Sed0011674 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAGTTAAGCATTGAGGTCCGTTAATGGCGGTTTCTTCGTTCCCGGTTCTTTCTTCACTGAGCGCCACTGCTAACATCTCTTCGGATGTCAGCTTGTTTTCTCCGAATCTTCCTCTTCTCAATTTGTGTTACAGATCGAGCACTCATCGTTCATCTTCTGTAATCGTTTGCTCCAACAGTGAGTTCTGTTTTCTTGTCTTGGAGAAATGGAAAGACGATTTTGCTGTAACCTTTTCTCTTATGCTGTTATTGAATTTCCAATTGTGTATTGGTTTCAGAGTCTGGGAATGATACGGCGACGGAGCGTAGGAAAAAGTTGTTGGAGCAGTATGGACTTAATCCTGATGAGTTTTTGTCTGAACCTTCTACTCATGTTGCTCCTCTCTCCCTCTCTGATTGTTGTTTTCTTTCATTTCTTTCCAAACTTGAATAATTTCTAGATCATTGACTGAATTTGTACTGTTTTATATCTGTTTCAATCGTGCAATTGCATTCTATTTTGGCAGTGTTAGGGTTTCTTGTATGCTAATGCTTAATTTTCTTCATTCCAGTTGATTTTATAATCTCTCTGATTGTTGAATCTTCTTTATAGCGAAGAAAAGAAGTGCGAAAATCGGGAAAAGGCAGGCAGATTTCAGTTGAGGATCCTAAACCTCAACGGCAGACCCATAAGTTGCTTCAGGTACGAGTTTTGTTCCTGTTTTTTTTCATTTTGTTTAGTGATTTGTCCTGGGAGAAAGATAGATAGCCTCAAGTTGTGATAGCAGGACATTGATATCAAATGTTCAATTCATTCGCTAGCTTAACTGGGTACTACAAACAATATTCATAGAATATAAACCTATTTATTCCAATCTTCATTTATAGAATATAGGTTTGTTGAACAAGTTTAAATAACAGAATAACCACATTGCAACAAAGACTAAACAACCCCTAACAATATAAGTACCTACCTAATACATAGTGTTAGTCCTACTATCCATTCTATATCTTACAAAATAGAGAGGGCATCCTTCAAAGGGATATCTCTCTCCGCCATGGAGATTAATCCTTCAAAATTTAGAAATGTAGTGAAAGAAGATAGAATTGTTTGTTTAATTTGATATTGGAGGTCTTTTGGTACTGGAACTTTCCTTTCAAGAATGAACAAATGTTGTATTTAGATGACAGATATTCCCTCTTAAATGTCAAATTTCACAAATTGAAAACTATAGTACTCATTTATTCCTGTAAGTTGATTGAATTATTTATTCCAATCTCATCCTTCACCATGTTTATAATTTTCAATCTCAGGTGCTTGGAGGAAGTGCTCGGAGAATGAAGCTACTCTCACCAAAGGGCTTGGATGTACGGCCAATGATGGAAGTTGTGAAAGGTGCAGCTTTTGATATTATGCAGGTTGGGGTTGTATGTTAAATATTAGTTTTTTTCCACGTTACTAGATCATTCAGCCAACTTATCAAATGATTTAGAGTTTGTAGATTTCTAGTTCAAGAGCTCATTCAATAACAAGTTATTTTATTATTCATACTTTTCTTGGGTAGGTTGCTGGTAGCCATCCTGTCACAAAAAAAATTAATGTAATTTGAAAATGCAGGCTGCTGGCGGCTGTCCAGCATCATTAAGGCCTGGTCGTTGGTTAGACTTGTATAGTGGTACTGGATCGGTTGGTATTGAAGCTATGAGCCGTGGATGTTCTGAGGTACCACATTAATTGGGAATTTAGTTTGGGATAACATTGTCCATAATTTTTAAAAATTAAGGTTAAAGCATCTTTCGAACTATATTTAGATTGAGATTAGGTTGATATCCAAAATTATCAATGTCATGATAATCATTCTCTATATCTCTCTCTTTTTTTTTTCTTCTAAATGTAGTTTCTGCTCCTTCAACTTCCAGGTTCATTTTGTGGAGATGGATCCATGGGTTGTTTCTGACGTTTTAAGGCCAAATCTGGAATCTACTGGATTTTTAGATGATTCAATCATTCACACAATTCGAGTTGAAAATTTTATAGAACGAGCTGAGCATCTTATTGGTTCACATCTAAACTTCAATTTTCTCCTTCGTTTGTTTTATCCTAGGAAATATGGACACAAATATGGACATGAGGGCACGTTGTTTCTGGCAAACTAAGACACTTGCAGAAACAAAGATGTATTTTTTTCTTTTGAAAAGAAAGATACATCTATTTAAATATATATTTGAATAATTCTATGCTTCTTATGTTTCTCATGTTAAAGTTATTTTCATTCTTGATATATGTAATACTTAATATATTAAAAGGGAGATGTCGGGAATTATGGAGAATTGTATCTGAGAATATAATTGTTACTCTTGTCGAACTTTGAAAGGGATATAGATTTTCTTGAAATAGTATGTATATCAGACGATTCAGACCATACCTTTTTAATCTTCTTTCAGTTTTTTATACAGATTAGATGAATTATGGAGTAGGACAATAACCTAATATCGTAGCTGATACAACACCATTACGAAAATAAAAACCCCATTGAGGTTTTCGATAGTCAATCTGGCATAAAAGCATTGAATAGATTCTGCATTGTCATTTGAGTTTGATGTGTAACACTCATGACTCAAATAAAGAATGCACTACTGCAGAGGATACTATTGACGTAATGCCCTAAAAAATGTGCTCCACCCAAATTTCTAAGAAATTTATCTGTAGTTGTGTCATTAAACTTGCATGACTTAGTGGTAAAATTAAAGATGAAACCAATATTCTCCTTTTTTTTTTATTCGAAGAAATTGTAGTGGAGTAATTTCATATAGTATAGTTCAATTGAATGTATAAGCTTCTATTATTTATGGTTTTAAGACTACCTAATTATTAAGTCAAGAATATTTTTTGTCTAGGTAATGATAGACCATTTGATTACATTAGTGTTACCCCACCGTATACACAAGTTGATTATGGGGTACTCATGGGGCAACTTGCAAAGTCACCCTTAGTTGGAGATGATACCTTCATTGTAAGTTTTAATTTCCTTATTCCTGATTAAGATAGTTCTTTACATGTGGTTTACCTTTGTTTCTCACTTTGACCTTTGTGATCTAGGTGGTTGAATATCCATTAAGGACTGATATGCTAGATTCGTGTGGATGCCTTATTAAGGTAATTTAATCATGCTTACAATTTACATTCTTAACGCTATGCATGAATAAAATTATTAAAAAGGAATTTTGTATTTCACCTGAAATTTGTTCACTGAAAAGTGAAATATTTATATGCAATATCTCTAGCCTGATGGAATTTAGTGAGAAACCATGGGCTTGGATGGTGGGCGATTATATTTTTTCATAATTGGGTCAAGTTAACTATAGCCTTTACTGACACCAACACCTGGAGGAGTAAAGGGTCAAAGGGCCTTAAGATACTGAAAGGTTATGTGTCAAATCCATGATAGCCACCTACTTAGAAATTAATTTCTTAAGAACTTTCTTGACATCCAAATGTTGTAAGATCAGGCGGTATGACCCATAAGAATAATCGAGATGCACATTAGCTGGCCTGGACCCTCACAAATATTTAAAGAAAAAAGTAGAGATCAAAGGTCTAATATCTTACAAATTTCTGCTGTTGCTTTCTTTGTATTTTTTGAAGTCTGGCTATGGGGATTTGGTGAGAATTATTCTGGCTCTTTCTCTTCATGTCTTTAGTATTTCCCTATTGGATAACAAATATGTATCTAACTGCAGATTACTGACCGGCGATTTGGTCGGACACACTTGGCAATTTATGGACCCAAGTGGGCTGAGAAGGAAAAAAATAAAAAAGAAAAAGTTCAAATTACTTAATGAAGTTTCTGTAACTGTGGTGGCATTGTTCGGCAACAGTTGCTACAAGCCTAAACTCAAATGGTCGGAAGGCAACTTAAAGAGCTGCACGTTTTTCATCAAAGAACTAAGAGCTGCATGATTTAAAGCATTTCCATTGTCCAATTCTATTGGTAACTAGGAATTGTAGAATCCAGATGATGATACTATTTCTTTTTTCAAATTCTATTGGCATCTGCAAGTACAGGGTTCTCAACTATTGCAGGTCATGGCTGTGTATGTAATTTACAGCCAAACCTGCTTATTGTCTAGTTCTAGAATTTATACCCCAGCTTCTTTTTTCCTCTTTTTTTGGGGTCTAAATTGATGGGTACTATCCACTCTAGTATTTTCGCTCAGTGAACGGAAGTATAACCTGTAGAAGACTGTATTGAAACTCAAATATGTTTTATGGATCTTTTTGGTTGATTCCAGCATTAAAGTGCCAGTATGCATGTAGTATTTAGAATCGTGCATTTTAT GAAGTTAAGCATTGAGGTCCGTTAATGGCGGTTTCTTCGTTCCCGGTTCTTTCTTCACTGAGCGCCACTGCTAACATCTCTTCGGATGTCAGCTTGTTTTCTCCGAATCTTCCTCTTCTCAATTTGTGTTACAGATCGAGCACTCATCGTTCATCTTCTGTAATCGTTTGCTCCAACAAGTCTGGGAATGATACGGCGACGGAGCGTAGGAAAAAGTTGTTGGAGCAGTATGGACTTAATCCTGATGAGTTTTTGTCTGAACCTTCTACTCATCGAAGAAAAGAAGTGCGAAAATCGGGAAAAGGCAGGCAGATTTCAGTTGAGGATCCTAAACCTCAACGGCAGACCCATAAGTTGCTTCAGGTGCTTGGAGGAAGTGCTCGGAGAATGAAGCTACTCTCACCAAAGGGCTTGGATGTACGGCCAATGATGGAAGTTGTGAAAGGTGCAGCTTTTGATATTATGCAGGCTGCTGGCGGCTGTCCAGCATCATTAAGGCCTGGTCGTTGGTTAGACTTGTATAGTGGTACTGGATCGGTTGGTATTGAAGCTATGAGCCGTGGATGTTCTGAGGTTCATTTTGTGGAGATGGATCCATGGGTTGTTTCTGACGTTTTAAGGCCAAATCTGGAATCTACTGGATTTTTAGATGATTCAATCATTCACACAATTCGAGTTGAAAATTTTATAGAACGAGCTGAGCATCTTATTGGTAATGATAGACCATTTGATTACATTAGTGTTACCCCACCGTATACACAAGTTGATTATGGGGTACTCATGGGGCAACTTGCAAAGTCACCCTTAGTTGGAGATGATACCTTCATTGTGGTTGAATATCCATTAAGGACTGATATGCTAGATTCGTGTGGATGCCTTATTAAGATTACTGACCGGCGATTTGGTCGGACACACTTGGCAATTTATGGACCCAAGTGGGCTGAGAAGGAAAAAAATAAAAAAGAAAAAGTTCAAATTACTTAATGAAGTTTCTGTAACTGTGGTGGCATTGTTCGGCAACAGTTGCTACAAGCCTAAACTCAAATGGTCGGAAGGCAACTTAAAGAGCTGCACGTTTTTCATCAAAGAACTAAGAGCTGCATGATTTAAAGCATTTCCATTGTCCAATTCTATTGGTAACTAGGAATTGTAGAATCCAGATGATGATACTATTTCTTTTTTCAAATTCTATTGGCATCTGCAAGTACAGGGTTCTCAACTATTGCAGGTCATGGCTGTGTATGTAATTTACAGCCAAACCTGCTTATTGTCTAGTTCTAGAATTTATACCCCAGCTTCTTTTTTCCTCTTTTTTTGGGGTCTAAATTGATGGGTACTATCCACTCTAGTATTTTCGCTCAGTGAACGGAAGTATAACCTGTAGAAGACTGTATTGAAACTCAAATATGTTTTATGGATCTTTTTGGTTGATTCCAGCATTAAAGTGCCAGTATGCATGTAGTATTTAGAATCGTGCATTTTAT ATGGCGGTTTCTTCGTTCCCGGTTCTTTCTTCACTGAGCGCCACTGCTAACATCTCTTCGGATGTCAGCTTGTTTTCTCCGAATCTTCCTCTTCTCAATTTGTGTTACAGATCGAGCACTCATCGTTCATCTTCTGTAATCGTTTGCTCCAACAAGTCTGGGAATGATACGGCGACGGAGCGTAGGAAAAAGTTGTTGGAGCAGTATGGACTTAATCCTGATGAGTTTTTGTCTGAACCTTCTACTCATCGAAGAAAAGAAGTGCGAAAATCGGGAAAAGGCAGGCAGATTTCAGTTGAGGATCCTAAACCTCAACGGCAGACCCATAAGTTGCTTCAGGTGCTTGGAGGAAGTGCTCGGAGAATGAAGCTACTCTCACCAAAGGGCTTGGATGTACGGCCAATGATGGAAGTTGTGAAAGGTGCAGCTTTTGATATTATGCAGGCTGCTGGCGGCTGTCCAGCATCATTAAGGCCTGGTCGTTGGTTAGACTTGTATAGTGGTACTGGATCGGTTGGTATTGAAGCTATGAGCCGTGGATGTTCTGAGGTTCATTTTGTGGAGATGGATCCATGGGTTGTTTCTGACGTTTTAAGGCCAAATCTGGAATCTACTGGATTTTTAGATGATTCAATCATTCACACAATTCGAGTTGAAAATTTTATAGAACGAGCTGAGCATCTTATTGGTAATGATAGACCATTTGATTACATTAGTGTTACCCCACCGTATACACAAGTTGATTATGGGGTACTCATGGGGCAACTTGCAAAGTCACCCTTAGTTGGAGATGATACCTTCATTGTGGTTGAATATCCATTAAGGACTGATATGCTAGATTCGTGTGGATGCCTTATTAAGATTACTGACCGGCGATTTGGTCGGACACACTTGGCAATTTATGGACCCAAGTGGGCTGAGAAGGAAAAAAATAAAAAAGAAAAAGTTCAAATTACTTAA MAVSSFPVLSSLSATANISSDVSLFSPNLPLLNLCYRSSTHRSSSVIVCSNKSGNDTATERRKKLLEQYGLNPDEFLSEPSTHRRKEVRKSGKGRQISVEDPKPQRQTHKLLQVLGGSARRMKLLSPKGLDVRPMMEVVKGAAFDIMQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRGCSEVHFVEMDPWVVSDVLRPNLESTGFLDDSIIHTIRVENFIERAEHLIGNDRPFDYISVTPPYTQVDYGVLMGQLAKSPLVGDDTFIVVEYPLRTDMLDSCGCLIKITDRRFGRTHLAIYGPKWAEKEKNKKEKVQIT Homology
BLAST of Sed0011674 vs. NCBI nr
Match: XP_038890433.1 (putative rRNA methyltransferase YlbH [Benincasa hispida]) HSP 1 Score: 559.7 bits (1441), Expect = 1.6e-155 Identity = 273/314 (86.94%), Postives = 299/314 (95.22%), Query Frame = 0
BLAST of Sed0011674 vs. NCBI nr
Match: XP_022133703.1 (uncharacterized protein LOC111006220 [Momordica charantia]) HSP 1 Score: 555.1 bits (1429), Expect = 4.0e-154 Identity = 275/316 (87.03%), Postives = 297/316 (93.99%), Query Frame = 0
BLAST of Sed0011674 vs. NCBI nr
Match: XP_008458705.1 (PREDICTED: putative rRNA methyltransferase YlbH [Cucumis melo] >KAA0037420.1 putative rRNA methyltransferase YlbH [Cucumis melo var. makuwa] >TYK00211.1 putative rRNA methyltransferase YlbH [Cucumis melo var. makuwa]) HSP 1 Score: 543.5 bits (1399), Expect = 1.2e-150 Identity = 270/313 (86.26%), Postives = 294/313 (93.93%), Query Frame = 0
BLAST of Sed0011674 vs. NCBI nr
Match: XP_004148680.1 (uncharacterized protein LOC101209883 [Cucumis sativus] >XP_031741881.1 uncharacterized protein LOC101209883 [Cucumis sativus] >KGN52426.1 hypothetical protein Csa_007850 [Cucumis sativus]) HSP 1 Score: 540.4 bits (1391), Expect = 1.0e-149 Identity = 269/314 (85.67%), Postives = 292/314 (92.99%), Query Frame = 0
BLAST of Sed0011674 vs. NCBI nr
Match: XP_022993553.1 (uncharacterized protein LOC111489523 isoform X1 [Cucurbita maxima] >XP_022993554.1 uncharacterized protein LOC111489523 isoform X1 [Cucurbita maxima]) HSP 1 Score: 516.2 bits (1328), Expect = 2.1e-142 Identity = 263/316 (83.23%), Postives = 285/316 (90.19%), Query Frame = 0
BLAST of Sed0011674 vs. ExPASy Swiss-Prot
Match: O34331 (Putative rRNA methyltransferase YlbH OS=Bacillus subtilis (strain 168) OX=224308 GN=ylbH PE=3 SV=2) HSP 1 Score: 78.6 bits (192), Expect = 1.5e-13 Identity = 53/191 (27.75%), Postives = 93/191 (48.69%), Query Frame = 0
BLAST of Sed0011674 vs. ExPASy Swiss-Prot
Match: P0ADY0 (Ribosomal RNA small subunit methyltransferase D OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=rsmD PE=3 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 9.4e-05 Identity = 39/169 (23.08%), Postives = 73/169 (43.20%), Query Frame = 0
BLAST of Sed0011674 vs. ExPASy Swiss-Prot
Match: P0ADX9 (Ribosomal RNA small subunit methyltransferase D OS=Escherichia coli (strain K12) OX=83333 GN=rsmD PE=1 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 9.4e-05 Identity = 39/169 (23.08%), Postives = 73/169 (43.20%), Query Frame = 0
BLAST of Sed0011674 vs. ExPASy Swiss-Prot
Match: Q9ZD05 (Uncharacterized methylase RP545 OS=Rickettsia prowazekii (strain Madrid E) OX=272947 GN=RP545 PE=4 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 4.7e-04 Identity = 47/229 (20.52%), Postives = 96/229 (41.92%), Query Frame = 0
BLAST of Sed0011674 vs. ExPASy TrEMBL
Match: A0A6J1BZW0 (uncharacterized protein LOC111006220 OS=Momordica charantia OX=3673 GN=LOC111006220 PE=4 SV=1) HSP 1 Score: 555.1 bits (1429), Expect = 2.0e-154 Identity = 275/316 (87.03%), Postives = 297/316 (93.99%), Query Frame = 0
BLAST of Sed0011674 vs. ExPASy TrEMBL
Match: A0A5D3BK68 (Putative rRNA methyltransferase YlbH OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1582G00020 PE=4 SV=1) HSP 1 Score: 543.5 bits (1399), Expect = 5.9e-151 Identity = 270/313 (86.26%), Postives = 294/313 (93.93%), Query Frame = 0
BLAST of Sed0011674 vs. ExPASy TrEMBL
Match: A0A1S3C8K7 (putative rRNA methyltransferase YlbH OS=Cucumis melo OX=3656 GN=LOC103498032 PE=4 SV=1) HSP 1 Score: 543.5 bits (1399), Expect = 5.9e-151 Identity = 270/313 (86.26%), Postives = 294/313 (93.93%), Query Frame = 0
BLAST of Sed0011674 vs. ExPASy TrEMBL
Match: A0A0A0KX89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G633240 PE=4 SV=1) HSP 1 Score: 540.4 bits (1391), Expect = 5.0e-150 Identity = 269/314 (85.67%), Postives = 292/314 (92.99%), Query Frame = 0
BLAST of Sed0011674 vs. ExPASy TrEMBL
Match: A0A6J1K2L1 (uncharacterized protein LOC111489523 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489523 PE=4 SV=1) HSP 1 Score: 516.2 bits (1328), Expect = 1.0e-142 Identity = 263/316 (83.23%), Postives = 285/316 (90.19%), Query Frame = 0
BLAST of Sed0011674 vs. TAIR 10
Match: AT3G28460.1 (methyltransferases ) HSP 1 Score: 371.3 bits (952), Expect = 7.7e-103 Identity = 195/311 (62.70%), Postives = 238/311 (76.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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