Sed0010644 (gene) Chayote v1

Overview
NameSed0010644
Typegene
OrganismSechium edule (Chayote v1)
DescriptionDUF4283 domain-containing protein
LocationLG04: 8434446 .. 8438421 (+)
RNA-Seq ExpressionSed0010644
SyntenySed0010644
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGCGGATCCTCCTCTTGTGAAAGATTCAAGCTCTACGACCCGTTGGAATTGCACGAATTTCGGGACAAGTTCGTTGTAAGGTCTGTACAATTTCCCATTATGTTTACATGTTAAATGATTTAATATAGTCGTGTTTGCTTCCTAAATCACTCTTTAAACGTTGTTCGAGTTAGCATTTCCTTGTTGGTTTGTTATTTGAATCACATTAAGTTTTAACCACTCTAGGTAGCCCAGAGGTCAAAAAGACCTTAAAAATTAAAAAGCTATGAGTTTAATCTATGGTGGTCACCTACCTAGGGATTAGTTATGTCTCGTAAGAATATTCGAAGTGCGCGCAAGCTGTCCTGAATACTTACATATATAAAAAAGAAAATATTCGAATCTTACTGATACTTGAATGCTGCAAATTCACCAGACACGATACAGATTGATTGACCTCATTTGTTTTGGTCATCTGCGTATTTTTTTTCTTAAAATTCATGGATGACAATAAAATTACAAATTCGGTAATCATTTTATGCCGGTTGGCCAGACTTGGAGTAATTTGAGTGCCTCGTTGTTACAGGTGATATTATATTGGTTTTCGAACTGCAGCAAAAGTCTCCCCAATCTATGGAGTGGCTGGGACAATAAGATTAGTTGCTGGTAATTGCTTGTGATGGATATTGGTACTTATGTTTGTGTGTTGTTAGTATGATTTCATTTTTATAATCCGTTTGGCTTGGAAAAGGAAACACATGATGCTACTTGCATTAGGATGATTTCATATCGTATCAACGACCATATTTAATCGGAAGTATTACGATTATAATTTTACGTGCTTGACTTCAGAATCTTGTTCAATAATTTTTTTCATGAACAAAAAACATGTGTAAAGTAGTTATCAGCTTCACTTGATCAGCAGCTGACATCTTTAGAAGCAAGAGCATGTGATATTTTGTTTCCTTCATGCTTTTGATTTTTCACGATGTTGTGCAGGAGTATACATGAAAAAAAGTAGGAAACTTCCTTGGTTTCTCTGTTTTTCAAGTAACGTCTATGAAGTTCCTCCCTTGTGATGAGGCTTTGAAGCTGCTTTCAGCTTCTCAAGAAGTAAGCTTATTCTCTTGAGCTTGGAAAGTAATTTCTTTCGTATCTCTTCTCGCGTGGTCAAGATCCCATTTAAATCCTTGCAATCGTTTCTTTTGAGCAGAAAAAAGATAAGCCTTATTTCCTGACTTTGTTGAAAACATTGGAAGCGACATCAGGGTTGTATTATTCATATAAAAAAGATATAACCTTGAAGTAAATGATATTCGAATCTAGGAGCCTTTTAAATATAGCATCTTTTATGGTTATCCTTATCATTATGGATTCATAGTTCTGCTTCAGACCTTTTCATCTCAAGATGCCTCCAATTTCTTATAATAGCTTACAGAGAAGGTGTAAGTTTGCTGAAGGATGGATTTGTTCCTTCATGTTATTGTCTTTGACTTTGATGCATTTGTTCTTTGTTCATCCGATGTTTAGTTTAGATTGTAAATTTTCAACTTTTATTTGATAATTGAATTAAATGCTTGTTATTTTCTCTATATGTCAGGCTGACCCTCGATTCATTTGGAACAAAAATCTTCTAGTTGAACTTATTGAGTTCAAGGTATATGCTGATAATCGTTCCAGGCTATGCTATATTGGAATGAATTATTCACAAGTTCTCTGTTCTCGCGACTTGTTAAATTGTTTGTTATTCTTTTTCTTGATGTAAATTATGGTTCTTCTTTGCAGCTTAATGAGTTCATCATTCCACTACTGCAAGGAAATATCCTAGATTTTTAATTCATATATTAATTTGGAGGATGTCTTGGCAACTATTTACAACTTTTCTCTTTTCGAAACATGTCTTGAGTTCTTCTAGGAGTTGTTCTCTAATATTTTCCTTCCGAAGCTGTAGTTCTGTGAATCAATAACTTCATCTATAAAATAGCCTTAACCTGTAGAAACATTTCCCAGACAAATGTGCAAGTATTATATATGCTTGAGGGAAGGTTTTAAAGAAAATGTAAATCTATTTGTCTTATTGGAGCCATATACATGAACAAAGCCTTGACAAAACTGTAAGCTTCCAGGCTGTACAGCTGAAGCTAAAAGAATCACCTGCTCAACTAACCTTAATTTCAAGTCGATGTACTTGTTGGCCAAGTACTTTTTACAGATATTGCTAATTTTTAAACAGGTTCTAGTTGTAAGAAAAAAAAATCAATTATTTTGAAAATGGTTATTGATTATCTAGGAATGCGAATGTGGAGAAGGGGAGCCAATCTTCAAGGCGACACAACCAATTTTATTGAAAACCAAGCAACTAGTAGAGCATGAGGGTTTCAAAGCTTCTCTGTTGGAGGTATTTTGCTTCTTGCAAAATTCAAACTTTGCTTTTACACTAGTTGAACTTGATTCGGGTCAGTGTTTTAAAAAGCCCCTTCAGGCGCGTGCCTAGCCCAAGGCGCACCTCATGCGCCTCGCCTGGGAAAGGCGAGGCATGCTTAATAAGGTGCGCGCCTTTTGGCGCCTTATGTGAAGCCACGGGCGCCAAAAGGCGCGCACCTTATGGGCTTTCATTTTCTTTGTATTTTTTTTCATGTTTTCACCTTTATCCTTTGTGAGATCCATGTACTAGGTCATTCAAAGCGCAAGATAACTGATTCAAGACATTTCAATACCTTAAACAACTTAATTCTTCAACTCACAAAGACAACATTCGCTTAAATGAAAGGTTAATAGTTGAATCTTATGAATCTTTTGTATATATTCTTAGTTAAACTTCATTTCTTTCCATAAAATGAAGGTTGATAGTTAAATGTAATGTATGTTTTGTATATATAAAAAAAATTTGTGTTTTTTTATATAGTGCGCTTTATGTAAAAAAAGCCCGTGCCTTATGGTGCGCCTTGCGCCTCAGTCCTCAGAGACTCATTGCGCCTTAGTGCGCCTTGGGCTTTTTAAAACACTGCTTCAGATAATAAAACCTCAGTTTACGTACCATGGTTGCCTAAAAATATGATTATTTAAAACTGGTTTGTCTTTTTTTATAAACATAAATAATACTTTTTATCTATAAATGAATTACCAAATTATCTGTATGTTTCGAAGATTCAAGGTTTGATTCATATACTCTAGGAGAAAATTGTTGATTTGAGCTATAAACCGCAGCTTAAAATTGGCAATCATGAGAAATCGGTATATTTTAACTTGTTGGTGCATTTTTTTTATTGAATGTGTTTGAATTACCAAATGTGTTTTTTTTGTAATTATGATCTTGGTTCTTTTTCTTTGTTGGATTCGAGTCTCTTTATGTAGTTAGTTATTTAGGCTCACTCTTCCTTTTTGGTTTTTGTTGGACACATTTTTTTTTTTCTTAAATTTATGTGTGTCCTTGTATTTATTTCATTTTTCTTCCTGAAAACTCATTTCTGGTTTCCTTTGAAAATTTTGGAGAACAAAATGATAGTACTTAAATTTGTGAAATTGTTATACTTATACTTTTTTAATTTTGTTCGGTTATAACTTATAACCTTTCATTTCTTGTTCCTATGGCTGTTAAGTTAGAACATCTACAAAAAGAAAAAAGTGTCTCTCTCTAGAAATGTTTTTCTCTCGCTTCTCTCCACCTTCGAACTTTTCCTAAATACATCACTTACTCATGGCGATTGCTAAATATCCAAGGATCGCTACTATTGAAAGAAAAGAATACACTTTCGATGTTGATCTTCGATACAGAGGTAGTCGGGTTAAGATCACAAAAACTACCTGGGACAAATATTTCACTATCTCTGTTCAATGGGCTTCCTTGTCCTGGATTTTGAAGAGCTTCTACACCCTGTTAGCTACGCCACTAAACCACAAGTTCTTCCTAGAGTCGAGACTTGACGACTACTCACTATGGGTTGAAAAAGTCATGAACCGGAGAGGTTACATAGCAGAGCTAACAAAGTAG

mRNA sequence

ATGGAAGGCGGATCCTCCTCTTGTGAAAGATTCAAGCTCTACGACCCGTTGGAATTGCACGAATTTCGGGACAAGTTCGTTGTAAGGATCGCTACTATTGAAAGAAAAGAATACACTTTCGATGTTGATCTTCGATACAGAGGTAGTCGGGTTAAGATCACAAAAACTACCTGGGACAAATATTTCACTATCTCTGTTCAATGGGCTTCCTTGTCCTGGATTTTGAAGAGCTTCTACACCCTGTTAGCTACGCCACTAAACCACAAGTTCTTCCTAGAGTCGAGACTTGACGACTACTCACTATGGGTTGAAAAAGTCATGAACCGGAGAGGTTACATAGCAGAGCTAACAAAGTAG

Coding sequence (CDS)

ATGGAAGGCGGATCCTCCTCTTGTGAAAGATTCAAGCTCTACGACCCGTTGGAATTGCACGAATTTCGGGACAAGTTCGTTGTAAGGATCGCTACTATTGAAAGAAAAGAATACACTTTCGATGTTGATCTTCGATACAGAGGTAGTCGGGTTAAGATCACAAAAACTACCTGGGACAAATATTTCACTATCTCTGTTCAATGGGCTTCCTTGTCCTGGATTTTGAAGAGCTTCTACACCCTGTTAGCTACGCCACTAAACCACAAGTTCTTCCTAGAGTCGAGACTTGACGACTACTCACTATGGGTTGAAAAAGTCATGAACCGGAGAGGTTACATAGCAGAGCTAACAAAGTAG

Protein sequence

MEGGSSSCERFKLYDPLELHEFRDKFVVRIATIERKEYTFDVDLRYRGSRVKITKTTWDKYFTISVQWASLSWILKSFYTLLATPLNHKFFLESRLDDYSLWVEKVMNRRGYIAELTK
Homology
[Close]
BLAST of Sed0010644 vs. NCBI nr
Match: KAA0050054.1 (hypothetical protein E6C27_scaffold675G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 84.3 bits (207), Expect = 7.5e-13
Identity = 43/88 (48.86%), Postives = 57/88 (64.77%), Query Frame = 0 

Query: 29  RIATIERKEYTFDVDLRYRGSRVKITKTTWDKYFTISVQWASLSWILKSFYTLLATPLNH 88
           R  TIE+K++ F VD R R  ++ IT+    K F+I+V   SL W+  SF TLL T    
Sbjct: 47  RSCTIEKKDFVFSVDNRSRDLKLLITEVGPYKSFSIAVTLESLEWLKSSFRTLLDTLRTT 106

Query: 89  KFFLESRLDDYSLWVEKVMNRRGYIAEL 117
           +FFLE R +DY LWV+K  NR+GYIAE+
Sbjct: 107 RFFLEKRFEDYCLWVQKTYNRKGYIAEI 134

[Close]
BLAST of Sed0010644 vs. NCBI nr
Match: TYK10355.1 (hypothetical protein E5676_scaffold367G00330 [Cucumis melo var. makuwa])

HSP 1 Score: 84.3 bits (207), Expect = 7.5e-13
Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = 0 

Query: 29  RIATIERKEYTFDVDLRYRGSRVKITKTTWDKYFTISVQWASLSWILKSFYTLLATPLNH 88
           R  TIE+K++   VD + R  ++ IT+    K F+I+V   SL W+  SF TLL TP   
Sbjct: 99  RSCTIEKKDFVLSVDNQSRDLKLLITEVGPYKSFSIAVTLESLEWLKSSFRTLLDTPRTT 158

Query: 89  KFFLESRLDDYSLWVEKVMNRRGYIAEL 117
           +FFLE R +DY LWV+K  NR+GYIAE+
Sbjct: 159 RFFLEKRFEDYCLWVQKTYNRKGYIAEI 186

[Close]
BLAST of Sed0010644 vs. NCBI nr
Match: KAA0039967.1 (hypothetical protein E6C27_scaffold122G002490 [Cucumis melo var. makuwa])

HSP 1 Score: 80.9 bits (198), Expect = 8.3e-12
Identity = 41/88 (46.59%), Postives = 56/88 (63.64%), Query Frame = 0 

Query: 29  RIATIERKEYTFDVDLRYRGSRVKITKTTWDKYFTISVQWASLSWILKSFYTLLATPLNH 88
           R  TIE+K++   VD R R  ++ IT+    K F+I+V   SL W+  SF TLL TP   
Sbjct: 41  RSCTIEKKDFVLSVDNRSRDFKLLITEVGPYKSFSIAVTLESLEWLKSSFRTLLDTPRTT 100

Query: 89  KFFLESRLDDYSLWVEKVMNRRGYIAEL 117
           +FFLE R ++  LWV+K  NR+GYIAE+
Sbjct: 101 RFFLEKRFEECCLWVQKTYNRKGYIAEI 128

[Close]
BLAST of Sed0010644 vs. NCBI nr
Match: TYK24535.1 (hypothetical protein E5676_scaffold266G00770 [Cucumis melo var. makuwa])

HSP 1 Score: 80.9 bits (198), Expect = 8.3e-12
Identity = 41/88 (46.59%), Postives = 56/88 (63.64%), Query Frame = 0 

Query: 29  RIATIERKEYTFDVDLRYRGSRVKITKTTWDKYFTISVQWASLSWILKSFYTLLATPLNH 88
           R  TIE+K++   VD R R  ++ IT+    K F+I+V   SL W+  SF TLL TP   
Sbjct: 41  RSCTIEKKDFVLSVDNRSRDFKLLITEVGPYKSFSIAVTLESLEWLKSSFRTLLDTPRTT 100

Query: 89  KFFLESRLDDYSLWVEKVMNRRGYIAEL 117
           +FFLE R ++  LWV+K  NR+GYIAE+
Sbjct: 101 RFFLEKRFEECCLWVQKTYNRKGYIAEI 128

[Close]
BLAST of Sed0010644 vs. NCBI nr
Match: KAA0039949.1 (hypothetical protein E6C27_scaffold122G002290 [Cucumis melo var. makuwa] >TYK24554.1 hypothetical protein E5676_scaffold266G00990 [Cucumis melo var. makuwa])

HSP 1 Score: 78.2 bits (191), Expect = 5.4e-11
Identity = 39/88 (44.32%), Postives = 56/88 (63.64%), Query Frame = 0 

Query: 29  RIATIERKEYTFDVDLRYRGSRVKITKTTWDKYFTISVQWASLSWILKSFYTLLATPLNH 88
           R  ++E+KE+   VD R R S + IT+    K F+I++   SL W+  +F  LL TP   
Sbjct: 9   RHCSVEKKEFVLSVDKRSRESNLLITEVGPYKSFSIAITPDSLEWLKMTFKALLNTPRTT 68

Query: 89  KFFLESRLDDYSLWVEKVMNRRGYIAEL 117
           +FF+E R  D+ LWV+K+ NRRGYIAE+
Sbjct: 69  RFFVEKRYVDFCLWVQKIHNRRGYIAEI 96

[Close]
BLAST of Sed0010644 vs. ExPASy TrEMBL
Match: A0A5A7U495 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00340 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 3.6e-13
Identity = 43/88 (48.86%), Postives = 57/88 (64.77%), Query Frame = 0 

Query: 29  RIATIERKEYTFDVDLRYRGSRVKITKTTWDKYFTISVQWASLSWILKSFYTLLATPLNH 88
           R  TIE+K++ F VD R R  ++ IT+    K F+I+V   SL W+  SF TLL T    
Sbjct: 47  RSCTIEKKDFVFSVDNRSRDLKLLITEVGPYKSFSIAVTLESLEWLKSSFRTLLDTLRTT 106

Query: 89  KFFLESRLDDYSLWVEKVMNRRGYIAEL 117
           +FFLE R +DY LWV+K  NR+GYIAE+
Sbjct: 107 RFFLEKRFEDYCLWVQKTYNRKGYIAEI 134

[Close]
BLAST of Sed0010644 vs. ExPASy TrEMBL
Match: A0A5D3CFS8 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00330 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 3.6e-13
Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = 0 

Query: 29  RIATIERKEYTFDVDLRYRGSRVKITKTTWDKYFTISVQWASLSWILKSFYTLLATPLNH 88
           R  TIE+K++   VD + R  ++ IT+    K F+I+V   SL W+  SF TLL TP   
Sbjct: 99  RSCTIEKKDFVLSVDNQSRDLKLLITEVGPYKSFSIAVTLESLEWLKSSFRTLLDTPRTT 158

Query: 89  KFFLESRLDDYSLWVEKVMNRRGYIAEL 117
           +FFLE R +DY LWV+K  NR+GYIAE+
Sbjct: 159 RFFLEKRFEDYCLWVQKTYNRKGYIAEI 186

[Close]
BLAST of Sed0010644 vs. ExPASy TrEMBL
Match: A0A5D3DLP0 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00770 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 4.0e-12
Identity = 41/88 (46.59%), Postives = 56/88 (63.64%), Query Frame = 0 

Query: 29  RIATIERKEYTFDVDLRYRGSRVKITKTTWDKYFTISVQWASLSWILKSFYTLLATPLNH 88
           R  TIE+K++   VD R R  ++ IT+    K F+I+V   SL W+  SF TLL TP   
Sbjct: 41  RSCTIEKKDFVLSVDNRSRDFKLLITEVGPYKSFSIAVTLESLEWLKSSFRTLLDTPRTT 100

Query: 89  KFFLESRLDDYSLWVEKVMNRRGYIAEL 117
           +FFLE R ++  LWV+K  NR+GYIAE+
Sbjct: 101 RFFLEKRFEECCLWVQKTYNRKGYIAEI 128

[Close]
BLAST of Sed0010644 vs. ExPASy TrEMBL
Match: A0A5A7TEK8 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002490 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 4.0e-12
Identity = 41/88 (46.59%), Postives = 56/88 (63.64%), Query Frame = 0 

Query: 29  RIATIERKEYTFDVDLRYRGSRVKITKTTWDKYFTISVQWASLSWILKSFYTLLATPLNH 88
           R  TIE+K++   VD R R  ++ IT+    K F+I+V   SL W+  SF TLL TP   
Sbjct: 41  RSCTIEKKDFVLSVDNRSRDFKLLITEVGPYKSFSIAVTLESLEWLKSSFRTLLDTPRTT 100

Query: 89  KFFLESRLDDYSLWVEKVMNRRGYIAEL 117
           +FFLE R ++  LWV+K  NR+GYIAE+
Sbjct: 101 RFFLEKRFEECCLWVQKTYNRKGYIAEI 128

[Close]
BLAST of Sed0010644 vs. ExPASy TrEMBL
Match: A0A5D3DLT1 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00990 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.6e-11
Identity = 39/88 (44.32%), Postives = 56/88 (63.64%), Query Frame = 0 

Query: 29  RIATIERKEYTFDVDLRYRGSRVKITKTTWDKYFTISVQWASLSWILKSFYTLLATPLNH 88
           R  ++E+KE+   VD R R S + IT+    K F+I++   SL W+  +F  LL TP   
Sbjct: 9   RHCSVEKKEFVLSVDKRSRESNLLITEVGPYKSFSIAITPDSLEWLKMTFKALLNTPRTT 68

Query: 89  KFFLESRLDDYSLWVEKVMNRRGYIAEL 117
           +FF+E R  D+ LWV+K+ NRRGYIAE+
Sbjct: 69  RFFVEKRYVDFCLWVQKIHNRRGYIAEI 96

The following BLAST results are available for this feature:
BLAST of Sed0010644 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0050054.17.5e-1348.86hypothetical protein E6C27_scaffold675G00340 [Cucumis melo var. makuwa][more]
TYK10355.17.5e-1347.73hypothetical protein E5676_scaffold367G00330 [Cucumis melo var. makuwa][more]
KAA0039967.18.3e-1246.59hypothetical protein E6C27_scaffold122G002490 [Cucumis melo var. makuwa][more]
TYK24535.18.3e-1246.59hypothetical protein E5676_scaffold266G00770 [Cucumis melo var. makuwa][more]
KAA0039949.15.4e-1144.32hypothetical protein E6C27_scaffold122G002290 [Cucumis melo var. makuwa] >TYK245... [more]
BLAST of Sed0010644 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sed0010644 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7U4953.6e-1348.86DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3CFS83.6e-1347.73DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5D3DLP04.0e-1246.59DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7TEK84.0e-1246.59DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3DLT12.6e-1144.32DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
BLAST of Sed0010644 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0010644.1Sed0010644.1mRNA