVSLYDYLQFSLVCKSWYFTA----LRFKHQRSIITFKFPQLPM 67
DWATL D++D+I + S +D +QF VC SW A L + H FP
Sbjct: 2 DWATLPKDLLDLISKCLESSFDLIQFRSVCSSWRSAAGPKRLLWAHNLPF----FPSDDK 61
Query: 68 FMIPNSILQDQHHSLYDLRTNDIKYIYFKFNYDKMYCGSS-FCWLIMLENSLHVS----L 127
+ N IL+ H S+ ++ N+ + C + F W++ + ++++VS L
Sbjct: 62 PFLSNVILRVAHQSILLIKPNEPQ------------CEADLFGWIVKVWDNIYVSRKMTL 121
Query: 128 FNP------FFGSHILLPPINVVSD-------------EPNVY--TSNTLVKAILTKDPS 187
P +F H LP I +S P+ Y +T ++ L K
Sbjct: 122 LKPLSSSRNYFPQH--LPRIFDMSKFTVRELCREVKLYHPDYYCVPGHTALELELGKTVV 181
Query: 188 LYPNDYTIVAIYSL-YHKLCLMKASDQTWIYQNPQEQYYDTDVNLCNDYLYAIDQN 213
Y ND V + L Y KL + ++ D+ W N D+ + + +AID N
Sbjct: 182 KYLNDDKFVLLTILEYGKLAVFRSWDREWTVINDYIPSRCQDLIMFDGRFFAIDYN 219
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KGN56200.1 | 5.0e-95 | 48.44 | hypothetical protein Csa_011053 [Cucumis sativus] | [more] |
KAA0046890.1 | 1.4e-94 | 48.71 | F-box protein SKIP23-like [Cucumis melo var. makuwa] | [more] |
XP_022923266.1 | 2.6e-91 | 49.61 | probable F-box protein At1g65740 [Cucurbita moschata] | [more] |
KAG6577578.1 | 3.3e-91 | 49.61 | putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
XP_023552957.1 | 2.8e-90 | 49.35 | probable F-box protein At1g65740 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Q6DR20 | 4.2e-04 | 25.85 | F-box protein At2g17036 OS=Arabidopsis thaliana OX=3702 GN=At2g17036 PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0L2J8 | 2.4e-95 | 48.44 | DUF295 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G099610 PE=4... | [more] |
A0A5A7TUR9 | 7.0e-95 | 48.71 | F-box protein SKIP23-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo... | [more] |
A0A6J1E6C7 | 1.2e-91 | 49.61 | probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431011 P... | [more] |
A0A6J1E5P5 | 1.1e-87 | 47.37 | probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431012 P... | [more] |
A0A6J1E923 | 2.3e-85 | 45.26 | probable F-box protein At4g22165 OS=Cucurbita moschata OX=3662 GN=LOC111431007 P... | [more] |
Match Name | E-value | Identity | Description | |
AT2G17036.1 | 3.0e-05 | 25.85 | F-box family protein with a domain of unknown function (DUF295) | [more] |