Sed0012505 (gene) Chayote v1

Overview


Name	Sed0012505
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Beta-1,3-N-Acetylglucosaminyltransferase family protein, putative
Location	LG13: 24967012 .. 24968260 (-)
RNA-Seq Expression	Sed0012505
Synteny	Sed0012505

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACTTCCATCAAGTTTCTTTGTGTACTCTTCTTCTTATCTCTCCTTTCCAAAGGTATGCATAGGGTTAAAATAGTTTGATTGTAAATTCTCAAGTCTTATAATTATTAGGTTTAAACTTTAATATTCCATTTAAAAAAAAACTTTATTTTGTAATTTCCTAAACTTTGCATGAAAAATACTTGTATTTCAGAACTTTTATGCATAAATGTCTACTAAATAAATAAACATAGTAAACGATTTGTTAAGATTGTTAGCTTCAGGTCACAGTGTCACAAAACCTGCAAAATTTAAATCTTTTATCATTTCTATTATTATTTTGAATTGGAAATTGTTCTTTTAATTTCTTCCGTATGTTTCTTACCTACTTTTTATCTTTAATCAAATATATTTTTCTAAAAACATATATAATTTATTAAGAAAAGAACAATCACAACAAAGATATGATAAACTAAACCAATTTTTTCATCAAATTTTAGACGAAGCTTCAATGATAGTAAAAGACGAAGTATAAATTCAACAATTAAAACCGCACTTAAAACTTACATGTCAAACGTGTAACTCATAATTTTTGTTTTGTTTGGAGTACATATTGGGGGGACAAATACCTATTCTCAGAATCAAACCTGTGACGCTGGTGTTGAACATGTTTACAACCAACCAATGAAACTATTGCGACACTGACCCAATCGTTCATAATTTTGTTCTTTAGTTATATGATTAAAATATCATTTTGTGCCTATACTTTAGATTTTGTTCCATTTAATTCTGCTAAAAAAGAAGAAGAAGATTTTGTTCCATTTAAGTTTAATTACTTTAGGGTTTGCTCGACGACTCAAACGAGACTTACCGCCGCGCTTATGTTACGATTCGATCGATTTCAAGCATAATCCATTTTGTTGTTTAATTTGATTATGGTTTTGAATCATTTTCAGGAAATTGTGAATGCACATTGAATGACATTTCAATCAGCCAAACTACAACTGGGTCTGTAGTGAAGGGCAAGCAACAATGGAAAGCAACAATAAAAAACAATTGCATTTGTTCACAATCAAGTTTGAAGCTGAATTGCAATGGATTCAATACAGTTGAGACAGTTGATCAGAGCATTTTAATGGTTGCTGGTGCTGTTTGTTTGGTCAACGGTGGTCAACCCATCTCTGAATCAAACCCCATCTCCTTCACTTATTCTTGGGACAATGCCTTTAATTTCAAGCCTTTCTTCTCACAAATTACTTGTTCTTAA

mRNA sequence

ATGGCTACTTCCATCAAGTTTCTTTGTGTACTCTTCTTCTTATCTCTCCTTTCCAAAGGAAATTGTGAATGCACATTGAATGACATTTCAATCAGCCAAACTACAACTGGGTCTGTAGTGAAGGGCAAGCAACAATGGAAAGCAACAATAAAAAACAATTGCATTTGTTCACAATCAAGTTTGAAGCTGAATTGCAATGGATTCAATACAGTTGAGACAGTTGATCAGAGCATTTTAATGGTTGCTGGTGCTGTTTGTTTGGTCAACGGTGGTCAACCCATCTCTGAATCAAACCCCATCTCCTTCACTTATTCTTGGGACAATGCCTTTAATTTCAAGCCTTTCTTCTCACAAATTACTTGTTCTTAA

Coding sequence (CDS)

ATGGCTACTTCCATCAAGTTTCTTTGTGTACTCTTCTTCTTATCTCTCCTTTCCAAAGGAAATTGTGAATGCACATTGAATGACATTTCAATCAGCCAAACTACAACTGGGTCTGTAGTGAAGGGCAAGCAACAATGGAAAGCAACAATAAAAAACAATTGCATTTGTTCACAATCAAGTTTGAAGCTGAATTGCAATGGATTCAATACAGTTGAGACAGTTGATCAGAGCATTTTAATGGTTGCTGGTGCTGTTTGTTTGGTCAACGGTGGTCAACCCATCTCTGAATCAAACCCCATCTCCTTCACTTATTCTTGGGACAATGCCTTTAATTTCAAGCCTTTCTTCTCACAAATTACTTGTTCTTAA

Protein sequence

MATSIKFLCVLFFLSLLSKGNCECTLNDISISQTTTGSVVKGKQQWKATIKNNCICSQSSLKLNCNGFNTVETVDQSILMVAGAVCLVNGGQPISESNPISFTYSWDNAFNFKPFFSQITCS

Homology

[Close]

BLAST of Sed0012505 vs. NCBI nr
Match: XP_038896903.1 (TPD1 protein homolog 1-like [Benincasa hispida])

HSP 1 Score: 189.1 bits (479), Expect = 2.2e-44
Identity = 86/122 (70.49%), Postives = 104/122 (85.25%), Query Frame = 0


Query: 1   MATSIKFLCVLFFLSLLSKGNCECTLNDISISQTTTGSVVKGKQQWKATIKNNCICSQSS 60
           M  SIKFLCVLFF  LLSKG  +C++NDI+ISQ+TTG  V GKQ+W+ATI NNC+CSQ S
Sbjct: 1   MVASIKFLCVLFFFCLLSKGKSQCSMNDITISQSTTGKEVNGKQEWRATITNNCVCSQYS 60

Query: 61  LKLNCNGFNTVETVDQSILMVAGAVCLVNGGQPISESNPISFTYSWDNAFNFKPFFSQIT 120
           +K +CNGFN+VE VD+SILMVAG+ CLVN GQP+ +SNPISFTY+WDNAF+FKP FSQ+ 
Sbjct: 61  VKFDCNGFNSVEKVDESILMVAGSECLVNNGQPMFKSNPISFTYAWDNAFSFKPLFSQVA 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

[Close]

BLAST of Sed0012505 vs. NCBI nr
Match: KGN60075.1 (hypothetical protein Csa_001952 [Cucumis sativus])

HSP 1 Score: 184.1 bits (466), Expect = 7.2e-43
Identity = 84/122 (68.85%), Postives = 100/122 (81.97%), Query Frame = 0


Query: 1   MATSIKFLCVLFFLSLLSKGNCECTLNDISISQTTTGSVVKGKQQWKATIKNNCICSQSS 60
           M  SI +  +LFF  LLSKGNCEC++NDI ISQ+TTG  V GKQ+W+ATI+N C+CSQ S
Sbjct: 1   MVASINYFYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYS 60

Query: 61  LKLNCNGFNTVETVDQSILMVAGAVCLVNGGQPISESNPISFTYSWDNAFNFKPFFSQIT 120
           +K +CNGFNTVE VD+SILMVAG+VCLVN GQPI  S+PISFTY+WDNAF F P FSQ+ 
Sbjct: 61  VKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPISFTYAWDNAFPFSPLFSQVA 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

[Close]

BLAST of Sed0012505 vs. NCBI nr
Match: XP_030926576.1 (TPD1 protein homolog 1-like [Quercus lobata])

HSP 1 Score: 155.6 bits (392), Expect = 2.7e-34
Identity = 71/122 (58.20%), Postives = 91/122 (74.59%), Query Frame = 0


Query: 1   MATSIKFLCVLFFLSLLSKGNCECTLNDISISQTTTGSVVKGKQQWKATIKNNCICSQSS 60
           MAT IKFLCVLF LS + KGNC+CTL+ ++I Q+ TG VV+ K  W  TI N C+CSQS 
Sbjct: 1   MATFIKFLCVLFVLSFVGKGNCQCTLSQVTIKQSKTGEVVQQKPVWSVTINNGCLCSQSD 60

Query: 61  LKLNCNGFNTVETVDQSILMVAGAVCLVNGGQPISESNPISFTYSWDNAFNFKPFFSQIT 120
           LKL+CNGF TV+ VD S+L  +G  CLVN G P++ S+ +SFTY+WD +F+F+P  SQI 
Sbjct: 61  LKLSCNGFQTVKPVDPSVLSKSGNECLVNNGVPVAPSSSLSFTYAWDTSFSFQPLSSQIN 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

[Close]

BLAST of Sed0012505 vs. NCBI nr
Match: XP_016675584.1 (uncharacterized protein At1g05835-like [Gossypium hirsutum] >KAB2047720.1 hypothetical protein ES319_A13G066500v1 [Gossypium barbadense] >TYG85600.1 hypothetical protein ES288_A13G068300v1 [Gossypium darwinii] >TYH90762.1 hypothetical protein ES332_A13G071300v1 [Gossypium tomentosum] >TYJ00145.1 hypothetical protein E1A91_A13G067800v1 [Gossypium mustelinum] >KAG4165160.1 hypothetical protein ERO13_A13G061900v2 [Gossypium hirsutum])

HSP 1 Score: 154.8 bits (390), Expect = 4.7e-34
Identity = 68/122 (55.74%), Postives = 92/122 (75.41%), Query Frame = 0


Query: 1   MATSIKFLCVLFFLSLLSKGNCECTLNDISISQTTTGSVVKGKQQWKATIKNNCICSQSS 60
           MAT++ F  V+ FL+L+ +G C+CTL D+ I QT TG  V+ K +WKAT+KN+CIC+QS 
Sbjct: 1   MATTLTFFFVVLFLALIGQGYCQCTLADVKIIQTQTGKTVENKPEWKATVKNDCICTQSD 60

Query: 61  LKLNCNGFNTVETVDQSILMVAGAVCLVNGGQPISESNPISFTYSWDNAFNFKPFFSQIT 120
           LKL+C+GF TVE VD S++   GA CL+NGGQP++ S+ +SF Y+WD +F FKP  SQI 
Sbjct: 61  LKLSCDGFQTVEAVDSSLMAKTGAECLINGGQPVASSSNLSFNYAWDTSFPFKPLSSQIN 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

[Close]

BLAST of Sed0012505 vs. NCBI nr
Match: MBA0698815.1 (hypothetical protein [Gossypium aridum] >MBA0815788.1 hypothetical protein [Gossypium harknessii] >TYI45886.1 hypothetical protein E1A91_D13G069600v1 [Gossypium mustelinum])

HSP 1 Score: 152.9 bits (385), Expect = 1.8e-33
Identity = 67/122 (54.92%), Postives = 91/122 (74.59%), Query Frame = 0


Query: 1   MATSIKFLCVLFFLSLLSKGNCECTLNDISISQTTTGSVVKGKQQWKATIKNNCICSQSS 60
           MAT++ F  V+ FL+L+ +G C+CTL D+ I QT TG  V+ K +WKAT+KN+C C+QS 
Sbjct: 1   MATTLTFFFVVLFLALIGQGYCQCTLADVKIIQTQTGKTVENKPEWKATVKNDCTCTQSD 60

Query: 61  LKLNCNGFNTVETVDQSILMVAGAVCLVNGGQPISESNPISFTYSWDNAFNFKPFFSQIT 120
           LKL+C+GF TVE VD S++   GA CL+NGGQP++ S+ +SF Y+WD +F FKP  SQI 
Sbjct: 61  LKLSCDGFQTVEAVDSSLMAKTGAECLINGGQPVASSSNLSFNYAWDTSFPFKPLSSQIN 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

[Close]

BLAST of Sed0012505 vs. ExPASy Swiss-Prot
Match: A8MS78 (Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 PE=2 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 8.9e-04
Identity = 36/130 (27.69%), Postives = 61/130 (46.92%), Query Frame = 0


Query: 1   MATSIKFL----CVLFFLSLLSKGNCECTLNDISISQTTTGSVVKGKQ--QWKATIKNNC 60
           M+  +KFL      L  L + S   CE   ++ ++ QT     VK ++  +++  + N C
Sbjct: 1   MSKPLKFLLWSSLALLLLQIGSGAICEGKSSEPAVRQTQ----VKWREGKKFRVEVMNKC 60

Query: 61  -ICSQSSLKLNCNGF--NTVETVDQSILMVAGAVCLVNGGQPISESNPISFTYSWDNAFN 120
            +C   +L+L C GF  + V+     +L  +   C+VN G P+S    +SF YS  + F 
Sbjct: 61  PMCPIINLRLKCQGFPQSLVDPTFLRVLSSSAGNCVVNDGLPLSPMQTLSFNYSNTHQFA 120

Query: 121 FKPFFSQITC 122
            +P      C
Sbjct: 121 LRPLSWSFQC 126

[Close]

BLAST of Sed0012505 vs. ExPASy TrEMBL
Match: A0A0A0LEA1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G875970 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.2e-46
Identity = 94/122 (77.05%), Postives = 105/122 (86.07%), Query Frame = 0


Query: 1   MATSIKFLCVLFFLSLLSKGNCECTLNDISISQTTTGSVVKGKQQWKATIKNNCICSQSS 60
           M  SIKF+CVLFF  LLSKGNCEC LNDI+ISQTTTGS+V+GKQ WKATI NNCIC QSS
Sbjct: 1   MVASIKFVCVLFFFCLLSKGNCECVLNDIAISQTTTGSIVQGKQVWKATITNNCICGQSS 60

Query: 61  LKLNCNGFNTVETVDQSILMVAGAVCLVNGGQPISESNPISFTYSWDNAFNFKPFFSQIT 120
           LKL+CNGFNTV+ VD SIL V+G+VCLVNGGQPI +S PISFTY+ DNAF FKP  SQI+
Sbjct: 61  LKLDCNGFNTVQAVDPSILAVSGSVCLVNGGQPIFQSTPISFTYASDNAFPFKPLSSQIS 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

[Close]

BLAST of Sed0012505 vs. ExPASy TrEMBL
Match: A0A0A0LDN0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G875990 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.5e-43
Identity = 84/122 (68.85%), Postives = 100/122 (81.97%), Query Frame = 0


Query: 1   MATSIKFLCVLFFLSLLSKGNCECTLNDISISQTTTGSVVKGKQQWKATIKNNCICSQSS 60
           M  SI +  +LFF  LLSKGNCEC++NDI ISQ+TTG  V GKQ+W+ATI+N C+CSQ S
Sbjct: 1   MVASINYFYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYS 60

Query: 61  LKLNCNGFNTVETVDQSILMVAGAVCLVNGGQPISESNPISFTYSWDNAFNFKPFFSQIT 120
           +K +CNGFNTVE VD+SILMVAG+VCLVN GQPI  S+PISFTY+WDNAF F P FSQ+ 
Sbjct: 61  VKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPISFTYAWDNAFPFSPLFSQVA 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

[Close]

BLAST of Sed0012505 vs. ExPASy TrEMBL
Match: A0A7N2M2J3 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.3e-34
Identity = 71/122 (58.20%), Postives = 91/122 (74.59%), Query Frame = 0


Query: 1   MATSIKFLCVLFFLSLLSKGNCECTLNDISISQTTTGSVVKGKQQWKATIKNNCICSQSS 60
           MAT IKFLCVLF LS + KGNC+CTL+ ++I Q+ TG VV+ K  W  TI N C+CSQS 
Sbjct: 1   MATFIKFLCVLFVLSFVGKGNCQCTLSQVTIKQSKTGEVVQQKPVWSVTINNGCLCSQSD 60

Query: 61  LKLNCNGFNTVETVDQSILMVAGAVCLVNGGQPISESNPISFTYSWDNAFNFKPFFSQIT 120
           LKL+CNGF TV+ VD S+L  +G  CLVN G P++ S+ +SFTY+WD +F+F+P  SQI 
Sbjct: 61  LKLSCNGFQTVKPVDPSVLSKSGNECLVNNGVPVAPSSSLSFTYAWDTSFSFQPLSSQIN 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

[Close]

BLAST of Sed0012505 vs. ExPASy TrEMBL
Match: A0A2P5Y751 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A13G066500v1 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.3e-34
Identity = 68/122 (55.74%), Postives = 92/122 (75.41%), Query Frame = 0


Query: 1   MATSIKFLCVLFFLSLLSKGNCECTLNDISISQTTTGSVVKGKQQWKATIKNNCICSQSS 60
           MAT++ F  V+ FL+L+ +G C+CTL D+ I QT TG  V+ K +WKAT+KN+CIC+QS 
Sbjct: 1   MATTLTFFFVVLFLALIGQGYCQCTLADVKIIQTQTGKTVENKPEWKATVKNDCICTQSD 60

Query: 61  LKLNCNGFNTVETVDQSILMVAGAVCLVNGGQPISESNPISFTYSWDNAFNFKPFFSQIT 120
           LKL+C+GF TVE VD S++   GA CL+NGGQP++ S+ +SF Y+WD +F FKP  SQI 
Sbjct: 61  LKLSCDGFQTVEAVDSSLMAKTGAECLINGGQPVASSSNLSFNYAWDTSFPFKPLSSQIN 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

[Close]

BLAST of Sed0012505 vs. ExPASy TrEMBL
Match: A0A5D2MHY1 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A13G071300v1 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.3e-34
Identity = 68/122 (55.74%), Postives = 92/122 (75.41%), Query Frame = 0


Query: 1   MATSIKFLCVLFFLSLLSKGNCECTLNDISISQTTTGSVVKGKQQWKATIKNNCICSQSS 60
           MAT++ F  V+ FL+L+ +G C+CTL D+ I QT TG  V+ K +WKAT+KN+CIC+QS 
Sbjct: 1   MATTLTFFFVVLFLALIGQGYCQCTLADVKIIQTQTGKTVENKPEWKATVKNDCICTQSD 60

Query: 61  LKLNCNGFNTVETVDQSILMVAGAVCLVNGGQPISESNPISFTYSWDNAFNFKPFFSQIT 120
           LKL+C+GF TVE VD S++   GA CL+NGGQP++ S+ +SF Y+WD +F FKP  SQI 
Sbjct: 61  LKLSCDGFQTVEAVDSSLMAKTGAECLINGGQPVASSSNLSFNYAWDTSFPFKPLSSQIN 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

[Close]

BLAST of Sed0012505 vs. TAIR 10
Match: AT4G32110.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein )

HSP 1 Score: 90.5 bits (223), Expect = 1.0e-18
Identity = 43/121 (35.54%), Postives = 72/121 (59.50%), Query Frame = 0


Query: 2   ATSIKFLCVLFFLSLLSKGNCECTLNDISISQTTTGSVVKGKQQWKATIKNNC-ICSQSS 61
           + + K LC++ FL+ +++G  +C+LN +S+ Q+ TG +V+ K +W+  + N C  C   +
Sbjct: 3   SNACKLLCLVLFLAFVNQGYGDCSLNSLSVKQSKTGKLVQNKPEWEVRVTNPCNNCKFQN 62

Query: 62  LKLNCNGFNTVETVDQSILMVAGAVCLVNGGQPISESNPISFTYSWDNAFNFKPFFSQIT 121
            +L C GFN+V  +D S+L+ +G  CLVN G+ I     I F Y WD +F+ K     + 
Sbjct: 63  TELLCVGFNSVTPIDTSLLLKSGDACLVNAGKFIVPHVDIVFKYVWDTSFDLKVIDGVMV 122

[Close]

BLAST of Sed0012505 vs. TAIR 10
Match: AT4G32105.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein )

HSP 1 Score: 83.2 bits (204), Expect = 1.6e-16
Identity = 42/121 (34.71%), Postives = 67/121 (55.37%), Query Frame = 0


Query: 2   ATSIKFLCVLFFLSLLSKGNCECTLNDISISQTTTGSVVKGKQQWKATIKNNC-ICSQSS 61
           + + K LC++ FL+ +++G  +C LN +S+ Q+ TG +V+ K +W+  + N C  C    
Sbjct: 3   SNACKVLCLVLFLAFVNQGYGDCHLNYLSVKQSKTGKLVQNKPEWEVRVTNPCNNCKFQY 62

Query: 62  LKLNCNGFNTVETVDQSILMVAGAVCLVNGGQPISESNPISFTYSWDNAFNFKPFFSQIT 121
            KL+C GF +V  V  S+L  +G +CL+N G  I       F Y WD +F+ K     I 
Sbjct: 63  TKLSCVGFQSVTPVATSLLSKSGDICLLNAGNFIFPHVDFVFNYVWDTSFDLKVIDGVIV 122

[Close]

BLAST of Sed0012505 vs. TAIR 10
Match: AT4G32090.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein )

HSP 1 Score: 72.0 bits (175), Expect = 3.7e-13
Identity = 39/119 (32.77%), Postives = 59/119 (49.58%), Query Frame = 0


Query: 1   MATSIKFLCVLFFLSLLSKGNCECTLNDISISQTTTGSVVKGKQQWKATIKNNCICSQSS 60
           MA ++K   V+  LS++S G C CT   I I    TG  + G+ +WK T+ N C C Q  
Sbjct: 1   MAFALKCFVVVLLLSMVSHGLCLCTFGKIQIGAVRTGREIGGQPEWKVTVINTCNCFQKH 60

Query: 61  LKLNCNGFNTVETVDQSILMVAGAVCLVNGGQPISESNPISFTYSWDNAFNFKPFFSQI 120
           + L+C GF   + V   +L   G  CL+  G  +       FTY+    + F+P  S++
Sbjct: 61  VTLSCGGFAPAKPVKPLLLQPQGNTCLMIKGAALPAGATAQFTYA-GQPYIFRPVGSKV 118

[Close]

BLAST of Sed0012505 vs. TAIR 10
Match: AT4G32100.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein )

HSP 1 Score: 71.6 bits (174), Expect = 4.8e-13
Identity = 40/125 (32.00%), Postives = 69/125 (55.20%), Query Frame = 0


Query: 1   MAT-SIKFLCVLFFLSLLSK--GNCECTLNDISISQTTTGSVVKGKQQWKATIKNNCICS 60
           MAT + KFLC++   + +++  G+   +L  +S+ Q+ TG++V+ K +W+  + N+  C 
Sbjct: 1   MATNACKFLCLVLLFAFVTQGYGDDSYSLESLSVIQSKTGNMVENKPEWEVKVLNSSPCY 60

Query: 61  QSSLKLNCNGFNTVETVDQSILMVAGAVCLVNGGQPISESNPISFTYSWDNAFNFKPFFS 120
            +   L+C  F +V  +D  +L  +G  CL+  G  I +   ISF Y WD +F+ K    
Sbjct: 61  FTHTTLSCVRFKSVTPIDSKVLSKSGDTCLLGNGDSIHD---ISFKYVWDTSFDLKVVDG 120

Query: 121 QITCS 123
            I CS
Sbjct: 121 YIACS 122

[Close]

BLAST of Sed0012505 vs. TAIR 10
Match: AT1G05835.1 (PHD finger protein )

HSP 1 Score: 44.7 bits (104), Expect = 6.3e-05
Identity = 36/130 (27.69%), Postives = 61/130 (46.92%), Query Frame = 0


Query: 1   MATSIKFL----CVLFFLSLLSKGNCECTLNDISISQTTTGSVVKGKQ--QWKATIKNNC 60
           M+  +KFL      L  L + S   CE   ++ ++ QT     VK ++  +++  + N C
Sbjct: 1   MSKPLKFLLWSSLALLLLQIGSGAICEGKSSEPAVRQTQ----VKWREGKKFRVEVMNKC 60

Query: 61  -ICSQSSLKLNCNGF--NTVETVDQSILMVAGAVCLVNGGQPISESNPISFTYSWDNAFN 120
            +C   +L+L C GF  + V+     +L  +   C+VN G P+S    +SF YS  + F 
Sbjct: 61  PMCPIINLRLKCQGFPQSLVDPTFLRVLSSSAGNCVVNDGLPLSPMQTLSFNYSNTHQFA 120

Query: 121 FKPFFSQITC 122
            +P      C
Sbjct: 121 LRPLSWSFQC 126

The following BLAST results are available for this feature:

BLAST of Sed0012505 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896903.1	2.2e-44	70.49	TPD1 protein homolog 1-like [Benincasa hispida]	[more]
KGN60075.1	7.2e-43	68.85	hypothetical protein Csa_001952 [Cucumis sativus]	[more]
XP_030926576.1	2.7e-34	58.20	TPD1 protein homolog 1-like [Quercus lobata]	[more]
XP_016675584.1	4.7e-34	55.74	uncharacterized protein At1g05835-like [Gossypium hirsutum] >KAB2047720.1 hypoth...	[more]
MBA0698815.1	1.8e-33	54.92	hypothetical protein [Gossypium aridum] >MBA0815788.1 hypothetical protein [Goss...	[more]

BLAST of Sed0012505 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A8MS78	8.9e-04	27.69	Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 P...	[more]

BLAST of Sed0012505 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEA1	1.2e-46	77.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G875970 PE=4 SV=1	[more]
A0A0A0LDN0	3.5e-43	68.85	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G875990 PE=4 SV=1	[more]
A0A7N2M2J3	1.3e-34	58.20	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]
A0A2P5Y751	2.3e-34	55.74	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A13G066500v1 PE...	[more]
A0A5D2MHY1	2.3e-34	55.74	Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A13G071300v1 P...	[more]

BLAST of Sed0012505 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32110.1	1.0e-18	35.54	Beta-1,3-N-Acetylglucosaminyltransferase family protein	[more]
AT4G32105.1	1.6e-16	34.71	Beta-1,3-N-Acetylglucosaminyltransferase family protein	[more]
AT4G32090.1	3.7e-13	32.77	Beta-1,3-N-Acetylglucosaminyltransferase family protein	[more]
AT4G32100.1	4.8e-13	32.00	Beta-1,3-N-Acetylglucosaminyltransferase family protein	[more]
AT1G05835.1	6.3e-05	27.69	PHD finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33184:SF44	BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN	coord: 1..122
IPR040361	Tapetum determinant 1	PANTHER	PTHR33184	PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED	coord: 1..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012505.1	Sed0012505.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001709	cell fate determination