Sed0012361 (gene) Chayote v1

Overview


Name	Sed0012361
Type	gene
Organism	Sechium edule (Chayote v1)
Description	heterogeneous nuclear ribonucleoprotein Q
Location	LG05: 20120652 .. 20137617 (-)
RNA-Seq Expression	Sed0012361
Synteny	Sed0012361

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTGGTAATCTTTTGCTCCTTATTTCTTCCTCGATGTCTTTCTTCAATCGTATCTTTTTGCCCACTCTCTCTTGCGCGACTGTGTTATTTTTTGGTCATTTTTCTTTGCGATTCTCTCCTGCGGTTTTTGTTGATTGAAGTCGAAACTTGCAGCTTTCTCCTAAAATCTTGCATCTGATAATACCTAGACGGGCGAGATATAATGGGAATACTAATGCAAGTGGTGTAAATTTTGGGGATAAAATTTGAAGGCGAATGGTTCCTTATAAGGGGATTTGATGCTGAAAATCAGTTATTTTACGAACTCGTACTCTTTCGAAGGTGAAAGAAAATTGTTTACGGAATTATTGGGGCACGGGCTCGTACAAGCATCCATCGCTTTGCAAATTGAATCTTATAAGGAGAGATATACTGGAATTTTTGCGCGACTTAATTTGACGTTTGTAGGTTTCAACTCTTTTTCGTATTTTGGGTATTTGTAGGTCTTCATACCATGACATTTTTTATTTTGACTAATTGATTTTTTGGTCTAAATAGTAATGGGTGGTAATTATGGATTCTGTGTACTTCAAACCATGAATAAAGATGTCGTGCAAATTACTTGGCCATGGGTGTACTTTTTTATTTTTTTATTAAAGGGTGACAACACCGTGAGATATTAATCTTGTTTATTACCGGGAATCATCTGGGAGGGGGAATTGCCATTGTGAGTACATGCCTCAACTTGTTAACACGTAATAACTTTAGGATTGTTTCATTTGAGATTACTCTTGAATTTGTTATTGATGCGTCCTTCTATTTGACTAATTCAGCGCACTCAGTTTAAGTAAGATTATTAGTTTTTAATCAATTTGTATGTTGATTGTTGGATAAAGTTGATTCAGGAGTATTTGTATACGGTGTTATGTGCTGATTGTTATGATGGTCCGGACGACAATTTTCCCATCTGAGTGTGATTATTTTTATCTCTTCTTTGCAGGGTGTACGCAGATTGGTATGTTGTTTGGAACTGGTTTATGTTTTATTGAGATGGGCAAAATTGATTCTCCATTTGTTGGAGCAGTCTCGTTCCTTTTTTGCCTAAACCTATATCAAAATGGTCCCATTAGATCTCATATGCTACTTTGTGTGGCATTGTTATGTCCTTGCATTAAAGTTAAACATTCAATTGTCTCCTTAATTTATTCTGCCGTCATTAACATTAGTTTCACGAGATATTTAGAAAATGATACCCCTTGGAAAAAAGATGTAGAAAGCTAATTTGTCAATATTTTTTTTTTTTTGCTATGGCAATCATTCTGATATCAAGACATTCACACCCTCATGTTGTTTTGCACCACCTCCATATGTCTCGTTGTAGTCACTGAGAGACTTGCTATCTGGTCTCTTTTATGCTACTTGTGATAAACATTATTCTTCTAGACAAAGAATCTTTCACGTTTCAATCCCCTGAGTCTATTCTCATGACAACTTTTCATTTCAGCTTCATGTTTTTCTACTCCATTTGGCCTTTCTTTTTGTTTCCTCTTCTCAATAATTTTTTTATATCTCCCCATGAATTCTTCTGGCCTCTGTGCCGTCTTCTTCACAGTTACTTTACAAGGTTGTTTAATTAGACAAATAAGATGCCAAGGGGAAAGGGAAATGCTTCATCTACTGCCAGGCCAGTTGAACCTGAAAAGCCAGTTGACTCTGATGAGAGGGTGGATCTTGATGTTGATAATGATCCTGAGGAGGAGGTTATGGTAGAAGATGTTGAGTACGAAGAAGTTGAAGAGGAGGAGGTAGAAGAAATAGAAGTGGAAGAGGAGGAGGAAGAAGAGGAGGAGGAAGAGGAGGTTGAGGAAGAAGATGTGGAAGAATTGGAAGATGATGGAAATAATGACACTGGAATTAATGTCGAAAATGAAATTGGTAATGATGAGGATGAAAAGAAAAAAAATACTGAGCTTCTTGCTCTACCTCCTCATGGTTCTGAAGTATATATTGGTGGTATTCCTCAAGATTCTTCTGAAGAGGATTTGAGGAGTTTTTGTGTATCCATTGGAGAAATTACAGAGGTATGCCCAATTATGTTCATTTAATATCCAGATTATGTGCTTTGCATAGGAACTGATGATATTTTGCTACAAGCAGGTTCGAATTATGAGAAGTAAAGAGTCAAATGGGAATAAAGGCTTTGCATTTGTTACCTATAAAAGTGTGGAGTTGGCTTCTAAAGCAATCGATGAACTGAATAACACTGAATTCAAGGTTTATTGATTTATTTTTCTTTCTTTTGTTTGTAGTCCATTCCATACATCAAGAAGTTGAATTTTTTAATACATACAGTTTTGCATTCTTCCATGTCTTTTCTTTCAAATATCCTTTCTCAGTATTTTTAACACCTCTCTCACTCTGCCTGTGAAATAGGGGAAGAAGATAAAATGTTCTTCTTCTCAAGCGAAGCACCGTTTGTTCATCGGTAATGTTCCCAGGAGCTGGGGTGAGGAAGATCTCAGGAAGGTTGTGGAAGACATTGGACCTGGAGTTACTGCTGTGGAACTAGTAAAGGTTAGCATGACAGTACTCTCATGTTTTATTTTAAGTTCTTGGCATGACTTATTCGCTACATCTGGTACTATTCTGTGATCTTGTTCCACAATTATTATACCCTTCTTTTTTCCAAGAATTTATAAGTTTGTAAGGTGCAACATAACCTAGTGCGCTAGTTTCTCGGATTTGATGTACACAAATTTTGGTTGCAGGATATGAAGAATACTAGCAATAACAGGGGCTTTGCTTTTGTTGACTACTATAATCATGCATGTGCCGAGTACTCAAGGCAGAAGATGATGAACCCAAAATTTAAGCTAGATGATAATGCTCCAACTGTTAGTTGGGCAGACCCTAAAAATGCTGATTCATCCGCTACTTCACAGGTCTTGCCCAATTGCTTTTAGATTTCTCACGTTGGTAGTCCATTGACCATTCAATGTGTGTGTTTATTTTTCGATCCATGTTAAGATATCTTTTAATCTCTCTCAAACAAAACCCTAACAAAAACCTAACCTTCTTCCCCTCCGGCGTTGGAGGAGGAACATCTAGTGTTTTCAAAGCGCAAGGAGCAACGCAAGGCGATACTCTCCTTGATCTCCTCAAAGCGAGAGGCGATAAAAAGGCGAGGCCCTAGTGAAGAGAGGCGCAACAAATAAATGCATTACTAAATAATATATTAAGCATAAATTGATAATTAAAACATATTTGTATTCCCATAACATTTCAAATTCATATGGAATAATACTAAAAATTTAAAAGTAAAAGAATAATAAATCATAAAAATTATTTTATTATAAGATATACCATACATATTAAATTTTTATTTGTATAAAAAATTTGAAGTTAACCGAAAGTATAAAAAAGCAAAGACTCTACATCAAATAACTCGAATAAACATACACACATATATATTTGAAGTAGCAATTAAACAAATTCAGTATCCTTAATAAAGACTTCCATGGTTGTTGGACTTCTTCACGAGCTAATTCTAGGTTCTTTTTGTGGATATTAAGTTAGCATATTGATACATAAATAAGACTTTAAAGGCGCACTCCTTGGCCTGAGGCGAAGGCGATGCAAAGCGCAAAATGGCGAGGAAAGGCAAGGGCTTGATTGAAGGAGCTCGCCTTAACTACGTTAGAGGCACAATACCCACCTATGTGCAAGACGATGGCCATAGGCGAGGAGATGCGACGACCTTGAAAACACTAGGATCATCGCAACAAACTCCCTATGTTTATCCTTTTGAAATTGAACTTTAATTTTTTCCTTTTCTTTTTGTGATCAGTCCTCATGGATTGCCCCCTATTCGATTTTTAGGGTATCATTGTTTAGTTCAAGTTTCGTTATGTTGTGATGCTGCTCTTCCTCATCTCCAATAAGGTTGCGTCGAACCAATGTTTGTGTGCAATGAAAACCGCAAGTGCAACTTAACTCCCCTTGGTATTAGTTGGTGCTTCTTGGTTTTGTTCGCGTGTGTTTGTCATGACAGATGTTCCTCAACATCGATGTAGATTGAGTGTTGAACACGAGGTTTGACTTGTGTGCAGTAGATCTGTCCGAGTTTTGTTGCATGTTGCACCTTTTCTTGAGACTTTCTTCTTCTACATCCTCTCATTGGGCTTTAGAAATGTGCAAGGAAGTGCCCTTTCTAAAGCTTTTGATAGGTGATGGATTGTGAATCTTCCGCACTGTTCACCATGTGACATTGGGATGAGCCATGATCCTCTCTTCATTCCTTTTGGCCAAATCAGATGGAGATTCCCCGACTTACGAGATCAACCTTGGATGTATAGTTGATTCATGAGATAATCTTTTGAATGCACAAGCTCTCCCTTCTTAGGATCATAAATTGGATGTTTAACTTCGAGAGAGATGCAAACTTGTCTTTTTTTTTTTCCTTTTTTTTTCTGTATTAAAAACCTTATAACTTGACCCTGTCCTTTGTAACACTTTCATTTAACCAATGGAGTTGTTTTCTTTTCCTATAAAAATAAGATATCTATTAAACTCAGTTTGTTAAATAATTTAGCTTATGAGATTGATGTATACTTTTTAAGTTTTATATAAATATATAATAGTTTCTAACGAACTTCATGTAACTATTTGTAAGCTCCTTGTGGGTAAGAACCATCAAATATATATTGTTCAAGATTTCATAATTTGTGGCATTTTTTTTATCTGAATTAGTGTACATAAATTTGAGTTTAGGGGGTGGTTTAGGGTTGTTTACATGAATTTGTGTACAGGAAAACAGTCAAAAGGTCAAGTAATCATTTATTGAGTATTTCAATCTAACAACTGATTTCTTATGTTCATCAAGGCAGTGTCTCAAATTTTGATGATAAATATAATGAGATGACCAGTGTAAAATTTTTGTGATATGTCATTGCTAGTCCTTTGCACCAGTATTGTTGGTTTTTGTATTTATGGCCTTCAGCCCTTAGTTGATTATTGACTAAAGGCAGGACTCAGAGAGTTTTGTATTATTCGTTTTCAGATTATATCTGTAGGTGTTCTATTTTCAATAATAGTTTGTTCCCATATTTTTTGTGTCAACATAGGTGAAGGCAGTTTATGTAAAGAATTTGCCAAAGAATGTAACACAGGAGCAGTTGAAAAAGCTGTTTGACCATCATGGAAAAATTACGAAAGTGGTGTTGCCTCCTGCAAAGTCTGGACAAGAGAAGAACAGAATTGGTTTTGTACATTTTTCGGAGAGGTCCAGTGCTATGAAGGCTTTAAAAAATACAGAAAAATATGAATTGGATGGTGATCAATTCTCCCGAAGCTCTTCTAAATTTTTTATTCTACCCTTCATCAAGTGGGGCTGGTCTTTGATATCTGTTTTTTCATGCTTATATATCAGGTCAAGCTTTGGAGTGTTCTCTTGCAAAGCCACAGGTAGACCAGAAATCTGGTGGATCGAATAGCCAAAAGTCTGGATTGCTTCCTTACTATCCACCTCGTGTGGGATATGGCTTTGTTGGGGGTGCTTATGGTGGTGCTGTAAATGCAGGATATGGTGCTTCTGGTTTTGGTCAGGTAAAATTTGCATTGTTTATCTCCTCCATGGATTCTAAATTAGGTATGCTGTTTGCTTGATTAGATTAAACTAGCCTTCTCTTTTTGAAATATCATTCATTTAGACATGTGGCTAAGACTTAAGAGTGTAGTTATAATTGGAGCTCAGAAGAATTCAAATGTTTGTTGTGAATGTTACTTGCCAACGCAAGGTTACAACAGCACTATTTTTTTTTTTTAGAAACACAACAGCACTAGTTTTAATCCTTCTAGTTCATTGGGTGGAACAATTTGATGTTGACTTATCGTGAGTCCGTGACTTCCACTCAATTCATTGGCTTTGGAGTGATTATTTTAACTCATCTGTCAAAAACAAAATTGGGAAAGTACCTCGATCTCTATTTGATAGGGTCTACTCTATTTAAAGGTCCCTCCCTCAATTATGAGCCAATTCAATGAATCAATATTCCAAGTTGTATTCATAAGAGAAAGATACAACTTATATAGCCCACATAGAGACTAACTGTGAAGACTCCTAAGGGTTAGAATATTAGTATTATATTAGTAAGTGTATATTGGTAATTAGTTATTAAGTTTTGCTTAAATGGGGGAGTTGGGGGCCTTAGAAGGTCATGGATATTTTGGTATTTTTGTCTTGTTCAACAAGTTGGGAGAGTGTAGCCCTCTCGAAAGGCTACGGTATGGCATTTTAACATATTTCTATCTATTATTGTAATATATTTCTATCGTATTTTTTATTTGTTCTCTTTTATTCTATTGTGCTTGTAAGACAATCGGTGTCTTAACAAATTGGTATAAGAGTAAGTTCTTTTCTGAGAAACCATTCAAGCAATGGAGGAAGATATGGCAGGAGAAAAAGGTTCGAAGAAAAGAAGAAAATAAGGGTACTAGGGGTAGAGATGTTCATTTTCCTCGCGGGACCCGCCCCTAACGGGGCGGAGAATCCTCGATTAGGCGGGGAACGGGGGAGAAAAAATCCCCGGCTAAACGGGGCCAAGGGCGGAGATTGTATTCCCCGATCTCTGCCCCATTTATCTTTCTTTTTTTAAAAAAATATTTTTTCTTAATTCTGCCCCTTTAATTTTCAAATAAATATATATTTGTTGGTAATATTATCTATGCATATGAATAATTTCTTTGATAATTAACATTATAGTTGAAACTTAGATATTTTCTAAAAAAATCTAATTTTTTTGTTCAAGAAATATATAAAAAATGAAAAAGAAAAAAAAACAAATTGAAAAAAAATTCCCGCGGGGAACCCGATACTTGTCAGTGACCTGCGAAACATGGATTTTTTCGGGGATGAGGATTGAATTTTATGGTGGGGACGGGGACGGGGAAACCATTCCCTGGCCCCGCCTCGCCCCGCCCCGCCCCATGGACATCTCTAACTATGGGGTAAGTCGTCCATGGTTCTTAGGGCCAGAAAACAATACTCATTTGTTGGTGGGATCAAGTATTAGTCTCTAGAAAAAGAAAGAAGTTTATGAAAAGAAAAAGAAATGGAAGAATAGTTTGGAAGAAGAAACAAAAACAAGGTGGGTATGGGGGCAGAGAAGAAGAAGAAAAGAAAATGGGTATTGCGACAGAGAAGAAGAAACAAAAAGTGCTGGAAAAAAATGGAAGCTTGCAATTGGTGAAGTGGAAAAGAATTAAAAAAGAAAAAGAAAAAAATGTGAGTGTTGGAGTAAAAGGAAGGAGAAAAAAAAAATGGAGAAAAGAAGTCAATGAGACTTGTTTTGATGTTTGTTTGTGAGGAGAAAAAGTGTGGAAGTGACCTGGCCACCAGAAATGCACATTGTCCTCAAGGTGTTTACAAAGAATAAAAACAAAAAGAATACCAAAATTGAATATTAAAGAATACAAGAAACAAATTTGAAGAATTTTCTTTCTTCTAGTGATCGGAGTTGGCAACAGGTGGTGGTGATCAGAGCCGACAAGGCGATAGTGGTTGATGACCGATGGACGGCAGGTGATGGCTGGTGGTGTGATCACTATGATGTTTATCCAAGAATTTGATAGTTTCATAAGCTACATACGGGGGGCTCTGTTTTGTGGATAGAGAAATGCTCTACAAGAAAAGGTTACTATGCTGAATTTCATAGAATAGCACCCAATGGAGCAACTAACAATATTATCATTCCAACGGGGAGTGATGGAAGGGGATGGACTCTTTTTCACAGGGGTATTAAAGCTTTTAATGAGGTGAAGAAAAGTGAAAACATCTTTAATACCCTCACCAACCAAAGTCTCGGTGGATCTACTTTTAAAGATGCATTAAGTGGTAGAACTGGTAGAAGTGAAAAAGCTGCGGGGGTTAAAAACAGAGCAATAGAAGAAGTTACTTGCGGACAGAGCATCACAAACCTAAATCCTTTAGATTTATCGACTGCGATTATCATTCAAAGAGAATGCTTTCATGACTCATGGATGGATATTCGAAAAGCCTTTAAGGAAGAAACAGACTTCGACGTAGCTATCAGTCCCCACCCCCCGGACAAGGGCCTCCTTATTACGAGAAACAGAGACAAAGCTTATACACTGGTGCAAATAGAGGAGTGGTACAAAGTTGGGAGATTTAATGTAAGATTTTGGGAATACATGCCAAAATCTTCTCTGAAAAACCAGTGATAGCTTGTTACGGTGGCTGGATCAGAATCAGAGATCTTCCTTTGGACTACTGGTCTTTACAGACCTTTAAGGATATTGGCAATGAGTGCGGAGGATACCTTGACAACTCAAAAAACCCTTACTAGGATGGACATGATGGAGGTTAGCATAAAAATTAAGGAGAACCATCGGGGTTTTATCCCAGCTGAAGTTTATATCCCATCTTCCTCATCGTCCTATTGTAAGGTCAGAATCGACCCTTTCTTCGATGGAAAGTCGAGTAATGGCTATGTTTTCAGTGTTCATGGCAAGATTCTGACGGCCCCTCACTGTTCATCAGCTACACGCGCCGTTGCAAAGGAGTGGGTTCTGGTGAAAAGGAAAAATAACGCCAAAATTGTTGATTTTGACAGGTCTGCCCCATTTGACACCTGGTTTATCCCTTCTTCTCCAACTCTGTCGGACTCTTCTCTCTTAGACCCTGTCCCATCCCCAGGAAAATCTCATCCAATCTCCGCCCAAACTAATCAGACAAACCATTTAGTAAACAAACCAAATGCCCCCCTATCACAAAACAGCCTAGTCTATCCATTCAAAATACTTTACCTAACCAAACCCAACAGAACAAAACCTGCCTCGAATCCTCTCCCTTGCCTCTCCCTCTCGGATAGGGCGGCCTGTCATCATCAATGCCAGACACTCTCTTCTGGTTGCGGGTACTCGAAGCTCCACGAACCTCTCCCAAGCTTTTGATGTTTCGGAGGGAGGATGCTCTTCCCCTGGATCACCACAAAGCGAGAAGGCGTTGAGGATTCACCAAAGAGAAGCTTTCTCCGACTTAGAATTTTTTTTTATGAACAGAAAAAGGGTCAATCCCCCTATGAGGAACCAGTCCCCATGAGGATTGACAACTCGACTCATGAACATATTCAATAGTTGAACAAAGCCTGGAATAAGATACTGGATAGCGAGATCCCGGCCGAAACTGCAGCCCTCATCCCTTTCTTCTTCCCTTGGATCCCGCCCGACTACCAAGGGACAGAGCACGATACAAAAGAAGCAGCGAAGTTGGAAAAAGGAACTAGAGGGTCTTAAGTCCTCTGTTAATTATGATTGTTCCTCTGTCTCAAAACAGAGAGATGGGAAAAATTGTTGTTTATGAAGATTATTTCCGGGAATGTGAGGAGTTTGGGATTATGGAGGAAACGAGCTCTCATTAAAGACTTTTTGAAGCAGCATAACTCGGCCATTGCGATCCTTCAAGAGTCTAAACGACCAACTATGGACAGACGTTTCATAAAATCTTTTTGGAGCTCGAGGAACCTTGCTTGGTGTACCTTGGATGCAATCGGATCATCCGATGGTATTGTCATTGTTTGGAATGAGGCAATCCTCAAGGACACACAAGTAATTAAAGGTACCTTCACTTTATCTATACACTTTGTTTTATCTAATAAGTTTGAGTTCTGAATTACAGGGGTGTATGGACCCAATGGCTGCAAAGATAGGGAGATGCTGTGAAAAGAAATTGATGAACTAAACACGAAGTGCAGTCCTAACTGGATTCTAGGAAGGGATTTTAATATCACTCGATGGACTTGGGAGAAATCTTCTGGCTCTGTTCCTACAAGGGGGATGAGAAAGTTTAACTCAATCATTGCCTCTGTGGGATTAACCGACATTGGGTTATCTAATGGCAAGTATACTTGGTCTAATGGCAGAGATCTTCCTGTAATGACACTGATTGACAGGCTTTTGATAAAGGGAGGCATTGAACCCAAATTTGAATCGGTCACTGCAAGAAGGTTGGAGTGAGTCATCTCTGATCATTTTCCTATCTGCTTGACTTTGGGGAAAGAAAGATGGGGGCCAGCACCCTTTAGGTTTATAAATACATGACTAGAGCATCAATCCTTCAAGCCCTTGATTGAAAACTGGTGGAAAGCTAATGAACTCATGGGCTGGCCGGGCCATGGTTTTATTCAAAAGTTAAAGCATCTCAAATCAGTCATAAAAAACTGGAATCACGAGACTTATGGCCATCACAAAGCAAAGTGTTTTTCTCTTAGAGAAGAGATCACAAACATTGATCTGAAAGTAGAGGTTTCGGTACTAGAAAATGATGACTTGGAAAGAAGGGTGGTTGCCAAAGCAGAACTCATTGAAATTACCGCAAGGGAAGAATCCCTCTGGATTCAAAGAAGTAAAGCGCATTGGCTTGCTATGGGAGATGAAAATAGTTCATTTTTTCACAGATGTGTTGCTGCCAATAGAAGAAGCACGATTATTGAGGTCCTGTCTTCAAATGGATCGGCTGCGGTCTGTGATAAAGATATTGAGACAGAATTGTTATCATTCTTTACTAATCTCTACTCAAAGAAGAAGAACAGGGAGCCTCTGCCTAATCTTCCTGATTGGATTCCTATCTCCGTCAACCAAAGCGATGCTCTTGAGGTCTCTTTCACGGGAGCGGAAATATTGCGAGCTGTTAATGACTTGGGAAGCAACAAAACTCCCGGACCCGATGGTTTCACAGCTGAATTTTTTAAAAAATCATTGAACATCCTTAAGAAAGATATTTTGAGAGTGTTCAATGATTTTTTAAAAAAATGGCATCATCAACGCGAGTCTAAATGAGACCTATATCTGCCCGATTCCCAAAAAGAGTAACCCCACTACTGTTCAGATTATCGACCTATTAGTTTAACAACTTTCCTTTACAAAGTTGTGGCTAGAGTCCTATCTGAATGTCTGAAAAGTGTATTGCCTACAACAATTACGAAGTACCAATCTGCCTTTATGGCTGACAAACAGATCCTAGATGCCAACCTCATTGCCAACAAGATTATTGATGAATGGGTGAGGAAAGAGAAGGGGTAGTCATAAAGCTTGATATCGAGAAGGCTTTCGATATGGTTGATTGGGACTTTTTAGATGATGTTATGAGAACAAAAGGCTTTGGTATTGTCTGGCGCCGATGGATTAGAGGTTGTATATTGTCGACTAATTTCTCCATCATTATTAATGGCAAGCCCCGTGGTAAGATCTTTGCTTCTAGAGGTCTAAGACAAGGGGATCCCCTTTCGCTCTTCCTATTCATCCTTGTGATGGACTGCATGAGTCGCCAGATGATCATTGCAGAACAATTGAGTCTCATTGAGGGTTTCAAGCTGGAGTGTGGGAACCGTATCGAAACTGTCACCCATCTACAATTTGCAGATGACACTATCTTGTTTTCATCTTTAAAGACAGATTCCCTTAAGAATATGGTTCTAACGATAAAGGACTTTGAGGATGCTTCTGGCTTAAATATTAATTGCCATAAAACATCTTTCCTTGCTCTTGGAATTGAAGAGTGTGAGGCATGATTGCTGGCCTCCCCCCACAAATTTAGAGTGGAAAAATGGCCATTGACTTACCTTGGTCTTCCCCTAAATGGTAACCCAAGATCTATGCTTTTCTGGACTCCCGTCATTGAAAAAATAGAGAATAGACTTCACACTTGGAGCTCTTCACACATATCAAAAGGAGAGCGTCTCACCCTATTAAACGCTTCTCTTGCGAATATTCTGATTTATTACCTGTCATTGTATCTGGCTCCAAAGAAGGTCACTAACGCAATAGAGGAGCTTATGAGGAACTATTTGTGGAGAGGAAAGGGGGGAAGCAAAATGAACCACTTGCTAAGATGGGACAAGATGACCAATCCCCTTGAGAATGGTGGTCTGGCCATAATGGATATCCATCAAAAGAATATATCTTTATTGTCTAAATGGCATTGGAGGTTTTATGAGGAGAAAGGTGCTCTATGGAGACTGTGTATTGAAGCAAAATTCGGAAGGGGGGATGGTGGTTTCAAATCTGGAATTTATAGTCTTCGTACATCGAAGGGCCCATGGCGTGATATTGATAAGTGGAAACAATTAATTTACGACAATATCTCTGTTTCCATCGGTCGTGGGGATTGTACTCTTTTCTGGAAAGGGCAGTGGTGTGATAGCATTATTTTGGAATCTTCTTTTCCTCTTCTTTATAATCTGTCCCTAACTAAAAATGCATTTGTTGCGGAATGTTGGAATCATGAAGCTAAATCATGGATATTGAATTTAAGAAGGAATCTTAAAGATGCTGAGATTGAGGAATGGGCCATTCTCTCTAATCTCTTGGATAAAAAGACGTTGATCAACAAGAATGATTCTTGGCGATAGGAAGTTTGAAGCCCGGGAGTGTTTTCTACAAAGTCCTTATTGATCTCTTTTGCTTCCAGTGTTCCGCAAGCTGTGAAGGATTTTTATGGCAATTTGTGGAAGGGTCCTCAACCTAAGAAAGCAAAGTTCTTCACATGGGAACTTAGCCATGGAATCATTAACTCTAATGATAGGATGCAACTTAGAGCTCCTGGATTATCCAAATCTCCGCAATGTTGTGTCATGTGTATGAAGAGTGCCGAAACACAGTATCATCTTTTTTGCTCTTGTGAAATCGCAGTTGGGGTTTGAATCAGCTATTGGAGGTTTTTGGATGGCAGATGGTGATGCCCGGGAATATGGGGGAATTGGTCTTTTACGCATACACTGGACATCCCTTTAAAGATGAGAAAAAGAAGCTTTGGGATCTATTTCTGGCTGCTTTTTGGTGGTCTATTTGGAAGAAAAGAAATTCTAAAATTTTCTCTACAGAAGACCAAGGCTTAGGAAACTTGTTTGAATCCATTTCTGTTCTTGCTATATCATGGGCTCATATTTTTTACCCATTCAAGGATTATAGCATTACTACCTTATTATCTCATTGGCAATGTTTTTTGTAATTTTTCTTTTTCATCTGTAACTTTTCCTTTATCAACGAAAGTTTCTGTTTCCTATAAAAAAAAATGTGGCCAATCAATGATTTTATTAGGCCAATTCTTGTGATACCATAAAGGGTGTGTTTGGAGCACCGGTTTGGTTATAATAGACGGAAGGTTATGATAAATGGTGGGTTATTATAAATGGTGTTTGAGGGACAAGTTATTATAACAGGGATTATGATAAACGGTGTTTGAGGAGCTGGTTATGTATCAAAAACTAATATATGTAAGGTTTAGATAAACGGGCACGTAGATTTAGGTAACCACCGTTTATAATAAACGGTGGGGTAAACGTCGGTTGGGTTATTATAACCAACCCGGCCGTTTACATAGTCGGAGGCCCAAACACACTCAAAGTGATTACTAACACAGCCCTTTCTTTAAATCAGGCCCATTAAAATTCCTTCTATCCAGTCCTTATTTTTTGAATTCAACAAACACAACAATTGGGGTGGAGGTATTTGAATTTGTAACCTCACGGCTACTTAGTCATTCTATCCGGTCCTTGTTGAAAATGCTCCTGGAACAAAATCCTTGTAGAATTCTCTCCATAATGACAACCCATGTAATTAGGGTTTTCATTTTACTCACTTGAAAAAACTTACAAATTTCCTACTGCACGTGTTTAGGGCTTGATGGATCAACTCTTACACAAATTGTGTTGCATGTGGGACCTCCATGGACGATTTCTTCGAGCCAATTTCCAGCAATTTCATGTTTTTTCTTCATATGAAATCTCGGACGACCATGAGGGGCTCGTCTTCTTTTCTCTTATTGAGTTCATCGGTGGCCAAGAATCACCCTCTTCTTTTCTTCCTCTCTGCCTCTTTCTTTTTTTCTTTGCAACTTGCAAGAATTCTTTGACGGCCATGAATCGGCAGTTGTTGATATATCATATATGTTGGTCGGAGTCATGGACTCGTGTTGGATGTTGAAGCTCGACAGAACAAGGGGTAGGGAGAAAGAAAATTCACAGTACCATTCTTGAAATATGAAACTGAGCATGCTTCTCTATTCCACCAAAAATGATATTGAATACCAACCGTTACCACCCATGTGACTACAACTGGCCTAATTCTTGTACCATTGAAGTTTACATACTGGAAGTACCAAGGGACCAATAACTGAAACAATGCTGAATTTGTAGAATGTCTCTCCAGAACCTCACATACTGAGATAACTAAATATGACAGTAAGCAGTAAATATGCAATGGACATGAATACATAAAATCTCATTAAAGAGAGCATCCATCCGGTTAAATAACCATAAGCTTTACTGTATGATTGAATGTATCCTCCATATTTGGCTCTACCCCAACATGGAGTGGTTCAATTGGTCAAAAAGGGCTTTGGGGTGGTGCATAAGGTGATGAGTTTAATCCATGATGGCCACCTACCTAAGAATTAATTTCCTACGGGTTTCCTTGACATCTAAATGTTGTAGGGTTAGACAGTATGTCTCGTGACATTAGTCGAGGTGCGCGAAAGCTGGTCCAAACAGTCCTGGATATCAAAATAAAATATTTGGTTCTGCCCCACCTTGAGGTTGTTTTGTTGACACTTTTCTTCTATGCTGTTTATGATTTTCTTCATGGTTCAAGAACTCTTTTCTTGACCATAAATTCTATCGATGATTTCTACTTCCTTTTTGAATGAAAACGCTTTTTCTTTATATCTTTCTTTTTATGTTTTCAGATTTCTAAATGATCTTTTCTTTTAAGAGCTTTCCTTGAACGCATACACGCATACACGCATACCCTCCTTTCCTGTAGAAGAATGATCTCTTTATCGTAATTGTTCATGTCTTTCTTGATCTCCTTCATATCCTCCTTTATTTTCTCTCCCAAGTTTGTCCTTTCTCTTGTAGAGGTTGAAATGCAGAATCTCATGTCGAGTCTATTACAAAATCTATATTCAAACTAGCTATTACAAAAACCTCAATTTTCTAACTCCTCAAAATAACTCATCCAAACACCTGGGTTATAACATATGGTATTTGTGCATGTTTATCTTTTATTGTGTTTCAATACGATTATTGTGCTGTGCATTTGCTTCTGTGCCTTGGGCAAATGCAGTTCATATTTTTTATAAGAAAAAAGTCTGATCGAATTGCACTTAAGCTGCAGCCGTTGATATATGGCAGAGGACCAACTCCAGCTGGCATGGCCATGATGCCAATGTTGCTGCCTGATGGACGGATTGGCTATGTCTTGTAAGCTCATACATCTTTTATTTTACCTATACTGTACCTGAATAATAATCTGATGATTCTGGTCGTAATGAACAATTTTTTATTTGTTTCTTCTTAAACTCTCTTGTATAGGCTTGAAATGGAATGATATAAATCCAGATACGCTTGGAATAGATTCTATTTGAGAGAGTTGAACAAAAAAGTACAGTCCTGTTGAAGGTTCCTTATGAAGCCATATCTTAAAATATTAACCTTTATTTAAAATCTCCCGTCCACTTCATATCTCTGGCGAGGCTACTATTAGGTTGATCTGAATAAAAAAAATCTCTGGCGAGGCTAGTATTAGGTTGTTCTGGAACAGCATGAGAAGTCTGGGCTCTGTTGAGTGTTGTCTTGCTTTATGACTTTTACCATTTAACATTCAGTTTTACCATTTATCATGTATGACTTTTTTAGGAAACCTTAACTTTTCATTGATGTATGAAAGAGTAAAAGAAGCCCTATCGAAACTATTACAATATATGATGCCAATGAGTAAAGAAGAAAGTAAGATCATAGTTACGTGGGAGCTTATGACTCCAATATAACTTGGTAGGAAAGGTGGATTCAATGAGAGAGTCAAGAGAAAGATGATTGTCTTTAAAGATCTGGGTCTTTCTTTCCAACCATCATTTCCGGAAAGAAGGCATTGACATAAACCAATTTAGCCATGGTCTTCAAAGATCCTGCTGTTCCTTTGTGTACAAAAAGCTCTAACTAGTGGTATGTTGTTCACTACTTGCTGAAATTATGTTTGGAAACTAGTTAGACGTATAAATGAAGCTATTTATTGTGGACTCTCTGTTTTGGTCTTAGTACTCGGCTAAATACTCCTGGACAAAGTAATTATTGGGTCTTTCTTTTTGTAATTTCATACCTGTTTCTTATAAAAATGTAGCTTTCAGATCCAATGAACTTAGCCTTGTTGGATTAGTGTCTTCCACATTCCAATAGAGGAGTTGTATAATATAATCCTAGAGTATATTGTTTGTACATATTTTAGCTTATGCCATGCTCCCATATCTCATTGCAGGCAACAACCAGCGTCACAAATGCTAACCCCTCCACCACATCCAAGAAGTGGCGGTGGCAGTGGCAGCAGCGGGAGTGGCGGCAAGAATGGCAGCGGCAGTTCTAGTAGGGGGAGACATTCACACGACAGTGGCGGCCATGGTCGCAGATATCGACCATATTAATTCATACTGTTGAATGGAACAAACAGAAAGGTTTTTGACGGAAGTGCCTCCCCCTCCCTCCGCCCCCTAACATTGTGATAATATTCTTCGGTGTTGATAAAGTGAAGCTAATTTGTGGGTTTTGTAATGTGTTTGCTAGTCTCCATCAATATTATTAACCTAGGTTACATTGCTTTCGGTTTTGTTCATTTTCCTCTCCACTTTTGGGCCAGAAATACGTTTTAGTTATCATTTGTGGTAAACAAAACATGGTGATCTCGAATTTGAGAATGTGTGCCTCACTGAAAGTGATGAATTGACTAAGCATAGCTGCTCCTATTTTGATGTACTATTTTAACACTAAGAATATGCATGTCGATCTTGTGGGATGGACTTGATTTTACCAATAACTG

mRNA sequence

CTCTGGTAATCTTTTGCTCCTTATTTCTTCCTCGATGTCTTTCTTCAATCGTATCTTTTTGCCCACTCTCTCTTGCGCGACTGTGTTATTTTTTGGTCATTTTTCTTTGCGATTCTCTCCTGCGGTTTTTGTTGATTGAAGTCGAAACTTGCAGCTTTCTCCTAAAATCTTGCATCTGATAATACCTAGACGGGCGAGATATAATGGGAATACTAATGCAAGTGGTGTAAATTTTGGGGATAAAATTTGAAGGCGAATGGTTCCTTATAAGGGGATTTGATGCTGAAAATCAGTTATTTTACGAACTCGTACTCTTTCGAAGGTGAAAGAAAATTGTTTACGGAATTATTGGGGCACGGGCTCGTACAAGCATCCATCGCTTTGCAAATTGAATCTTATAAGGAGAGATATACTGGAATTTTTGCGCGACTTAATTTGACGTTTGGTGTACGCAGATTGTTACTTTACAAGGTTGTTTAATTAGACAAATAAGATGCCAAGGGGAAAGGGAAATGCTTCATCTACTGCCAGGCCAGTTGAACCTGAAAAGCCAGTTGACTCTGATGAGAGGGTGGATCTTGATGTTGATAATGATCCTGAGGAGGAGGTTATGGTAGAAGATGTTGAGTACGAAGAAGTTGAAGAGGAGGAGGTAGAAGAAATAGAAGTGGAAGAGGAGGAGGAAGAAGAGGAGGAGGAAGAGGAGGTTGAGGAAGAAGATGTGGAAGAATTGGAAGATGATGGAAATAATGACACTGGAATTAATGTCGAAAATGAAATTGGTAATGATGAGGATGAAAAGAAAAAAAATACTGAGCTTCTTGCTCTACCTCCTCATGGTTCTGAAGTATATATTGGTGGTATTCCTCAAGATTCTTCTGAAGAGGATTTGAGGAGTTTTTGTGTATCCATTGGAGAAATTACAGAGGTTCGAATTATGAGAAGTAAAGAGTCAAATGGGAATAAAGGCTTTGCATTTGTTACCTATAAAAGTGTGGAGTTGGCTTCTAAAGCAATCGATGAACTGAATAACACTGAATTCAAGGGGAAGAAGATAAAATGTTCTTCTTCTCAAGCGAAGCACCGTTTGTTCATCGGTAATGTTCCCAGGAGCTGGGGTGAGGAAGATCTCAGGAAGGTTGTGGAAGACATTGGACCTGGAGTTACTGCTGTGGAACTAGTAAAGGATATGAAGAATACTAGCAATAACAGGGGCTTTGCTTTTGTTGACTACTATAATCATGCATGTGCCGAGTACTCAAGGCAGAAGATGATGAACCCAAAATTTAAGCTAGATGATAATGCTCCAACTGTTAGTTGGGCAGACCCTAAAAATGCTGATTCATCCGCTACTTCACAGGTGAAGGCAGTTTATGTAAAGAATTTGCCAAAGAATGTAACACAGGAGCAGTTGAAAAAGCTGTTTGACCATCATGGAAAAATTACGAAAGTGGTGTTGCCTCCTGCAAAGTCTGGACAAGAGAAGAACAGAATTGGTTTTGTACATTTTTCGGAGAGGTCCAGTGCTATGAAGGCTTTAAAAAATACAGAAAAATATGAATTGGATGGTCAAGCTTTGGAGTGTTCTCTTGCAAAGCCACAGGTAGACCAGAAATCTGGTGGATCGAATAGCCAAAAGTCTGGATTGCTTCCTTACTATCCACCTCGTGTGGGATATGGCTTTGTTGGGGGTGCTTATGGTGGTGCTGTAAATGCAGGATATGGTGCTTCTGGTTTTGGTCAGCCGTTGATATATGGCAGAGGACCAACTCCAGCTGGCATGGCCATGATGCCAATGTTGCTGCCTGATGGACGGATTGGCTATGTCTTGCAACAACCAGCGTCACAAATGCTAACCCCTCCACCACATCCAAGAAGTGGCGGTGGCAGTGGCAGCAGCGGGAGTGGCGGCAAGAATGGCAGCGGCAGTTCTAGTAGGGGGAGACATTCACACGACAGTGGCGGCCATGGTCGCAGATATCGACCATATTAATTCATACTGTTGAATGGAACAAACAGAAAGGTTTTTGACGGAAGTGCCTCCCCCTCCCTCCGCCCCCTAACATTGTGATAATATTCTTCGGTGTTGATAAAGTGAAGCTAATTTGTGGGTTTTGTAATGTGTTTGCTAGTCTCCATCAATATTATTAACCTAGGTTACATTGCTTTCGGTTTTGTTCATTTTCCTCTCCACTTTTGGGCCAGAAATACGTTTTAGTTATCATTTGTGGTAAACAAAACATGGTGATCTCGAATTTGAGAATGTGTGCCTCACTGAAAGTGATGAATTGACTAAGCATAGCTGCTCCTATTTTGATGTACTATTTTAACACTAAGAATATGCATGTCGATCTTGTGGGATGGACTTGATTTTACCAATAACTG

Coding sequence (CDS)

ATGCCAAGGGGAAAGGGAAATGCTTCATCTACTGCCAGGCCAGTTGAACCTGAAAAGCCAGTTGACTCTGATGAGAGGGTGGATCTTGATGTTGATAATGATCCTGAGGAGGAGGTTATGGTAGAAGATGTTGAGTACGAAGAAGTTGAAGAGGAGGAGGTAGAAGAAATAGAAGTGGAAGAGGAGGAGGAAGAAGAGGAGGAGGAAGAGGAGGTTGAGGAAGAAGATGTGGAAGAATTGGAAGATGATGGAAATAATGACACTGGAATTAATGTCGAAAATGAAATTGGTAATGATGAGGATGAAAAGAAAAAAAATACTGAGCTTCTTGCTCTACCTCCTCATGGTTCTGAAGTATATATTGGTGGTATTCCTCAAGATTCTTCTGAAGAGGATTTGAGGAGTTTTTGTGTATCCATTGGAGAAATTACAGAGGTTCGAATTATGAGAAGTAAAGAGTCAAATGGGAATAAAGGCTTTGCATTTGTTACCTATAAAAGTGTGGAGTTGGCTTCTAAAGCAATCGATGAACTGAATAACACTGAATTCAAGGGGAAGAAGATAAAATGTTCTTCTTCTCAAGCGAAGCACCGTTTGTTCATCGGTAATGTTCCCAGGAGCTGGGGTGAGGAAGATCTCAGGAAGGTTGTGGAAGACATTGGACCTGGAGTTACTGCTGTGGAACTAGTAAAGGATATGAAGAATACTAGCAATAACAGGGGCTTTGCTTTTGTTGACTACTATAATCATGCATGTGCCGAGTACTCAAGGCAGAAGATGATGAACCCAAAATTTAAGCTAGATGATAATGCTCCAACTGTTAGTTGGGCAGACCCTAAAAATGCTGATTCATCCGCTACTTCACAGGTGAAGGCAGTTTATGTAAAGAATTTGCCAAAGAATGTAACACAGGAGCAGTTGAAAAAGCTGTTTGACCATCATGGAAAAATTACGAAAGTGGTGTTGCCTCCTGCAAAGTCTGGACAAGAGAAGAACAGAATTGGTTTTGTACATTTTTCGGAGAGGTCCAGTGCTATGAAGGCTTTAAAAAATACAGAAAAATATGAATTGGATGGTCAAGCTTTGGAGTGTTCTCTTGCAAAGCCACAGGTAGACCAGAAATCTGGTGGATCGAATAGCCAAAAGTCTGGATTGCTTCCTTACTATCCACCTCGTGTGGGATATGGCTTTGTTGGGGGTGCTTATGGTGGTGCTGTAAATGCAGGATATGGTGCTTCTGGTTTTGGTCAGCCGTTGATATATGGCAGAGGACCAACTCCAGCTGGCATGGCCATGATGCCAATGTTGCTGCCTGATGGACGGATTGGCTATGTCTTGCAACAACCAGCGTCACAAATGCTAACCCCTCCACCACATCCAAGAAGTGGCGGTGGCAGTGGCAGCAGCGGGAGTGGCGGCAAGAATGGCAGCGGCAGTTCTAGTAGGGGGAGACATTCACACGACAGTGGCGGCCATGGTCGCAGATATCGACCATATTAA

Protein sequence

MPRGKGNASSTARPVEPEKPVDSDERVDLDVDNDPEEEVMVEDVEYEEVEEEEVEEIEVEEEEEEEEEEEEVEEEDVEELEDDGNNDTGINVENEIGNDEDEKKKNTELLALPPHGSEVYIGGIPQDSSEEDLRSFCVSIGEITEVRIMRSKESNGNKGFAFVTYKSVELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVEDIGPGVTAVELVKDMKNTSNNRGFAFVDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSATSQVKAVYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQALECSLAKPQVDQKSGGSNSQKSGLLPYYPPRVGYGFVGGAYGGAVNAGYGASGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPASQMLTPPPHPRSGGGSGSSGSGGKNGSGSSSRGRHSHDSGGHGRRYRPY

Homology

[Close]

BLAST of Sed0012361 vs. NCBI nr
Match: XP_038902706.1 (heterogeneous nuclear ribonucleoprotein Q [Benincasa hispida] >XP_038902707.1 heterogeneous nuclear ribonucleoprotein Q [Benincasa hispida] >XP_038902708.1 heterogeneous nuclear ribonucleoprotein Q [Benincasa hispida])

HSP 1 Score: 834.7 bits (2155), Expect = 4.1e-238
Identity = 462/514 (89.88%), Postives = 472/514 (91.83%), Query Frame = 0


Query: 1   MPRGKGNASSTARPV------EPEKPVDSDERVDLDVDNDPEEEVMVEDVEYEEV-EEEE 60
           MPRGKGNASSTARPV      EPEKP DSDERVDL+VDNDP EEVM EDVEYEEV EEEE
Sbjct: 1   MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLEVDNDP-EEVMEEDVEYEEVEEEEE 60

Query: 61  VEEI-EVEEEEEEEEEEEEVEEEDVEELEDDGNNDTGINVENEIGNDEDEKKKNTELLAL 120
           VEEI EVEEEEEEEEEEEE EEEDVEE+EDDG N+ GIN +NEI NDEDEKKK+ ELLAL
Sbjct: 61  VEEIEEVEEEEEEEEEEEEGEEEDVEEVEDDGTNENGINAQNEISNDEDEKKKHAELLAL 120

Query: 121 PPHGSEVYIGGIPQDSSEEDLRSFCVSIGEITEVRIMRSKESNGNKGFAFVTYKSVELAS 180
           PPHGSEVY+GGIPQDSSEEDLRSFC SIGE+TEVRIMRSKESN NKGFAFVTY+SVELAS
Sbjct: 121 PPHGSEVYVGGIPQDSSEEDLRSFCESIGEVTEVRIMRSKESNENKGFAFVTYRSVELAS 180

Query: 181 KAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVEDIGPGVTAVELVKD 240
           KAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVV DIGPGVTAVELVKD
Sbjct: 181 KAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTAVELVKD 240

Query: 241 MKNTSNNRGFAFVDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSATSQVKA 300
           MKNTSNNRGFAF+DYYNH+CAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSA SQVKA
Sbjct: 241 MKNTSNNRGFAFIDYYNHSCAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300

Query: 301 VYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360
           VYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT
Sbjct: 301 VYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360

Query: 361 EKYELDGQALECSLAKPQVDQKSGGSNSQKSGLLPYYPPRVGYGFVGGAYGGAVNAGYGA 420
           EKYELDGQ LECSLAKPQ DQKSGGSNSQKSGLLP YPPRVGYGFVGGAYGG VNAGYGA
Sbjct: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGG-VNAGYGA 420

Query: 421 SGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPASQMLTPPPHPRSGGGSGSSGSG 480
           SGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQP SQMLTPPPHPRSGGG G  G G
Sbjct: 421 SGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGGGGGGG 480

Query: 481 --GKNGSGSSSRGRHSHDS-----GGHGRRYRPY 500
             G    GSSSRGRHSHD      GGHGRRYRPY
Sbjct: 481 GSGSKSGGSSSRGRHSHDGGHGGHGGHGRRYRPY 512

[Close]

BLAST of Sed0012361 vs. NCBI nr
Match: XP_022153053.1 (heterogeneous nuclear ribonucleoprotein Q [Momordica charantia] >XP_022153054.1 heterogeneous nuclear ribonucleoprotein Q [Momordica charantia] >XP_022153055.1 heterogeneous nuclear ribonucleoprotein Q [Momordica charantia])

HSP 1 Score: 830.9 bits (2145), Expect = 6.0e-237
Identity = 459/513 (89.47%), Postives = 472/513 (92.01%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEP------EKPVDSDERVDLDVDNDPEEEVMVEDVEYEEV-EEEE 60
           MPRGKGNASSTARPVEP      EKPVDSDERVDLDVDNDP EE M EDVEYEEV EEEE
Sbjct: 1   MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDP-EETMEEDVEYEEVEEEEE 60

Query: 61  VEEI-------EVEEEEEEEEEEEEVEEEDVEELEDDGNNDTGINVENEIGNDEDEKKKN 120
           VEEI       E EEEEEEEEEEEE EEEDVEE+ED GNND G + +NEIGNDEDEKK++
Sbjct: 61  VEEIEEVEEEEEEEEEEEEEEEEEEGEEEDVEEVEDGGNNDNGNDAQNEIGNDEDEKKRH 120

Query: 121 TELLALPPHGSEVYIGGIPQDSSEEDLRSFCVSIGEITEVRIMRSKESNGNKGFAFVTYK 180
            ELLALPPHGSEVYIGGIPQDSSEEDLRSFC SIGE+TEVRIMRSK+SN NKGF+FVTYK
Sbjct: 121 AELLALPPHGSEVYIGGIPQDSSEEDLRSFCASIGEVTEVRIMRSKDSNENKGFSFVTYK 180

Query: 181 SVELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVEDIGPGVTA 240
           SVELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVV DIGPGVTA
Sbjct: 181 SVELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTA 240

Query: 241 VELVKDMKNTSNNRGFAFVDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSA 300
           VELVKDMKNTSNNRGFAF+DYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSA
Sbjct: 241 VELVKDMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSA 300

Query: 301 TSQVKAVYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAM 360
            SQVKAVYVKNLPKNVTQEQLK+LFDHHGKITKVVLPPAKSGQEKNRIGFVHF+ERSSAM
Sbjct: 301 ASQVKAVYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKSGQEKNRIGFVHFAERSSAM 360

Query: 361 KALKNTEKYELDGQALECSLAKPQVDQKSGGSNSQKSGLLPYYPPRVGYGFVGGAYGGAV 420
           KALKNTEKYELDGQ LECSLAKPQ DQKSGGSNSQKSGLLP YPPRVGYG+VGGAYGGAV
Sbjct: 361 KALKNTEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGYVGGAYGGAV 420

Query: 421 NAGYGASGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPASQMLTPPPHPRSGGGS 480
           NAGYGAS F QPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQP SQMLTPPPHPRSGGG 
Sbjct: 421 NAGYGASSFSQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGG- 480

Query: 481 GSSGSGGKNGSGSSSRGRHSHDSGGHGRRYRPY 500
              GSG KNG GSSSRGRH+HDS GHGRRYRPY
Sbjct: 481 ---GSGSKNG-GSSSRGRHTHDS-GHGRRYRPY 506

[Close]

BLAST of Sed0012361 vs. NCBI nr
Match: XP_008449579.1 (PREDICTED: nucleolin [Cucumis melo] >XP_008449580.1 PREDICTED: nucleolin [Cucumis melo])

HSP 1 Score: 829.7 bits (2142), Expect = 1.3e-236
Identity = 460/518 (88.80%), Postives = 474/518 (91.51%), Query Frame = 0


Query: 1   MPRGKGNASSTARPV------EPEKPVDSDERVDLDVDNDPEEEVMVEDVEYEEV-EEEE 60
           MPRGKGNASSTARPV      EPEKP DSDERVDLDVDNDP EEVM EDVEYEEV EEEE
Sbjct: 1   MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLDVDNDP-EEVMEEDVEYEEVEEEEE 60

Query: 61  VEEI-EVEEEEEEEEEEEEVEEEDVEELEDDGNNDTGINVENEIGNDEDEKKKNTELLAL 120
           VEEI EVEEEEEEEEEEEE +EEDVEE+EDDG N+ GINV+NE  NDEDEKKK+ ELLAL
Sbjct: 61  VEEIEEVEEEEEEEEEEEEGDEEDVEEVEDDGTNENGINVQNETINDEDEKKKHAELLAL 120

Query: 121 PPHGSEVYIGGIPQDSSEEDLRSFCVSIGEITEVRIMRSKESNGNKGFAFVTYKSVELAS 180
           PPHGSEVY+GGIPQDSSE+DLR FC SIGE+TEVR+MRSKESN NKGFAFVT++SVELAS
Sbjct: 121 PPHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELAS 180

Query: 181 KAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVEDIGPGVTAVELVKD 240
           KAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDL+KVV +IGPGVTAVELVKD
Sbjct: 181 KAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKD 240

Query: 241 MKNTSNNRGFAFVDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSATSQVKA 300
           MKNTSNNRGFAF+DYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSA SQVKA
Sbjct: 241 MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300

Query: 301 VYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360
           VYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT
Sbjct: 301 VYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360

Query: 361 EKYELDGQALECSLAKPQVDQKSGGSNSQKSGLLPYYPPRVGYGFVGGAYGGAVNAGYGA 420
           EKYELDGQ LECSLAKPQ DQKSGGSNSQKSGLLP YPPRVGYGFVGGAY GAVNAGYGA
Sbjct: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAY-GAVNAGYGA 420

Query: 421 SGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPASQMLTPPPHPRSGGGSGSSGSG 480
           SGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQP SQMLTPPPHPRSGGG G SG G
Sbjct: 421 SGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGGGSGGG 480

Query: 481 -GKNGSGSSSRGRHSHDS----------GGHGRRYRPY 500
            G   SGSSSRGRHSHDS          GGHGRRYRPY
Sbjct: 481 SGSKNSGSSSRGRHSHDSGHGGGHGGGHGGHGRRYRPY 516

[Close]

BLAST of Sed0012361 vs. NCBI nr
Match: KAG6605979.1 (Heterogeneous nuclear ribonucleoprotein Q, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 827.8 bits (2137), Expect = 5.0e-236
Identity = 459/508 (90.35%), Postives = 470/508 (92.52%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEP------EKPVDSDERVDLDVDNDPEEEVMVEDVEYEEV-EEEE 60
           MPRGKGNASSTARPVEP      EKPVDSDERVDLDVDNDP EEVM EDVEYEEV EEEE
Sbjct: 205 MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDP-EEVMEEDVEYEEVEEEEE 264

Query: 61  VEEI-EVEEEEEEEEEEEEVEEEDVEELEDDGNNDTGINVENEIGNDEDEKKKNTELLAL 120
           VEEI EVEEEEEEE EEEEVEEEDVE +ED GNND GIN +NE G DEDEKKK+ ELLAL
Sbjct: 265 VEEIEEVEEEEEEEVEEEEVEEEDVEGVEDGGNNDNGINAQNENGIDEDEKKKHDELLAL 324

Query: 121 PPHGSEVYIGGIPQDSSEEDLRSFCVSIGEITEVRIMRSKESNGNKGFAFVTYKSVELAS 180
           PPHGSEVYIGGIPQD+SEEDLRSFC SIGE+TEVRIM+SK+SN NKGFAFVTYKSVELAS
Sbjct: 325 PPHGSEVYIGGIPQDTSEEDLRSFCASIGEVTEVRIMKSKDSNENKGFAFVTYKSVELAS 384

Query: 181 KAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVEDIGPGVTAVELVKD 240
           KAID LNNTEFKGKKIKCSSSQAKHRLF+GNVPRSWGEEDLRKVV DIGPGVTAVELVKD
Sbjct: 385 KAIDGLNNTEFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVKD 444

Query: 241 MKNTSNNRGFAFVDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSATSQVKA 300
           MKNTSNNRGFAF+DYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSA SQVKA
Sbjct: 445 MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 504

Query: 301 VYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360
           VYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT
Sbjct: 505 VYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 564

Query: 361 EKYELDGQALECSLAKPQVDQKSGGSNSQKSGLLPYYPPRVGYGFVGGAYGGAVNAGYGA 420
           EKYELDGQ LECSLAKPQ DQKSGGSNSQKSGLLP YPPRVGYGFVGGAY GAVN GYGA
Sbjct: 565 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAY-GAVNPGYGA 624

Query: 421 SGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPASQMLTPPPHPRSGGGSGSSGSG 480
           SGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQP SQM+TPPPHPRSGGGSGS G  
Sbjct: 625 SGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGGGSGSGGGS 684

Query: 481 GKNGSGSSSR-GRHSHDSGGHGRRYRPY 500
           G    GSSSR GRH+HDS GHGRRYRPY
Sbjct: 685 GSKSGGSSSRGGRHTHDS-GHGRRYRPY 709

[Close]

BLAST of Sed0012361 vs. NCBI nr
Match: XP_023533658.1 (heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita pepo subsp. pepo] >XP_023533659.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita pepo subsp. pepo] >XP_023533660.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 825.9 bits (2132), Expect = 1.9e-235
Identity = 461/511 (90.22%), Postives = 473/511 (92.56%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEP------EKPVDSDERVDLDVDNDPEEEVMVEDVEYEEV-EEEE 60
           MPRGKGNASSTARPVEP      EKPVDSDERVDLDVDNDP EEVM EDVEYEEV EEEE
Sbjct: 1   MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDP-EEVMEEDVEYEEVEEEEE 60

Query: 61  VEEI-EVEEEEEEEE-EEEEVEEEDVEELEDDGNNDTGINVENEIGNDEDEKKKNTELLA 120
           VEEI EVEEEEEEEE EEEEVEEEDVE +ED GNND GIN +NE G DEDEKKK+ ELLA
Sbjct: 61  VEEIEEVEEEEEEEEVEEEEVEEEDVEGVEDGGNNDNGINAQNENGIDEDEKKKHDELLA 120

Query: 121 LPPHGSEVYIGGIPQDSSEEDLRSFCVSIGEITEVRIMRSKESNGNKGFAFVTYKSVELA 180
           LPPHGSEVYIGGIPQD+SEEDLRSFCVSIGE+TEVRIM+SK+SN NKGFAFVTYKSVELA
Sbjct: 121 LPPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELA 180

Query: 181 SKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVEDIGPGVTAVELVK 240
           SKAID LNNTEFKGKKIKCSSSQAKHRLF+GNVPRSWGEEDLRKVV DIGPGVTAVELVK
Sbjct: 181 SKAIDGLNNTEFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVK 240

Query: 241 DMKNTSNNRGFAFVDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSATSQVK 300
           DMKNTSNNRGFAF+DYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSA SQVK
Sbjct: 241 DMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVK 300

Query: 301 AVYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKN 360
           AVYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKN
Sbjct: 301 AVYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKN 360

Query: 361 TEKYELDGQALECSLAKPQVDQKSGGSNSQKSGLLPYYPPRVGYGFVGGAYGGAVNAGYG 420
           TEKYELDGQ LECSLAKPQ DQKSGGSNSQKSGLLP YPPRVGYGFVGGAY GAVN GYG
Sbjct: 361 TEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAY-GAVNPGYG 420

Query: 421 ASGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPASQMLTPPPHPRSGGGSGS--- 480
           ASGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQP SQM+TPPPHPRSGGGSGS   
Sbjct: 421 ASGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGGGSGSGSG 480

Query: 481 SGSGGKNGSGSSSRGRHSHDSGGHGRRYRPY 500
            GSG K+G  SS  GRH+HDS GHGRRYRPY
Sbjct: 481 GGSGSKSGGSSSRGGRHTHDS-GHGRRYRPY 508

[Close]

BLAST of Sed0012361 vs. ExPASy Swiss-Prot
Match: Q9ASP6 (Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana OX=3702 GN=LIF2 PE=1 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 3.0e-114
Identity = 253/501 (50.50%), Postives = 345/501 (68.86%), Query Frame = 0


Query: 22  DSDERVDLDVDNDPEEEVMVEDVEYEEVEEEEVEEIEVEEEEEEEEEEEEVEE------- 81
           D+D+RVD +  +  E E  VE+ + EE EEEE E+ + ++   +  EE EVE+       
Sbjct: 6   DNDDRVDFEEGSYSEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDYGDTKGG 65

Query: 82  --EDV-EELEDDGNNDTGINVENEIGN-----DEDEKKKNTELLALPPHGSEVYIGGIPQ 141
             EDV EE+ +D +N   I   ++        D+++++K + LL+LPPHGSEV+IGG+P+
Sbjct: 66  DMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIGGLPR 125

Query: 142 DSSEEDLRSFCVSIGEITEVRIMRSKESNGNKGFAFVTYKSVELASKAIDELNNTEFKGK 201
           D  EEDLR  C  IGEI EVR+M+ ++S  +KG+AFV +K+ ++A KAI+EL++ EFKGK
Sbjct: 126 DVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFKGK 185

Query: 202 KIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVEDIGPGVTAVELVKDMKNTSNNRGFAFVD 261
            I+CS S+ K+RLFIGN+P++W E++ RKV+ED+GPGV  +EL+KD  NT+ NRGFAFV 
Sbjct: 186 TIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNRGFAFVL 245

Query: 262 YYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNA--DSSATSQVKAVYVKNLPKNVTQ 321
           YYN+ACA+YSRQKM++  FKL+ NAPTV+WADPK++   S+A +QVKA+YVKN+P+N + 
Sbjct: 246 YYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPENTST 305

Query: 322 EQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQALEC 381
           EQLK+LF  HG++TK+V PP K G  K   GFVH++ERSSA+KA+K+TE+YE++GQ LE 
Sbjct: 306 EQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVNGQPLEV 365

Query: 382 SLAKPQVDQKSGGSNSQKSGL---LPYYPPRVGYGFVGGAYGGAVNAGYGASG-FGQPLI 441
            LAKPQ ++K   S+          P+  P  G GF    Y GA+ AG G +G F QP+I
Sbjct: 366 VLAKPQAERKHDPSSYSYGAAPTPAPFVHPTFG-GFAAAPY-GAMGAGLGIAGSFSQPMI 425

Query: 442 YGRGPTPAGMAMMPMLLPDGRIGYVLQQPASQMLTPPPH--PRSGGGSGSSGSGGKNGSG 500
           YGRG  P GM M+PMLLPDGR+GYVLQQP   M   PP    R+   +GSSG  G++ S 
Sbjct: 426 YGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSGRDNS- 485

[Close]

BLAST of Sed0012361 vs. ExPASy Swiss-Prot
Match: Q7TP47 (Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.7e-37
Identity = 100/313 (31.95%), Postives = 163/313 (52.08%), Query Frame = 0


Query: 113 PPHGSEVYIGGIPQDSSEEDLRSFCVSIGEITEVRIMRSKESNGNKGFAFVTYKSVELAS 172
           P  G+E+++G IP+D  E++L       G I ++R+M    +  N+G+AFVT+ + E A 
Sbjct: 68  PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 127

Query: 173 KAIDELNNTEFK-GKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVEDIGPGVTAVELVK 232
           +A+   NN E + GK I    S A +RLF+G++P+S  +E + +    +  G+T V L  
Sbjct: 128 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 187

Query: 233 DMKNTSNNRGFAFVDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADP-KNADSSATSQV 292
              +   NRGF F++Y +H  A  +R+++M+ K K+  N  TV WADP ++ D    ++V
Sbjct: 188 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 247

Query: 293 KAVYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALK 352
           K ++V+NL   VT+E L+K F   GK+ +V        ++     F+HF ER  A+KA++
Sbjct: 248 KVLFVRNLANTVTEEILEKSFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 307

Query: 353 NTEKYELDGQALECSLAKP-------QVDQKSGGSNSQKSGLLPYYPPRVGYGFVGGAYG 412
                +L+G+ +E   AKP       +  Q+    N        Y PP +     G   G
Sbjct: 308 EMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGRG 367

Query: 413 GAVNAGYGASGFG 417
           G    GY    +G
Sbjct: 368 GRGGYGYPPDYYG 372

[Close]

BLAST of Sed0012361 vs. ExPASy Swiss-Prot
Match: O43390 (Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 2.0e-33
Identity = 125/427 (29.27%), Postives = 200/427 (46.84%), Query Frame = 0


Query: 113 PPHGSEVYIGGIPQDSSEEDLRSFCVSIGEITEVRIMRSKESNGNKGFAFVTYKSVELAS 172
           P  G+EV++G IP+D  E++L       G I ++R+M    S  N+G+AF+T+   E A 
Sbjct: 161 PGIGTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQ 220

Query: 173 KAIDELNNTEFK-GKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVEDIGPGVTAVELVK 232
           +A+   ++ E + GK +    S A +RLF+G++P++  +E++ +    +  G+  V L  
Sbjct: 221 EAVKLCDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYH 280

Query: 233 DMKNTSNNRGFAFVDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADP-KNADSSATSQV 292
              +   NRGF F++Y +H  A  +R+++M+ K K+  N  TV WADP +  D    ++V
Sbjct: 281 QPDDKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKV 340

Query: 293 KAVYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALK 352
           K ++V+NL   VT+E L+K F   GK+ +V        ++     FVHF +R +A+KA+ 
Sbjct: 341 KVLFVRNLATTVTEEILEKSFSEFGKLERV--------KKLKDYAFVHFEDRGAAVKAMD 400

Query: 353 NTEKYELDGQALECSLAKP----QVDQKSGGSNSQKSGLLPYY---PPRV---------- 412
                E++G+ +E  LAKP    + ++++    S+ +    YY   PPR+          
Sbjct: 401 EMNGKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAYEDYYYHPPPRMPPPIRGRGRG 460

Query: 413 ----GYGFVGGAYG-------------GAVNAGYGASGFGQP---LIYGRG--------- 472
               GYG+    YG                  GY    +G      + GRG         
Sbjct: 461 GGRGGYGYPPDYYGYEDYYDDYYGYDYHDYRGGYEDPYYGYDDGYAVRGRGGGRGGRGAP 520

Query: 473 PTPAGMAMMPMLLPDGRIGYVLQQPASQMLTPPPHPRSGGGSGSSGSGGKNGSGSSSRGR 492
           P P G    P   P GR GY         L PP   R G G  +    G+   G  SRG 
Sbjct: 521 PPPRGRGAPP---PRGRAGY---SQRGAPLGPPRGSRGGRGGPAQQQRGRGSRG--SRGN 571

[Close]

BLAST of Sed0012361 vs. ExPASy Swiss-Prot
Match: O60506 (Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens OX=9606 GN=SYNCRIP PE=1 SV=2)

HSP 1 Score: 143.3 bits (360), Expect = 7.5e-33
Identity = 128/417 (30.70%), Postives = 196/417 (47.00%), Query Frame = 0


Query: 113 PPHGSEVYIGGIPQDSSEEDLRSFCVSIGEITEVRIMRSKESNGNKGFAFVTYKSVELAS 172
           P  G+E+++G IP+D  E++L       G I ++R+M    +  N+G+AFVT+ + E A 
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217

Query: 173 KAIDELNNTEFK-GKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVEDIGPGVTAVELVK 232
           +A+   NN E + GK I    S A +RLF+G++P+S  +E + +    +  G+T V L  
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277

Query: 233 DMKNTSNNRGFAFVDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADP-KNADSSATSQV 292
              +   NRGF F++Y +H  A  +R+++M+ K K+  N  TV WADP ++ D    ++V
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337

Query: 293 KAVYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALK 352
           K ++V+NL   VT+E L+K F   GK+ +V        ++     F+HF ER  A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKAFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 397

Query: 353 NTEKYELDGQALECSLAKPQVDQKSGGSNSQKSGLL------------PYYPP------- 412
                +L+G+ +E   AKP  DQK     +Q+                P+ PP       
Sbjct: 398 EMNGKDLEGENIEIVFAKPP-DQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGR 457

Query: 413 --RVGYGFVGGAYGGAVNAGYGA-------SGFGQPLIYGRGPTPAGMAMMPMLLPDGRI 472
             R GYG+    YG      Y          G+  P  YG      G          G  
Sbjct: 458 GGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGGYEDP-YYGYEDFQVGAR------GRGGR 517

Query: 473 GYVLQQPASQMLTPPPHPRSG----GGSGSS-GSGGKNGSGSSSRGRHSHDS-GGHG 494
           G     P+      PP  R+G    GG GS+ G  G  G     RGR    + GG G
Sbjct: 518 GARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARGGAQQQRGRGVRGARGGRG 558

[Close]

BLAST of Sed0012361 vs. ExPASy Swiss-Prot
Match: Q7TMK9 (Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=2)

HSP 1 Score: 142.9 bits (359), Expect = 9.8e-33
Identity = 128/417 (30.70%), Postives = 196/417 (47.00%), Query Frame = 0


Query: 113 PPHGSEVYIGGIPQDSSEEDLRSFCVSIGEITEVRIMRSKESNGNKGFAFVTYKSVELAS 172
           P  G+E+++G IP+D  E++L       G I ++R+M    +  N+G+AFVT+ + E A 
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217

Query: 173 KAIDELNNTEFK-GKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVEDIGPGVTAVELVK 232
           +A+   NN E + GK I    S A +RLF+G++P+S  +E + +    +  G+T V L  
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277

Query: 233 DMKNTSNNRGFAFVDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADP-KNADSSATSQV 292
              +   NRGF F++Y +H  A  +R+++M+ K K+  N  TV WADP ++ D    ++V
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337

Query: 293 KAVYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALK 352
           K ++V+NL   VT+E L+K F   GK+ +V        ++     F+HF ER  A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKSFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 397

Query: 353 NTEKYELDGQALECSLAKPQVDQKSGGSNSQKSGLL------------PYYPP------- 412
                +L+G+ +E   AKP  DQK     +Q+                P+ PP       
Sbjct: 398 EMNGKDLEGENIEIVFAKPP-DQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGR 457

Query: 413 --RVGYGFVGGAYGGAVNAGYGA-------SGFGQPLIYGRGPTPAGMAMMPMLLPDGRI 472
             R GYG+    YG      Y          G+  P  YG      G          G  
Sbjct: 458 GGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGGYEDP-YYGYEDFQVGAR------GRGGR 517

Query: 473 GYVLQQPASQMLTPPPHPRSG----GGSGSS-GSGGKNGSGSSSRGRHSHDS-GGHG 494
           G     P+      PP  R+G    GG GS+ G  G  G     RGR    + GG G
Sbjct: 518 GARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARGGAQQQRGRGVRGARGGRG 558

[Close]

BLAST of Sed0012361 vs. ExPASy TrEMBL
Match: A0A6J1DHV9 (heterogeneous nuclear ribonucleoprotein Q OS=Momordica charantia OX=3673 GN=LOC111020649 PE=4 SV=1)

HSP 1 Score: 830.9 bits (2145), Expect = 2.9e-237
Identity = 459/513 (89.47%), Postives = 472/513 (92.01%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEP------EKPVDSDERVDLDVDNDPEEEVMVEDVEYEEV-EEEE 60
           MPRGKGNASSTARPVEP      EKPVDSDERVDLDVDNDP EE M EDVEYEEV EEEE
Sbjct: 1   MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDP-EETMEEDVEYEEVEEEEE 60

Query: 61  VEEI-------EVEEEEEEEEEEEEVEEEDVEELEDDGNNDTGINVENEIGNDEDEKKKN 120
           VEEI       E EEEEEEEEEEEE EEEDVEE+ED GNND G + +NEIGNDEDEKK++
Sbjct: 61  VEEIEEVEEEEEEEEEEEEEEEEEEGEEEDVEEVEDGGNNDNGNDAQNEIGNDEDEKKRH 120

Query: 121 TELLALPPHGSEVYIGGIPQDSSEEDLRSFCVSIGEITEVRIMRSKESNGNKGFAFVTYK 180
            ELLALPPHGSEVYIGGIPQDSSEEDLRSFC SIGE+TEVRIMRSK+SN NKGF+FVTYK
Sbjct: 121 AELLALPPHGSEVYIGGIPQDSSEEDLRSFCASIGEVTEVRIMRSKDSNENKGFSFVTYK 180

Query: 181 SVELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVEDIGPGVTA 240
           SVELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVV DIGPGVTA
Sbjct: 181 SVELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTA 240

Query: 241 VELVKDMKNTSNNRGFAFVDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSA 300
           VELVKDMKNTSNNRGFAF+DYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSA
Sbjct: 241 VELVKDMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSA 300

Query: 301 TSQVKAVYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAM 360
            SQVKAVYVKNLPKNVTQEQLK+LFDHHGKITKVVLPPAKSGQEKNRIGFVHF+ERSSAM
Sbjct: 301 ASQVKAVYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKSGQEKNRIGFVHFAERSSAM 360

Query: 361 KALKNTEKYELDGQALECSLAKPQVDQKSGGSNSQKSGLLPYYPPRVGYGFVGGAYGGAV 420
           KALKNTEKYELDGQ LECSLAKPQ DQKSGGSNSQKSGLLP YPPRVGYG+VGGAYGGAV
Sbjct: 361 KALKNTEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGYVGGAYGGAV 420

Query: 421 NAGYGASGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPASQMLTPPPHPRSGGGS 480
           NAGYGAS F QPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQP SQMLTPPPHPRSGGG 
Sbjct: 421 NAGYGASSFSQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGG- 480

Query: 481 GSSGSGGKNGSGSSSRGRHSHDSGGHGRRYRPY 500
              GSG KNG GSSSRGRH+HDS GHGRRYRPY
Sbjct: 481 ---GSGSKNG-GSSSRGRHTHDS-GHGRRYRPY 506

[Close]

BLAST of Sed0012361 vs. ExPASy TrEMBL
Match: A0A1S3BMC2 (nucleolin OS=Cucumis melo OX=3656 GN=LOC103491420 PE=4 SV=1)

HSP 1 Score: 829.7 bits (2142), Expect = 6.4e-237
Identity = 460/518 (88.80%), Postives = 474/518 (91.51%), Query Frame = 0


Query: 1   MPRGKGNASSTARPV------EPEKPVDSDERVDLDVDNDPEEEVMVEDVEYEEV-EEEE 60
           MPRGKGNASSTARPV      EPEKP DSDERVDLDVDNDP EEVM EDVEYEEV EEEE
Sbjct: 1   MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLDVDNDP-EEVMEEDVEYEEVEEEEE 60

Query: 61  VEEI-EVEEEEEEEEEEEEVEEEDVEELEDDGNNDTGINVENEIGNDEDEKKKNTELLAL 120
           VEEI EVEEEEEEEEEEEE +EEDVEE+EDDG N+ GINV+NE  NDEDEKKK+ ELLAL
Sbjct: 61  VEEIEEVEEEEEEEEEEEEGDEEDVEEVEDDGTNENGINVQNETINDEDEKKKHAELLAL 120

Query: 121 PPHGSEVYIGGIPQDSSEEDLRSFCVSIGEITEVRIMRSKESNGNKGFAFVTYKSVELAS 180
           PPHGSEVY+GGIPQDSSE+DLR FC SIGE+TEVR+MRSKESN NKGFAFVT++SVELAS
Sbjct: 121 PPHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELAS 180

Query: 181 KAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVEDIGPGVTAVELVKD 240
           KAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDL+KVV +IGPGVTAVELVKD
Sbjct: 181 KAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKD 240

Query: 241 MKNTSNNRGFAFVDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSATSQVKA 300
           MKNTSNNRGFAF+DYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSA SQVKA
Sbjct: 241 MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300

Query: 301 VYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360
           VYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT
Sbjct: 301 VYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360

Query: 361 EKYELDGQALECSLAKPQVDQKSGGSNSQKSGLLPYYPPRVGYGFVGGAYGGAVNAGYGA 420
           EKYELDGQ LECSLAKPQ DQKSGGSNSQKSGLLP YPPRVGYGFVGGAY GAVNAGYGA
Sbjct: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAY-GAVNAGYGA 420

Query: 421 SGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPASQMLTPPPHPRSGGGSGSSGSG 480
           SGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQP SQMLTPPPHPRSGGG G SG G
Sbjct: 421 SGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGGGSGGG 480

Query: 481 -GKNGSGSSSRGRHSHDS----------GGHGRRYRPY 500
            G   SGSSSRGRHSHDS          GGHGRRYRPY
Sbjct: 481 SGSKNSGSSSRGRHSHDSGHGGGHGGGHGGHGRRYRPY 516

[Close]

BLAST of Sed0012361 vs. ExPASy TrEMBL
Match: A0A0A0KI54 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425690 PE=4 SV=1)

HSP 1 Score: 823.9 bits (2127), Expect = 3.5e-235
Identity = 459/516 (88.95%), Postives = 474/516 (91.86%), Query Frame = 0


Query: 1   MPRGKGNASSTARPV------EPEKPVDSDERVDLDVDNDPEEEVMVEDVEYEEV-EEEE 60
           MPRGKGNASSTARPV      EPEKP DSDERVDLDVDNDP EEVM EDVEYEEV EEEE
Sbjct: 1   MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLDVDNDP-EEVMEEDVEYEEVEEEEE 60

Query: 61  VEEI-EVEEEEEEEEEEEEVEEEDVEELEDDGNNDTGINVENEIGNDEDEKKKNTELLAL 120
           VEEI EVEEEEEEEE+EEE +EEDVEE+EDDG ND GIN +NE  NDEDE KK+ ELLAL
Sbjct: 61  VEEIEEVEEEEEEEEDEEEGDEEDVEEVEDDGTNDNGINSQNETINDEDETKKHAELLAL 120

Query: 121 PPHGSEVYIGGIPQDSSEEDLRSFCVSIGEITEVRIMRSKESNGNKGFAFVTYKSVELAS 180
           PPHGSEVY+GGIPQDSSE+DLR FC SIGE+TEVR+MRSKESN NKGFAFVT++SVELAS
Sbjct: 121 PPHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELAS 180

Query: 181 KAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVEDIGPGVTAVELVKD 240
           KAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDL+KVV +IGPGVTAVELVKD
Sbjct: 181 KAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKD 240

Query: 241 MKNTSNNRGFAFVDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSATSQVKA 300
           MKNTSNNRGFAF+DYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSA SQVKA
Sbjct: 241 MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300

Query: 301 VYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360
           VYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT
Sbjct: 301 VYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360

Query: 361 EKYELDGQALECSLAKPQVDQKSGGSNSQKSGLLPYYPPRVGYGFVGGAYGGAVNAGYGA 420
           EKYELDGQ LECSLAKPQ DQKSGGSNSQKSGLLP YPPRVGYGFVGGAY GAVNAGYG 
Sbjct: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAY-GAVNAGYGG 420

Query: 421 SGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPASQMLTPPPHPRSGGGSGSSGSG 480
           SGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQP SQMLTPPPHPRSGGG GS GSG
Sbjct: 421 SGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGG-GSGGSG 480

Query: 481 GKNGS---GSSSRGRHSHDS------GGHGRRYRPY 500
           G +GS   GSSSRGRHSHDS      GGHGRRYRPY
Sbjct: 481 GGSGSKNGGSSSRGRHSHDSGHGGGHGGHGRRYRPY 513

[Close]

BLAST of Sed0012361 vs. ExPASy TrEMBL
Match: A0A6J1H0I9 (heterogeneous nuclear ribonucleoprotein Q-like OS=Cucurbita moschata OX=3662 GN=LOC111459318 PE=4 SV=1)

HSP 1 Score: 823.5 bits (2126), Expect = 4.6e-235
Identity = 460/511 (90.02%), Postives = 472/511 (92.37%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEP------EKPVDSDERVDLDVDNDPEEEVMVEDVEYEEV-EEEE 60
           MPRGKGNASSTARPVEP      EKPVDSDERVDLDVDNDP EEVM EDVEYEEV EEEE
Sbjct: 1   MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDP-EEVMEEDVEYEEVEEEEE 60

Query: 61  VEEI-EVEEEEEEEE-EEEEVEEEDVEELEDDGNNDTGINVENEIGNDEDEKKKNTELLA 120
           VEEI EVEEEEEEEE EEEEVEEEDVE +ED GNND GIN +NE G DEDEKKK+ ELLA
Sbjct: 61  VEEIEEVEEEEEEEEVEEEEVEEEDVEGVEDGGNNDNGINAQNENGIDEDEKKKHDELLA 120

Query: 121 LPPHGSEVYIGGIPQDSSEEDLRSFCVSIGEITEVRIMRSKESNGNKGFAFVTYKSVELA 180
           LPPHGSEVYIGGIPQD+SEEDLRSFCVSIGE+TEVRIM+SK+SN NKGFAFVTYKSVELA
Sbjct: 121 LPPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELA 180

Query: 181 SKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVEDIGPGVTAVELVK 240
           SKAID LNNTEFKGKKIKCSSSQAKHRLF+GNVPRSWGEEDLRKVV DIGPGVTAVELVK
Sbjct: 181 SKAIDGLNNTEFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVK 240

Query: 241 DMKNTSNNRGFAFVDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSATSQVK 300
           DMKNTSNNRGFAF+DYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSA SQVK
Sbjct: 241 DMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVK 300

Query: 301 AVYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKN 360
           AVYVKNLPK VTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKN
Sbjct: 301 AVYVKNLPKTVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKN 360

Query: 361 TEKYELDGQALECSLAKPQVDQKSGGSNSQKSGLLPYYPPRVGYGFVGGAYGGAVNAGYG 420
           TEKYELDGQ LECSLAKPQ DQKSGGSNSQKSGLLP YPPRVGYGFVGGAY GAVN GYG
Sbjct: 361 TEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAY-GAVNPGYG 420

Query: 421 ASGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPASQMLTPPPHPRSGGGSGS--- 480
           ASGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQP SQM+TPPPHPRSGGGSGS   
Sbjct: 421 ASGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGGGSGSGSG 480

Query: 481 SGSGGKNGSGSSSRGRHSHDSGGHGRRYRPY 500
            GSG K+G  SS  GRH+HDS GHGRRYRPY
Sbjct: 481 GGSGSKSGGSSSRGGRHTHDS-GHGRRYRPY 508

[Close]

BLAST of Sed0012361 vs. ExPASy TrEMBL
Match: A0A6J1K6U6 (heterogeneous nuclear ribonucleoprotein Q-like OS=Cucurbita maxima OX=3661 GN=LOC111490724 PE=4 SV=1)

HSP 1 Score: 823.2 bits (2125), Expect = 6.0e-235
Identity = 455/510 (89.22%), Postives = 468/510 (91.76%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEP------EKPVDSDERVDLDVDNDPEEEVMVEDVEYEEVEE--- 60
           MPRGK NASSTARPVEP      EKPVDSDERVDLDVDNDP EEVM EDVEYEEVEE   
Sbjct: 1   MPRGKENASSTARPVEPEKKNESEKPVDSDERVDLDVDNDP-EEVMEEDVEYEEVEEEEE 60

Query: 61  -EEVEEIEVEEEEEEEEEEEEVEEEDVEELEDDGNNDTGINVENEIGNDEDEKKKNTELL 120
            EE+EE+E EEEEEE EEEEEVEEEDVE +ED GNND GIN +NE   DEDEKKK+ ELL
Sbjct: 61  VEEIEEVEEEEEEEEVEEEEEVEEEDVEGVEDVGNNDNGINAQNENSIDEDEKKKHDELL 120

Query: 121 ALPPHGSEVYIGGIPQDSSEEDLRSFCVSIGEITEVRIMRSKESNGNKGFAFVTYKSVEL 180
           ALPPHGSEVYIGGIPQD+SEEDLRSFCVSIGE+TEVRIM+SK+SN NKGFAFVTYKSVEL
Sbjct: 121 ALPPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVEL 180

Query: 181 ASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVEDIGPGVTAVELV 240
           ASKAID LNN EFKGKKIKCSSSQAKHRLF+GNVPRSWGEEDLRKVV DIGPGVTAVELV
Sbjct: 181 ASKAIDGLNNMEFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELV 240

Query: 241 KDMKNTSNNRGFAFVDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSATSQV 300
           KDMKNTSNNRGFAF+DYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSA SQV
Sbjct: 241 KDMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQV 300

Query: 301 KAVYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALK 360
           KAVYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALK
Sbjct: 301 KAVYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALK 360

Query: 361 NTEKYELDGQALECSLAKPQVDQKSGGSNSQKSGLLPYYPPRVGYGFVGGAYGGAVNAGY 420
           NTEKYELDGQ LECSLAKPQ DQKSGGSNSQKSGLLP YPPRVGYGFVGGAY GAVNAGY
Sbjct: 361 NTEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAY-GAVNAGY 420

Query: 421 GASGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPASQMLTPPPHPRSGGGSGSSG 480
           GASGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQP SQM+TPPPHPRSGGGSGS G
Sbjct: 421 GASGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGGGSGSGG 480

Query: 481 SGGKNGSGSSSR-GRHSHDSGGHGRRYRPY 500
             G    GSSSR GRH+HDS GHGRRYRPY
Sbjct: 481 GSGSKSGGSSSRGGRHTHDS-GHGRRYRPY 507

[Close]

BLAST of Sed0012361 vs. TAIR 10
Match: AT3G52660.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 492.3 bits (1266), Expect = 4.7e-139
Identity = 289/493 (58.62%), Postives = 360/493 (73.02%), Query Frame = 0


Query: 16  EPEKPVDSDERVDLDVDNDPEEEVMVEDVEYEEVEEEEVEEIEVEEEEEEEEEEEEVEEE 75
           E    ++S+ERVDLD DNDP EE++ E+VEYEEVEEEE+EEIE EE EEE E EEE EEE
Sbjct: 10  EAHDSMESEERVDLDGDNDP-EEILEEEVEYEEVEEEEIEEIE-EEIEEEVEVEEEEEEE 69

Query: 76  DVEELEDDGNNDTGINVENEIGNDEDEKKKNTELLALPPHGSEVYIGGIPQDSSEEDLRS 135
           D    E                 +E+EKK++ ELLALPPHGSEVY+GGIP D++E DL+ 
Sbjct: 70  DAVATE-----------------EEEEKKRHVELLALPPHGSEVYLGGIPTDATEGDLKG 129

Query: 136 FCVSIGEITEVRIMRSKESNGNKGFAFVTYKSVELASKAIDELNNTEFKGKKIKCSSSQA 195
           FC SIGE+TEVRIMR K+S   KG+AFVT++S +LA++AID LNNT+F+GK+IKCS++QA
Sbjct: 130 FCGSIGEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTLNNTDFRGKRIKCSTTQA 189

Query: 196 KHRLFIGNVPRSWGEEDLRKVVEDIGPGVTAVELVKDMKNTSNNRGFAFVDYYNHACAEY 255
           KHRLF+GNVPR+W E D++K    IGPGV  VEL K+ +N   NRGFAF++YYNHACAEY
Sbjct: 190 KHRLFLGNVPRNWMESDIKKAANRIGPGVQIVELPKEPQNMGRNRGFAFIEYYNHACAEY 249

Query: 256 SRQKMMNPKFKLDDNAPTVSWADPKN---ADSSATSQVKAVYVKNLPKNVTQEQLKKLFD 315
           S+QKM NP FKLDDNAPTVSWA+ ++    DSSA SQVKA+Y+KNLP+++TQE+LK LF+
Sbjct: 250 SKQKMSNPSFKLDDNAPTVSWAESRSGGGGDSSA-SQVKALYIKNLPRDITQERLKALFE 309

Query: 316 HHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQALECSLAKPQVD 375
           HHGKI KVV+PPAK G+E +R GFVH++ER+S M+ALKNTE+YE+DG  L+C+LAKPQ D
Sbjct: 310 HHGKILKVVIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEIDGHMLDCTLAKPQAD 369

Query: 376 QKSGGS---NSQKSGLLPYYPPRVGYGFVGGAYGGAVNAGYGASGFGQPLIYGRGPTPAG 435
           QK+  +   N QKS L P YPP + YG     +G     G+GAS + QPL++  G    G
Sbjct: 370 QKTNTNTVQNVQKSQLQPNYPPLLSYGMAPSPFGAL--GGFGASAYSQPLMHAGGHAAGG 429

Query: 436 MAMMPMLLPDGRIGYVLQQPA-SQMLTPPPH--PRSGGGSGSSGSGGKNGSGSSSRGRHS 495
           M+MMP++LPDGRIGYVLQQP  + M  PPP   P   GGSGSS S G   S  + RGR  
Sbjct: 430 MSMMPIMLPDGRIGYVLQQPGLAAMPQPPPRHSPPYRGGSGSSSSSGSKRSSDNGRGR-- 471

Query: 496 HDSGGHGRRYRPY 500
                   RY PY
Sbjct: 490 -------SRYNPY 471

[Close]

BLAST of Sed0012361 vs. TAIR 10
Match: AT3G52660.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 492.3 bits (1266), Expect = 4.7e-139
Identity = 289/493 (58.62%), Postives = 360/493 (73.02%), Query Frame = 0


Query: 16  EPEKPVDSDERVDLDVDNDPEEEVMVEDVEYEEVEEEEVEEIEVEEEEEEEEEEEEVEEE 75
           E    ++S+ERVDLD DNDP EE++ E+VEYEEVEEEE+EEIE EE EEE E EEE EEE
Sbjct: 10  EAHDSMESEERVDLDGDNDP-EEILEEEVEYEEVEEEEIEEIE-EEIEEEVEVEEEEEEE 69

Query: 76  DVEELEDDGNNDTGINVENEIGNDEDEKKKNTELLALPPHGSEVYIGGIPQDSSEEDLRS 135
           D    E                 +E+EKK++ ELLALPPHGSEVY+GGIP D++E DL+ 
Sbjct: 70  DAVATE-----------------EEEEKKRHVELLALPPHGSEVYLGGIPTDATEGDLKG 129

Query: 136 FCVSIGEITEVRIMRSKESNGNKGFAFVTYKSVELASKAIDELNNTEFKGKKIKCSSSQA 195
           FC SIGE+TEVRIMR K+S   KG+AFVT++S +LA++AID LNNT+F+GK+IKCS++QA
Sbjct: 130 FCGSIGEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTLNNTDFRGKRIKCSTTQA 189

Query: 196 KHRLFIGNVPRSWGEEDLRKVVEDIGPGVTAVELVKDMKNTSNNRGFAFVDYYNHACAEY 255
           KHRLF+GNVPR+W E D++K    IGPGV  VEL K+ +N   NRGFAF++YYNHACAEY
Sbjct: 190 KHRLFLGNVPRNWMESDIKKAANRIGPGVQIVELPKEPQNMGRNRGFAFIEYYNHACAEY 249

Query: 256 SRQKMMNPKFKLDDNAPTVSWADPKN---ADSSATSQVKAVYVKNLPKNVTQEQLKKLFD 315
           S+QKM NP FKLDDNAPTVSWA+ ++    DSSA SQVKA+Y+KNLP+++TQE+LK LF+
Sbjct: 250 SKQKMSNPSFKLDDNAPTVSWAESRSGGGGDSSA-SQVKALYIKNLPRDITQERLKALFE 309

Query: 316 HHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQALECSLAKPQVD 375
           HHGKI KVV+PPAK G+E +R GFVH++ER+S M+ALKNTE+YE+DG  L+C+LAKPQ D
Sbjct: 310 HHGKILKVVIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEIDGHMLDCTLAKPQAD 369

Query: 376 QKSGGS---NSQKSGLLPYYPPRVGYGFVGGAYGGAVNAGYGASGFGQPLIYGRGPTPAG 435
           QK+  +   N QKS L P YPP + YG     +G     G+GAS + QPL++  G    G
Sbjct: 370 QKTNTNTVQNVQKSQLQPNYPPLLSYGMAPSPFGAL--GGFGASAYSQPLMHAGGHAAGG 429

Query: 436 MAMMPMLLPDGRIGYVLQQPA-SQMLTPPPH--PRSGGGSGSSGSGGKNGSGSSSRGRHS 495
           M+MMP++LPDGRIGYVLQQP  + M  PPP   P   GGSGSS S G   S  + RGR  
Sbjct: 430 MSMMPIMLPDGRIGYVLQQPGLAAMPQPPPRHSPPYRGGSGSSSSSGSKRSSDNGRGR-- 471

Query: 496 HDSGGHGRRYRPY 500
                   RY PY
Sbjct: 490 -------SRYNPY 471

[Close]

BLAST of Sed0012361 vs. TAIR 10
Match: AT4G00830.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 413.7 bits (1062), Expect = 2.1e-115
Identity = 253/501 (50.50%), Postives = 345/501 (68.86%), Query Frame = 0


Query: 22  DSDERVDLDVDNDPEEEVMVEDVEYEEVEEEEVEEIEVEEEEEEEEEEEEVEE------- 81
           D+D+RVD +  +  E E  VE+ + EE EEEE E+ + ++   +  EE EVE+       
Sbjct: 6   DNDDRVDFEEGSYSEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDYGDTKGG 65

Query: 82  --EDV-EELEDDGNNDTGINVENEIGN-----DEDEKKKNTELLALPPHGSEVYIGGIPQ 141
             EDV EE+ +D +N   I   ++        D+++++K + LL+LPPHGSEV+IGG+P+
Sbjct: 66  DMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIGGLPR 125

Query: 142 DSSEEDLRSFCVSIGEITEVRIMRSKESNGNKGFAFVTYKSVELASKAIDELNNTEFKGK 201
           D  EEDLR  C  IGEI EVR+M+ ++S  +KG+AFV +K+ ++A KAI+EL++ EFKGK
Sbjct: 126 DVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFKGK 185

Query: 202 KIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVEDIGPGVTAVELVKDMKNTSNNRGFAFVD 261
            I+CS S+ K+RLFIGN+P++W E++ RKV+ED+GPGV  +EL+KD  NT+ NRGFAFV 
Sbjct: 186 TIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNRGFAFVL 245

Query: 262 YYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNA--DSSATSQVKAVYVKNLPKNVTQ 321
           YYN+ACA+YSRQKM++  FKL+ NAPTV+WADPK++   S+A +QVKA+YVKN+P+N + 
Sbjct: 246 YYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPENTST 305

Query: 322 EQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQALEC 381
           EQLK+LF  HG++TK+V PP K G  K   GFVH++ERSSA+KA+K+TE+YE++GQ LE 
Sbjct: 306 EQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVNGQPLEV 365

Query: 382 SLAKPQVDQKSGGSNSQKSGL---LPYYPPRVGYGFVGGAYGGAVNAGYGASG-FGQPLI 441
            LAKPQ ++K   S+          P+  P  G GF    Y GA+ AG G +G F QP+I
Sbjct: 366 VLAKPQAERKHDPSSYSYGAAPTPAPFVHPTFG-GFAAAPY-GAMGAGLGIAGSFSQPMI 425

Query: 442 YGRGPTPAGMAMMPMLLPDGRIGYVLQQPASQMLTPPPH--PRSGGGSGSSGSGGKNGSG 500
           YGRG  P GM M+PMLLPDGR+GYVLQQP   M   PP    R+   +GSSG  G++ S 
Sbjct: 426 YGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSGRDNS- 485

[Close]

BLAST of Sed0012361 vs. TAIR 10
Match: AT4G00830.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 413.7 bits (1062), Expect = 2.1e-115
Identity = 253/501 (50.50%), Postives = 345/501 (68.86%), Query Frame = 0


Query: 22  DSDERVDLDVDNDPEEEVMVEDVEYEEVEEEEVEEIEVEEEEEEEEEEEEVEE------- 81
           D+D+RVD +  +  E E  VE+ + EE EEEE E+ + ++   +  EE EVE+       
Sbjct: 6   DNDDRVDFEEGSYSEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDYGDTKGG 65

Query: 82  --EDV-EELEDDGNNDTGINVENEIGN-----DEDEKKKNTELLALPPHGSEVYIGGIPQ 141
             EDV EE+ +D +N   I   ++        D+++++K + LL+LPPHGSEV+IGG+P+
Sbjct: 66  DMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIGGLPR 125

Query: 142 DSSEEDLRSFCVSIGEITEVRIMRSKESNGNKGFAFVTYKSVELASKAIDELNNTEFKGK 201
           D  EEDLR  C  IGEI EVR+M+ ++S  +KG+AFV +K+ ++A KAI+EL++ EFKGK
Sbjct: 126 DVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFKGK 185

Query: 202 KIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVEDIGPGVTAVELVKDMKNTSNNRGFAFVD 261
            I+CS S+ K+RLFIGN+P++W E++ RKV+ED+GPGV  +EL+KD  NT+ NRGFAFV 
Sbjct: 186 TIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNRGFAFVL 245

Query: 262 YYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNA--DSSATSQVKAVYVKNLPKNVTQ 321
           YYN+ACA+YSRQKM++  FKL+ NAPTV+WADPK++   S+A +QVKA+YVKN+P+N + 
Sbjct: 246 YYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPENTST 305

Query: 322 EQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQALEC 381
           EQLK+LF  HG++TK+V PP K G  K   GFVH++ERSSA+KA+K+TE+YE++GQ LE 
Sbjct: 306 EQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVNGQPLEV 365

Query: 382 SLAKPQVDQKSGGSNSQKSGL---LPYYPPRVGYGFVGGAYGGAVNAGYGASG-FGQPLI 441
            LAKPQ ++K   S+          P+  P  G GF    Y GA+ AG G +G F QP+I
Sbjct: 366 VLAKPQAERKHDPSSYSYGAAPTPAPFVHPTFG-GFAAAPY-GAMGAGLGIAGSFSQPMI 425

Query: 442 YGRGPTPAGMAMMPMLLPDGRIGYVLQQPASQMLTPPPH--PRSGGGSGSSGSGGKNGSG 500
           YGRG  P GM M+PMLLPDGR+GYVLQQP   M   PP    R+   +GSSG  G++ S 
Sbjct: 426 YGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSGRDNS- 485

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BLAST of Sed0012361 vs. TAIR 10
Match: AT4G00830.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 399.8 bits (1026), Expect = 3.2e-111
Identity = 246/484 (50.83%), Postives = 331/484 (68.39%), Query Frame = 0


Query: 47  EEVEEEEVEEIEVEEEEEEEE--------EEEEVEE---------EDV-EELEDDGNNDT 106
           +EVEEE+VEE E EEEE++++        EE EVE+         EDV EE+ +D +N  
Sbjct: 3   DEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDYGDTKGGDMEDVQEEIAEDDDNHI 62

Query: 107 GINVENEIGN-----DEDEKKKNTELLALPPHGSEVYIGGIPQDSSEEDLRSFCVSIGEI 166
            I   ++        D+++++K + LL+LPPHGSEV+IGG+P+D  EEDLR  C  IGEI
Sbjct: 63  DIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIGGLPRDVGEEDLRDLCEEIGEI 122

Query: 167 TEVRIMRSKESNGNKGFAFVTYKSVELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGN 226
            EVR+M+ ++S  +KG+AFV +K+ ++A KAI+EL++ EFKGK I+CS S+ K+RLFIGN
Sbjct: 123 FEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFKGKTIRCSLSETKNRLFIGN 182

Query: 227 VPRSWGEEDLRKVVEDIGPGVTAVELVKDMKNTSNNRGFAFVDYYNHACAEYSRQKMMNP 286
           +P++W E++ RKV+ED+GPG        D  NT+ NRGFAFV YYN+ACA+YSRQKM++ 
Sbjct: 183 IPKNWTEDEFRKVIEDVGPG--------DPTNTTRNRGFAFVLYYNNACADYSRQKMIDS 242

Query: 287 KFKLDDNAPTVSWADPKNA--DSSATSQVKAVYVKNLPKNVTQEQLKKLFDHHGKITKVV 346
            FKL+ NAPTV+WADPK++   S+A +QVKA+YVKN+P+N + EQLK+LF  HG++TK+V
Sbjct: 243 NFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPENTSTEQLKELFQRHGEVTKIV 302

Query: 347 LPPAKSGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQALECSLAKPQVDQKSGGSNSQ 406
            PP K G  K   GFVH++ERSSA+KA+K+TE+YE++GQ LE  LAKPQ ++K   S+  
Sbjct: 303 TPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVNGQPLEVVLAKPQAERKHDPSSYS 362

Query: 407 KSGL---LPYYPPRVGYGFVGGAYGGAVNAGYGASG-FGQPLIYGRGPTPAGMAMMPMLL 466
                   P+  P  G GF    Y GA+ AG G +G F QP+IYGRG  P GM M+PMLL
Sbjct: 363 YGAAPTPAPFVHPTFG-GFAAAPY-GAMGAGLGIAGSFSQPMIYGRGAMPTGMQMVPMLL 422

Query: 467 PDGRIGYVLQQPASQMLTPPPH--PRSGGGSGSSGSGGKNGSGSSSRGRHSHDSGGHGRR 500
           PDGR+GYVLQQP   M   PP    R+   +GSSG  G++ S       H HD    GRR
Sbjct: 423 PDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSGRDNS-------HEHDGNRGGRR 467

The following BLAST results are available for this feature:

BLAST of Sed0012361 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902706.1	4.1e-238	89.88	heterogeneous nuclear ribonucleoprotein Q [Benincasa hispida] >XP_038902707.1 he...	[more]
XP_022153053.1	6.0e-237	89.47	heterogeneous nuclear ribonucleoprotein Q [Momordica charantia] >XP_022153054.1 ...	[more]
XP_008449579.1	1.3e-236	88.80	PREDICTED: nucleolin [Cucumis melo] >XP_008449580.1 PREDICTED: nucleolin [Cucumi...	[more]
KAG6605979.1	5.0e-236	90.35	Heterogeneous nuclear ribonucleoprotein Q, partial [Cucurbita argyrosperma subsp...	[more]
XP_023533658.1	1.9e-235	90.22	heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita pepo subsp. pepo] >XP_...	[more]

BLAST of Sed0012361 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ASP6	3.0e-114	50.50	Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana OX=3702 GN=LIF...	[more]
Q7TP47	1.7e-37	31.95	Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncr...	[more]
O43390	2.0e-33	29.27	Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1...	[more]
O60506	7.5e-33	30.70	Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens OX=9606 GN=SYNCRIP PE=...	[more]
Q7TMK9	9.8e-33	30.70	Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE...	[more]

BLAST of Sed0012361 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DHV9	2.9e-237	89.47	heterogeneous nuclear ribonucleoprotein Q OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A1S3BMC2	6.4e-237	88.80	nucleolin OS=Cucumis melo OX=3656 GN=LOC103491420 PE=4 SV=1	[more]
A0A0A0KI54	3.5e-235	88.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425690 PE=4 SV=1	[more]
A0A6J1H0I9	4.6e-235	90.02	heterogeneous nuclear ribonucleoprotein Q-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1K6U6	6.0e-235	89.22	heterogeneous nuclear ribonucleoprotein Q-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of Sed0012361 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52660.1	4.7e-139	58.62	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G52660.2	4.7e-139	58.62	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.1	2.1e-115	50.50	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.2	2.1e-115	50.50	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.3	3.2e-111	50.83	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 46..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..104
None	No IPR available	PANTHER	PTHR10352	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G	coord: 1..447
None	No IPR available	PANTHER	PTHR10352:SF41	RNA RECOGNITION MOTIF	coord: 1..447
None	No IPR available	CDD	cd00590	RRM_SF	coord: 119..191 e-value: 3.56012E-22 score: 88.1309
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 198..275 e-value: 5.8E-11 score: 52.4 coord: 118..191 e-value: 1.2E-23 score: 94.5 coord: 292..365 e-value: 2.8E-15 score: 66.8
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 293..362 e-value: 2.4E-15 score: 56.1 coord: 199..262 e-value: 1.8E-10 score: 40.5 coord: 119..189 e-value: 1.2E-18 score: 66.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 291..369 score: 15.306254
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 197..279 score: 11.980452
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 117..195 score: 18.035118
IPR003954	RNA recognition motif domain, eukaryote	SMART	SM00361	rrm2_1	coord: 118..191 e-value: 3.8E-5 score: 33.1 coord: 292..365 e-value: 3.0 score: 9.3
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 40..197 e-value: 8.6E-30 score: 105.7
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 279..414 e-value: 1.3E-21 score: 79.1
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 198..278 e-value: 1.1E-21 score: 78.6
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 114..283
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 284..396

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0012361.1	Sed0012361.1	mRNA
Sed0012361.2	Sed0012361.2	mRNA
Sed0012361.3	Sed0012361.3	mRNA
Sed0012361.4	Sed0012361.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding