Sed0012510 (gene) Chayote v1

Overview


Name	Sed0012510
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Photosystem II CP47 reaction center protein
Location	LG13: 18452175 .. 18453509 (-)
RNA-Seq Expression	Sed0012510
Synteny	Sed0012510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTGCCTTGGTATCGTGTTCATACCGTTGTATTGAATGATCCCGGTCGTTTGCTTTCTGTTCATATAATGCATACAGCTCTAGTTGCTGGTTGGGCCGGTTCAATGGCCCTATACGAATTAGCTGTTTTTGATCCCTCTGATCCTGTTCTTGATCCAATGTGGAGACAAGGTATGTTCGTTATCCCCTTCATGACTCGTTTAGGAATAACCAATTCATGGGGGGGTTGGAGTATCACAGGAGGGACTATAACGAATCCGGGTATTTGGAGTTACGAAGGTGTGGCCGGAGCACATATTGTGTTTTCTGGATTGTGCTTTAGCAGCTATCTGGCATTGGGTCTATTGGGATCTAGAAATATTTTGTGATGAACGTACAGGAAAACCTTCTTTGGATTTGCTGAAGATTTTTGGAATTCATTTATTTCTCTCAGGGTTGGCTTGCTTCGGTTTTGGCGCATTTCATGTAACAGGATTGTATGGTCCGGGAATATGGGTATCCGATCCTTATGGATTAACCGGAAGGGTACAAGCTGTAAATCCTGCGTGGGGTGTCGAAGGGTTTGATCCTTTGTTCCGGGTGGAATAGCCTCTCATCATATTGCAGCAGGTACATTGGGCATATTAGCGGGCCTATTCCATCTTAGTGTTCGTCCGCCCCAACGTCTATACAAAGGATTACGTATGGGAAATATTGAAACCGTCCTTTCGAGTAGTATCGCTGCTGTCTTTTTTGCAGCTTTTGTTGTTGCTGGAACTATGTGGTATGGTTCAGCAACTACCCCGATTGAATTATTTGGGCCCACTCGTTATCAATGGGATCGGGGATACTTCCAGCAAGAAATATATCGAAGAGTTAGTGCCGGGCTAGCCGAAAATCTAAGTTTATCAGAAGCTTGGTCTAAAATTCCTGAAAAATTCGCTTTTTATGATTACATCGGGAATAATCCCGCAAAAGGTGGATTATTCAGAGCGGGTTCCATGGACAACGGGGATGGAATAGCTGTTGGGTGGTTAGGACACCCTGTTTTTAGAGATAAAGAAGGGCGCGAACTTTTTGTACGCCGTATGCCGACCTTTTTTGAAACATTTCCGGTTGTTTTAGTAGACGGAGACGGAATTGTTAGAGCCGATGTTCCTTTTCGAAGAGCAGAATCGAAGTATAGTGTTGAACAGGTCGGTGTAACTGTTGAGTTCTATGGCGGTGAACTCAATGGAGTCAGTTATAGTGATCCTGCAACTGTGAAAAATATGCTAGACGTCTTAGTCTCGACTCTAGGAATAATTTTTTTCGCTATCTTTTTCGCGAACCGCCTAAAGTTCCAAATCTAA

mRNA sequence

ATGGGTTTGCCTTGGTATCGTGTTCATACCGTTGTATTGAATGATCCCGGTCGTTTGCTTTCTGTTCATATAATGCATACAGCTCTAGTTGCTGGTTGGGCCGGTTCAATGGCCCTATACGAATTAGCTGTTTTTGATCCCTCTGATCCTGTTCTTGATCCAATGTGGAGACAAGGTATGTTCGTTATCCCCTTCATGACTCGTTTAGGAATAACCAATTCATGGGGGGGTTGGAGTATCACAGGAGGGACTATAACGAATCCGGGTATTTGGAGTTACGAAGAAATATTTTGTGATGAACGTACAGGAAAACCTTCTTTGGATTTGCTGAAGATTTTTGGAATTCATTTATTTCTCTCAGGGTTGGCTTGCTTCGGTTTTGGCGCATTTCATGTAACAGGATTGTATGGTCCGGGAATATGGGTATCCGATCCTTATGGATTAACCGGAAGGGTACAAGCTGTAAATCCTGCGTGGGGTGTCGAAGGTGTTCGTCCGCCCCAACGTCTATACAAAGGATTACGTATGGGAAATATTGAAACCGTCCTTTCGAGTAGTATCGCTGCTGTCTTTTTTGCAGCTTTTGTTGTTGCTGGAACTATGTGGTATGGTTCAGCAACTACCCCGATTGAATTATTTGGGCCCACTCGTTATCAATGGGATCGGGGATACTTCCAGCAAGAAATATATCGAAGAGTTAGTGCCGGGCTAGCCGAAAATCTAAGTTTATCAGAAGCTTGGTCTAAAATTCCTGAAAAATTCGCTTTTTATGATTACATCGGGAATAATCCCGCAAAAGGTGGATTATTCAGAGCGGGTTCCATGGACAACGGGGATGGAATAGCTGTTGGGTGGTTAGGACACCCTGTTTTTAGAGATAAAGAAGGGCGCGAACTTTTTGTACGCCGTATGCCGACCTTTTTTGAAACATTTCCGGTTGTTTTAGTAGACGGAGACGGAATTGTTAGAGCCGATGTTCCTTTTCGAAGAGCAGAATCGAAGTATAGTGTTGAACAGGTCGGTGTAACTGTTGAGTTCTATGGCGGTGAACTCAATGGAGTCAGTTATAGTGATCCTGCAACTGTGAAAAATATGCTAGACGTCTTAGTCTCGACTCTAGGAATAATTTTTTTCGCTATCTTTTTCGCGAACCGCCTAAAGTTCCAAATCTAA

Coding sequence (CDS)

ATGGGTTTGCCTTGGTATCGTGTTCATACCGTTGTATTGAATGATCCCGGTCGTTTGCTTTCTGTTCATATAATGCATACAGCTCTAGTTGCTGGTTGGGCCGGTTCAATGGCCCTATACGAATTAGCTGTTTTTGATCCCTCTGATCCTGTTCTTGATCCAATGTGGAGACAAGGTATGTTCGTTATCCCCTTCATGACTCGTTTAGGAATAACCAATTCATGGGGGGGTTGGAGTATCACAGGAGGGACTATAACGAATCCGGGTATTTGGAGTTACGAAGAAATATTTTGTGATGAACGTACAGGAAAACCTTCTTTGGATTTGCTGAAGATTTTTGGAATTCATTTATTTCTCTCAGGGTTGGCTTGCTTCGGTTTTGGCGCATTTCATGTAACAGGATTGTATGGTCCGGGAATATGGGTATCCGATCCTTATGGATTAACCGGAAGGGTACAAGCTGTAAATCCTGCGTGGGGTGTCGAAGGTGTTCGTCCGCCCCAACGTCTATACAAAGGATTACGTATGGGAAATATTGAAACCGTCCTTTCGAGTAGTATCGCTGCTGTCTTTTTTGCAGCTTTTGTTGTTGCTGGAACTATGTGGTATGGTTCAGCAACTACCCCGATTGAATTATTTGGGCCCACTCGTTATCAATGGGATCGGGGATACTTCCAGCAAGAAATATATCGAAGAGTTAGTGCCGGGCTAGCCGAAAATCTAAGTTTATCAGAAGCTTGGTCTAAAATTCCTGAAAAATTCGCTTTTTATGATTACATCGGGAATAATCCCGCAAAAGGTGGATTATTCAGAGCGGGTTCCATGGACAACGGGGATGGAATAGCTGTTGGGTGGTTAGGACACCCTGTTTTTAGAGATAAAGAAGGGCGCGAACTTTTTGTACGCCGTATGCCGACCTTTTTTGAAACATTTCCGGTTGTTTTAGTAGACGGAGACGGAATTGTTAGAGCCGATGTTCCTTTTCGAAGAGCAGAATCGAAGTATAGTGTTGAACAGGTCGGTGTAACTGTTGAGTTCTATGGCGGTGAACTCAATGGAGTCAGTTATAGTGATCCTGCAACTGTGAAAAATATGCTAGACGTCTTAGTCTCGACTCTAGGAATAATTTTTTTCGCTATCTTTTTCGCGAACCGCCTAAAGTTCCAAATCTAA

Protein sequence

MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEEIFCDERTGKPSLDLLKIFGIHLFLSGLACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDRGYFQQEIYRRVSAGLAENLSLSEAWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKNMLDVLVSTLGIIFFAIFFANRLKFQI

Homology

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BLAST of Sed0012510 vs. NCBI nr
Match: QHN82488.1 (Photosystem II CP47 reaction center protein [Arachis hypogaea])

HSP 1 Score: 728.4 bits (1879), Expect = 3.3e-206
Identity = 358/424 (84.43%), Postives = 364/424 (85.85%), Query Frame = 0


Query: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYE-------------------------- 120
           FVIPFMTRLGITNSWGGWSITGGT  NPGIWSYE                          
Sbjct: 61  FVIPFMTRLGITNSWGGWSITGGTTPNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 121 EIFCDERTGKPSLDLLKIFGIHLFLSGLACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180
           EIFCDERTGKPSLDL KIFGIHLFL+G+ACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQ+
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQS 180

Query: 181 VNPAWGVEG-----------------------------VRPPQRLYKGLRMGNIETVLSS 240
           VNPAWGVEG                             VRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDRGYFQQEIYRRVSAGLAENLSLSE 300
           SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWD+GYFQQEIYRRVSAGLAEN SLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300

Query: 301 AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
           AWSKIPEK AFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHP+FRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360

Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKNM 370
           TFFETFPVVL+DGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKNM
Sbjct: 361 TFFETFPVVLIDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKNM 420

[Close]

BLAST of Sed0012510 vs. NCBI nr
Match: YP_009317412.1 (photosystem II 47 kDa protein [Coccinia grandis] >YP_009326015.1 photosystem II 47 kDa protein [Citrullus lanatus] >YP_009348057.1 photosystem II 47 kDa protein [Citrullus mucosospermus] >YP_009420820.1 photosystem II 47 kDa protein [Citrullus colocynthis] >YP_009431583.1 photosystem II 47 kDa protein [Citrullus amarus] >YP_009431668.1 photosystem II 47 kDa protein [Citrullus rehmii] >YP_009447476.1 photosystem II 47 kDa protein [Cucurbita maxima] >YP_009447561.1 photosystem II 47 kDa protein [Cucurbita moschata] >YP_009456172.1 photosystem II 47 kDa protein [Lagenaria siceraria] >YP_009505106.1 photosystem II 47 kDa protein [Cucurbita pepo] >YP_009560861.1 PsbB [Trichosanthes kirilowii] >YP_009752016.1 photosystem II 47 kDa protein [Cionosicys macranthus] >YP_009752353.1 photosystem II 47 kDa protein [Bryonia marmorata] >YP_009753115.1 photosystem II 47 kDa protein [Corallocarpus boehmii] >YP_009753284.1 photosystem II 47 kDa protein [Nothoalsomitra suberosa] >YP_009753731.1 photosystem II 47 kDa protein [Trichosanthes nervifolia] >YP_010131120.1 photosystem II CP47 chlorophyll apoprotein [Benincasa hispida] >ALO21734.1 PsbB [Cucurbita argyrosperma] >ALO21777.1 PsbB [Cucurbita argyrosperma var. palmeri] >ALO21951.1 PsbB [Cucurbita cordata] >ALO21984.1 PsbB [Cucurbita digitata] >ALO22039.1 PsbB [Cucurbita ecuadorensis] >ALO22131.1 PsbB [Cucurbita ficifolia] >ALO22240.1 PsbB [Cucurbita lundelliana] >ALO22341.1 PsbB [Cucurbita maxima subsp. andreana] >ALO22460.1 PsbB [Cucurbita okeechobeensis] >ALO22533.1 PsbB [Cucurbita okeechobeensis subsp. martinezii] >ALO22583.1 PsbB [Cucurbita pepo subsp. fraterna] >ALO22664.1 PsbB [Cucurbita pepo subsp. ovifera] >ALO22701.1 PsbB [Cucurbita pepo var. ozarkana] >ALO22751.1 PsbB [Cucurbita pepo subsp. pepo] >ALO22801.1 PsbB [Cucurbita pepo var. texana] >ALO22876.1 PsbB [Cucurbita pedatifolia] >APW82488.1 photosystem II 47 kDa protein [Citrullus lanatus subsp. vulgaris] >QIT04076.1 photosystem II 47 kDa protein [Luffa aegyptiaca] >QKX48500.1 photosystem II CP47 chlorophyll apoprotein [Luffa acutangula] >QNM38557.1 photosystem II CP47 chlorophyll apoprotein [Lagenaria siceraria var. microcarpa] >QZL38619.1 photosystem II 47 kDa protein [Citrullus naudinianus] >QZL38707.1 photosystem II 47 kDa protein [Citrullus ecirrhosus])

HSP 1 Score: 724.5 bits (1869), Expect = 4.7e-205
Identity = 358/418 (85.65%), Postives = 359/418 (85.89%), Query Frame = 0


Query: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYE-------------------------- 120
           FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYE                          
Sbjct: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 121 EIFCDERTGKPSLDLLKIFGIHLFLSGLACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180
           EIFCDERTGKPSLDL KIFGIHLFLSGL CFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180

Query: 181 VNPAWGVEG-----------------------------VRPPQRLYKGLRMGNIETVLSS 240
           VNPAWGVEG                             VRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDRGYFQQEIYRRVSAGLAENLSLSE 300
           SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWD+GYFQQEIYRRVSAGLAEN SLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300

Query: 301 AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
           AWSKIPEK AFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360

Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK 364
           TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK 418

[Close]

BLAST of Sed0012510 vs. NCBI nr
Match: YP_009752101.1 (photosystem II 47 kDa protein [Dendrosicyos socotranus] >YP_009752184.1 photosystem II 47 kDa protein [Linnaeosicyos amara] >QIT05511.1 photosystem II 47 kDa protein [Dendrosicyos socotranus] >QIT05594.1 photosystem II 47 kDa protein [Linnaeosicyos amara])

HSP 1 Score: 724.5 bits (1869), Expect = 4.7e-205
Identity = 358/418 (85.65%), Postives = 359/418 (85.89%), Query Frame = 0


Query: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYE-------------------------- 120
           FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYE                          
Sbjct: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 121 EIFCDERTGKPSLDLLKIFGIHLFLSGLACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180
           EIFCDERTGKPSLDL KIFGIHLFLSGL CFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180

Query: 181 VNPAWGVEG-----------------------------VRPPQRLYKGLRMGNIETVLSS 240
           VNPAWGVEG                             VRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDRGYFQQEIYRRVSAGLAENLSLSE 300
           SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWD+GYFQQEIYRRVSAGLAEN SLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENKSLSE 300

Query: 301 AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
           AWSKIPEK AFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360

Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK 364
           TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK 418

[Close]

BLAST of Sed0012510 vs. NCBI nr
Match: ALO21850.1 (PsbB [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 724.2 bits (1868), Expect = 6.1e-205
Identity = 357/418 (85.41%), Postives = 359/418 (85.89%), Query Frame = 0


Query: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYE-------------------------- 120
           FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYE                          
Sbjct: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 121 EIFCDERTGKPSLDLLKIFGIHLFLSGLACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180
           EIFCDERTGKPSLDL KIFGIHLFLSGL CFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180

Query: 181 VNPAWGVEG-----------------------------VRPPQRLYKGLRMGNIETVLSS 240
           VNPAWGVEG                             VRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDRGYFQQEIYRRVSAGLAENLSLSE 300
           SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWD+GYFQQEIYRRVSAGLAEN SLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300

Query: 301 AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
           AWSKIPEK AFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHP+FRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360

Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK 364
           TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK 418

[Close]

BLAST of Sed0012510 vs. NCBI nr
Match: YP_009751848.1 (photosystem II 47 kDa protein [Indofevillea khasiana] >QIT04581.1 photosystem II 47 kDa protein [Indofevillea khasiana] >QJS52322.1 photosystem II CP47 chlorophyll apoprotein [Indofevillea khasiana])

HSP 1 Score: 724.2 bits (1868), Expect = 6.1e-205
Identity = 357/418 (85.41%), Postives = 359/418 (85.89%), Query Frame = 0


Query: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYE-------------------------- 120
           FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYE                          
Sbjct: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 121 EIFCDERTGKPSLDLLKIFGIHLFLSGLACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180
           EIFCDERTGKPSLDL KIFGIHLFLSGLACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180

Query: 181 VNPAWGVEG-----------------------------VRPPQRLYKGLRMGNIETVLSS 240
           VNPAWGVEG                             VRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDRGYFQQEIYRRVSAGLAENLSLSE 300
           SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWD+GYFQQEIYRRV AGLAEN SLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSE 300

Query: 301 AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
           AWSKIPEK AFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHP+FRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360

Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK 364
           TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK 418

[Close]

BLAST of Sed0012510 vs. ExPASy Swiss-Prot
Match: Q09WZ1 (Photosystem II CP47 reaction center protein OS=Morus indica OX=248361 GN=psbB PE=3 SV=1)

HSP 1 Score: 722.6 bits (1864), Expect = 2.3e-207
Identity = 355/418 (84.93%), Postives = 360/418 (86.12%), Query Frame = 0


Query: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
           MGLPWYRVHTVVLNDPGRL+SVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLISVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYE-------------------------- 120
           FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYE                          
Sbjct: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 121 EIFCDERTGKPSLDLLKIFGIHLFLSGLACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180
           EIFCDERTGKPSLDL KIFGIHLFLSG+ACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180

Query: 181 VNPAWGVEG-----------------------------VRPPQRLYKGLRMGNIETVLSS 240
           VNPAWGVEG                             VRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDRGYFQQEIYRRVSAGLAENLSLSE 300
           SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWD+GYFQQEIYRRVSAGLAEN SLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENKSLSE 300

Query: 301 AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
           AWSKIPEK AFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHP+FRDKEGREL+VRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELYVRRMP 360

Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK 364
           TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK 418

[Close]

BLAST of Sed0012510 vs. ExPASy Swiss-Prot
Match: A9LYC6 (Photosystem II CP47 reaction center protein OS=Acorus americanus OX=263995 GN=psbB PE=3 SV=1)

HSP 1 Score: 721.1 bits (1860), Expect = 6.8e-207
Identity = 355/418 (84.93%), Postives = 358/418 (85.65%), Query Frame = 0


Query: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYE-------------------------- 120
           FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYE                          
Sbjct: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 121 EIFCDERTGKPSLDLLKIFGIHLFLSGLACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180
           EIFCDERTGKPSLDL KIFGIHLFLSG+ACFGFGAFHVTGLYGPGIWVSDPYGLTG+VQ 
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQP 180

Query: 181 VNPAWGVEG-----------------------------VRPPQRLYKGLRMGNIETVLSS 240
           VNPAWG EG                             VRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDRGYFQQEIYRRVSAGLAENLSLSE 300
           SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWD+GYFQQEIYRRV AGLAENLSLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENLSLSE 300

Query: 301 AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
           AWSKIPEK AFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360

Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK 364
           TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK 418

[Close]

BLAST of Sed0012510 vs. ExPASy Swiss-Prot
Match: Q3V508 (Photosystem II CP47 reaction center protein OS=Acorus calamus OX=4465 GN=psbB PE=3 SV=1)

HSP 1 Score: 721.1 bits (1860), Expect = 6.8e-207
Identity = 355/418 (84.93%), Postives = 358/418 (85.65%), Query Frame = 0


Query: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYE-------------------------- 120
           FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYE                          
Sbjct: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 121 EIFCDERTGKPSLDLLKIFGIHLFLSGLACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180
           EIFCDERTGKPSLDL KIFGIHLFLSG+ACFGFGAFHVTGLYGPGIWVSDPYGLTG+VQ 
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQP 180

Query: 181 VNPAWGVEG-----------------------------VRPPQRLYKGLRMGNIETVLSS 240
           VNPAWG EG                             VRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDRGYFQQEIYRRVSAGLAENLSLSE 300
           SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWD+GYFQQEIYRRV AGLAENLSLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENLSLSE 300

Query: 301 AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
           AWSKIPEK AFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360

Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK 364
           TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK 418

[Close]

BLAST of Sed0012510 vs. ExPASy Swiss-Prot
Match: Q7FNS4 (Photosystem II CP47 reaction center protein OS=Atropa belladonna OX=33113 GN=psbB PE=3 SV=1)

HSP 1 Score: 721.1 bits (1860), Expect = 6.8e-207
Identity = 354/418 (84.69%), Postives = 359/418 (85.89%), Query Frame = 0


Query: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYE-------------------------- 120
           FVIPFMTRLGITNSWGGWSITGGT+TNPGIWSYE                          
Sbjct: 61  FVIPFMTRLGITNSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 121 EIFCDERTGKPSLDLLKIFGIHLFLSGLACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180
           EIFCDERTGKPSLDL KIFGIHLFLSG+ACFGFGAFHVTGLYGPGIWVSDPYGLTG+VQ 
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQP 180

Query: 181 VNPAWGVEG-----------------------------VRPPQRLYKGLRMGNIETVLSS 240
           VNPAWGVEG                             VRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDRGYFQQEIYRRVSAGLAENLSLSE 300
           SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWD+GYFQQEIYRRVSAGLAEN SLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300

Query: 301 AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
           AWSKIPEK AFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHP+FRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360

Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK 364
           TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK 418

[Close]

BLAST of Sed0012510 vs. ExPASy Swiss-Prot
Match: Q3C1K3 (Photosystem II CP47 reaction center protein OS=Nicotiana sylvestris OX=4096 GN=psbB PE=3 SV=1)

HSP 1 Score: 721.1 bits (1860), Expect = 6.8e-207
Identity = 354/418 (84.69%), Postives = 359/418 (85.89%), Query Frame = 0


Query: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYE-------------------------- 120
           FVIPFMTRLGITNSWGGWSITGGT+TNPGIWSYE                          
Sbjct: 61  FVIPFMTRLGITNSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 121 EIFCDERTGKPSLDLLKIFGIHLFLSGLACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180
           EIFCDERTGKPSLDL KIFGIHLFLSG+ACFGFGAFHVTGLYGPGIWVSDPYGLTG+VQ 
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQP 180

Query: 181 VNPAWGVEG-----------------------------VRPPQRLYKGLRMGNIETVLSS 240
           VNPAWGVEG                             VRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDRGYFQQEIYRRVSAGLAENLSLSE 300
           SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWD+GYFQQEIYRRVSAGLAEN SLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300

Query: 301 AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
           AWSKIPEK AFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHP+FRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360

Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK 364
           TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK 418

[Close]

BLAST of Sed0012510 vs. ExPASy TrEMBL
Match: A0A1P8LE33 (Photosystem II CP47 reaction center protein OS=Citrullus mucosospermus OX=519315 GN=psbB PE=3 SV=1)

HSP 1 Score: 724.5 bits (1869), Expect = 2.3e-205
Identity = 358/418 (85.65%), Postives = 359/418 (85.89%), Query Frame = 0


Query: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYE-------------------------- 120
           FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYE                          
Sbjct: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 121 EIFCDERTGKPSLDLLKIFGIHLFLSGLACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180
           EIFCDERTGKPSLDL KIFGIHLFLSGL CFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180

Query: 181 VNPAWGVEG-----------------------------VRPPQRLYKGLRMGNIETVLSS 240
           VNPAWGVEG                             VRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDRGYFQQEIYRRVSAGLAENLSLSE 300
           SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWD+GYFQQEIYRRVSAGLAEN SLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300

Query: 301 AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
           AWSKIPEK AFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360

Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK 364
           TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK 418

[Close]

BLAST of Sed0012510 vs. ExPASy TrEMBL
Match: A0A2Z2CGC0 (Photosystem II CP47 reaction center protein OS=Coccinia grandis OX=387127 GN=psbB PE=3 SV=1)

HSP 1 Score: 724.5 bits (1869), Expect = 2.3e-205
Identity = 358/418 (85.65%), Postives = 359/418 (85.89%), Query Frame = 0


Query: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYE-------------------------- 120
           FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYE                          
Sbjct: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 121 EIFCDERTGKPSLDLLKIFGIHLFLSGLACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180
           EIFCDERTGKPSLDL KIFGIHLFLSGL CFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180

Query: 181 VNPAWGVEG-----------------------------VRPPQRLYKGLRMGNIETVLSS 240
           VNPAWGVEG                             VRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDRGYFQQEIYRRVSAGLAENLSLSE 300
           SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWD+GYFQQEIYRRVSAGLAEN SLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300

Query: 301 AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
           AWSKIPEK AFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360

Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK 364
           TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK 418

[Close]

BLAST of Sed0012510 vs. ExPASy TrEMBL
Match: X2F2N4 (Photosystem II CP47 reaction center protein OS=Lagenaria siceraria OX=3668 GN=psbB PE=3 SV=1)

HSP 1 Score: 724.5 bits (1869), Expect = 2.3e-205
Identity = 358/418 (85.65%), Postives = 359/418 (85.89%), Query Frame = 0


Query: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYE-------------------------- 120
           FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYE                          
Sbjct: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 121 EIFCDERTGKPSLDLLKIFGIHLFLSGLACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180
           EIFCDERTGKPSLDL KIFGIHLFLSGL CFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180

Query: 181 VNPAWGVEG-----------------------------VRPPQRLYKGLRMGNIETVLSS 240
           VNPAWGVEG                             VRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDRGYFQQEIYRRVSAGLAENLSLSE 300
           SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWD+GYFQQEIYRRVSAGLAEN SLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300

Query: 301 AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
           AWSKIPEK AFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360

Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK 364
           TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK 418

[Close]

BLAST of Sed0012510 vs. ExPASy TrEMBL
Match: A0A0S2IFN4 (Photosystem II CP47 reaction center protein OS=Cucurbita moschata OX=3662 GN=psbB PE=3 SV=1)

HSP 1 Score: 724.5 bits (1869), Expect = 2.3e-205
Identity = 358/418 (85.65%), Postives = 359/418 (85.89%), Query Frame = 0


Query: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYE-------------------------- 120
           FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYE                          
Sbjct: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 121 EIFCDERTGKPSLDLLKIFGIHLFLSGLACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180
           EIFCDERTGKPSLDL KIFGIHLFLSGL CFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180

Query: 181 VNPAWGVEG-----------------------------VRPPQRLYKGLRMGNIETVLSS 240
           VNPAWGVEG                             VRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDRGYFQQEIYRRVSAGLAENLSLSE 300
           SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWD+GYFQQEIYRRVSAGLAEN SLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300

Query: 301 AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
           AWSKIPEK AFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360

Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK 364
           TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK 418

[Close]

BLAST of Sed0012510 vs. ExPASy TrEMBL
Match: A0A6H0ERT8 (Photosystem II CP47 reaction center protein OS=Luffa aegyptiaca OX=3670 GN=psbB PE=3 SV=1)

HSP 1 Score: 724.5 bits (1869), Expect = 2.3e-205
Identity = 358/418 (85.65%), Postives = 359/418 (85.89%), Query Frame = 0


Query: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYE-------------------------- 120
           FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYE                          
Sbjct: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 121 EIFCDERTGKPSLDLLKIFGIHLFLSGLACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180
           EIFCDERTGKPSLDL KIFGIHLFLSGL CFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180

Query: 181 VNPAWGVEG-----------------------------VRPPQRLYKGLRMGNIETVLSS 240
           VNPAWGVEG                             VRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDRGYFQQEIYRRVSAGLAENLSLSE 300
           SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWD+GYFQQEIYRRVSAGLAEN SLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300

Query: 301 AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
           AWSKIPEK AFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360

Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK 364
           TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK 418

[Close]

BLAST of Sed0012510 vs. TAIR 10
Match: ATCG00680.1 (photosystem II reaction center protein B )

HSP 1 Score: 715.7 bits (1846), Expect = 2.0e-206
Identity = 351/418 (83.97%), Postives = 359/418 (85.89%), Query Frame = 0


Query: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
           MGLPWYRVHTVVLNDPGRLL+VHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYE-------------------------- 120
           FVIPFMTRLGITNSWGGW+ITGGTITNPG+WSYE                          
Sbjct: 61  FVIPFMTRLGITNSWGGWNITGGTITNPGLWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 121 EIFCDERTGKPSLDLLKIFGIHLFLSGLACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180
           EIFCDERTGKPSLDL KIFGIHLFLSG+ACFGFGAFHVTGLYGPGIWVSDPYGLTG+VQ 
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQP 180

Query: 181 VNPAWGVEG-----------------------------VRPPQRLYKGLRMGNIETVLSS 240
           VNPAWGVEG                             VRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDRGYFQQEIYRRVSAGLAENLSLSE 300
           SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWD+GYFQQEIYRRVSAGLAEN SLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300

Query: 301 AWSKIPEKFAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
           AW+KIPEK AFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFR+KEGRELFVRRMP
Sbjct: 301 AWAKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRNKEGRELFVRRMP 360

Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK 364
           TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVK 418

[Close]

BLAST of Sed0012510 vs. TAIR 10
Match: ATCG00280.1 (photosystem II reaction center protein C )

HSP 1 Score: 67.4 bits (163), Expect = 2.9e-11
Identity = 66/278 (23.74%), Postives = 106/278 (38.13%), Query Frame = 0


Query: 2   GLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMF 61
           G  W+  +  ++N  G+LL  H+ H  L+  WAG+M L+E+A F P      PM+ QG+ 
Sbjct: 32  GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 91

Query: 62  VIPFMTRLGITNSWGG--------------WSITGGTITNPGIW-------SYEEIF-CD 121
           ++P +  LG     GG                I+   +   GI+       + EE F   
Sbjct: 92  LLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFF 151

Query: 122 ERTGKPSLDLLKIFGIHLFLSGLACF--GFGAFHVTGLYGP------------------- 181
               K    +  I GIHL L G+  F   F A +  G+Y                     
Sbjct: 152 GYVWKDRNKMTTILGIHLILLGVGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPS 211

Query: 182 ---GIWVSDPYGLTGRVQAVNPAWGVEG-----------------VRPPQRLYKGLRMGN 217
              G  +  P+G  G + +V+    + G                 +  P    +   + +
Sbjct: 212 VIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICIFGGIWHILTKPFAWARRALVWS 271

The following BLAST results are available for this feature:

BLAST of Sed0012510 vs. NCBI nr


Match Name	E-value	Identity	Description
QHN82488.1	3.3e-206	84.43	Photosystem II CP47 reaction center protein [Arachis hypogaea]	[more]
YP_009317412.1	4.7e-205	85.65	photosystem II 47 kDa protein [Coccinia grandis] >YP_009326015.1 photosystem II ...	[more]
YP_009752101.1	4.7e-205	85.65	photosystem II 47 kDa protein [Dendrosicyos socotranus] >YP_009752184.1 photosys...	[more]
ALO21850.1	6.1e-205	85.41	PsbB [Cucurbita argyrosperma subsp. sororia]	[more]
YP_009751848.1	6.1e-205	85.41	photosystem II 47 kDa protein [Indofevillea khasiana] >QIT04581.1 photosystem II...	[more]

BLAST of Sed0012510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q09WZ1	2.3e-207	84.93	Photosystem II CP47 reaction center protein OS=Morus indica OX=248361 GN=psbB PE...	[more]
A9LYC6	6.8e-207	84.93	Photosystem II CP47 reaction center protein OS=Acorus americanus OX=263995 GN=ps...	[more]
Q3V508	6.8e-207	84.93	Photosystem II CP47 reaction center protein OS=Acorus calamus OX=4465 GN=psbB PE...	[more]
Q7FNS4	6.8e-207	84.69	Photosystem II CP47 reaction center protein OS=Atropa belladonna OX=33113 GN=psb...	[more]
Q3C1K3	6.8e-207	84.69	Photosystem II CP47 reaction center protein OS=Nicotiana sylvestris OX=4096 GN=p...	[more]

BLAST of Sed0012510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1P8LE33	2.3e-205	85.65	Photosystem II CP47 reaction center protein OS=Citrullus mucosospermus OX=519315...	[more]
A0A2Z2CGC0	2.3e-205	85.65	Photosystem II CP47 reaction center protein OS=Coccinia grandis OX=387127 GN=psb...	[more]
X2F2N4	2.3e-205	85.65	Photosystem II CP47 reaction center protein OS=Lagenaria siceraria OX=3668 GN=ps...	[more]
A0A0S2IFN4	2.3e-205	85.65	Photosystem II CP47 reaction center protein OS=Cucurbita moschata OX=3662 GN=psb...	[more]
A0A6H0ERT8	2.3e-205	85.65	Photosystem II CP47 reaction center protein OS=Luffa aegyptiaca OX=3670 GN=psbB ...	[more]

BLAST of Sed0012510 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00680.1	2.0e-206	83.97	photosystem II reaction center protein B	[more]
ATCG00280.1	2.9e-11	23.74	photosystem II reaction center protein C	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000932	Photosystem antenna protein-like	PFAM	PF00421	PSII	coord: 95..166 e-value: 1.3E-25 score: 90.1 coord: 1..96 e-value: 2.4E-52 score: 178.3 coord: 164..364 e-value: 1.2E-97 score: 327.8
IPR000932	Photosystem antenna protein-like	PANTHER	PTHR33180	PHOTOSYSTEM II CP43 REACTION CENTER PROTEIN	coord: 1..95
IPR000932	Photosystem antenna protein-like	PANTHER	PTHR33180	PHOTOSYSTEM II CP43 REACTION CENTER PROTEIN	coord: 164..365
IPR000932	Photosystem antenna protein-like	PANTHER	PTHR33180	PHOTOSYSTEM II CP43 REACTION CENTER PROTEIN	coord: 95..166
None	No IPR available	GENE3D	3.10.680.10	Photosystem II CP47 reaction center protein	coord: 217..377 e-value: 1.6E-87 score: 293.4
None	No IPR available	PANTHER	PTHR33180:SF14	PHOTOSYSTEM II CP47 REACTION CENTER PROTEIN	coord: 95..166
None	No IPR available	PANTHER	PTHR33180:SF14	PHOTOSYSTEM II CP47 REACTION CENTER PROTEIN	coord: 164..365
None	No IPR available	PANTHER	PTHR33180:SF14	PHOTOSYSTEM II CP47 REACTION CENTER PROTEIN	coord: 1..95
IPR036001	Photosystem antenna protein-like superfamily	SUPERFAMILY	161077	Photosystem II antenna protein-like	coord: 2..365

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012510.1	Sed0012510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009772	photosynthetic electron transport in photosystem II
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0019684	photosynthesis, light reaction
biological_process	GO:0009767	photosynthetic electron transport chain
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
cellular_component	GO:0009521	photosystem
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity