Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCCAACAAATCTGAATTTCTAATGGCCGAAACCAAAGATTCAAGTGGCCACATAGTCGAAATCCCAGTAGAACAAGATAATTATCAGAATCAGAATCAAAAGCTTATGATGATCACCGTAATCCAACAGCACCCACTGAGGCAAATTTCCGAAAGCTCCGGCCATCTATTGTTGTTAAAACTCTGGCAACGAGACGAGCATCGGTTCGGCCTCCGAATCGGTTTCCAAGAGACGAAACTAGAGTCTCTAAAGCAACAAATCTTCCAACTGTGCTGCTACTTCTTCCTGTTCCACGCCCTCGCTTTAACGACATTGTTCACTTGCTCTGATCCGAATGCATGCCACAAATGGTGGGCTCCGGCAGTGTCGGTGGGGGGGACGTCGGGGGTGATGGTGGCGGCCGTGCAGGTGAAGTTGTGGGTGTATTGGAAGGCGGCAGGGGAGTTGGAGAGGGAGAAGAGTGAGAACAGAGCGCTTACAAGATGTGTTCAAGAGCTGAGAATGAAAGGGTGTTGTTTTGATTTGAGTAAAGAACCCCAAGTTGGGAACAGGATGAAGAGCTCAAGTGTGGAGATCAAATGGGGGGCCCTCACCTTCCTCTTTAGGATTCCCATTTCTCTTCTTTGCTTTTCAGGCCTTGTCTTTACTGCTTCTAACTTCATTCTTTGTGGCTTTTAGACTGACTGGTCACTGTTGTACACCACAAGACTAGTGTTGTTCAGTGTCTAATTATAACCAACACTGCTTCTGTGCCCACCTTCTTTCGTTTTTCTACCCAAAATGGATGGCCACATGTAACTTTCTGGCTTGTTACATTTATTTATACTCCA
mRNA sequence
GTCCAACAAATCTGAATTTCTAATGGCCGAAACCAAAGATTCAAGTGGCCACATAGTCGAAATCCCAGTAGAACAAGATAATTATCAGAATCAGAATCAAAAGCTTATGATGATCACCGTAATCCAACAGCACCCACTGAGGCAAATTTCCGAAAGCTCCGGCCATCTATTGTTGTTAAAACTCTGGCAACGAGACGAGCATCGGTTCGGCCTCCGAATCGGTTTCCAAGAGACGAAACTAGAGTCTCTAAAGCAACAAATCTTCCAACTGTGCTGCTACTTCTTCCTGTTCCACGCCCTCGCTTTAACGACATTGTTCACTTGCTCTGATCCGAATGCATGCCACAAATGGTGGGCTCCGGCAGTGTCGGTGGGGGGGACGTCGGGGGTGATGGTGGCGGCCGTGCAGGTGAAGTTGTGGGTGTATTGGAAGGCGGCAGGGGAGTTGGAGAGGGAGAAGAGTGAGAACAGAGCGCTTACAAGATGTGTTCAAGAGCTGAGAATGAAAGGGTGTTGTTTTGATTTGAGTAAAGAACCCCAAGTTGGGAACAGGATGAAGAGCTCAAGTGTGGAGATCAAATGGGGGGCCCTCACCTTCCTCTTTAGGATTCCCATTTCTCTTCTTTGCTTTTCAGGCCTTGTCTTTACTGCTTCTAACTTCATTCTTTGTGGCTTTTAGACTGACTGGTCACTGTTGTACACCACAAGACTAGTGTTGTTCAGTGTCTAATTATAACCAACACTGCTTCTGTGCCCACCTTCTTTCGTTTTTCTACCCAAAATGGATGGCCACATGTAACTTTCTGGCTTGTTACATTTATTTATACTCCA
Coding sequence (CDS)
ATGGCCGAAACCAAAGATTCAAGTGGCCACATAGTCGAAATCCCAGTAGAACAAGATAATTATCAGAATCAGAATCAAAAGCTTATGATGATCACCGTAATCCAACAGCACCCACTGAGGCAAATTTCCGAAAGCTCCGGCCATCTATTGTTGTTAAAACTCTGGCAACGAGACGAGCATCGGTTCGGCCTCCGAATCGGTTTCCAAGAGACGAAACTAGAGTCTCTAAAGCAACAAATCTTCCAACTGTGCTGCTACTTCTTCCTGTTCCACGCCCTCGCTTTAACGACATTGTTCACTTGCTCTGATCCGAATGCATGCCACAAATGGTGGGCTCCGGCAGTGTCGGTGGGGGGGACGTCGGGGGTGATGGTGGCGGCCGTGCAGGTGAAGTTGTGGGTGTATTGGAAGGCGGCAGGGGAGTTGGAGAGGGAGAAGAGTGAGAACAGAGCGCTTACAAGATGTGTTCAAGAGCTGAGAATGAAAGGGTGTTGTTTTGATTTGAGTAAAGAACCCCAAGTTGGGAACAGGATGAAGAGCTCAAGTGTGGAGATCAAATGGGGGGCCCTCACCTTCCTCTTTAGGATTCCCATTTCTCTTCTTTGCTTTTCAGGCCTTGTCTTTACTGCTTCTAACTTCATTCTTTGTGGCTTTTAG
Protein sequence
MAETKDSSGHIVEIPVEQDNYQNQNQKLMMITVIQQHPLRQISESSGHLLLLKLWQRDEHRFGLRIGFQETKLESLKQQIFQLCCYFFLFHALALTTLFTCSDPNACHKWWAPAVSVGGTSGVMVAAVQVKLWVYWKAAGELEREKSENRALTRCVQELRMKGCCFDLSKEPQVGNRMKSSSVEIKWGALTFLFRIPISLLCFSGLVFTASNFILCGF
Homology
BLAST of Sed0011072 vs. NCBI nr
Match:
XP_038905570.1 (uncharacterized protein LOC120091553 [Benincasa hispida] >XP_038905571.1 uncharacterized protein LOC120091553 [Benincasa hispida])
HSP 1 Score: 334.0 bits (855), Expect = 1.0e-87
Identity = 169/221 (76.47%), Postives = 189/221 (85.52%), Query Frame = 0
Query: 1 MAETKDSSGHIVEIPVEQDNY-QNQNQKLMMITVIQQHPLRQISESSGHLLLLKLWQRDE 60
MAETKDS HIVEIPVEQ+N+ QNQN MI+VIQ HPLRQISESSGHLLLLKLWQRDE
Sbjct: 1 MAETKDSGAHIVEIPVEQENHTQNQNP---MISVIQHHPLRQISESSGHLLLLKLWQRDE 60
Query: 61 HRFGLRIGFQETKLESLKQQIFQLCCYFFLFHALALTTLFTCSDPNACHKWWAPAVSVGG 120
H FGLRIG +ETK+ESLKQQIFQLCC+FFLFHAL+LT L+T SDPN C KWW PAV++G
Sbjct: 61 HLFGLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPNVCKKWWVPAVAMGA 120
Query: 121 TSGVMVAAVQVKLWVYWKAAGELEREKSENRALTRCVQELRMKGCCFDLSKEPQVGNRMK 180
TSGV V VQ+KLW+YWKA+G+L+REK+ENRALTRCVQELRMKG CF+LSKEPQ+GNRMK
Sbjct: 121 TSGVFVIVVQLKLWLYWKASGQLQREKTENRALTRCVQELRMKGSCFNLSKEPQIGNRMK 180
Query: 181 SSSVEIKWGALTFLFR--IPISLLCFSGLVFTASNFILCGF 219
SSSVEIKWG LT+ R I I LL FS +VF AS FILC F
Sbjct: 181 SSSVEIKWGPLTWFSRNFITIFLLGFSAIVFAASKFILCAF 218
BLAST of Sed0011072 vs. NCBI nr
Match:
XP_008449068.1 (PREDICTED: uncharacterized protein LOC103491049 [Cucumis melo] >XP_008449069.1 PREDICTED: uncharacterized protein LOC103491049 [Cucumis melo])
HSP 1 Score: 325.5 bits (833), Expect = 3.6e-85
Identity = 167/221 (75.57%), Postives = 187/221 (84.62%), Query Frame = 0
Query: 1 MAETKDS-SGHIVEIPVEQDNYQNQNQKLMMITVIQQHPLRQISESSGHLLLLKLWQRDE 60
MA+TKDS + HIVEIPVEQ+N+ QN +MI+VIQ HPLRQISESSGHLLLLKLWQRDE
Sbjct: 1 MAQTKDSTAAHIVEIPVEQENH-TQN---LMISVIQHHPLRQISESSGHLLLLKLWQRDE 60
Query: 61 HRFGLRIGFQETKLESLKQQIFQLCCYFFLFHALALTTLFTCSDPNACHKWWAPAVSVGG 120
H FGLRIG +ETK+ESLKQQIFQLCC+FFLFHAL+LT L+T SDP C KWW PAV +G
Sbjct: 61 HLFGLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVVIGA 120
Query: 121 TSGVMVAAVQVKLWVYWKAAGELEREKSENRALTRCVQELRMKGCCFDLSKEPQVGNRMK 180
TSGV V VQ+KLW+YWKA G+L+REKSENRALTRC QELRMKG CF+LSKEPQ+GNRMK
Sbjct: 121 TSGVFVIVVQLKLWMYWKARGQLQREKSENRALTRCAQELRMKGSCFNLSKEPQIGNRMK 180
Query: 181 SSSVEIKWGALTFLFR--IPISLLCFSGLVFTASNFILCGF 219
SSSVEIKWG LT+ R I ISLL FS +VF AS FILCGF
Sbjct: 181 SSSVEIKWGPLTWFSRNFIAISLLGFSAIVFAASKFILCGF 217
BLAST of Sed0011072 vs. NCBI nr
Match:
KAG7015562.1 (hypothetical protein SDJN02_23198, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 325.5 bits (833), Expect = 3.6e-85
Identity = 165/219 (75.34%), Postives = 186/219 (84.93%), Query Frame = 0
Query: 3 ETKDS--SGHIVEIPVEQDNYQNQNQKLMMITVIQQHPLRQISESSGHLLLLKLWQRDEH 62
ETKDS + H+VEIP E NQN +MI+VI+QHPLRQISESSGHLLLLKLWQR+EH
Sbjct: 4 ETKDSGAAAHVVEIPAE-----NQN---VMISVIEQHPLRQISESSGHLLLLKLWQREEH 63
Query: 63 RFGLRIGFQETKLESLKQQIFQLCCYFFLFHALALTTLFTCSDPNACHKWWAPAVSVGGT 122
FGLRIG +ETKLESLKQQIFQLCCYFFLFHAL+LT LFT SDPN CHKWW P V++G T
Sbjct: 64 LFGLRIGRRETKLESLKQQIFQLCCYFFLFHALSLTLLFTSSDPNVCHKWWVPGVAMGAT 123
Query: 123 SGVMVAAVQVKLWVYWKAAGELEREKSENRALTRCVQELRMKGCCFDLSKEPQVGNRMKS 182
SGV V VQ+KLW+YWKA+ +L+REKSENRALTRCVQELRMKG CF+LSKEPQ+G+RMKS
Sbjct: 124 SGVFVIVVQLKLWLYWKASAQLQREKSENRALTRCVQELRMKGSCFNLSKEPQIGHRMKS 183
Query: 183 SSVEIKWGALTFLFR--IPISLLCFSGLVFTASNFILCG 218
SSVEIKWG LT+L R + I LLCFSG+VF AS FILCG
Sbjct: 184 SSVEIKWGPLTWLSRNFVTIFLLCFSGIVFGASKFILCG 214
BLAST of Sed0011072 vs. NCBI nr
Match:
XP_022932317.1 (uncharacterized protein LOC111438709 [Cucurbita moschata])
HSP 1 Score: 325.1 bits (832), Expect = 4.6e-85
Identity = 165/219 (75.34%), Postives = 185/219 (84.47%), Query Frame = 0
Query: 3 ETKDS--SGHIVEIPVEQDNYQNQNQKLMMITVIQQHPLRQISESSGHLLLLKLWQRDEH 62
ETKDS + H+VEIP E NQN +MI+VI+QHPLRQISESSGHLLLLKLWQR+EH
Sbjct: 4 ETKDSGAAAHVVEIPAE-----NQN---VMISVIEQHPLRQISESSGHLLLLKLWQREEH 63
Query: 63 RFGLRIGFQETKLESLKQQIFQLCCYFFLFHALALTTLFTCSDPNACHKWWAPAVSVGGT 122
FGLRIG +ETKLESLKQQIFQLCCYFFLFHAL+LT LFT SDPN CHKWW P V++G T
Sbjct: 64 LFGLRIGRRETKLESLKQQIFQLCCYFFLFHALSLTLLFTSSDPNVCHKWWVPGVAMGAT 123
Query: 123 SGVMVAAVQVKLWVYWKAAGELEREKSENRALTRCVQELRMKGCCFDLSKEPQVGNRMKS 182
SGV V VQ+KLW+YWKA+ +L+REKSENRALTRCVQELRMKG CF+LSKEPQ+G+RMKS
Sbjct: 124 SGVFVIVVQLKLWLYWKASAQLQREKSENRALTRCVQELRMKGSCFNLSKEPQIGHRMKS 183
Query: 183 SSVEIKWGALTFLFR--IPISLLCFSGLVFTASNFILCG 218
SSVEIKWG LT L R + I LLCFSG+VF AS FILCG
Sbjct: 184 SSVEIKWGPLTLLSRNFVTIVLLCFSGIVFGASKFILCG 214
BLAST of Sed0011072 vs. NCBI nr
Match:
XP_004149573.1 (uncharacterized protein LOC101219596 [Cucumis sativus] >XP_011650492.1 uncharacterized protein LOC101219596 [Cucumis sativus] >KGN56048.1 hypothetical protein Csa_010603 [Cucumis sativus])
HSP 1 Score: 323.9 bits (829), Expect = 1.0e-84
Identity = 165/221 (74.66%), Postives = 187/221 (84.62%), Query Frame = 0
Query: 1 MAETKDS-SGHIVEIPVEQDNYQNQNQKLMMITVIQQHPLRQISESSGHLLLLKLWQRDE 60
MAETKDS + HIVEIPVEQ+N+ QN +MI+VIQ HPLRQISESSGHLLLLKLWQRDE
Sbjct: 1 MAETKDSTAAHIVEIPVEQENH-TQN---LMISVIQHHPLRQISESSGHLLLLKLWQRDE 60
Query: 61 HRFGLRIGFQETKLESLKQQIFQLCCYFFLFHALALTTLFTCSDPNACHKWWAPAVSVGG 120
H FGLRIG +ETK+ESLKQQIFQLCC+FFLFHAL+LT L+T SDP C KWW PAV +G
Sbjct: 61 HLFGLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVVIGA 120
Query: 121 TSGVMVAAVQVKLWVYWKAAGELEREKSENRALTRCVQELRMKGCCFDLSKEPQVGNRMK 180
TSGV V VQ+KLW+YWKA G+L++EK+ENRALTRCVQELRMKG CF+LSKEPQ+GNRMK
Sbjct: 121 TSGVFVIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQIGNRMK 180
Query: 181 SSSVEIKWGALTFLFR--IPISLLCFSGLVFTASNFILCGF 219
SSSVEIKWG LT+ R I ISLL FS ++F S FILCGF
Sbjct: 181 SSSVEIKWGPLTWFSRNFITISLLGFSAIIFVTSKFILCGF 217
BLAST of Sed0011072 vs. ExPASy TrEMBL
Match:
A0A1S3BL81 (uncharacterized protein LOC103491049 OS=Cucumis melo OX=3656 GN=LOC103491049 PE=4 SV=1)
HSP 1 Score: 325.5 bits (833), Expect = 1.7e-85
Identity = 167/221 (75.57%), Postives = 187/221 (84.62%), Query Frame = 0
Query: 1 MAETKDS-SGHIVEIPVEQDNYQNQNQKLMMITVIQQHPLRQISESSGHLLLLKLWQRDE 60
MA+TKDS + HIVEIPVEQ+N+ QN +MI+VIQ HPLRQISESSGHLLLLKLWQRDE
Sbjct: 1 MAQTKDSTAAHIVEIPVEQENH-TQN---LMISVIQHHPLRQISESSGHLLLLKLWQRDE 60
Query: 61 HRFGLRIGFQETKLESLKQQIFQLCCYFFLFHALALTTLFTCSDPNACHKWWAPAVSVGG 120
H FGLRIG +ETK+ESLKQQIFQLCC+FFLFHAL+LT L+T SDP C KWW PAV +G
Sbjct: 61 HLFGLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVVIGA 120
Query: 121 TSGVMVAAVQVKLWVYWKAAGELEREKSENRALTRCVQELRMKGCCFDLSKEPQVGNRMK 180
TSGV V VQ+KLW+YWKA G+L+REKSENRALTRC QELRMKG CF+LSKEPQ+GNRMK
Sbjct: 121 TSGVFVIVVQLKLWMYWKARGQLQREKSENRALTRCAQELRMKGSCFNLSKEPQIGNRMK 180
Query: 181 SSSVEIKWGALTFLFR--IPISLLCFSGLVFTASNFILCGF 219
SSSVEIKWG LT+ R I ISLL FS +VF AS FILCGF
Sbjct: 181 SSSVEIKWGPLTWFSRNFIAISLLGFSAIVFAASKFILCGF 217
BLAST of Sed0011072 vs. ExPASy TrEMBL
Match:
A0A6J1EWB5 (uncharacterized protein LOC111438709 OS=Cucurbita moschata OX=3662 GN=LOC111438709 PE=4 SV=1)
HSP 1 Score: 325.1 bits (832), Expect = 2.2e-85
Identity = 165/219 (75.34%), Postives = 185/219 (84.47%), Query Frame = 0
Query: 3 ETKDS--SGHIVEIPVEQDNYQNQNQKLMMITVIQQHPLRQISESSGHLLLLKLWQRDEH 62
ETKDS + H+VEIP E NQN +MI+VI+QHPLRQISESSGHLLLLKLWQR+EH
Sbjct: 4 ETKDSGAAAHVVEIPAE-----NQN---VMISVIEQHPLRQISESSGHLLLLKLWQREEH 63
Query: 63 RFGLRIGFQETKLESLKQQIFQLCCYFFLFHALALTTLFTCSDPNACHKWWAPAVSVGGT 122
FGLRIG +ETKLESLKQQIFQLCCYFFLFHAL+LT LFT SDPN CHKWW P V++G T
Sbjct: 64 LFGLRIGRRETKLESLKQQIFQLCCYFFLFHALSLTLLFTSSDPNVCHKWWVPGVAMGAT 123
Query: 123 SGVMVAAVQVKLWVYWKAAGELEREKSENRALTRCVQELRMKGCCFDLSKEPQVGNRMKS 182
SGV V VQ+KLW+YWKA+ +L+REKSENRALTRCVQELRMKG CF+LSKEPQ+G+RMKS
Sbjct: 124 SGVFVIVVQLKLWLYWKASAQLQREKSENRALTRCVQELRMKGSCFNLSKEPQIGHRMKS 183
Query: 183 SSVEIKWGALTFLFR--IPISLLCFSGLVFTASNFILCG 218
SSVEIKWG LT L R + I LLCFSG+VF AS FILCG
Sbjct: 184 SSVEIKWGPLTLLSRNFVTIVLLCFSGIVFGASKFILCG 214
BLAST of Sed0011072 vs. ExPASy TrEMBL
Match:
A0A0A0L2U7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G061020 PE=4 SV=1)
HSP 1 Score: 323.9 bits (829), Expect = 5.0e-85
Identity = 165/221 (74.66%), Postives = 187/221 (84.62%), Query Frame = 0
Query: 1 MAETKDS-SGHIVEIPVEQDNYQNQNQKLMMITVIQQHPLRQISESSGHLLLLKLWQRDE 60
MAETKDS + HIVEIPVEQ+N+ QN +MI+VIQ HPLRQISESSGHLLLLKLWQRDE
Sbjct: 1 MAETKDSTAAHIVEIPVEQENH-TQN---LMISVIQHHPLRQISESSGHLLLLKLWQRDE 60
Query: 61 HRFGLRIGFQETKLESLKQQIFQLCCYFFLFHALALTTLFTCSDPNACHKWWAPAVSVGG 120
H FGLRIG +ETK+ESLKQQIFQLCC+FFLFHAL+LT L+T SDP C KWW PAV +G
Sbjct: 61 HLFGLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVVIGA 120
Query: 121 TSGVMVAAVQVKLWVYWKAAGELEREKSENRALTRCVQELRMKGCCFDLSKEPQVGNRMK 180
TSGV V VQ+KLW+YWKA G+L++EK+ENRALTRCVQELRMKG CF+LSKEPQ+GNRMK
Sbjct: 121 TSGVFVIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQIGNRMK 180
Query: 181 SSSVEIKWGALTFLFR--IPISLLCFSGLVFTASNFILCGF 219
SSSVEIKWG LT+ R I ISLL FS ++F S FILCGF
Sbjct: 181 SSSVEIKWGPLTWFSRNFITISLLGFSAIIFVTSKFILCGF 217
BLAST of Sed0011072 vs. ExPASy TrEMBL
Match:
A0A6J1HN07 (uncharacterized protein LOC111465114 OS=Cucurbita maxima OX=3661 GN=LOC111465114 PE=4 SV=1)
HSP 1 Score: 321.6 bits (823), Expect = 2.5e-84
Identity = 165/219 (75.34%), Postives = 184/219 (84.02%), Query Frame = 0
Query: 3 ETKDSSG--HIVEIPVEQDNYQNQNQKLMMITVIQQHPLRQISESSGHLLLLKLWQRDEH 62
ETKDS HIVEIP E NQN +MI+VI+QHPLRQISESSGHLLLLKLWQR+EH
Sbjct: 4 ETKDSGAATHIVEIPAE-----NQN---IMISVIEQHPLRQISESSGHLLLLKLWQREEH 63
Query: 63 RFGLRIGFQETKLESLKQQIFQLCCYFFLFHALALTTLFTCSDPNACHKWWAPAVSVGGT 122
FGLRIG +ETKLESLKQQIFQLCCYFFLFHAL+LT LFT SDPN CHKWW P V++G T
Sbjct: 64 LFGLRIGRRETKLESLKQQIFQLCCYFFLFHALSLTLLFTSSDPNVCHKWWVPGVAMGAT 123
Query: 123 SGVMVAAVQVKLWVYWKAAGELEREKSENRALTRCVQELRMKGCCFDLSKEPQVGNRMKS 182
SGV V VQ+KLW+YWKA+ +L+REKSENRALTR VQELRMKG CF+LSKEPQ+G+RMKS
Sbjct: 124 SGVFVIVVQLKLWLYWKASAQLQREKSENRALTRIVQELRMKGSCFNLSKEPQIGHRMKS 183
Query: 183 SSVEIKWGALTFLFR--IPISLLCFSGLVFTASNFILCG 218
SSVEIKWG LT+L R + I LLCFSG+VF AS FILCG
Sbjct: 184 SSVEIKWGPLTWLSRNFVTIFLLCFSGIVFGASKFILCG 214
BLAST of Sed0011072 vs. ExPASy TrEMBL
Match:
A0A2P6QLA8 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0074881 PE=4 SV=1)
HSP 1 Score: 248.8 bits (634), Expect = 2.0e-62
Identity = 124/221 (56.11%), Postives = 160/221 (72.40%), Query Frame = 0
Query: 1 MAETKDSSGHIVEIPVEQDNYQNQNQKLMMITVIQQHPLRQISESSGHLLLLKLWQRDEH 60
MAE KD H+VEIPV++++ Q + + +I+ IQ HPL +ISES GHLLLLKLW+R+E
Sbjct: 1 MAEMKDCHHHVVEIPVDEEHQQKLSSSMTIISAIQHHPLMEISESPGHLLLLKLWRREED 60
Query: 61 RFGLRIGFQETKLESLKQQIFQLCCYFFLFHALALTTLFTC---SDPNACHKWWAPAVSV 120
FG RI +ET+++ ++++IFQLCC+F +FHA LT LFT S+ +C KWW P++
Sbjct: 61 LFGRRIARRETRMDLIRREIFQLCCFFLIFHAFFLTILFTSSVNSEKGSCQKWWIPSILS 120
Query: 121 GGTSGVMVAAVQVKLWVYWKAAGELEREKSENRALTRCVQELRMKGCCFDLSKEPQVGNR 180
TS V V VQV LW YWK G+L+REK ENRAL RC+QELRMKG FDLSKEPQ G R
Sbjct: 121 VSTSVVFVVLVQVNLWRYWKVWGQLQREKIENRALVRCIQELRMKGASFDLSKEPQSGKR 180
Query: 181 MKSSSVEIKWGALTFLFR--IPISLLCFSGLVFTASNFILC 217
+KSSSVEIKW +T+ + I I L+CF+GLVF AS +LC
Sbjct: 181 LKSSSVEIKWKPITWCSQNLITICLVCFAGLVFPASKLMLC 221
BLAST of Sed0011072 vs. TAIR 10
Match:
AT5G56120.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12870.1); Has 77 Blast hits to 75 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 223.0 bits (567), Expect = 2.3e-58
Identity = 125/238 (52.52%), Postives = 161/238 (67.65%), Query Frame = 0
Query: 1 MAETKDSSGHIVEIPVEQDNYQNQNQKLM---------MITVIQQHPLRQISESSGHLLL 60
MA TKDS H+VEIPV++++ + Q Q+ + ++ VIQQHPL +ISES GHLLL
Sbjct: 1 MAGTKDS--HVVEIPVDEEHKERQQQQQLVAVSNPGMGILKVIQQHPLSEISESPGHLLL 60
Query: 61 LKLWQRDEHRFGLRIGFQETKLESLKQQIFQLCCYFFLFHALALTTLF--TCSD------ 120
LKLWQR+E F R+ +E++LES+K++IFQLCC+F +FH T ++ +CSD
Sbjct: 61 LKLWQREEDLFCRRVLLKESRLESIKREIFQLCCFFLVFHGFFFTLVYSSSCSDDADVVK 120
Query: 121 PNA-CHKWWAPAVSVGGTSGVMVAAVQVKLWVYWKAAGELEREKSENRALTRCVQELRMK 180
NA C KWW P+ TS V+V VQ KL+V+WK + RE+++NR LTRCV ELRMK
Sbjct: 121 SNAVCKKWWIPSAVSLATSLVLVFLVQAKLFVFWKVYRGVNRERNDNRTLTRCVLELRMK 180
Query: 181 GCCFDLSKEPQVGNRMKSSSVEIKWGALTFL--FRIPISLLCFSGLVFTASNFILCGF 219
G FDLSKEP G RMKSSSVEIKW +T+ + I I LLC +GL F S FILCGF
Sbjct: 181 GSSFDLSKEPMSGKRMKSSSVEIKWKPVTWFSQYLITIVLLCSAGLFFPVSKFILCGF 236
BLAST of Sed0011072 vs. TAIR 10
Match:
AT3G12870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G56120.1); Has 70 Blast hits to 70 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 104.0 bits (258), Expect = 1.6e-22
Identity = 69/192 (35.94%), Postives = 104/192 (54.17%), Query Frame = 0
Query: 36 QHPLRQISESSGHLLLLKLWQRDEHRFGLRIGFQETKLESLKQQIFQLCCYFFLFHALAL 95
+HPL QI+++ H LLLK W ++E R+ +E++++S++++I QL +FFLFH+++L
Sbjct: 17 RHPLHQIADTPTHKLLLKQWLKEEELILSRVSHKESQIDSVRREITQLYIFFFLFHSISL 76
Query: 96 TTLFTCS-------DPNACHKWWAPAVSVGGTSGVMVAAVQVKLWVYWKAAGELEREKSE 155
LF S +AC + W P++ +S ++ AV+ K V LEREK +
Sbjct: 77 LLLFHASSSSSSSASSSACKRSWIPSLCALLSSLGIIWAVRYKSEVESHLEKLLEREKED 136
Query: 156 NRALTRCVQELRMKGCCFDLSKEPQVGNRMKSSSVEI----KWGALTFLFRIPISLLCFS 215
+ L +CV+EL+ KG FDL KE R KS VE KW A F+ S+ C
Sbjct: 137 AKLLRKCVEELKKKGIEFDLLKEVDALRRAKSLRVESKPVKKWSARDFVTLFFFSVSC-- 196
Query: 216 GLVFTASNFILC 217
LV ILC
Sbjct: 197 -LVLAMIRLILC 205
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038905570.1 | 1.0e-87 | 76.47 | uncharacterized protein LOC120091553 [Benincasa hispida] >XP_038905571.1 unchara... | [more] |
XP_008449068.1 | 3.6e-85 | 75.57 | PREDICTED: uncharacterized protein LOC103491049 [Cucumis melo] >XP_008449069.1 P... | [more] |
KAG7015562.1 | 3.6e-85 | 75.34 | hypothetical protein SDJN02_23198, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_022932317.1 | 4.6e-85 | 75.34 | uncharacterized protein LOC111438709 [Cucurbita moschata] | [more] |
XP_004149573.1 | 1.0e-84 | 74.66 | uncharacterized protein LOC101219596 [Cucumis sativus] >XP_011650492.1 uncharact... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S3BL81 | 1.7e-85 | 75.57 | uncharacterized protein LOC103491049 OS=Cucumis melo OX=3656 GN=LOC103491049 PE=... | [more] |
A0A6J1EWB5 | 2.2e-85 | 75.34 | uncharacterized protein LOC111438709 OS=Cucurbita moschata OX=3662 GN=LOC1114387... | [more] |
A0A0A0L2U7 | 5.0e-85 | 74.66 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G061020 PE=4 SV=1 | [more] |
A0A6J1HN07 | 2.5e-84 | 75.34 | uncharacterized protein LOC111465114 OS=Cucurbita maxima OX=3661 GN=LOC111465114... | [more] |
A0A2P6QLA8 | 2.0e-62 | 56.11 | Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0074881 PE=4... | [more] |
Match Name | E-value | Identity | Description | |
AT5G56120.1 | 2.3e-58 | 52.52 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT3G12870.1 | 1.6e-22 | 35.94 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |