Sed0011315 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACCGTCGTCTTCAACACGATGTGGTCTTCTGTTGTTACCAACTGCGGCACCAAAATTCTGCGCTACCGGTCTCTCTTGCTTCCACGTGTCCTCATCGCTCCGATTTCTCCTTCTCTATCTTCCATGGATAGAAGCAATTCCTCCTCCTTTTCTTCTTCTGTACATTCCAGCAAAAGGTTGATTGATTTCGTTGCGTTTTTTTGTATTTGTGAATTTTTGTAGAAATTCTTGTTGTGGTTATTGAATCTGTTCTTTGTTTTGATGTTTTCGATCAGTGGTGGAAGAGGAAGAGGCTTGGATATGAGGAATGATCGAGAAAGATCGAGAGGACGCGGCGGAGGAAGCGGCGGCGGCGACGGTGGCGCTGGTAAAGACAGAATCGACGCTCTTGGTAGACTATTGTAAGCATATTTCTTATATTGAGATCTTGTTTAGGTGTTAATTTTATTGGGAGTTGACGAAGTGGATCTACAATTAAGAATTAACGATTCATGAAGCTGAAGCTTAATTTCCTATAATTTATTTATTTGGCTGTAATCGTTTGCGGGACAGGTAAAAATCGATGTTCAAATGGAAACCTTAATTCATATGTACTGTACTTAATCAGTTAATGCACATGTAAGCTTGAGAAAATTTCAAGGAGATCGGTAGGATATGGTCTCATCAACAGTCAAATTAGGGCCTTGTAAATTAGAAGTTGCAAATTTAATTCGTGGTAGTGGTCAGTCTAGGAATTAATTTCCTACGAAATACTTTGATAGGATCAATTGTTGTCCATGAAAATAGTCGAGATGTGCGAAACTTGGTTCGGACAATTTATGTGTATAAACAAAGTACGGTACAGTCTCGTGGTCTTAATCTTATATTCCTTTTTAGTAGTGACATCACTTTATTAATTGGGGTGGTTTTATCAACAATTTACTCCAAGGATTGCACAACGATTGAAGACTTGGACTTTGAGGGTATACTCCCCTCAAGGTCCCAGGTTCGAGACTCAGCTGTGACATTATTCCTTCCATATCTCCCGGTACCTGGCCTAGGGACGGGCGTGATTACTCTTGTTTCAAAAAAAAATTGGGGTGGTTTTATTAACAATTTAGAGCGATTGTTGTGAGCGTTCAAATATCTTACTTTTTATGATTAGCTGGTGAAGAATGAATAAGCCCAAGTAGGCAAGTTATACATAATGCATATAAGATTTGTTTCTTGCAGCAGTGTTACGTCGTTTAGTTTTTGTTGATTGATACTTTCCCTTTGTAATGAATTTCAGGACACGTATCTTGCGCCATATGGCTTCGGAATTGAACTTGAATATGAGGAATGATGGATATGTCAAAGTTCAGGATTTGCTAAAGCTGAATTTGAAAACATTTGCCAATATCCCGCTTAAATCGCACACAATCGATGACATAAGGGAGGTTGGTTGAATAATTTTCGTCTTTACTTGCTTTAGCATCATTTTAATTTGCAGAATCAAACTGGTATTTAACTTGAATGCAGTTAAAGGTTTAGTTCATCTGTTAATCTTGATCCCCTAGCTCTAGTCTAGAGTGTTGTTTATCTGCTAAGCTCAATTAGAACCTTACCCACACATCTGGTTTTGATCCATTCATCCTTGCTTTTTTTCTCTATTAGTTCCAATAGTGTATTTCTCCTTCCCCCATCAACTTGTAAATTTGCAGTTCAGTTTTGTTCCTCTAAGCATCTATCATTGATGAATAGTTTTTTTCTTTCTTTCTTTTCAATGCCAGGCTGTGAGGAAGGATAATAAGCAGCGTTTTGGCCTCCTCGAAGAGGATGGAGAGCTCTTAATTCGAGCAAACCAAGGCCATACAGTCACGGTTATTTTCTTTCTTTATGAACCATTGAATATGTTACTGTCAGCCTTCTTTTTTTATATCCGTGAGTGTCCGGGCCAGCTTACGCGCAACACGATTATTCCCACAGGACATTTTGTCTAACCCTACAACATTTGGATGTCCGTTAAGAAGCCTTTTAGGAAGTTTTGGACCGTCCATCAAACTTATTGATTGGAAAGGTGTTGGTTGCTTTACCTTAGCTTTATATGCATTTAGAGCTTTTCGACATTGGCTCATCTTTGTTATGAAAAATCCATGTCCCCTTTTTTTTTTATTGTTCGTCTATTTTGTGACAATCAGCCTTATAAGATTGGTAAATTGTTTGCTATACGATATTGTTTATATAAGGCTTCCTCACCTGTTTACATAATCTCTTCTAGATAAAGTCAATCACCCTTAAGATTGTGATGATCAATCAACGGTGATCAGTGGTTCAGAATTTAGCCCAAAAATTTGTAACACTTTCATTTGATCAGTGAAAATATTTTCATTTCCTATAAAAAAAAAAAAAAAAAACTATTTTGTCTACATTATCATAAATGGAAAACACATCCTTTGCAGGTGGTTGAAACTGAAAGCTTATTAAAACCAATAATTTCGGCCGAGGAGTTTCCAGGTCGACTGTTAATTTTATTTAATTCTTTCCCATAATATTCTTTCCTCCTTGATGTGTATGATATGAACATTGATGCGTTCTGAATTTTTTTTTTGTTATTCAATTTATCAACCACATTTTGTCCCTCTTCATTATAGTTTGTGTACACGGTACTTACAAGAAGAATTTGGAATCAATTCTGGAATCTGGTTTGAAACGCATGAAAAGATTGCATGTACATTTCTCTTGTGGTTTGCCAACGGATGGGGAGGTTATTAGTGGTAAGTTAAGAAAGTCCAATTGTTACATTTTTCTGAAGAGTTTATCTAATAAAATCACGATGTTACTTTGATTGGAAATTAGTTACTTCTGCAATTGAAATCTTCATCTATTTTCTCTAAATGAAATACCTTTGTTCATGTATTGTTATTGACCCAAAAAATTTCAGGAGTAAAAGGAAAAATAAACCATAATTAGATTTTCTCCCCCATTTTCTATCCATGACTATATAAAAGATCAAGTGTCCCATCAAAGTGCGCGTAAATTAGCATGTAACGTAAAAATGGTAAAGATAAAAGACGCTGACATGAAATTAAGGCCATTTGTTTGTTTTACTTGTGCTAAGATGACTTTGAGAATTAAGAAGTGATAGGTTTAATCCATGGTGACCACCTATCCAGGAATTAATTTCCTATGAGTTTTCTTGACATCCAAATGTTGTAGAGTCAGGTGGTATGTCTTGTAAGAATAGTTTTACTTGCGCTAGGACGAAGAAGCTTGGACTAAGGAGGGAAAAAATAGGGTCTTATGGGCCAAAAAAGAATAGTTAATTGTGGTAGCGTCATCTTTTAGCCATCCTTCATGTACAAGAAGGGGTGAGGTAAAAAGTAAGGCAGTTAGTCAGTTAAAATTGGAAATAGCTTTTAGCCTTTGGAGAGATACAAACCTCTTGAACTTATTCCCTTTAGTTAACAAGAGTTATATTCCACTTTTTAACATGGAGCACAATAACAAGGATTATCCAGCCCTTTTTGAATCTATTATTTACTTGGCCTTGTATTGGTGTCACTCTATCCACCCTTTTTGTAGCTATGGTTTAACCACTCTATTATCTCAGTGGCATAGTCTTATACATATGTTTCGATAGGTTGTAACTTTTCAAATATCAATGAAAGTTTTTGTTTCCTATTAAAAAAAACATATAAAAAACAAACAAGAGTTATATTCCTTCTTGAGGCTGGCTGTATCAGACTCATTCTTACACTGAACCAAAATTGAAGAAGCAAAGCTAACCCTTTTTTTCTTCTTCTTCCTTTTTTTCCTCCTGAAATCTGACAGGTATGAGACGCGATGTTAATGTTTTAATCTTTCTTGATGTGAGAAAAGCTCTGGACGGTACTGTTGAATCCTCTTTTCTTTTCTTCTCATTGACATTTGTATATTAAGAAAGTATAAAAGTATAGCGATTAGTATAAGAAACGTGATGATCAATGATAACATTTTTTGTTTATATTTCAGATGGAATGAAGCTTTACATTTCGGACAACAAGGTCATTCTGACGGAAGGTTTCGATGGGGTCGTGGCGGTCCAATACTTCCAGAAAATTGAGTCATGGCCGAATCGACAACATATTCCTTATTAGCCTGGATTAGAGACGGTACATCGTACATGATTAATCATTTCCTATAAAAATTGAATCATGTTTATATACCTAGACATCGTTATTAACACATTCAATATTTTACTCTAGACGTAATTATAACAGGGAATTTCTGCTTCGATTTGAACCAGATTATGTAACTTTTATGGCATGAGTTCCATAAGTTTGGAACTTGGGAAATTTTGGCTTTTAACTTAGCTGCAAAAAGTTCCATCCTTCATATGAACTTTTTGATGAATCCATTCATGGACTTTTGGCAACAAGGTCCAGATTTCTTGGTGAAGTAATGTAAGTCACTTTTAATGTTACAAGTTGTAATATGAGAAAGTAAACTAAGTGATTCAGTTTTTCTCAGCTAGTGATGGTTATTACTAACCATTTTAATGCATACAAAATATACACAGGACTTGATTTGTTTGTAAATTGACTCATTGTTTGATATGATTTTGATGGTGG CACCGTCGTCTTCAACACGATGTGGTCTTCTGTTGTTACCAACTGCGGCACCAAAATTCTGCGCTACCGGTCTCTCTTGCTTCCACGTGTCCTCATCGCTCCGATTTCTCCTTCTCTATCTTCCATGGATAGAAGCAATTCCTCCTCCTTTTCTTCTTCTGTACATTCCAGCAAAAGTGGTGGAAGAGGAAGAGGCTTGGATATGAGGAATGATCGAGAAAGATCGAGAGGACGCGGCGGAGGAAGCGGCGGCGGCGACGGTGGCGCTGGTAAAGACAGAATCGACGCTCTTGGTAGACTATTGACACGTATCTTGCGCCATATGGCTTCGGAATTGAACTTGAATATGAGGAATGATGGATATGTCAAAGTTCAGGATTTGCTAAAGCTGAATTTGAAAACATTTGCCAATATCCCGCTTAAATCGCACACAATCGATGACATAAGGGAGGCTGTGAGGAAGGATAATAAGCAGCGTTTTGGCCTCCTCGAAGAGGATGGAGAGCTCTTAATTCGAGCAAACCAAGGCCATACAGTCACGGTGGTTGAAACTGAAAGCTTATTAAAACCAATAATTTCGGCCGAGGAGTTTCCAGTTTGTGTACACGGTACTTACAAGAAGAATTTGGAATCAATTCTGGAATCTGGTTTGAAACGCATGAAAAGATTGCATGTACATTTCTCTTGTGGTTTGCCAACGGATGGGGAGGTTATTAGTGGTATGAGACGCGATGTTAATGTTTTAATCTTTCTTGATGTGAGAAAAGCTCTGGACGATGGAATGAAGCTTTACATTTCGGACAACAAGGTCATTCTGACGGAAGGTTTCGATGGGGTCGTGGCGGTCCAATACTTCCAGAAAATTGAGTCATGGCCGAATCGACAACATATTCCTTATTAGCCTGGATTAGAGACGGTACATCGTACATGATTAATCATTTCCTATAAAAATTGAATCATGTTTATATACCTAGACATCGTTATTAACACATTCAATATTTTACTCTAGACGTAATTATAACAGGGAATTTCTGCTTCGATTTGAACCAGATTATGTAACTTTTATGGCATGAGTTCCATAAGTTTGGAACTTGGGAAATTTTGGCTTTTAACTTAGCTGCAAAAAGTTCCATCCTTCATATGAACTTTTTGATGAATCCATTCATGGACTTTTGGCAACAAGGTCCAGATTTCTTGGTGAAGTAATGTAAGTCACTTTTAATGTTACAAGTTGTAATATGAGAAAGTAAACTAAGTGATTCAGTTTTTCTCAGCTAGTGATGGTTATTACTAACCATTTTAATGCATACAAAATATACACAGGACTTGATTTGTTTGTAAATTGACTCATTGTTTGATATGATTTTGATGGTGG ATGTGGTCTTCTGTTGTTACCAACTGCGGCACCAAAATTCTGCGCTACCGGTCTCTCTTGCTTCCACGTGTCCTCATCGCTCCGATTTCTCCTTCTCTATCTTCCATGGATAGAAGCAATTCCTCCTCCTTTTCTTCTTCTGTACATTCCAGCAAAAGTGGTGGAAGAGGAAGAGGCTTGGATATGAGGAATGATCGAGAAAGATCGAGAGGACGCGGCGGAGGAAGCGGCGGCGGCGACGGTGGCGCTGGTAAAGACAGAATCGACGCTCTTGGTAGACTATTGACACGTATCTTGCGCCATATGGCTTCGGAATTGAACTTGAATATGAGGAATGATGGATATGTCAAAGTTCAGGATTTGCTAAAGCTGAATTTGAAAACATTTGCCAATATCCCGCTTAAATCGCACACAATCGATGACATAAGGGAGGCTGTGAGGAAGGATAATAAGCAGCGTTTTGGCCTCCTCGAAGAGGATGGAGAGCTCTTAATTCGAGCAAACCAAGGCCATACAGTCACGGTGGTTGAAACTGAAAGCTTATTAAAACCAATAATTTCGGCCGAGGAGTTTCCAGTTTGTGTACACGGTACTTACAAGAAGAATTTGGAATCAATTCTGGAATCTGGTTTGAAACGCATGAAAAGATTGCATGTACATTTCTCTTGTGGTTTGCCAACGGATGGGGAGGTTATTAGTGGTATGAGACGCGATGTTAATGTTTTAATCTTTCTTGATGTGAGAAAAGCTCTGGACGATGGAATGAAGCTTTACATTTCGGACAACAAGGTCATTCTGACGGAAGGTTTCGATGGGGTCGTGGCGGTCCAATACTTCCAGAAAATTGAGTCATGGCCGAATCGACAACATATTCCTTATTAG MWSSVVTNCGTKILRYRSLLLPRVLIAPISPSLSSMDRSNSSSFSSSVHSSKSGGRGRGLDMRNDRERSRGRGGGSGGGDGGAGKDRIDALGRLLTRILRHMASELNLNMRNDGYVKVQDLLKLNLKTFANIPLKSHTIDDIREAVRKDNKQRFGLLEEDGELLIRANQGHTVTVVETESLLKPIISAEEFPVCVHGTYKKNLESILESGLKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLDVRKALDDGMKLYISDNKVILTEGFDGVVAVQYFQKIESWPNRQHIPY Homology
BLAST of Sed0011315 vs. NCBI nr
Match: TYK17519.1 (tRNA 2'-phosphotransferase 1 [Cucumis melo var. makuwa]) HSP 1 Score: 495.4 bits (1274), Expect = 3.5e-136 Identity = 256/297 (86.20%), Postives = 275/297 (92.59%), Query Frame = 0
BLAST of Sed0011315 vs. NCBI nr
Match: XP_038893116.1 (tRNA 2'-phosphotransferase 1 [Benincasa hispida]) HSP 1 Score: 493.8 bits (1270), Expect = 1.0e-135 Identity = 256/297 (86.20%), Postives = 274/297 (92.26%), Query Frame = 0
BLAST of Sed0011315 vs. NCBI nr
Match: XP_008438171.1 (PREDICTED: tRNA 2'-phosphotransferase 1 [Cucumis melo]) HSP 1 Score: 492.7 bits (1267), Expect = 2.3e-135 Identity = 255/297 (85.86%), Postives = 275/297 (92.59%), Query Frame = 0
BLAST of Sed0011315 vs. NCBI nr
Match: XP_022147085.1 (tRNA 2'-phosphotransferase 1 [Momordica charantia] >XP_022147086.1 tRNA 2'-phosphotransferase 1 [Momordica charantia]) HSP 1 Score: 490.0 bits (1260), Expect = 1.5e-134 Identity = 255/297 (85.86%), Postives = 274/297 (92.26%), Query Frame = 0
BLAST of Sed0011315 vs. NCBI nr
Match: XP_004133917.2 (tRNA 2'-phosphotransferase 1 isoform X1 [Cucumis sativus] >KGN56605.1 hypothetical protein Csa_009546 [Cucumis sativus]) HSP 1 Score: 485.0 bits (1247), Expect = 4.7e-133 Identity = 250/297 (84.18%), Postives = 272/297 (91.58%), Query Frame = 0
BLAST of Sed0011315 vs. ExPASy Swiss-Prot
Match: Q5EAR5 (tRNA 2'-phosphotransferase 1 OS=Danio rerio OX=7955 GN=trpt1 PE=2 SV=2) HSP 1 Score: 140.6 bits (353), Expect = 2.9e-32 Identity = 87/219 (39.73%), Postives = 132/219 (60.27%), Query Frame = 0
BLAST of Sed0011315 vs. ExPASy Swiss-Prot
Match: O14045 (Putative tRNA 2'-phosphotransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC2C4.12c PE=3 SV=2) HSP 1 Score: 137.5 bits (345), Expect = 2.4e-31 Identity = 73/192 (38.02%), Postives = 117/192 (60.94%), Query Frame = 0
BLAST of Sed0011315 vs. ExPASy Swiss-Prot
Match: Q8K3A2 (tRNA 2'-phosphotransferase 1 OS=Mus musculus OX=10090 GN=Trpt1 PE=2 SV=2) HSP 1 Score: 128.3 bits (321), Expect = 1.5e-28 Identity = 84/201 (41.79%), Postives = 117/201 (58.21%), Query Frame = 0
BLAST of Sed0011315 vs. ExPASy Swiss-Prot
Match: Q3ZBM7 (tRNA 2'-phosphotransferase 1 OS=Bos taurus OX=9913 GN=TRPT1 PE=2 SV=3) HSP 1 Score: 120.6 bits (301), Expect = 3.1e-26 Identity = 80/201 (39.80%), Postives = 116/201 (57.71%), Query Frame = 0
BLAST of Sed0011315 vs. ExPASy Swiss-Prot
Match: Q86TN4 (tRNA 2'-phosphotransferase 1 OS=Homo sapiens OX=9606 GN=TRPT1 PE=1 SV=2) HSP 1 Score: 112.5 bits (280), Expect = 8.3e-24 Identity = 83/221 (37.56%), Postives = 117/221 (52.94%), Query Frame = 0
BLAST of Sed0011315 vs. ExPASy TrEMBL
Match: A0A5D3D3K0 (2'-phosphotransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003870 PE=3 SV=1) HSP 1 Score: 495.4 bits (1274), Expect = 1.7e-136 Identity = 256/297 (86.20%), Postives = 275/297 (92.59%), Query Frame = 0
BLAST of Sed0011315 vs. ExPASy TrEMBL
Match: A0A1S3AVU4 (2'-phosphotransferase OS=Cucumis melo OX=3656 GN=LOC103483358 PE=3 SV=1) HSP 1 Score: 492.7 bits (1267), Expect = 1.1e-135 Identity = 255/297 (85.86%), Postives = 275/297 (92.59%), Query Frame = 0
BLAST of Sed0011315 vs. ExPASy TrEMBL
Match: A0A6J1CZ57 (2'-phosphotransferase OS=Momordica charantia OX=3673 GN=LOC111016108 PE=3 SV=1) HSP 1 Score: 490.0 bits (1260), Expect = 7.1e-135 Identity = 255/297 (85.86%), Postives = 274/297 (92.26%), Query Frame = 0
BLAST of Sed0011315 vs. ExPASy TrEMBL
Match: A0A0A0L3T7 (2'-phosphotransferase OS=Cucumis sativus OX=3659 GN=Csa_3G126200 PE=3 SV=1) HSP 1 Score: 485.0 bits (1247), Expect = 2.3e-133 Identity = 250/297 (84.18%), Postives = 272/297 (91.58%), Query Frame = 0
BLAST of Sed0011315 vs. ExPASy TrEMBL
Match: A0A6J1I9U5 (2'-phosphotransferase OS=Cucurbita maxima OX=3661 GN=LOC111472467 PE=3 SV=1) HSP 1 Score: 474.9 bits (1221), Expect = 2.4e-130 Identity = 249/293 (84.98%), Postives = 268/293 (91.47%), Query Frame = 0
BLAST of Sed0011315 vs. TAIR 10
Match: AT2G45330.1 (RNA 2'-phosphotransferase, Tpt1 / KptA family ) HSP 1 Score: 378.3 bits (970), Expect = 5.8e-105 Identity = 203/293 (69.28%), Postives = 235/293 (80.20%), Query Frame = 0
BLAST of Sed0011315 vs. TAIR 10
Match: AT2G45330.2 (RNA 2'-phosphotransferase, Tpt1 / KptA family ) HSP 1 Score: 370.9 bits (951), Expect = 9.2e-103 Identity = 189/267 (70.79%), Postives = 220/267 (82.40%), Query Frame = 0
BLAST of Sed0011315 vs. TAIR 10
Match: AT5G23600.1 (RNA 2'-phosphotransferase, Tpt1 / KptA family ) HSP 1 Score: 335.9 bits (860), Expect = 3.3e-92 Identity = 160/208 (76.92%), Postives = 186/208 (89.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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