
Sed0012505 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTACTTCCATCAAGTTTCTTTGTGTACTCTTCTTCTTATCTCTCCTTTCCAAAGGTATGCATAGGGTTAAAATAGTTTGATTGTAAATTCTCAAGTCTTATAATTATTAGGTTTAAACTTTAATATTCCATTTAAAAAAAAACTTTATTTTGTAATTTCCTAAACTTTGCATGAAAAATACTTGTATTTCAGAACTTTTATGCATAAATGTCTACTAAATAAATAAACATAGTAAACGATTTGTTAAGATTGTTAGCTTCAGGTCACAGTGTCACAAAACCTGCAAAATTTAAATCTTTTATCATTTCTATTATTATTTTGAATTGGAAATTGTTCTTTTAATTTCTTCCGTATGTTTCTTACCTACTTTTTATCTTTAATCAAATATATTTTTCTAAAAACATATATAATTTATTAAGAAAAGAACAATCACAACAAAGATATGATAAACTAAACCAATTTTTTCATCAAATTTTAGACGAAGCTTCAATGATAGTAAAAGACGAAGTATAAATTCAACAATTAAAACCGCACTTAAAACTTACATGTCAAACGTGTAACTCATAATTTTTGTTTTGTTTGGAGTACATATTGGGGGGACAAATACCTATTCTCAGAATCAAACCTGTGACGCTGGTGTTGAACATGTTTACAACCAACCAATGAAACTATTGCGACACTGACCCAATCGTTCATAATTTTGTTCTTTAGTTATATGATTAAAATATCATTTTGTGCCTATACTTTAGATTTTGTTCCATTTAATTCTGCTAAAAAAGAAGAAGAAGATTTTGTTCCATTTAAGTTTAATTACTTTAGGGTTTGCTCGACGACTCAAACGAGACTTACCGCCGCGCTTATGTTACGATTCGATCGATTTCAAGCATAATCCATTTTGTTGTTTAATTTGATTATGGTTTTGAATCATTTTCAGGAAATTGTGAATGCACATTGAATGACATTTCAATCAGCCAAACTACAACTGGGTCTGTAGTGAAGGGCAAGCAACAATGGAAAGCAACAATAAAAAACAATTGCATTTGTTCACAATCAAGTTTGAAGCTGAATTGCAATGGATTCAATACAGTTGAGACAGTTGATCAGAGCATTTTAATGGTTGCTGGTGCTGTTTGTTTGGTCAACGGTGGTCAACCCATCTCTGAATCAAACCCCATCTCCTTCACTTATTCTTGGGACAATGCCTTTAATTTCAAGCCTTTCTTCTCACAAATTACTTGTTCTTAA ATGGCTACTTCCATCAAGTTTCTTTGTGTACTCTTCTTCTTATCTCTCCTTTCCAAAGGAAATTGTGAATGCACATTGAATGACATTTCAATCAGCCAAACTACAACTGGGTCTGTAGTGAAGGGCAAGCAACAATGGAAAGCAACAATAAAAAACAATTGCATTTGTTCACAATCAAGTTTGAAGCTGAATTGCAATGGATTCAATACAGTTGAGACAGTTGATCAGAGCATTTTAATGGTTGCTGGTGCTGTTTGTTTGGTCAACGGTGGTCAACCCATCTCTGAATCAAACCCCATCTCCTTCACTTATTCTTGGGACAATGCCTTTAATTTCAAGCCTTTCTTCTCACAAATTACTTGTTCTTAA ATGGCTACTTCCATCAAGTTTCTTTGTGTACTCTTCTTCTTATCTCTCCTTTCCAAAGGAAATTGTGAATGCACATTGAATGACATTTCAATCAGCCAAACTACAACTGGGTCTGTAGTGAAGGGCAAGCAACAATGGAAAGCAACAATAAAAAACAATTGCATTTGTTCACAATCAAGTTTGAAGCTGAATTGCAATGGATTCAATACAGTTGAGACAGTTGATCAGAGCATTTTAATGGTTGCTGGTGCTGTTTGTTTGGTCAACGGTGGTCAACCCATCTCTGAATCAAACCCCATCTCCTTCACTTATTCTTGGGACAATGCCTTTAATTTCAAGCCTTTCTTCTCACAAATTACTTGTTCTTAA MATSIKFLCVLFFLSLLSKGNCECTLNDISISQTTTGSVVKGKQQWKATIKNNCICSQSSLKLNCNGFNTVETVDQSILMVAGAVCLVNGGQPISESNPISFTYSWDNAFNFKPFFSQITCS Homology
BLAST of Sed0012505 vs. NCBI nr
Match: XP_038896903.1 (TPD1 protein homolog 1-like [Benincasa hispida]) HSP 1 Score: 189.1 bits (479), Expect = 2.2e-44 Identity = 86/122 (70.49%), Postives = 104/122 (85.25%), Query Frame = 0
BLAST of Sed0012505 vs. NCBI nr
Match: KGN60075.1 (hypothetical protein Csa_001952 [Cucumis sativus]) HSP 1 Score: 184.1 bits (466), Expect = 7.2e-43 Identity = 84/122 (68.85%), Postives = 100/122 (81.97%), Query Frame = 0
BLAST of Sed0012505 vs. NCBI nr
Match: XP_030926576.1 (TPD1 protein homolog 1-like [Quercus lobata]) HSP 1 Score: 155.6 bits (392), Expect = 2.7e-34 Identity = 71/122 (58.20%), Postives = 91/122 (74.59%), Query Frame = 0
BLAST of Sed0012505 vs. NCBI nr
Match: XP_016675584.1 (uncharacterized protein At1g05835-like [Gossypium hirsutum] >KAB2047720.1 hypothetical protein ES319_A13G066500v1 [Gossypium barbadense] >TYG85600.1 hypothetical protein ES288_A13G068300v1 [Gossypium darwinii] >TYH90762.1 hypothetical protein ES332_A13G071300v1 [Gossypium tomentosum] >TYJ00145.1 hypothetical protein E1A91_A13G067800v1 [Gossypium mustelinum] >KAG4165160.1 hypothetical protein ERO13_A13G061900v2 [Gossypium hirsutum]) HSP 1 Score: 154.8 bits (390), Expect = 4.7e-34 Identity = 68/122 (55.74%), Postives = 92/122 (75.41%), Query Frame = 0
BLAST of Sed0012505 vs. NCBI nr
Match: MBA0698815.1 (hypothetical protein [Gossypium aridum] >MBA0815788.1 hypothetical protein [Gossypium harknessii] >TYI45886.1 hypothetical protein E1A91_D13G069600v1 [Gossypium mustelinum]) HSP 1 Score: 152.9 bits (385), Expect = 1.8e-33 Identity = 67/122 (54.92%), Postives = 91/122 (74.59%), Query Frame = 0
BLAST of Sed0012505 vs. ExPASy Swiss-Prot
Match: A8MS78 (Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 PE=2 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 8.9e-04 Identity = 36/130 (27.69%), Postives = 61/130 (46.92%), Query Frame = 0
BLAST of Sed0012505 vs. ExPASy TrEMBL
Match: A0A0A0LEA1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G875970 PE=4 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 1.2e-46 Identity = 94/122 (77.05%), Postives = 105/122 (86.07%), Query Frame = 0
BLAST of Sed0012505 vs. ExPASy TrEMBL
Match: A0A0A0LDN0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G875990 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 3.5e-43 Identity = 84/122 (68.85%), Postives = 100/122 (81.97%), Query Frame = 0
BLAST of Sed0012505 vs. ExPASy TrEMBL
Match: A0A7N2M2J3 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 1.3e-34 Identity = 71/122 (58.20%), Postives = 91/122 (74.59%), Query Frame = 0
BLAST of Sed0012505 vs. ExPASy TrEMBL
Match: A0A2P5Y751 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A13G066500v1 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 2.3e-34 Identity = 68/122 (55.74%), Postives = 92/122 (75.41%), Query Frame = 0
BLAST of Sed0012505 vs. ExPASy TrEMBL
Match: A0A5D2MHY1 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A13G071300v1 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 2.3e-34 Identity = 68/122 (55.74%), Postives = 92/122 (75.41%), Query Frame = 0
BLAST of Sed0012505 vs. TAIR 10
Match: AT4G32110.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein ) HSP 1 Score: 90.5 bits (223), Expect = 1.0e-18 Identity = 43/121 (35.54%), Postives = 72/121 (59.50%), Query Frame = 0
BLAST of Sed0012505 vs. TAIR 10
Match: AT4G32105.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein ) HSP 1 Score: 83.2 bits (204), Expect = 1.6e-16 Identity = 42/121 (34.71%), Postives = 67/121 (55.37%), Query Frame = 0
BLAST of Sed0012505 vs. TAIR 10
Match: AT4G32090.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein ) HSP 1 Score: 72.0 bits (175), Expect = 3.7e-13 Identity = 39/119 (32.77%), Postives = 59/119 (49.58%), Query Frame = 0
BLAST of Sed0012505 vs. TAIR 10
Match: AT4G32100.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein ) HSP 1 Score: 71.6 bits (174), Expect = 4.8e-13 Identity = 40/125 (32.00%), Postives = 69/125 (55.20%), Query Frame = 0
BLAST of Sed0012505 vs. TAIR 10
Match: AT1G05835.1 (PHD finger protein ) HSP 1 Score: 44.7 bits (104), Expect = 6.3e-05 Identity = 36/130 (27.69%), Postives = 61/130 (46.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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