Sed0011141 (gene) Chayote v1

Overview


Name	Sed0011141
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ribosomal protein L5
Location	LG13: 18386253 .. 18386810 (+)
RNA-Seq Expression	Sed0011141
Synteny	Sed0011141

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTCACTCTCTTTTCATTACGAAGATGTATCACGTCAGGATCCGTTGCTCAAACTGAATCACGCCAACGTTATGGAAGTTCCTGGATCGTGTGAAATAAGAGTCGTACCAAAGGCACCCTATGATTTCATAATCAAAAATGGAAAATTGGCTATGGAGATTCCGCGCGGTCAGAAATTGATACAGACACAAAGGGGTTCGACAGGAAAGTCGTTTCGATCCAATCCATTCTTGGAGTCAAATAAAGACAAAGGATATGTCAGTGACCTAGCACGACAAAGCACTCTCCGAGGGCATGGAATGTCGAATTTTTCGGTCAGAATCTCGACAGTAATGTCTCTCTTAGATTCTCCGGTCGAAATACGGGAAAACTCCATTCAATTCTCGATGGAAACGGAGTTTTGCGAATTCTCCCCGGAACTGGAAGATCATTTCGAGATCTTCGAACATATTCTAGGGTTCAATGTGACTATTGTCACTTCGGCCAACACACAAGATGAGACTTTACCACCGTGGAGCGGCTTTTTGCAAAAAGATGAGGGGGAAACTCAGTAA

mRNA sequence

ATGTTTTCACTCTCTTTTCATTACGAAGATGTATCACGTCAGGATCCGTTGCTCAAACTGAATCACGCCAACGTTATGGAAGTTCCTGGATCGTGTGAAATAAGAGTCGTACCAAAGGCACCCTATGATTTCATAATCAAAAATGGAAAATTGGCTATGGAGATTCCGCGCGGTCAGAAATTGATACAGACACAAAGGGGTTCGACAGGAAAGTCGTTTCGATCCAATCCATTCTTGGAGTCAAATAAAGACAAAGGATATGTCAGTGACCTAGCACGACAAAGCACTCTCCGAGGGCATGGAATGTCGAATTTTTCGGTCAGAATCTCGACAGTAATGTCTCTCTTAGATTCTCCGGTCGAAATACGGGAAAACTCCATTCAATTCTCGATGGAAACGGAGTTTTGCGAATTCTCCCCGGAACTGGAAGATCATTTCGAGATCTTCGAACATATTCTAGGGTTCAATGTGACTATTGTCACTTCGGCCAACACACAAGATGAGACTTTACCACCGTGGAGCGGCTTTTTGCAAAAAGATGAGGGGGAAACTCAGTAA

Coding sequence (CDS)

ATGTTTTCACTCTCTTTTCATTACGAAGATGTATCACGTCAGGATCCGTTGCTCAAACTGAATCACGCCAACGTTATGGAAGTTCCTGGATCGTGTGAAATAAGAGTCGTACCAAAGGCACCCTATGATTTCATAATCAAAAATGGAAAATTGGCTATGGAGATTCCGCGCGGTCAGAAATTGATACAGACACAAAGGGGTTCGACAGGAAAGTCGTTTCGATCCAATCCATTCTTGGAGTCAAATAAAGACAAAGGATATGTCAGTGACCTAGCACGACAAAGCACTCTCCGAGGGCATGGAATGTCGAATTTTTCGGTCAGAATCTCGACAGTAATGTCTCTCTTAGATTCTCCGGTCGAAATACGGGAAAACTCCATTCAATTCTCGATGGAAACGGAGTTTTGCGAATTCTCCCCGGAACTGGAAGATCATTTCGAGATCTTCGAACATATTCTAGGGTTCAATGTGACTATTGTCACTTCGGCCAACACACAAGATGAGACTTTACCACCGTGGAGCGGCTTTTTGCAAAAAGATGAGGGGGAAACTCAGTAA

Protein sequence

MFSLSFHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQKLIQTQRGSTGKSFRSNPFLESNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPVEIRENSIQFSMETEFCEFSPELEDHFEIFEHILGFNVTIVTSANTQDETLPPWSGFLQKDEGETQ

Homology

[Close]

BLAST of Sed0011141 vs. NCBI nr
Match: YP_009913650.1 (ribosomal protein L5 [Luffa acutangula] >QLJ93020.1 ribosomal protein L5 [Luffa acutangula])

HSP 1 Score: 370.5 bits (950), Expect = 8.2e-99
Identity = 183/185 (98.92%), Postives = 183/185 (98.92%), Query Frame = 0


Query: 1   MFSLSFHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK 60
           MFSL FHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK
Sbjct: 1   MFSLDFHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK 60

Query: 61  LIQTQRGSTGKSFRSNPFLESNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV 120
            IQTQRGSTGKSFRSNPFLESNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV
Sbjct: 61  FIQTQRGSTGKSFRSNPFLESNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV 120

Query: 121 EIRENSIQFSMETEFCEFSPELEDHFEIFEHILGFNVTIVTSANTQDETLPPWSGFLQKD 180
           EIRENSIQFSMETEFCEFSPELEDHFEIFEHILGFNVTIVTSANTQDETLPPWSGFLQKD
Sbjct: 121 EIRENSIQFSMETEFCEFSPELEDHFEIFEHILGFNVTIVTSANTQDETLPPWSGFLQKD 180

Query: 181 EGETQ 186
           EGETQ
Sbjct: 181 EGETQ 185

[Close]

BLAST of Sed0011141 vs. NCBI nr
Match: YP_007516856.1 (ribosomal protein subunit L5 [Glycine max] >YP_009532801.1 ribosomal protein L5 [Glycine soja] >QWX88244.1 ribosomal protein L5 [Robinia pseudoacacia] >QXE45615.1 ribosomal protein L5 [Pachyrhizus erosus] >AFR34300.1 ribosomal protein subunit L5 [Glycine max] >AYD72949.1 ribosomal protein L5 [Glycine soja])

HSP 1 Score: 363.2 bits (931), Expect = 1.3e-96
Identity = 180/185 (97.30%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 1   MFSLSFHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK 60
           MF L FHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK
Sbjct: 1   MFPLHFHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK 60

Query: 61  LIQTQRGSTGKSFRSNPFLESNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV 120
            IQTQRGSTGKSFRSNPFL SNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV
Sbjct: 61  FIQTQRGSTGKSFRSNPFLGSNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV 120

Query: 121 EIRENSIQFSMETEFCEFSPELEDHFEIFEHILGFNVTIVTSANTQDETLPPWSGFLQKD 180
           EIRENSIQFSMETEFCEFSPELEDHFEIFEHI GFNVTIVTSANTQDETLPPWSGFLQKD
Sbjct: 121 EIRENSIQFSMETEFCEFSPELEDHFEIFEHIRGFNVTIVTSANTQDETLPPWSGFLQKD 180

Query: 181 EGETQ 186
           EGETQ
Sbjct: 181 EGETQ 185

[Close]

BLAST of Sed0011141 vs. NCBI nr
Match: YP_007889799.1 (ribosomal protein L5 [Vigna angularis] >BAN15004.1 ribosomal protein L5 [Vigna angularis])

HSP 1 Score: 361.7 bits (927), Expect = 3.8e-96
Identity = 179/185 (96.76%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 1   MFSLSFHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK 60
           MF L FHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK
Sbjct: 1   MFPLHFHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK 60

Query: 61  LIQTQRGSTGKSFRSNPFLESNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV 120
            IQTQRGSTGKSFRSNPFL SNK+KGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV
Sbjct: 61  FIQTQRGSTGKSFRSNPFLGSNKEKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV 120

Query: 121 EIRENSIQFSMETEFCEFSPELEDHFEIFEHILGFNVTIVTSANTQDETLPPWSGFLQKD 180
           EIRENSIQFSMETEFCEFSPELEDHFEIFEHI GFNVTIVTSANTQDETLPPWSGFLQKD
Sbjct: 121 EIRENSIQFSMETEFCEFSPELEDHFEIFEHIRGFNVTIVTSANTQDETLPPWSGFLQKD 180

Query: 181 EGETQ 186
           EGETQ
Sbjct: 181 EGETQ 185

[Close]

BLAST of Sed0011141 vs. NCBI nr
Match: YP_009430373.1 (ribosomal protein L5 [Bupleurum falcatum] >YP_010035061.1 ribosomal protein L7 [Glycyrrhiza uralensis] >QWX88279.1 ribosomal protein L5 [Glycyrrhiza glabra] >ARR27504.1 ribosomal protein L5 [Bupleurum falcatum] >QOX10084.1 ribosomal protein L7 [Glycyrrhiza uralensis] >QVY59152.1 ribosomal protein L7 [Glycyrrhiza uralensis])

HSP 1 Score: 360.9 bits (925), Expect = 6.5e-96
Identity = 179/185 (96.76%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 1   MFSLSFHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK 60
           MF L+FHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK
Sbjct: 1   MFPLNFHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK 60

Query: 61  LIQTQRGSTGKSFRSNPFLESNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV 120
            IQTQRGSTGKSFRSNPFL SNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV
Sbjct: 61  FIQTQRGSTGKSFRSNPFLGSNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV 120

Query: 121 EIRENSIQFSMETEFCEFSPELEDHFEIFEHILGFNVTIVTSANTQDETLPPWSGFLQKD 180
           EIRENSIQFSMETEFCEFSPELEDHFEIFE I GFNVTIVTSANTQDETLPPWSGFLQKD
Sbjct: 121 EIRENSIQFSMETEFCEFSPELEDHFEIFEQIRGFNVTIVTSANTQDETLPPWSGFLQKD 180

Query: 181 EGETQ 186
           EGETQ
Sbjct: 181 EGETQ 185

[Close]

BLAST of Sed0011141 vs. NCBI nr
Match: YP_009430372.1 (orf229 [Bupleurum falcatum] >ARR27505.1 orf229 [Bupleurum falcatum])

HSP 1 Score: 360.9 bits (925), Expect = 6.5e-96
Identity = 179/185 (96.76%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 1   MFSLSFHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK 60
           MF L+FHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK
Sbjct: 66  MFPLNFHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK 125

Query: 61  LIQTQRGSTGKSFRSNPFLESNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV 120
            IQTQRGSTGKSFRSNPFL SNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV
Sbjct: 126 FIQTQRGSTGKSFRSNPFLGSNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV 185

Query: 121 EIRENSIQFSMETEFCEFSPELEDHFEIFEHILGFNVTIVTSANTQDETLPPWSGFLQKD 180
           EIRENSIQFSMETEFCEFSPELEDHFEIFE I GFNVTIVTSANTQDETLPPWSGFLQKD
Sbjct: 186 EIRENSIQFSMETEFCEFSPELEDHFEIFEQIRGFNVTIVTSANTQDETLPPWSGFLQKD 245

Query: 181 EGETQ 186
           EGETQ
Sbjct: 246 EGETQ 250

[Close]

BLAST of Sed0011141 vs. ExPASy Swiss-Prot
Match: P42793 (60S ribosomal protein L5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL5 PE=1 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 5.5e-90
Identity = 167/185 (90.27%), Postives = 172/185 (92.97%), Query Frame = 0


Query: 1   MFSLSFHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK 60
           MF L+FHYEDV RQD LLKLN+ANVMEVPG CEIRVVPKAPY+FIIKNGKLAMEIP GQK
Sbjct: 1   MFPLNFHYEDVLRQDLLLKLNYANVMEVPGLCEIRVVPKAPYNFIIKNGKLAMEIPCGQK 60

Query: 61  LIQTQRGSTGKSFRSNPFLESNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV 120
            IQTQRGSTGKSFRSNPFL SNKDKGYVSDLARQSTLRGHGMSNF VRI TVMSLLD PV
Sbjct: 61  FIQTQRGSTGKSFRSNPFLGSNKDKGYVSDLARQSTLRGHGMSNFLVRILTVMSLLDFPV 120

Query: 121 EIRENSIQFSMETEFCEFSPELEDHFEIFEHILGFNVTIVTSANTQDETLPPWSGFLQKD 180
           EIR+NSIQFSMETEFCEFSPELEDHFEIFEHI GFNVTI+TSANTQDETL  WSGFLQKD
Sbjct: 121 EIRKNSIQFSMETEFCEFSPELEDHFEIFEHIRGFNVTIITSANTQDETLLLWSGFLQKD 180

Query: 181 EGETQ 186
           EGETQ
Sbjct: 181 EGETQ 185

[Close]

BLAST of Sed0011141 vs. ExPASy Swiss-Prot
Match: P49388 (60S ribosomal protein L5, mitochondrial OS=Brassica napus OX=3708 GN=RPL5 PE=3 SV=2)

HSP 1 Score: 320.9 bits (821), Expect = 9.7e-87
Identity = 160/185 (86.49%), Postives = 168/185 (90.81%), Query Frame = 0


Query: 1   MFSLSFHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK 60
           MF L+FHYEDVSRQDPLL      + +  GSCEIRVVP  PY+FIIKNGKLAMEIPRGQK
Sbjct: 1   MFPLNFHYEDVSRQDPLLNRITPTLWKFLGSCEIRVVPNGPYNFIIKNGKLAMEIPRGQK 60

Query: 61  LIQTQRGSTGKSFRSNPFLESNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV 120
            IQTQRGSTGKSFRSNPFL SNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLD PV
Sbjct: 61  FIQTQRGSTGKSFRSNPFLGSNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDFPV 120

Query: 121 EIRENSIQFSMETEFCEFSPELEDHFEIFEHILGFNVTIVTSANTQDETLPPWSGFLQKD 180
           EIR+NSIQFSMETEFCEF+P+L+DHFEIFEHI GFNVTIVTSANTQDETLP WSGFLQKD
Sbjct: 121 EIRKNSIQFSMETEFCEFAPQLQDHFEIFEHIRGFNVTIVTSANTQDETLPLWSGFLQKD 180

Query: 181 EGETQ 186
           EGETQ
Sbjct: 181 EGETQ 185

[Close]

BLAST of Sed0011141 vs. ExPASy Swiss-Prot
Match: Q05492 (60S ribosomal protein L5, mitochondrial OS=Oenothera berteroana OX=3950 GN=RPL5 PE=2 SV=2)

HSP 1 Score: 315.1 bits (806), Expect = 5.3e-85
Identity = 163/186 (87.63%), Postives = 168/186 (90.32%), Query Frame = 0


Query: 1   MFSLSFHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPK--APYDFIIKNGKLAMEIPRG 60
           MF L+FHYEDV RQD LLKLN ANVMEVPG CEIR+VPK  + YDFIIKNGKLAMEI RG
Sbjct: 1   MFPLNFHYEDVLRQDLLLKLNLANVMEVPGLCEIRIVPKTSSTYDFIIKNGKLAMEILRG 60

Query: 61  QKLIQTQRGSTGKSFRSNPFLESNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDS 120
           QK IQT+RGSTGKSFRSNPFLESNKDKGYVSDLARQS LRGHGMSNF VRI TVMSLLDS
Sbjct: 61  QKFIQTERGSTGKSFRSNPFLESNKDKGYVSDLARQSILRGHGMSNFLVRILTVMSLLDS 120

Query: 121 PVEIRENSIQFSMETEFCEFSPELEDHFEIFEHILGFNVTIVTSANTQDETLPPWSGFLQ 180
            VEIRENSIQFSMETEFCEFSPELEDHFEIFEHI  FNVTIVTSANTQDETL  WSGFLQ
Sbjct: 121 RVEIRENSIQFSMETEFCEFSPELEDHFEIFEHIRRFNVTIVTSANTQDETLLLWSGFLQ 180

Query: 181 KDEGET 185
           KDEGE+
Sbjct: 181 KDEGES 186

[Close]

BLAST of Sed0011141 vs. ExPASy Swiss-Prot
Match: P51409 (60S ribosomal protein L5, mitochondrial OS=Solanum tuberosum OX=4113 GN=RPL5 PE=2 SV=2)

HSP 1 Score: 289.7 bits (740), Expect = 2.4e-77
Identity = 159/187 (85.03%), Postives = 163/187 (87.17%), Query Frame = 0


Query: 1   MFSLSFHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPK-APYDFIIKNGKLAMEIPRGQ 60
           MF L FHYEDV RQD LLKLN+ANVMEVPG C+I VVPK AP    IKNGKLAMEI  GQ
Sbjct: 5   MFPLYFHYEDVLRQDLLLKLNYANVMEVPGLCKIIVVPKTAP---SIKNGKLAMEISCGQ 64

Query: 61  KLIQTQRGSTGKSFRSNPFLESNKD-KGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDS 120
           KL   QR STGKSFRSNPFL SNKD KGYVSDLARQSTLRGHGMS+F VRISTVMSLLDS
Sbjct: 65  KL--KQRASTGKSFRSNPFLGSNKDKKGYVSDLARQSTLRGHGMSHFLVRISTVMSLLDS 124

Query: 121 PVEIRENSIQFSMETEFCEFSPELEDHFEIFEHILGFNVTIVTSANTQDETLPPWSGFLQ 180
           P+EIRE SIQFSMETEFCEFSPELEDHFEIFEHI GFNVTIVTSANTQDETL  WSGFLQ
Sbjct: 125 PLEIRERSIQFSMETEFCEFSPELEDHFEIFEHIRGFNVTIVTSANTQDETLLLWSGFLQ 184

Query: 181 KDEGETQ 186
           KDEGETQ
Sbjct: 185 KDEGETQ 186

[Close]

BLAST of Sed0011141 vs. ExPASy Swiss-Prot
Match: P26860 (60S ribosomal protein L5, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPL5 PE=3 SV=2)

HSP 1 Score: 207.6 bits (527), Expect = 1.2e-52
Identity = 115/181 (63.54%), Postives = 136/181 (75.14%), Query Frame = 0


Query: 4   LSFHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQKLIQ 63
           L FHY  V R D LLK+N+ N+MEVP  C+I VVPKAP +F IKN KLAMEI  GQK IQ
Sbjct: 9   LEFHYNQVIRPDLLLKINYENIMEVPRLCKIIVVPKAPSNF-IKNVKLAMEIVCGQKFIQ 68

Query: 64  TQ-RGSTGKSFRSNPFL---ESNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSP 123
           T+ RGSTGKSFR N F+   ES +D GYV+ LAR STLRGH M NF  ++ T++S  D P
Sbjct: 69  TRSRGSTGKSFRFNKFVLNQESKRDTGYVTYLAR-STLRGHIMYNFLEKLVTIISFYDYP 128

Query: 124 VEIRENSIQFSMETEFCEFSPELEDHFEIFEHILGFNVTIVTSANTQDETLPPWSGFLQK 181
           V+I++NSIQ SM T      PE++DHFEIFEHI GF+VTIVTSANTQDET+  WSGFLQK
Sbjct: 129 VKIQKNSIQLSMATSLLRLFPEIQDHFEIFEHIRGFDVTIVTSANTQDETVILWSGFLQK 187

[Close]

BLAST of Sed0011141 vs. ExPASy TrEMBL
Match: A0A7D5Y005 (Ribosomal protein L5 OS=Luffa acutangula OX=56866 GN=rpl5 PE=3 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 4.0e-99
Identity = 183/185 (98.92%), Postives = 183/185 (98.92%), Query Frame = 0


Query: 1   MFSLSFHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK 60
           MFSL FHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK
Sbjct: 1   MFSLDFHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK 60

Query: 61  LIQTQRGSTGKSFRSNPFLESNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV 120
            IQTQRGSTGKSFRSNPFLESNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV
Sbjct: 61  FIQTQRGSTGKSFRSNPFLESNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV 120

Query: 121 EIRENSIQFSMETEFCEFSPELEDHFEIFEHILGFNVTIVTSANTQDETLPPWSGFLQKD 180
           EIRENSIQFSMETEFCEFSPELEDHFEIFEHILGFNVTIVTSANTQDETLPPWSGFLQKD
Sbjct: 121 EIRENSIQFSMETEFCEFSPELEDHFEIFEHILGFNVTIVTSANTQDETLPPWSGFLQKD 180

Query: 181 EGETQ 186
           EGETQ
Sbjct: 181 EGETQ 185

[Close]

BLAST of Sed0011141 vs. ExPASy TrEMBL
Match: A0A386JNB1 (Ribosomal protein L5 OS=Glycine soja OX=3848 GN=rpl5 PE=3 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 6.3e-97
Identity = 180/185 (97.30%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 1   MFSLSFHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK 60
           MF L FHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK
Sbjct: 1   MFPLHFHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK 60

Query: 61  LIQTQRGSTGKSFRSNPFLESNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV 120
            IQTQRGSTGKSFRSNPFL SNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV
Sbjct: 61  FIQTQRGSTGKSFRSNPFLGSNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV 120

Query: 121 EIRENSIQFSMETEFCEFSPELEDHFEIFEHILGFNVTIVTSANTQDETLPPWSGFLQKD 180
           EIRENSIQFSMETEFCEFSPELEDHFEIFEHI GFNVTIVTSANTQDETLPPWSGFLQKD
Sbjct: 121 EIRENSIQFSMETEFCEFSPELEDHFEIFEHIRGFNVTIVTSANTQDETLPPWSGFLQKD 180

Query: 181 EGETQ 186
           EGETQ
Sbjct: 181 EGETQ 185

[Close]

BLAST of Sed0011141 vs. ExPASy TrEMBL
Match: K7M8M6 (Ribosomal protein subunit L5 OS=Glycine max OX=3847 GN=rp15 PE=3 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 6.3e-97
Identity = 180/185 (97.30%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 1   MFSLSFHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK 60
           MF L FHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK
Sbjct: 1   MFPLHFHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK 60

Query: 61  LIQTQRGSTGKSFRSNPFLESNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV 120
            IQTQRGSTGKSFRSNPFL SNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV
Sbjct: 61  FIQTQRGSTGKSFRSNPFLGSNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV 120

Query: 121 EIRENSIQFSMETEFCEFSPELEDHFEIFEHILGFNVTIVTSANTQDETLPPWSGFLQKD 180
           EIRENSIQFSMETEFCEFSPELEDHFEIFEHI GFNVTIVTSANTQDETLPPWSGFLQKD
Sbjct: 121 EIRENSIQFSMETEFCEFSPELEDHFEIFEHIRGFNVTIVTSANTQDETLPPWSGFLQKD 180

Query: 181 EGETQ 186
           EGETQ
Sbjct: 181 EGETQ 185

[Close]

BLAST of Sed0011141 vs. ExPASy TrEMBL
Match: N0DKE4 (Ribosomal protein L5 OS=Phaseolus angularis OX=3914 GN=rpl5 PE=3 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 1.8e-96
Identity = 179/185 (96.76%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 1   MFSLSFHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK 60
           MF L FHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK
Sbjct: 1   MFPLHFHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK 60

Query: 61  LIQTQRGSTGKSFRSNPFLESNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV 120
            IQTQRGSTGKSFRSNPFL SNK+KGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV
Sbjct: 61  FIQTQRGSTGKSFRSNPFLGSNKEKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV 120

Query: 121 EIRENSIQFSMETEFCEFSPELEDHFEIFEHILGFNVTIVTSANTQDETLPPWSGFLQKD 180
           EIRENSIQFSMETEFCEFSPELEDHFEIFEHI GFNVTIVTSANTQDETLPPWSGFLQKD
Sbjct: 121 EIRENSIQFSMETEFCEFSPELEDHFEIFEHIRGFNVTIVTSANTQDETLPPWSGFLQKD 180

Query: 181 EGETQ 186
           EGETQ
Sbjct: 181 EGETQ 185

[Close]

BLAST of Sed0011141 vs. ExPASy TrEMBL
Match: A0A288W7C7 (Orf229 OS=Bupleurum falcatum OX=46367 PE=3 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 3.1e-96
Identity = 179/185 (96.76%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 1   MFSLSFHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK 60
           MF L+FHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK
Sbjct: 66  MFPLNFHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK 125

Query: 61  LIQTQRGSTGKSFRSNPFLESNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV 120
            IQTQRGSTGKSFRSNPFL SNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV
Sbjct: 126 FIQTQRGSTGKSFRSNPFLGSNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV 185

Query: 121 EIRENSIQFSMETEFCEFSPELEDHFEIFEHILGFNVTIVTSANTQDETLPPWSGFLQKD 180
           EIRENSIQFSMETEFCEFSPELEDHFEIFE I GFNVTIVTSANTQDETLPPWSGFLQKD
Sbjct: 186 EIRENSIQFSMETEFCEFSPELEDHFEIFEQIRGFNVTIVTSANTQDETLPPWSGFLQKD 245

Query: 181 EGETQ 186
           EGETQ
Sbjct: 246 EGETQ 250

[Close]

BLAST of Sed0011141 vs. TAIR 10
Match: AT2G07725.1 (Ribosomal L5P family protein )

HSP 1 Score: 351.3 bits (900), Expect = 4.8e-97
Identity = 174/185 (94.05%), Postives = 178/185 (96.22%), Query Frame = 0


Query: 1   MFSLSFHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK 60
           MF L+FHYEDVSRQDPLLK NHANVMEVPGSCEIRVVPKAPY+FIIKNGKLAMEIPRGQK
Sbjct: 1   MFPLNFHYEDVSRQDPLLKPNHANVMEVPGSCEIRVVPKAPYNFIIKNGKLAMEIPRGQK 60

Query: 61  LIQTQRGSTGKSFRSNPFLESNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV 120
            IQTQRGSTGKSFRSNPFL SNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLD PV
Sbjct: 61  FIQTQRGSTGKSFRSNPFLGSNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDFPV 120

Query: 121 EIRENSIQFSMETEFCEFSPELEDHFEIFEHILGFNVTIVTSANTQDETLPPWSGFLQKD 180
           EIR+NSIQFSMETEFCEFSPELEDHFEIFEHI GFNVTI+TSANTQDETLP WSGFLQKD
Sbjct: 121 EIRKNSIQFSMETEFCEFSPELEDHFEIFEHIRGFNVTIITSANTQDETLPLWSGFLQKD 180

Query: 181 EGETQ 186
           EGETQ
Sbjct: 181 EGETQ 185

[Close]

BLAST of Sed0011141 vs. TAIR 10
Match: ATMG00210.1 (ribosomal protein L5 )

HSP 1 Score: 351.3 bits (900), Expect = 4.8e-97
Identity = 174/185 (94.05%), Postives = 178/185 (96.22%), Query Frame = 0


Query: 1   MFSLSFHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQK 60
           MF L+FHYEDVSRQDPLLK NHANVMEVPGSCEIRVVPKAPY+FIIKNGKLAMEIPRGQK
Sbjct: 1   MFPLNFHYEDVSRQDPLLKPNHANVMEVPGSCEIRVVPKAPYNFIIKNGKLAMEIPRGQK 60

Query: 61  LIQTQRGSTGKSFRSNPFLESNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDSPV 120
            IQTQRGSTGKSFRSNPFL SNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLD PV
Sbjct: 61  FIQTQRGSTGKSFRSNPFLGSNKDKGYVSDLARQSTLRGHGMSNFSVRISTVMSLLDFPV 120

Query: 121 EIRENSIQFSMETEFCEFSPELEDHFEIFEHILGFNVTIVTSANTQDETLPPWSGFLQKD 180
           EIR+NSIQFSMETEFCEFSPELEDHFEIFEHI GFNVTI+TSANTQDETLP WSGFLQKD
Sbjct: 121 EIRKNSIQFSMETEFCEFSPELEDHFEIFEHIRGFNVTIITSANTQDETLPLWSGFLQKD 180

Query: 181 EGETQ 186
           EGETQ
Sbjct: 181 EGETQ 185

The following BLAST results are available for this feature:

BLAST of Sed0011141 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009913650.1	8.2e-99	98.92	ribosomal protein L5 [Luffa acutangula] >QLJ93020.1 ribosomal protein L5 [Luffa ...	[more]
YP_007516856.1	1.3e-96	97.30	ribosomal protein subunit L5 [Glycine max] >YP_009532801.1 ribosomal protein L5 ...	[more]
YP_007889799.1	3.8e-96	96.76	ribosomal protein L5 [Vigna angularis] >BAN15004.1 ribosomal protein L5 [Vigna a...	[more]
YP_009430373.1	6.5e-96	96.76	ribosomal protein L5 [Bupleurum falcatum] >YP_010035061.1 ribosomal protein L7 [...	[more]
YP_009430372.1	6.5e-96	96.76	orf229 [Bupleurum falcatum] >ARR27505.1 orf229 [Bupleurum falcatum]	[more]

BLAST of Sed0011141 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42793	5.5e-90	90.27	60S ribosomal protein L5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL5 ...	[more]
P49388	9.7e-87	86.49	60S ribosomal protein L5, mitochondrial OS=Brassica napus OX=3708 GN=RPL5 PE=3 S...	[more]
Q05492	5.3e-85	87.63	60S ribosomal protein L5, mitochondrial OS=Oenothera berteroana OX=3950 GN=RPL5 ...	[more]
P51409	2.4e-77	85.03	60S ribosomal protein L5, mitochondrial OS=Solanum tuberosum OX=4113 GN=RPL5 PE=...	[more]
P26860	1.2e-52	63.54	60S ribosomal protein L5, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPL5...	[more]

BLAST of Sed0011141 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7D5Y005	4.0e-99	98.92	Ribosomal protein L5 OS=Luffa acutangula OX=56866 GN=rpl5 PE=3 SV=1	[more]
A0A386JNB1	6.3e-97	97.30	Ribosomal protein L5 OS=Glycine soja OX=3848 GN=rpl5 PE=3 SV=1	[more]
K7M8M6	6.3e-97	97.30	Ribosomal protein subunit L5 OS=Glycine max OX=3847 GN=rp15 PE=3 SV=1	[more]
N0DKE4	1.8e-96	96.76	Ribosomal protein L5 OS=Phaseolus angularis OX=3914 GN=rpl5 PE=3 SV=1	[more]
A0A288W7C7	3.1e-96	96.76	Orf229 OS=Bupleurum falcatum OX=46367 PE=3 SV=1	[more]

BLAST of Sed0011141 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07725.1	4.8e-97	94.05	Ribosomal L5P family protein	[more]
ATMG00210.1	4.8e-97	94.05	ribosomal protein L5	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002132	Ribosomal protein L5	PIRSF	PIRSF002161	RPL5p_RPL5a_RPL11e_RPL5o	coord: 1..184 e-value: 8.0E-31 score: 104.8
IPR002132	Ribosomal protein L5	PANTHER	PTHR11994	60S RIBOSOMAL PROTEIN L11-RELATED	coord: 1..181
IPR022803	Ribosomal protein L5 domain superfamily	GENE3D	3.30.1440.10		coord: 3..178 e-value: 1.4E-23 score: 85.3
IPR022803	Ribosomal protein L5 domain superfamily	SUPERFAMILY	55282	RL5-like	coord: 1..178
None	No IPR available	PANTHER	PTHR11994:SF11	60S RIBOSOMAL PROTEIN L5, MITOCHONDRIAL	coord: 1..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0011141.1	Sed0011141.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)
cellular_component	GO:0005840	ribosome
molecular_function	GO:0008289	lipid binding
molecular_function	GO:0015078	proton transmembrane transporter activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome