Sed0010917 (gene) Chayote v1

Overview


Name	Sed0010917
Type	gene
Organism	Sechium edule (Chayote v1)
Description	40S ribosomal protein S8
Location	LG03: 2496784 .. 2498984 (-)
RNA-Seq Expression	Sed0010917
Synteny	Sed0010917

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGCCTTCTGCTGTGCCCATCCTCACCGCCGCCGTCTTCCGATCGGCCGCTGCCGCTGCCGCAACGGTGAGTATTTAACCTCCATTATTCTATGCTTCATCTACATCTCTTTCTACATCATCAGCTTTCATGTTTTTTATCTCTCTATTTTTCTTTCTTTCACGTTTGTATTTGAAGGTTTAGGCTTAGGGTTTGAGCGCCGTTTGCTGTTTCTGTAATTTTTGTTTCGTAGGTTGCATCAGGAACTTTAGGACTCCGCTTAGGGCAGGAGCTCACGTCTCGTCAAGATGGGTATGTTGCAAACAGATTTTCAGTTTGTTCTACATGTCTTCATTTTTGTGGTTTTTTTTTTCTTTTTGTTAATTTTTGAAGGATTTGTGGATAGGTATTTCTCGTGATTCTATGCACAAGAGGCGCGCAACCGGAGGCAAGAAGAAGGCGTGGAGGAAGAAGAGAAAGTAACTTTCTTTGCTCGTATTTTATTCAGTGCATTTTGATTAACCCATTTTCCTGAATACAGAATGCTAATTTTGTATGTTTAGCTAGAACGATGCTTTTTTTTCTTGGATAGTAGTGTACTGGTTGTATTATTTTAAAGGATTTGCCGTTTGTTATCTTTTCCAGTTCAGAATTCAAGCATTTTAATTAATCTGCTTATGTATTTTAATTTTTCTAATTGATTGGTGTTTCCTTTGACTTAATTAATTACAAGTCGCTTATAGCATGCCTCACATTTTCTTGTTAATAAATTACAAGTCTCTTCCAATATTTTGTGTTATGGACCTTGTGGCATATTTTATGTATATAGTTTTTTATGCCCAAGTAGATATATAATCTTCTTGCCATATAGTTTTGAGGTGAGTTCTTGTTACTGAAACTTCCACTATTCTTATGTCTCTCTTGTTAAGTGAAGATCCAATGTTCATGAGTCACATGCCGTGTGCTGTTTTTTTTGTATATTTTTTTTAATTCTCAAGTGGTATCATTTCTTTGTAAAGGTATGAGCTTGGAAGGCAACCTGCCAACACTAAGATATCAAGTGACAAGTCTGTCAGGAGGATTAGAGTTCGTGGGGGCAATGTGAAGTGGCGTGCTTTTAGGCTTGATACTGGTAACTACTCATGGGGTAGTGAGGCTGTGACTAGGAAAACCCGTATACTAGACGTGGTGTACAATGCATCAAACAATGAGCTTGTCCGTACCCAAACTTTGGTGAAGAGTGCCATTGTTCAGGTTGATGCTGCACCATTTAAGCAGTGGTATCTTCAGCACTATGGAGTTGATATTGGAAGGAAGAAGAAGACCGCCGCTGTTGCCAAGAAGGAAGAGGTAGACAAGCTTAATTGGATATAATGTTTGATTTTGAATTCGAATACAAGTTTTAATGTGTTAAAATTAATTGATGGACAGTGATAATGGCCTGAGGCATGATCTATAAGACAATTTGATTTTTATGGTTGATAGGAAGGTGATGCTGCTGCCGCCACCGAGGAAGTGAAGAAGAGTAACCACGTGCAGCGCAAGATTGAGAAGCGTCAACAGGATCGTAAACTTGATGCACATATTGAAGAGCAATTCAGCAGTGGTCGTTTGATGGCTTGTATCTCATCAAGACCAGGTCAATGTGGCCGAGCAGATGGGTAAGCAGTTTGAAATCCTCAATGATTCTGATTTTTCACTTATTTTCTAACATTCACTAAAGGATTTTTAAGTAATTTTGCCGAGGTTTTGCTAATTTTTTGCAGATATATCTTGGAGGGCAAAGAACTTGAGTTCTACATGAAGAAGCTCCAGAGAAAGAAGGGAAAAGGTGCTGGTGCTGCATAAGTAGTTTGTCGTTGAGATATTTTCTGGCTGTATTTCCTTTTCTATGATTCTATCTTCCTTTTTTGACTTATGAAGACCATAAGTTGTTGCAGCTAAGATAAAACATTTATTTATGAACTTCAATTTTGCTGGTATTAGTTGTTTAATTAAAATACTTACTTTAGTTCGTTTCTTGATTAGACCAGTTTGCTTATTAGCCTTATAGTTTTCAAGTTCTCAACCTCTTGTGCTTGCTGTTCTAGTTTGGTCTGTTTTGGATGATTGACAATTTTAACCCATCTTGTTCCAATCGATAGCGCCGGACCGGTTTGTATCCCTCATCTTTTTGTTGTTAGGCATCATGCTACCTTCTATTTGCTATATAGACTGACTG

mRNA sequence

ATTGCCTTCTGCTGTGCCCATCCTCACCGCCGCCGTCTTCCGATCGGCCGCTGCCGCTGCCGCAACGGTTGCATCAGGAACTTTAGGACTCCGCTTAGGGCAGGAGCTCACGTCTCGTCAAGATGGGTATTTCTCGTGATTCTATGCACAAGAGGCGCGCAACCGGAGGCAAGAAGAAGGCGTGGAGGAAGAAGAGAAAGTATGAGCTTGGAAGGCAACCTGCCAACACTAAGATATCAAGTGACAAGTCTGTCAGGAGGATTAGAGTTCGTGGGGGCAATGTGAAGTGGCGTGCTTTTAGGCTTGATACTGGTAACTACTCATGGGGTAGTGAGGCTGTGACTAGGAAAACCCGTATACTAGACGTGGTGTACAATGCATCAAACAATGAGCTTGTCCGTACCCAAACTTTGGTGAAGAGTGCCATTGTTCAGGTTGATGCTGCACCATTTAAGCAGTGGTATCTTCAGCACTATGGAGTTGATATTGGAAGGAAGAAGAAGACCGCCGCTGTTGCCAAGAAGGAAGAGGAAGGTGATGCTGCTGCCGCCACCGAGGAAGTGAAGAAGAGTAACCACGTGCAGCGCAAGATTGAGAAGCGTCAACAGGATCGTAAACTTGATGCACATATTGAAGAGCAATTCAGCAGTGGTCGTTTGATGGCTTGTATCTCATCAAGACCAGGTCAATGTGGCCGAGCAGATGGATATATCTTGGAGGGCAAAGAACTTGAGTTCTACATGAAGAAGCTCCAGAGAAAGAAGGGAAAAGGTGCTGGTGCTGCATAAGTAGTTTGTCGTTGAGATATTTTCTGGCTGTATTTCCTTTTCTATGATTCTATCTTCCTTTTTTGACTTATGAAGACCATAAGTTGTTGCAGCTAAGATAAAACATTTATTTATGAACTTCAATTTTGCTGGTATTAGTTGTTTAATTAAAATACTTACTTTAGTTCGTTTCTTGATTAGACCAGTTTGCTTATTAGCCTTATAGTTTTCAAGTTCTCAACCTCTTGTGCTTGCTGTTCTAGTTTGGTCTGTTTTGGATGATTGACAATTTTAACCCATCTTGTTCCAATCGATAGCGCCGGACCGGTTTGTATCCCTCATCTTTTTGTTGTTAGGCATCATGCTACCTTCTATTTGCTATATAGACTGACTG

Coding sequence (CDS)

ATGGGTATTTCTCGTGATTCTATGCACAAGAGGCGCGCAACCGGAGGCAAGAAGAAGGCGTGGAGGAAGAAGAGAAAGTATGAGCTTGGAAGGCAACCTGCCAACACTAAGATATCAAGTGACAAGTCTGTCAGGAGGATTAGAGTTCGTGGGGGCAATGTGAAGTGGCGTGCTTTTAGGCTTGATACTGGTAACTACTCATGGGGTAGTGAGGCTGTGACTAGGAAAACCCGTATACTAGACGTGGTGTACAATGCATCAAACAATGAGCTTGTCCGTACCCAAACTTTGGTGAAGAGTGCCATTGTTCAGGTTGATGCTGCACCATTTAAGCAGTGGTATCTTCAGCACTATGGAGTTGATATTGGAAGGAAGAAGAAGACCGCCGCTGTTGCCAAGAAGGAAGAGGAAGGTGATGCTGCTGCCGCCACCGAGGAAGTGAAGAAGAGTAACCACGTGCAGCGCAAGATTGAGAAGCGTCAACAGGATCGTAAACTTGATGCACATATTGAAGAGCAATTCAGCAGTGGTCGTTTGATGGCTTGTATCTCATCAAGACCAGGTCAATGTGGCCGAGCAGATGGATATATCTTGGAGGGCAAAGAACTTGAGTTCTACATGAAGAAGCTCCAGAGAAAGAAGGGAAAAGGTGCTGGTGCTGCATAA

Protein sequence

MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTAAVAKKEEEGDAAAATEEVKKSNHVQRKIEKRQQDRKLDAHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA

Homology

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BLAST of Sed0010917 vs. NCBI nr
Match: KAG6578955.1 (40S ribosomal protein S8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 421.8 bits (1083), Expect = 3.7e-114
Identity = 215/221 (97.29%), Postives = 219/221 (99.10%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKS+RRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTAAVAKKEEEGDAAAATEEVKKSNHVQRKIEKRQQDRKLDAHIEEQFSSGRLM 180
           DIGRKKKTAA AKKEE+GDAAAATEEVKKSNHVQRK+EKRQQ+RKLD HIEEQFSSGRLM
Sbjct: 121 DIGRKKKTAASAKKEEDGDAAAATEEVKKSNHVQRKLEKRQQERKLDPHIEEQFSSGRLM 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 221

[Close]

BLAST of Sed0010917 vs. NCBI nr
Match: XP_022939829.1 (40S ribosomal protein S8 [Cucurbita moschata] >XP_022993929.1 40S ribosomal protein S8 [Cucurbita maxima])

HSP 1 Score: 421.4 bits (1082), Expect = 4.8e-114
Identity = 215/221 (97.29%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKS+RRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTAAVAKKEEEGDAAAATEEVKKSNHVQRKIEKRQQDRKLDAHIEEQFSSGRLM 180
           DIGRKKKTAA AKKEEEGDAAAATEE KKSNHVQRK+EKRQQ+RKLD HIEEQFSSGRLM
Sbjct: 121 DIGRKKKTAASAKKEEEGDAAAATEEAKKSNHVQRKLEKRQQERKLDPHIEEQFSSGRLM 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 221

[Close]

BLAST of Sed0010917 vs. NCBI nr
Match: XP_022957602.1 (40S ribosomal protein S8-like [Cucurbita moschata] >XP_022989999.1 40S ribosomal protein S8-like [Cucurbita maxima] >XP_023515358.1 40S ribosomal protein S8-like [Cucurbita pepo subsp. pepo] >KAG6602108.1 40S ribosomal protein S8, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032811.1 40S ribosomal protein S8 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 418.7 bits (1075), Expect = 3.1e-113
Identity = 213/221 (96.38%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKS+RRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTAAVAKKEEEGDAAAATEEVKKSNHVQRKIEKRQQDRKLDAHIEEQFSSGRLM 180
           DIGRKKKT+A AKKEEEG+AAAA EE+KKSNHVQRK+EKRQQDRKLD HIEEQFSSGRLM
Sbjct: 121 DIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLM 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 221

[Close]

BLAST of Sed0010917 vs. NCBI nr
Match: XP_023550698.1 (40S ribosomal protein S8 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 416.0 bits (1068), Expect = 2.0e-112
Identity = 215/224 (95.98%), Postives = 218/224 (97.32%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKS+RRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTAAVAKKEEEGD---AAAATEEVKKSNHVQRKIEKRQQDRKLDAHIEEQFSSG 180
           DIGRKKKTAA AKKEEEGD   AAAATEE KKSNHVQRK+EKRQQ+RKLD HIEEQFSSG
Sbjct: 121 DIGRKKKTAASAKKEEEGDAAAAAAATEEAKKSNHVQRKLEKRQQERKLDPHIEEQFSSG 180

Query: 181 RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 224

[Close]

BLAST of Sed0010917 vs. NCBI nr
Match: XP_022929761.1 (40S ribosomal protein S8-like [Cucurbita moschata] >XP_022929762.1 40S ribosomal protein S8-like [Cucurbita moschata] >XP_022997461.1 40S ribosomal protein S8-like [Cucurbita maxima] >XP_022997462.1 40S ribosomal protein S8-like [Cucurbita maxima] >XP_023547179.1 40S ribosomal protein S8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 412.1 bits (1058), Expect = 2.9e-111
Identity = 213/221 (96.38%), Postives = 215/221 (97.29%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKS+RRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRK+RILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTAAVAKKEEEGDAAAATEEVKKSNHVQRKIEKRQQDRKLDAHIEEQFSSGRLM 180
           DIGRKKKT A AKKEEEGD  A TEEVKKSNHVQRKIEKRQQDRKLD HIEEQFSSGRLM
Sbjct: 121 DIGRKKKTVASAKKEEEGD--APTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLM 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Sed0010917 vs. ExPASy Swiss-Prot
Match: P49199 (40S ribosomal protein S8 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS8 PE=2 SV=2)

HSP 1 Score: 381.7 bits (979), Expect = 5.6e-105
Identity = 195/220 (88.64%), Postives = 202/220 (91.82%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGK+KAWRKKRKYELGRQPANTK+SS+K+VRR+RVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 121 DIGRKKKTAAVAKKEEEGDAAAATEEVKKSNHVQRKIEKRQQDRKLDAHIEEQFSSGRLM 180
           DIGRKKK  A  K  E  DA A TEE KKSNHV RK+EKRQQ R LDAHIEEQF SGRL+
Sbjct: 121 DIGRKKKAPAAKKDAEGQDAEATTEEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRLL 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA 221
           ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA A
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGASA 220

[Close]

BLAST of Sed0010917 vs. ExPASy Swiss-Prot
Match: O81361 (40S ribosomal protein S8 OS=Prunus armeniaca OX=36596 GN=RPS8 PE=2 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 6.8e-103
Identity = 193/221 (87.33%), Postives = 205/221 (92.76%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SS+K+VRRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTAAVAKKEEEGDAAAATEEVKKSNHVQRKIEKRQQDRKLDAHIEEQFSSGRLM 180
           +IGRKKKTAA AKK+   +  A TEE KKSNHV  K+EKRQQ R LDAHIEEQF  G+L+
Sbjct: 121 EIGRKKKTAA-AKKDTPEEGEATTEEAKKSNHVAIKLEKRQQGRTLDAHIEEQFGGGKLL 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           ACISSRPGQCG+ADG ILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ACISSRPGQCGKADGDILEGKELEFYMKKLQRKKGKGAGAA 220

[Close]

BLAST of Sed0010917 vs. ExPASy Swiss-Prot
Match: Q08069 (40S ribosomal protein S8 OS=Zea mays OX=4577 GN=RPS8 PE=2 SV=2)

HSP 1 Score: 371.7 bits (953), Expect = 5.8e-102
Identity = 191/221 (86.43%), Postives = 201/221 (90.95%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGK+KAWRKKRKYELGRQPANTK+SS+K+VRR+RVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 121 DIGRKKKTAAVAKKEEEG-DAAAATEEVKKSNHVQRKIEKRQQDRKLDAHIEEQFSSGRL 180
           DIGRKKKT A  K   EG +  AA EE KKSNHV RK+EKR++ R LD HIEEQF SGRL
Sbjct: 121 DIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGRL 180

Query: 181 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA 221
           +ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK A A
Sbjct: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAVA 221

[Close]

BLAST of Sed0010917 vs. ExPASy Swiss-Prot
Match: Q93VG5 (40S ribosomal protein S8-1 OS=Arabidopsis thaliana OX=3702 GN=RPS8A PE=1 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 6.0e-99
Identity = 183/221 (82.81%), Postives = 205/221 (92.76%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYE+GRQPANTK+SS+K+VRRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEA TRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120

Query: 121 DIGRKKKTAAVAKKE-EEGD--AAAATEEVKKSNHVQRKIEKRQQDRKLDAHIEEQFSSG 180
           ++GRKKK+A+  KK+ EEG+  A AA EEVKKSNH+ RKI  RQ+ R LD+HIE+QF+SG
Sbjct: 121 ELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASG 180

Query: 181 RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA 219
           RL+ACISSRPGQCGRADGYILEGKELEFYMKK+Q+KKGKGA
Sbjct: 181 RLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGA 221

[Close]

BLAST of Sed0010917 vs. ExPASy Swiss-Prot
Match: Q9FIF3 (40S ribosomal protein S8-2 OS=Arabidopsis thaliana OX=3702 GN=RPS8B PE=2 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 1.3e-98
Identity = 186/221 (84.16%), Postives = 199/221 (90.05%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYELGRQPANTK+SS+K+VRRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRKTRILDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120

Query: 121 DIGRKKKTAAVAKKEEEGDAAAATEEVKKSNHVQRKIEKRQQDRKLDAHIEEQFSSGRLM 180
           DIGRKKK  AV            TEEVKKSNHVQRK+E RQ+ R LD+H+EEQFSSGRL+
Sbjct: 121 DIGRKKKGEAV-----------TTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLL 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           ACI+SRPGQCGRADGYILEGKELEFYMKKLQ+KKGK AGAA
Sbjct: 181 ACIASRPGQCGRADGYILEGKELEFYMKKLQKKKGKNAGAA 210

[Close]

BLAST of Sed0010917 vs. ExPASy TrEMBL
Match: A0A6J1K1I2 (40S ribosomal protein S8 OS=Cucurbita maxima OX=3661 GN=LOC111489780 PE=3 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 2.3e-114
Identity = 215/221 (97.29%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKS+RRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTAAVAKKEEEGDAAAATEEVKKSNHVQRKIEKRQQDRKLDAHIEEQFSSGRLM 180
           DIGRKKKTAA AKKEEEGDAAAATEE KKSNHVQRK+EKRQQ+RKLD HIEEQFSSGRLM
Sbjct: 121 DIGRKKKTAASAKKEEEGDAAAATEEAKKSNHVQRKLEKRQQERKLDPHIEEQFSSGRLM 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 221

[Close]

BLAST of Sed0010917 vs. ExPASy TrEMBL
Match: A0A6J1FIB1 (40S ribosomal protein S8 OS=Cucurbita moschata OX=3662 GN=LOC111445587 PE=3 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 2.3e-114
Identity = 215/221 (97.29%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKS+RRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTAAVAKKEEEGDAAAATEEVKKSNHVQRKIEKRQQDRKLDAHIEEQFSSGRLM 180
           DIGRKKKTAA AKKEEEGDAAAATEE KKSNHVQRK+EKRQQ+RKLD HIEEQFSSGRLM
Sbjct: 121 DIGRKKKTAASAKKEEEGDAAAATEEAKKSNHVQRKLEKRQQERKLDPHIEEQFSSGRLM 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 221

[Close]

BLAST of Sed0010917 vs. ExPASy TrEMBL
Match: A0A6J1JQW0 (40S ribosomal protein S8 OS=Cucurbita maxima OX=3661 GN=LOC111487026 PE=3 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.5e-113
Identity = 213/221 (96.38%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKS+RRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTAAVAKKEEEGDAAAATEEVKKSNHVQRKIEKRQQDRKLDAHIEEQFSSGRLM 180
           DIGRKKKT+A AKKEEEG+AAAA EE+KKSNHVQRK+EKRQQDRKLD HIEEQFSSGRLM
Sbjct: 121 DIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLM 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 221

[Close]

BLAST of Sed0010917 vs. ExPASy TrEMBL
Match: A0A6J1GZK4 (40S ribosomal protein S8 OS=Cucurbita moschata OX=3662 GN=LOC111459010 PE=3 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.5e-113
Identity = 213/221 (96.38%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKS+RRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTAAVAKKEEEGDAAAATEEVKKSNHVQRKIEKRQQDRKLDAHIEEQFSSGRLM 180
           DIGRKKKT+A AKKEEEG+AAAA EE+KKSNHVQRK+EKRQQDRKLD HIEEQFSSGRLM
Sbjct: 121 DIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLM 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 221

[Close]

BLAST of Sed0010917 vs. ExPASy TrEMBL
Match: A0A6J1K537 (40S ribosomal protein S8 OS=Cucurbita maxima OX=3661 GN=LOC111492371 PE=3 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.4e-111
Identity = 213/221 (96.38%), Postives = 215/221 (97.29%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKS+RRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRK+RILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTAAVAKKEEEGDAAAATEEVKKSNHVQRKIEKRQQDRKLDAHIEEQFSSGRLM 180
           DIGRKKKT A AKKEEEGD  A TEEVKKSNHVQRKIEKRQQDRKLD HIEEQFSSGRLM
Sbjct: 121 DIGRKKKTVASAKKEEEGD--APTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLM 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Sed0010917 vs. TAIR 10
Match: AT5G20290.1 (Ribosomal protein S8e family protein )

HSP 1 Score: 361.7 bits (927), Expect = 4.2e-100
Identity = 183/221 (82.81%), Postives = 205/221 (92.76%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYE+GRQPANTK+SS+K+VRRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEA TRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120

Query: 121 DIGRKKKTAAVAKKE-EEGD--AAAATEEVKKSNHVQRKIEKRQQDRKLDAHIEEQFSSG 180
           ++GRKKK+A+  KK+ EEG+  A AA EEVKKSNH+ RKI  RQ+ R LD+HIE+QF+SG
Sbjct: 121 ELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASG 180

Query: 181 RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA 219
           RL+ACISSRPGQCGRADGYILEGKELEFYMKK+Q+KKGKGA
Sbjct: 181 RLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGA 221

[Close]

BLAST of Sed0010917 vs. TAIR 10
Match: AT5G59240.1 (Ribosomal protein S8e family protein )

HSP 1 Score: 360.5 bits (924), Expect = 9.4e-100
Identity = 186/221 (84.16%), Postives = 199/221 (90.05%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSVRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYELGRQPANTK+SS+K+VRRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRKTRILDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120

Query: 121 DIGRKKKTAAVAKKEEEGDAAAATEEVKKSNHVQRKIEKRQQDRKLDAHIEEQFSSGRLM 180
           DIGRKKK  AV            TEEVKKSNHVQRK+E RQ+ R LD+H+EEQFSSGRL+
Sbjct: 121 DIGRKKKGEAV-----------TTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLL 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           ACI+SRPGQCGRADGYILEGKELEFYMKKLQ+KKGK AGAA
Sbjct: 181 ACIASRPGQCGRADGYILEGKELEFYMKKLQKKKGKNAGAA 210

The following BLAST results are available for this feature:

BLAST of Sed0010917 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6578955.1	3.7e-114	97.29	40S ribosomal protein S8, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022939829.1	4.8e-114	97.29	40S ribosomal protein S8 [Cucurbita moschata] >XP_022993929.1 40S ribosomal prot...	[more]
XP_022957602.1	3.1e-113	96.38	40S ribosomal protein S8-like [Cucurbita moschata] >XP_022989999.1 40S ribosomal...	[more]
XP_023550698.1	2.0e-112	95.98	40S ribosomal protein S8 [Cucurbita pepo subsp. pepo]	[more]
XP_022929761.1	2.9e-111	96.38	40S ribosomal protein S8-like [Cucurbita moschata] >XP_022929762.1 40S ribosomal...	[more]

BLAST of Sed0010917 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49199	5.6e-105	88.64	40S ribosomal protein S8 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS8 PE=2 S...	[more]
O81361	6.8e-103	87.33	40S ribosomal protein S8 OS=Prunus armeniaca OX=36596 GN=RPS8 PE=2 SV=1	[more]
Q08069	5.8e-102	86.43	40S ribosomal protein S8 OS=Zea mays OX=4577 GN=RPS8 PE=2 SV=2	[more]
Q93VG5	6.0e-99	82.81	40S ribosomal protein S8-1 OS=Arabidopsis thaliana OX=3702 GN=RPS8A PE=1 SV=1	[more]
Q9FIF3	1.3e-98	84.16	40S ribosomal protein S8-2 OS=Arabidopsis thaliana OX=3702 GN=RPS8B PE=2 SV=1	[more]

BLAST of Sed0010917 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K1I2	2.3e-114	97.29	40S ribosomal protein S8 OS=Cucurbita maxima OX=3661 GN=LOC111489780 PE=3 SV=1	[more]
A0A6J1FIB1	2.3e-114	97.29	40S ribosomal protein S8 OS=Cucurbita moschata OX=3662 GN=LOC111445587 PE=3 SV=1	[more]
A0A6J1JQW0	1.5e-113	96.38	40S ribosomal protein S8 OS=Cucurbita maxima OX=3661 GN=LOC111487026 PE=3 SV=1	[more]
A0A6J1GZK4	1.5e-113	96.38	40S ribosomal protein S8 OS=Cucurbita moschata OX=3662 GN=LOC111459010 PE=3 SV=1	[more]
A0A6J1K537	1.4e-111	96.38	40S ribosomal protein S8 OS=Cucurbita maxima OX=3661 GN=LOC111492371 PE=3 SV=1	[more]

BLAST of Sed0010917 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20290.1	4.2e-100	82.81	Ribosomal protein S8e family protein	[more]
AT5G59240.1	9.4e-100	84.16	Ribosomal protein S8e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022309	Ribosomal protein S8e/ribosomal biogenesis NSA2	PFAM	PF01201	Ribosomal_S8e	coord: 1..198 e-value: 1.6E-55 score: 187.1
IPR001047	Ribosomal protein S8e	TIGRFAM	TIGR00307	TIGR00307	coord: 1..200 e-value: 1.8E-46 score: 155.4
IPR001047	Ribosomal protein S8e	PANTHER	PTHR10394	40S RIBOSOMAL PROTEIN S8	coord: 1..219
None	No IPR available	GENE3D	3.10.290.70		coord: 32..161 e-value: 8.6E-41 score: 140.8
None	No IPR available	GENE3D	3.10.290.70		coord: 162..214 e-value: 1.4E-20 score: 75.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..26
None	No IPR available	PANTHER	PTHR10394:SF18	40S RIBOSOMAL PROTEIN S8	coord: 1..219
None	No IPR available	CDD	cd11380	Ribosomal_S8e_like	coord: 5..198 e-value: 5.25813E-59 score: 180.408
IPR018283	Ribosomal protein S8e, conserved site	PROSITE	PS01193	RIBOSOMAL_S8E	coord: 11..30

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0010917.1	Sed0010917.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome