Sed0012618 (gene) Chayote v1

Overview


Name	Sed0012618
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ethylene-responsive transcription factor TINY-like
Location	LG12: 29557891 .. 29558866 (-)
RNA-Seq Expression	Sed0012618
Synteny	Sed0012618

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTAAAACATTATAATACCCTACACCTTTCTCTCTCTAAAAAAACCCCACCATTTTTCACTCTCTCTTCTTCCACAACCAATCATTTTCATTTCCAATGGCTCAGCTCATTCAGAATCGCCCAGCCATTTTAAACTCCTCGCCGTCGCCGTCGGAGGAGAATGATCGGTCTAGGGCGGCGATGCCGGTCGGTTCGAACCAGAACCGGGTGAAGCGGTCCAGGGAAAACAGCAGCAGCCACCACCCGGTTTTCCGCGGGGTCCGAATGAGAGCGTGGGGCAAATGGGTTTCCGAGATTCGCGAGCCGCGAAAGAAGAGCCGGATCTGGCTCGGCACTTTCTCGACCGCTGAAATGGCCGCACGTGCCCACGACGTGGCCGCTTTAACCATCAAAGGCAACGCCGCGATTCTCAACTTCCCCCAACTCGCCGATCGATTCCCCCGACCCGCGTCCAACTCGCCACGTGACGTGCAGGCCGCCGCCGCCAAAGCCGCATCCATGGAAATCGCCACCCCTCCTCCGCCGTCTCCGCCGTCCTCCTCCGAGGAATTAAGCGAAATCGTGGAGCTGCCGAGTTTGGGGACGAGTTACGAAACGCCCGAGTTGGGGACCGAGTTTGTCTTCGTTGACCCGGTGGAGGGTTGGCTTTATTCTTACCCATGGTATCACAGAGTAAACAATGTGGATCAACTACAAGATTATGAGTTCATCTCAGATTTCGAACCTTTCTTCTCCCAACATTAAATTCCCCAAAACGATCTTTAAAACACCTCCATTTTCTGTCAATTTTTTTTTTTTCAAAAACCATTGATTTTGAGAATCGAAAAGGGGAATAAATGAGTGATTAATGTTTTTGGTTAATACGAATAAATGAGTAACAATCAATAATTGTAAGGATTTGGGTTTTGAGGCGGAATTAAATTATTCATCCATTCTCGCCTCCATGTTCATATAATTTATTTTCGGAGCATTTCAG

mRNA sequence

CTTAAAACATTATAATACCCTACACCTTTCTCTCTCTAAAAAAACCCCACCATTTTTCACTCTCTCTTCTTCCACAACCAATCATTTTCATTTCCAATGGCTCAGCTCATTCAGAATCGCCCAGCCATTTTAAACTCCTCGCCGTCGCCGTCGGAGGAGAATGATCGGTCTAGGGCGGCGATGCCGGTCGGTTCGAACCAGAACCGGGTGAAGCGGTCCAGGGAAAACAGCAGCAGCCACCACCCGGTTTTCCGCGGGGTCCGAATGAGAGCGTGGGGCAAATGGGTTTCCGAGATTCGCGAGCCGCGAAAGAAGAGCCGGATCTGGCTCGGCACTTTCTCGACCGCTGAAATGGCCGCACGTGCCCACGACGTGGCCGCTTTAACCATCAAAGGCAACGCCGCGATTCTCAACTTCCCCCAACTCGCCGATCGATTCCCCCGACCCGCGTCCAACTCGCCACGTGACGTGCAGGCCGCCGCCGCCAAAGCCGCATCCATGGAAATCGCCACCCCTCCTCCGCCGTCTCCGCCGTCCTCCTCCGAGGAATTAAGCGAAATCGTGGAGCTGCCGAGTTTGGGGACGAGTTACGAAACGCCCGAGTTGGGGACCGAGTTTGTCTTCGTTGACCCGGTGGAGGGTTGGCTTTATTCTTACCCATGGTATCACAGAGTAAACAATGTGGATCAACTACAAGATTATGAGTTCATCTCAGATTTCGAACCTTTCTTCTCCCAACATTAAATTCCCCAAAACGATCTTTAAAACACCTCCATTTTCTGTCAATTTTTTTTTTTTCAAAAACCATTGATTTTGAGAATCGAAAAGGGGAATAAATGAGTGATTAATGTTTTTGGTTAATACGAATAAATGAGTAACAATCAATAATTGTAAGGATTTGGGTTTTGAGGCGGAATTAAATTATTCATCCATTCTCGCCTCCATGTTCATATAATTTATTTTCGGAGCATTTCAG

Coding sequence (CDS)

ATGGCTCAGCTCATTCAGAATCGCCCAGCCATTTTAAACTCCTCGCCGTCGCCGTCGGAGGAGAATGATCGGTCTAGGGCGGCGATGCCGGTCGGTTCGAACCAGAACCGGGTGAAGCGGTCCAGGGAAAACAGCAGCAGCCACCACCCGGTTTTCCGCGGGGTCCGAATGAGAGCGTGGGGCAAATGGGTTTCCGAGATTCGCGAGCCGCGAAAGAAGAGCCGGATCTGGCTCGGCACTTTCTCGACCGCTGAAATGGCCGCACGTGCCCACGACGTGGCCGCTTTAACCATCAAAGGCAACGCCGCGATTCTCAACTTCCCCCAACTCGCCGATCGATTCCCCCGACCCGCGTCCAACTCGCCACGTGACGTGCAGGCCGCCGCCGCCAAAGCCGCATCCATGGAAATCGCCACCCCTCCTCCGCCGTCTCCGCCGTCCTCCTCCGAGGAATTAAGCGAAATCGTGGAGCTGCCGAGTTTGGGGACGAGTTACGAAACGCCCGAGTTGGGGACCGAGTTTGTCTTCGTTGACCCGGTGGAGGGTTGGCTTTATTCTTACCCATGGTATCACAGAGTAAACAATGTGGATCAACTACAAGATTATGAGTTCATCTCAGATTTCGAACCTTTCTTCTCCCAACATTAA

Protein sequence

MAQLIQNRPAILNSSPSPSEENDRSRAAMPVGSNQNRVKRSRENSSSHHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTAEMAARAHDVAALTIKGNAAILNFPQLADRFPRPASNSPRDVQAAAAKAASMEIATPPPPSPPSSSEELSEIVELPSLGTSYETPELGTEFVFVDPVEGWLYSYPWYHRVNNVDQLQDYEFISDFEPFFSQH

Homology

[Close]

BLAST of Sed0012618 vs. NCBI nr
Match: XP_023531433.1 (dehydration-responsive element-binding protein 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 282.3 bits (721), Expect = 3.4e-72
Identity = 160/233 (68.67%), Postives = 179/233 (76.82%), Query Frame = 0


Query: 1   MAQLI-QNRPAILNSSPSPSE-------------ENDRSRAAMPVGSNQNRVKRSRE--N 60
           MA+LI  N PAILNSS S S              E+D++ AA+ V SN+ R KR RE  N
Sbjct: 1   MARLIVHNDPAILNSSSSSSTSSSSTSSSSSSSVESDQAGAAIAVDSNRKRAKRPRESSN 60

Query: 61  SSSHHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTAEMAARAHDVAALTIKGNAAI 120
            +S HPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFST EMAARAHDVAALTIKGN+AI
Sbjct: 61  GNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGNSAI 120

Query: 121 LNFPQLADRFPRPASNSPRDVQAAAAKAASMEIATPPPPSP--------------PSSSE 180
           LNFPQLA +FPRPASNSPRDVQAAAAKAASME+ TPP P+P              PS+ E
Sbjct: 121 LNFPQLAHQFPRPASNSPRDVQAAAAKAASMELPTPPLPTPSSSSSSSSSSSGLCPSTPE 180

Query: 181 ELSEIVELPSLGTSYETPELGTEFVFVDPVEGWLYSYPWYHRVNNVDQLQDYE 204
           ELSEIVELPSLGTSYET ELG EFVF D +EGWLYSYPWY+RV+NV++ ++ E
Sbjct: 181 ELSEIVELPSLGTSYETTELGKEFVFADSLEGWLYSYPWYNRVSNVEEEEEEE 233

[Close]

BLAST of Sed0012618 vs. NCBI nr
Match: XP_022973678.1 (ethylene-responsive transcription factor TINY-like [Cucurbita maxima])

HSP 1 Score: 281.6 bits (719), Expect = 5.8e-72
Identity = 160/240 (66.67%), Postives = 179/240 (74.58%), Query Frame = 0


Query: 1   MAQL-IQNRPAILN-----------SSPSPSEENDRSRAAMPVGSNQNRVKRSRE--NSS 60
           MA+L + N PAI N           SS S S E D++ AA+ + SN+ R KR RE  N +
Sbjct: 1   MARLVVHNDPAIFNSASSSSSSFSSSSSSSSVEIDQAGAAIAIHSNRKRAKRPRETSNGN 60

Query: 61  SHHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTAEMAARAHDVAALTIKGNAAILN 120
           S HPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFST EMAARAHDVAALTIKGN+AILN
Sbjct: 61  SKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGNSAILN 120

Query: 121 FPQLADRFPRPASNSPRDVQAAAAKAASMEIATPPPPSP-----------------PSSS 180
           FPQLA +FPRPASNSPRDVQAAAAKAASME+ TPPPP+P                 PS+ 
Sbjct: 121 FPQLAHQFPRPASNSPRDVQAAAAKAASMELPTPPPPTPSSSSSSSSSSSSSSGLCPSTP 180

Query: 181 EELSEIVELPSLGTSYETPELGTEFVFVDPVEGWLYSYPWYHRVNNV--DQLQDYEFISD 208
           EELSEIVELPSLGTSYET ELG EFVF D +EGWLYSYPWY+RV+NV  ++ +DY    D
Sbjct: 181 EELSEIVELPSLGTSYETTELGKEFVFADSLEGWLYSYPWYNRVSNVEEEEEEDYRLFGD 240

[Close]

BLAST of Sed0012618 vs. NCBI nr
Match: XP_022961344.1 (dehydration-responsive element-binding protein 3-like [Cucurbita moschata])

HSP 1 Score: 281.2 bits (718), Expect = 7.6e-72
Identity = 161/232 (69.40%), Postives = 175/232 (75.43%), Query Frame = 0


Query: 1   MAQLIQNRPAILN-SSPSPSE--------------ENDRSRAAMPVGSNQNRVKRSRENS 60
           M  LI+N     + SSPSPS               E+D+S  A  V SN+ R KR RENS
Sbjct: 47  MPLLIENDSTTFSFSSPSPSPSPSSSGSLSMVLLGESDQSGTA--VDSNRKRAKRPRENS 106

Query: 61  SSHHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTAEMAARAHDVAALTIKGNAAIL 120
           +S HP+FRGVRMRAWGKWVSEIREPRKKSRIWLGTFST EMAARAHDVAALTIKGN+AIL
Sbjct: 107 NSKHPLFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGNSAIL 166

Query: 121 NFPQLADRFPRPASNSPRDVQAAAAKAASMEIATPPPPSP---------PSSSEELSEIV 180
           NFP+LAD+FPRPASNSPRDVQAAAAKAASMEI TPPP S          PS+ EELSEIV
Sbjct: 167 NFPELADQFPRPASNSPRDVQAAAAKAASMEIPTPPPSSSSSSSSSSLCPSTPEELSEIV 226

Query: 181 ELPSLGTSYETPELGTEFVFVDPVEGWLYSYPWYHRV-NNVDQLQDYEFISD 208
           +LPSLGTSYET ELG EFVFVD VEGWLYSYPWY RV NN D+ Q + F  D
Sbjct: 227 QLPSLGTSYETAELGNEFVFVDSVEGWLYSYPWYQRVNNNADEEQSHGFFRD 276

[Close]

BLAST of Sed0012618 vs. NCBI nr
Match: KAG7023608.1 (Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 280.4 bits (716), Expect = 1.3e-71
Identity = 156/214 (72.90%), Postives = 168/214 (78.50%), Query Frame = 0


Query: 15  SPSPSE----------ENDRSRAAMPVGSNQNRVKRSRENSSSHHPVFRGVRMRAWGKWV 74
           SPSPS           E+D+S  A  V SN+ R KR RENS+S HP+FRGVRMRAWGKWV
Sbjct: 22  SPSPSSSGSLSMVLLGESDQSGTA--VDSNRKRAKRPRENSNSKHPLFRGVRMRAWGKWV 81

Query: 75  SEIREPRKKSRIWLGTFSTAEMAARAHDVAALTIKGNAAILNFPQLADRFPRPASNSPRD 134
           SEIREPRKKSRIWLGTFST EMAARAHDVAALTIKGN+AILNFP+LAD+FPRPASNSPRD
Sbjct: 82  SEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGNSAILNFPELADQFPRPASNSPRD 141

Query: 135 VQAAAAKAASMEIATPPPPSP----------PSSSEELSEIVELPSLGTSYETPELGTEF 194
           VQAAAAKAASMEI TPPP S           PS+ EELSEIV+LPSLGTSYET ELG EF
Sbjct: 142 VQAAAAKAASMEIPTPPPSSSSSSSSSSSLCPSTPEELSEIVQLPSLGTSYETAELGNEF 201

Query: 195 VFVDPVEGWLYSYPWYHRV-NNVDQLQDYEFISD 208
           VFVD VEGWLYSYPWY RV NN D+ Q + F  D
Sbjct: 202 VFVDSVEGWLYSYPWYQRVNNNADEEQSHGFFRD 233

[Close]

BLAST of Sed0012618 vs. NCBI nr
Match: XP_022987846.1 (dehydration-responsive element-binding protein 3-like [Cucurbita maxima])

HSP 1 Score: 279.3 bits (713), Expect = 2.9e-71
Identity = 157/229 (68.56%), Postives = 172/229 (75.11%), Query Frame = 0


Query: 1   MAQLIQNRPAILN-SSPSPSEENDRSRAAMPVGSNQ---NRVKRSRENSSSHHPVFRGVR 60
           M  LI+N     + SSPSPS  +  S + +P+  +     R KR RENS+S HP+FRGVR
Sbjct: 1   MPLLIENDSTTCSFSSPSPSPSSSGSLSTVPLRESDQSGKRAKRPRENSNSKHPLFRGVR 60

Query: 61  MRAWGKWVSEIREPRKKSRIWLGTFSTAEMAARAHDVAALTIKGNAAILNFPQLADRFPR 120
           MRAWGKWVSEIREPRKKSRIWLGTFST EMAARAHDVAALTIKGN+AILNFP+LAD+FPR
Sbjct: 61  MRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGNSAILNFPELADQFPR 120

Query: 121 PASNSPRDVQAAAAKAASMEIATPPPPSP-----------------PSSSEELSEIVELP 180
           PASNSPRDVQAAAAKAASMEI TPPP S                  PS+ EELSEIVELP
Sbjct: 121 PASNSPRDVQAAAAKAASMEIPTPPPSSSSSSSSSSSSSSSSSSLCPSTPEELSEIVELP 180

Query: 181 SLGTSYETPELGTEFVFVDPVEGWLYSYPWYHRV-NNVDQLQDYEFISD 208
           SLGTSYET ELG EFVFVD VEGWLYSYPWY RV NN D+ Q + F  D
Sbjct: 181 SLGTSYETAELGNEFVFVDSVEGWLYSYPWYQRVNNNADEEQSHGFFRD 229

[Close]

BLAST of Sed0012618 vs. ExPASy Swiss-Prot
Match: Q9LYD3 (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 5.7e-46
Identity = 112/196 (57.14%), Postives = 125/196 (63.78%), Query Frame = 0


Query: 18  PSEENDRSRAAMPVGSNQNRVKRSRENSSSHHPVFRGVRMRAWGKWVSEIREPRKKSRIW 77
           P+ E+D          ++ + KR R+  S  HPV+RGVRMR WGKWVSEIREPRKKSRIW
Sbjct: 19  PNSESDSVSDKSKAEQSEKKTKRGRD--SGKHPVYRGVRMRNWGKWVSEIREPRKKSRIW 78

Query: 78  LGTFSTAEMAARAHDVAALTIKGNAAILNFPQLADRFPRPASNSPRDVQAAAAKAASMEI 137
           LGTF T EMAARAHDVAAL+IKG AAILNFP+LAD FPRP S SPRD+Q AA KAA ME 
Sbjct: 79  LGTFPTPEMAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEP 138

Query: 138 ATPPPPSPPSS----------------------SEELSEIVELPSLGTSY--ETPELGTE 190
            T    S  SS                      SEEL EIVELPSLG SY  ++  LG E
Sbjct: 139 TTSFSSSTSSSSSLSSTSSLESLVLVMDLSRTESEELGEIVELPSLGASYDVDSANLGNE 198

[Close]

BLAST of Sed0012618 vs. ExPASy Swiss-Prot
Match: Q39127 (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN=TINY PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 5.5e-41
Identity = 101/192 (52.60%), Postives = 118/192 (61.46%), Query Frame = 0


Query: 19  SEENDRSRAAMPVGSNQNRVKRSRENSSSHHPVFRGVRMRAWGKWVSEIREPRKKSRIWL 78
           + E+ +S  A  V       K+     S  HPV+RGVR R WGKWVSEIREPRKKSRIWL
Sbjct: 3   ASESTKSWEASAVRQENEEEKKKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWL 62

Query: 79  GTFSTAEMAARAHDVAALTIKGNAAILNFPQLADRFPRPASNSPRDVQAAAAKAASMEIA 138
           GTF + EMAARAHDVAAL+IKG +AILNFP LA  FPRP+S SPRD+Q AA KAA ME +
Sbjct: 63  GTFPSPEMAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETS 122

Query: 139 --------------------TPPPPSPPSSSEELSEIVELPSLGTSYE-TPELGTEFVFV 190
                                    S  + SEEL EIVELPSLG+SY+   +LG EF+F 
Sbjct: 123 QSFSSSSSLTFSSSQSSSSLESLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEFIFS 182

[Close]

BLAST of Sed0012618 vs. ExPASy Swiss-Prot
Match: O80654 (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 GN=ERF037 PE=1 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 6.1e-40
Identity = 116/244 (47.54%), Postives = 138/244 (56.56%), Query Frame = 0


Query: 10  AILNSSPSPSEENDRSRAAMPVGSNQNRVKRSRENSSSHHPVFRGVRMRAWGKWVSEIRE 69
           ++  SSP P EE+          +N  +  RS        P +RGVRMR WGKWVSEIRE
Sbjct: 8   SVKQSSPVPEEEDHHHHQQDSHRTNTKKRVRS-------DPGYRGVRMRTWGKWVSEIRE 67

Query: 70  PRKKSRIWLGTFSTAEMAARAHDVAALTIKGNAAILNFPQLADRFPRPASNSPRDVQAAA 129
           PRKKSRIWLGTFST EMAARAHD AALTIKG +A+LNFP+LA   PRPAS+SPRDVQAAA
Sbjct: 68  PRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELATYLPRPASSSPRDVQAAA 127

Query: 130 AKAASMEIA-----------------------------------TPPPPSPPSSSEELSE 189
           A AA+M+ +                                   +P      S++EELSE
Sbjct: 128 AVAAAMDFSPSSSSLVVSDPTTVIAPAETQLSSSSYSTCTSSSLSPSSEEAASTAEELSE 187

Query: 190 IVELPSLGTSYETPELGTEFVFVDPVEGWLYSYPWYHRVNNVDQL---QDYEFISDFEPF 216
           IVELPSL TSY+  E  +EFV+VD    +  S PWY  +NN        D   IS  EPF
Sbjct: 188 IVELPSLETSYD--ESLSEFVYVD--SAYPPSSPWY--INNCYSFYYHSDENGISMAEPF 238

[Close]

BLAST of Sed0012618 vs. ExPASy Swiss-Prot
Match: Q9LU18 (Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana OX=3702 GN=ERF036 PE=2 SV=2)

HSP 1 Score: 164.9 bits (416), Expect = 1.0e-39
Identity = 104/210 (49.52%), Postives = 134/210 (63.81%), Query Frame = 0


Query: 12  LNSSPSP-SEENDRSRAAMPVGS----------NQNRVKRSRENSSS------HHPVFRG 71
           LNSS SP S  +D+S A     +          N N  KR R++SS+       HPV+RG
Sbjct: 4   LNSSASPTSSSSDQSDATTTTSTHLSEEEAPPRNNNTRKRRRDSSSASSSSSMQHPVYRG 63

Query: 72  VRMRAWGKWVSEIREPRKKSRIWLGTFSTAEMAARAHDVAALTIKGNAAILNFPQLADRF 131
           VRMR+WGKWVSEIR+PRKK+RIWLGTF TA+MAARAHDVAALTIKG++A+LNFP+LA  F
Sbjct: 64  VRMRSWGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFPELASLF 123

Query: 132 PRPASNSPRDVQAAAAKAASMEI---------ATPPPPSPPSS--------SEELSEIVE 186
           PRPAS+SP D+Q AAA+AA+M +         A   PPS  SS         E L +IVE
Sbjct: 124 PRPASSSPHDIQTAAAEAAAMVVEEKLLEKDEAPEAPPSSESSYVAAESEDEERLEKIVE 183

[Close]

BLAST of Sed0012618 vs. ExPASy Swiss-Prot
Match: Q9M080 (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 GN=ERF043 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.7e-34
Identity = 93/188 (49.47%), Postives = 109/188 (57.98%), Query Frame = 0


Query: 39  KRSRENSSSHHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTAEMAARAHDVAALTI 98
           K  +EN+    PV+RGVRMR+WGKWVSEIREPRKKSRIWLGTF TAEMA RAHDVAA++I
Sbjct: 8   KEKKENNK--QPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSI 67

Query: 99  KGNAAILNFPQLADRFPRPASNSPRDVQAAAAKAASMEIATPPPPSPPSSSE-------- 158
           KG +AILNFP+L+   PRP S SPRDV+AAA KAA M+  T    S   +SE        
Sbjct: 68  KGTSAILNFPELSKLLPRPVSLSPRDVRAAATKAALMDFDTTAFRSDTETSETTTSNKMS 127

Query: 159 -----------------------------ELSEIVELPSLGTSYETPELGTEFVFVDPVE 190
                                        +L EIV+LPSLGTS        EFV  D +E
Sbjct: 128 ESSESNETVSFSSSSWSSVTSIEESTVSDDLDEIVKLPSLGTSLNE---SNEFVIFDSLE 187

[Close]

BLAST of Sed0012618 vs. ExPASy TrEMBL
Match: A0A6J1IDV7 (ethylene-responsive transcription factor TINY-like OS=Cucurbita maxima OX=3661 GN=LOC111472260 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 2.8e-72
Identity = 160/240 (66.67%), Postives = 179/240 (74.58%), Query Frame = 0


Query: 1   MAQL-IQNRPAILN-----------SSPSPSEENDRSRAAMPVGSNQNRVKRSRE--NSS 60
           MA+L + N PAI N           SS S S E D++ AA+ + SN+ R KR RE  N +
Sbjct: 1   MARLVVHNDPAIFNSASSSSSSFSSSSSSSSVEIDQAGAAIAIHSNRKRAKRPRETSNGN 60

Query: 61  SHHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTAEMAARAHDVAALTIKGNAAILN 120
           S HPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFST EMAARAHDVAALTIKGN+AILN
Sbjct: 61  SKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGNSAILN 120

Query: 121 FPQLADRFPRPASNSPRDVQAAAAKAASMEIATPPPPSP-----------------PSSS 180
           FPQLA +FPRPASNSPRDVQAAAAKAASME+ TPPPP+P                 PS+ 
Sbjct: 121 FPQLAHQFPRPASNSPRDVQAAAAKAASMELPTPPPPTPSSSSSSSSSSSSSSGLCPSTP 180

Query: 181 EELSEIVELPSLGTSYETPELGTEFVFVDPVEGWLYSYPWYHRVNNV--DQLQDYEFISD 208
           EELSEIVELPSLGTSYET ELG EFVF D +EGWLYSYPWY+RV+NV  ++ +DY    D
Sbjct: 181 EELSEIVELPSLGTSYETTELGKEFVFADSLEGWLYSYPWYNRVSNVEEEEEEDYRLFGD 240

[Close]

BLAST of Sed0012618 vs. ExPASy TrEMBL
Match: A0A6J1HDR9 (dehydration-responsive element-binding protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111461861 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 3.7e-72
Identity = 161/232 (69.40%), Postives = 175/232 (75.43%), Query Frame = 0


Query: 1   MAQLIQNRPAILN-SSPSPSE--------------ENDRSRAAMPVGSNQNRVKRSRENS 60
           M  LI+N     + SSPSPS               E+D+S  A  V SN+ R KR RENS
Sbjct: 47  MPLLIENDSTTFSFSSPSPSPSPSSSGSLSMVLLGESDQSGTA--VDSNRKRAKRPRENS 106

Query: 61  SSHHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTAEMAARAHDVAALTIKGNAAIL 120
           +S HP+FRGVRMRAWGKWVSEIREPRKKSRIWLGTFST EMAARAHDVAALTIKGN+AIL
Sbjct: 107 NSKHPLFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGNSAIL 166

Query: 121 NFPQLADRFPRPASNSPRDVQAAAAKAASMEIATPPPPSP---------PSSSEELSEIV 180
           NFP+LAD+FPRPASNSPRDVQAAAAKAASMEI TPPP S          PS+ EELSEIV
Sbjct: 167 NFPELADQFPRPASNSPRDVQAAAAKAASMEIPTPPPSSSSSSSSSSLCPSTPEELSEIV 226

Query: 181 ELPSLGTSYETPELGTEFVFVDPVEGWLYSYPWYHRV-NNVDQLQDYEFISD 208
           +LPSLGTSYET ELG EFVFVD VEGWLYSYPWY RV NN D+ Q + F  D
Sbjct: 227 QLPSLGTSYETAELGNEFVFVDSVEGWLYSYPWYQRVNNNADEEQSHGFFRD 276

[Close]

BLAST of Sed0012618 vs. ExPASy TrEMBL
Match: A0A6J1JFH6 (dehydration-responsive element-binding protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111485266 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.4e-71
Identity = 157/229 (68.56%), Postives = 172/229 (75.11%), Query Frame = 0


Query: 1   MAQLIQNRPAILN-SSPSPSEENDRSRAAMPVGSNQ---NRVKRSRENSSSHHPVFRGVR 60
           M  LI+N     + SSPSPS  +  S + +P+  +     R KR RENS+S HP+FRGVR
Sbjct: 1   MPLLIENDSTTCSFSSPSPSPSSSGSLSTVPLRESDQSGKRAKRPRENSNSKHPLFRGVR 60

Query: 61  MRAWGKWVSEIREPRKKSRIWLGTFSTAEMAARAHDVAALTIKGNAAILNFPQLADRFPR 120
           MRAWGKWVSEIREPRKKSRIWLGTFST EMAARAHDVAALTIKGN+AILNFP+LAD+FPR
Sbjct: 61  MRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGNSAILNFPELADQFPR 120

Query: 121 PASNSPRDVQAAAAKAASMEIATPPPPSP-----------------PSSSEELSEIVELP 180
           PASNSPRDVQAAAAKAASMEI TPPP S                  PS+ EELSEIVELP
Sbjct: 121 PASNSPRDVQAAAAKAASMEIPTPPPSSSSSSSSSSSSSSSSSSLCPSTPEELSEIVELP 180

Query: 181 SLGTSYETPELGTEFVFVDPVEGWLYSYPWYHRV-NNVDQLQDYEFISD 208
           SLGTSYET ELG EFVFVD VEGWLYSYPWY RV NN D+ Q + F  D
Sbjct: 181 SLGTSYETAELGNEFVFVDSVEGWLYSYPWYQRVNNNADEEQSHGFFRD 229

[Close]

BLAST of Sed0012618 vs. ExPASy TrEMBL
Match: A0A6J1EZ61 (ethylene-responsive transcription factor TINY-like OS=Cucurbita moschata OX=3662 GN=LOC111440123 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.4e-71
Identity = 161/241 (66.80%), Postives = 178/241 (73.86%), Query Frame = 0


Query: 1   MAQLI-QNRPAILNSSPSPSE--------ENDRSRAAMPVGSNQNRVKRSRE--NSSSHH 60
           MA+LI  N PAI NSS S S         E D++ AA+ V SN+ R KR RE  N +S H
Sbjct: 1   MARLIVHNDPAIFNSSSSSSSSSSSASSVEIDQAGAAIAVDSNRKRAKRPRETSNGNSKH 60

Query: 61  PVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTAEMAARAHDVAALTIKGNAAILNFPQ 120
           PVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFST EMAARAHDVAALTIKGN+AILNFPQ
Sbjct: 61  PVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGNSAILNFPQ 120

Query: 121 LADRFPRPASNSPRDVQAAAAKAASMEIATPPPPSP---------------------PSS 180
           LA +FPRPASNSPRDVQAAAAKAASME+ TPP P+P                     PS+
Sbjct: 121 LAHQFPRPASNSPRDVQAAAAKAASMELPTPPLPTPSSSSPSPSSSSSSSSSSSGLCPST 180

Query: 181 SEELSEIVELPSLGTSYETPELGTEFVFVDPVEGWLYSYPWYHRVNNV--DQLQDYEFIS 208
            EELSEIVELPSLGTSYET ELG EFVF D +EGWLYSYPWY+RV+NV  ++ +DY    
Sbjct: 181 PEELSEIVELPSLGTSYETTELGKEFVFADSLEGWLYSYPWYNRVSNVEEEEEEDYRLFG 240

[Close]

BLAST of Sed0012618 vs. ExPASy TrEMBL
Match: A0A0A0LWW4 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G364460 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.9e-68
Identity = 153/235 (65.11%), Postives = 174/235 (74.04%), Query Frame = 0


Query: 5   IQNRPAILNSSPSPSEEND-----RSRAAMPVGSNQNRVKRSRE----NSSSHHPVFRGV 64
           ++N   ILNSSP PS  +       S ++  V SN+ R+KR RE    N++S HPVFRGV
Sbjct: 1   MENDSTILNSSPPPSPSSSGSLSPPSSSSAVVESNRKRLKRPRENNNNNNNSKHPVFRGV 60

Query: 65  RMRAWGKWVSEIREPRKKSRIWLGTFSTAEMAARAHDVAALTIKGNAAILNFPQLADRFP 124
           RMRAWGKWVSEIREPRKKSRIWLGTFST EMAARAHDVAALTIKG +AILNFP+LA +FP
Sbjct: 61  RMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGTSAILNFPELAHQFP 120

Query: 125 RPASNSPRDVQAAAAKAASMEIATPPPPSP------------------PSSSEELSEIVE 184
           RPAS SPRDVQAAAAKAASMEI TPP  S                   PSS EEL+EIVE
Sbjct: 121 RPASTSPRDVQAAAAKAASMEIPTPPLSSSSSTSTSSSSSSSSSASLCPSSPEELTEIVE 180

Query: 185 LPSLGTSYETPELGTEFVFVDPVEGWLYSYPWYHRVNNVDQLQDYEFISDFEPFF 213
           LPSLGTSYET ELG EFVFVD VEGWLYSYPWY+RV+N +Q+++ +   D+  FF
Sbjct: 181 LPSLGTSYETAELGNEFVFVDSVEGWLYSYPWYNRVSNAEQVEELQ--EDYGLFF 233

[Close]

BLAST of Sed0012618 vs. TAIR 10
Match: AT5G11590.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 185.7 bits (470), Expect = 4.0e-47
Identity = 112/196 (57.14%), Postives = 125/196 (63.78%), Query Frame = 0


Query: 18  PSEENDRSRAAMPVGSNQNRVKRSRENSSSHHPVFRGVRMRAWGKWVSEIREPRKKSRIW 77
           P+ E+D          ++ + KR R+  S  HPV+RGVRMR WGKWVSEIREPRKKSRIW
Sbjct: 19  PNSESDSVSDKSKAEQSEKKTKRGRD--SGKHPVYRGVRMRNWGKWVSEIREPRKKSRIW 78

Query: 78  LGTFSTAEMAARAHDVAALTIKGNAAILNFPQLADRFPRPASNSPRDVQAAAAKAASMEI 137
           LGTF T EMAARAHDVAAL+IKG AAILNFP+LAD FPRP S SPRD+Q AA KAA ME 
Sbjct: 79  LGTFPTPEMAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEP 138

Query: 138 ATPPPPSPPSS----------------------SEELSEIVELPSLGTSY--ETPELGTE 190
            T    S  SS                      SEEL EIVELPSLG SY  ++  LG E
Sbjct: 139 TTSFSSSTSSSSSLSSTSSLESLVLVMDLSRTESEELGEIVELPSLGASYDVDSANLGNE 198

[Close]

BLAST of Sed0012618 vs. TAIR 10
Match: AT5G25810.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 169.1 bits (427), Expect = 3.9e-42
Identity = 101/192 (52.60%), Postives = 118/192 (61.46%), Query Frame = 0


Query: 19  SEENDRSRAAMPVGSNQNRVKRSRENSSSHHPVFRGVRMRAWGKWVSEIREPRKKSRIWL 78
           + E+ +S  A  V       K+     S  HPV+RGVR R WGKWVSEIREPRKKSRIWL
Sbjct: 3   ASESTKSWEASAVRQENEEEKKKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWL 62

Query: 79  GTFSTAEMAARAHDVAALTIKGNAAILNFPQLADRFPRPASNSPRDVQAAAAKAASMEIA 138
           GTF + EMAARAHDVAAL+IKG +AILNFP LA  FPRP+S SPRD+Q AA KAA ME +
Sbjct: 63  GTFPSPEMAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETS 122

Query: 139 --------------------TPPPPSPPSSSEELSEIVELPSLGTSYE-TPELGTEFVFV 190
                                    S  + SEEL EIVELPSLG+SY+   +LG EF+F 
Sbjct: 123 QSFSSSSSLTFSSSQSSSSLESLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEFIFS 182

[Close]

BLAST of Sed0012618 vs. TAIR 10
Match: AT1G77200.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 165.6 bits (418), Expect = 4.3e-41
Identity = 116/244 (47.54%), Postives = 138/244 (56.56%), Query Frame = 0


Query: 10  AILNSSPSPSEENDRSRAAMPVGSNQNRVKRSRENSSSHHPVFRGVRMRAWGKWVSEIRE 69
           ++  SSP P EE+          +N  +  RS        P +RGVRMR WGKWVSEIRE
Sbjct: 8   SVKQSSPVPEEEDHHHHQQDSHRTNTKKRVRS-------DPGYRGVRMRTWGKWVSEIRE 67

Query: 70  PRKKSRIWLGTFSTAEMAARAHDVAALTIKGNAAILNFPQLADRFPRPASNSPRDVQAAA 129
           PRKKSRIWLGTFST EMAARAHD AALTIKG +A+LNFP+LA   PRPAS+SPRDVQAAA
Sbjct: 68  PRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELATYLPRPASSSPRDVQAAA 127

Query: 130 AKAASMEIA-----------------------------------TPPPPSPPSSSEELSE 189
           A AA+M+ +                                   +P      S++EELSE
Sbjct: 128 AVAAAMDFSPSSSSLVVSDPTTVIAPAETQLSSSSYSTCTSSSLSPSSEEAASTAEELSE 187

Query: 190 IVELPSLGTSYETPELGTEFVFVDPVEGWLYSYPWYHRVNNVDQL---QDYEFISDFEPF 216
           IVELPSL TSY+  E  +EFV+VD    +  S PWY  +NN        D   IS  EPF
Sbjct: 188 IVELPSLETSYD--ESLSEFVYVD--SAYPPSSPWY--INNCYSFYYHSDENGISMAEPF 238

[Close]

BLAST of Sed0012618 vs. TAIR 10
Match: AT3G16280.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 164.9 bits (416), Expect = 7.4e-41
Identity = 104/210 (49.52%), Postives = 134/210 (63.81%), Query Frame = 0


Query: 12  LNSSPSP-SEENDRSRAAMPVGS----------NQNRVKRSRENSSS------HHPVFRG 71
           LNSS SP S  +D+S A     +          N N  KR R++SS+       HPV+RG
Sbjct: 4   LNSSASPTSSSSDQSDATTTTSTHLSEEEAPPRNNNTRKRRRDSSSASSSSSMQHPVYRG 63

Query: 72  VRMRAWGKWVSEIREPRKKSRIWLGTFSTAEMAARAHDVAALTIKGNAAILNFPQLADRF 131
           VRMR+WGKWVSEIR+PRKK+RIWLGTF TA+MAARAHDVAALTIKG++A+LNFP+LA  F
Sbjct: 64  VRMRSWGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFPELASLF 123

Query: 132 PRPASNSPRDVQAAAAKAASMEI---------ATPPPPSPPSS--------SEELSEIVE 186
           PRPAS+SP D+Q AAA+AA+M +         A   PPS  SS         E L +IVE
Sbjct: 124 PRPASSSPHDIQTAAAEAAAMVVEEKLLEKDEAPEAPPSSESSYVAAESEDEERLEKIVE 183

[Close]

BLAST of Sed0012618 vs. TAIR 10
Match: AT4G32800.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 147.5 bits (371), Expect = 1.2e-35
Identity = 93/188 (49.47%), Postives = 109/188 (57.98%), Query Frame = 0


Query: 39  KRSRENSSSHHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTAEMAARAHDVAALTI 98
           K  +EN+    PV+RGVRMR+WGKWVSEIREPRKKSRIWLGTF TAEMA RAHDVAA++I
Sbjct: 8   KEKKENNK--QPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSI 67

Query: 99  KGNAAILNFPQLADRFPRPASNSPRDVQAAAAKAASMEIATPPPPSPPSSSE-------- 158
           KG +AILNFP+L+   PRP S SPRDV+AAA KAA M+  T    S   +SE        
Sbjct: 68  KGTSAILNFPELSKLLPRPVSLSPRDVRAAATKAALMDFDTTAFRSDTETSETTTSNKMS 127

Query: 159 -----------------------------ELSEIVELPSLGTSYETPELGTEFVFVDPVE 190
                                        +L EIV+LPSLGTS        EFV  D +E
Sbjct: 128 ESSESNETVSFSSSSWSSVTSIEESTVSDDLDEIVKLPSLGTSLNE---SNEFVIFDSLE 187

The following BLAST results are available for this feature:

BLAST of Sed0012618 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023531433.1	3.4e-72	68.67	dehydration-responsive element-binding protein 3-like [Cucurbita pepo subsp. pep...	[more]
XP_022973678.1	5.8e-72	66.67	ethylene-responsive transcription factor TINY-like [Cucurbita maxima]	[more]
XP_022961344.1	7.6e-72	69.40	dehydration-responsive element-binding protein 3-like [Cucurbita moschata]	[more]
KAG7023608.1	1.3e-71	72.90	Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperm...	[more]
XP_022987846.1	2.9e-71	68.56	dehydration-responsive element-binding protein 3-like [Cucurbita maxima]	[more]

BLAST of Sed0012618 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LYD3	5.7e-46	57.14	Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q39127	5.5e-41	52.60	Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN...	[more]
O80654	6.1e-40	47.54	Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LU18	1.0e-39	49.52	Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9M080	1.7e-34	49.47	Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Sed0012618 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IDV7	2.8e-72	66.67	ethylene-responsive transcription factor TINY-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1HDR9	3.7e-72	69.40	dehydration-responsive element-binding protein 3-like OS=Cucurbita moschata OX=3...	[more]
A0A6J1JFH6	1.4e-71	68.56	dehydration-responsive element-binding protein 3-like OS=Cucurbita maxima OX=366...	[more]
A0A6J1EZ61	1.4e-71	66.80	ethylene-responsive transcription factor TINY-like OS=Cucurbita moschata OX=3662...	[more]
A0A0A0LWW4	1.9e-68	65.11	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G364460 PE=...	[more]

BLAST of Sed0012618 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11590.1	4.0e-47	57.14	Integrase-type DNA-binding superfamily protein	[more]
AT5G25810.1	3.9e-42	52.60	Integrase-type DNA-binding superfamily protein	[more]
AT1G77200.1	4.3e-41	47.54	Integrase-type DNA-binding superfamily protein	[more]
AT3G16280.1	7.4e-41	49.52	Integrase-type DNA-binding superfamily protein	[more]
AT4G32800.1	1.2e-35	49.47	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 52..63 score: 64.39 coord: 74..90 score: 69.73
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 51..114 e-value: 6.5E-34 score: 128.7
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 50..100 e-value: 1.9E-13 score: 50.4
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 51..108 score: 22.68173
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 52..108 e-value: 1.03567E-30 score: 105.817
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 51..109 e-value: 4.9E-24 score: 86.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..50
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 18..197
None	No IPR available	PANTHER	PTHR31985:SF177	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE	coord: 18..197
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 51..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012618.1	Sed0012618.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity