Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTAATTTTAGGTGAAAATCAACACAAACACAAAAAAAACGTTCAATTCTGAAAGAGTTCAAAATTCGAACCAAAATTCTTGAAGCCAAAGAGCCAAATCGAGACTTCTTCTTCTTCATCATCCCAACTCTCTCTTTTCAAGTTTCCAGCTCCGATTCCGGGGAACTATTCCGGCGAACTAGGGTTTCTATTCCGGTGACCTAGGGTTTCTGTTCCGGCGAATGCTGTTGCTCCTTCTACTCCGATGAATCGGCCGCACATCAACAATCCTCAATCGAATTCCATTTCTCAGTGCCGTGAATGCGGCATCTCTCAATCCGAGTGCTGGATTCTCCACAATGTTCGTCTCAAAGCGTCTCTCCGTCGTCTCTGCACCAATTGCGTCCTCAAGAACAACCTCTCCCGATTCTGTCCCGTTTGCTTCGATATCTACGACGACACGACGGCGCCGCCGTCCCACCAGCGAGTTATGTGTTTCCGATGTCCTTCGATCTCTCATCTCTCTTGTATTTCTTTTCGGTTTTCTTCTACCTTCCTGTGCCCTAGCTGCTCCGATCCTCGTTTTGCCTTCTTACACGGTTCTGAATCTGGCGGCGTTTCTCAATCGGAGTCCGTTGAGCCTGGTTTGGCCGGCGTTGATGGTGAATCGGCTAAGGCGATTGTCACTGCGGCTCGTATCGCTGCTCAATCTCTGCGGAGAGCGGCGGCTGGCGCTAGGGCTGTGGCGGAGATGAAGATTAAGAATGCTGCGTTTGCTAAGAAGCAGGCTGCTCTCGCTTTGGAGCGGCTTGCTTATCTTGTGCTACAGGAGAAAGATGGCACTGGATTTGTTAATAGCAATGGAGATGCTATTGCTGGTGAACCCTAGCTGCAGGACAAGGGAGGTAACAACTTCGATTCTGTAGCCGTAGATGTAGATTAAGCAATTGAGAGTAGGATTTTGAAACTGTCTTGTTCAATCGAATGCAGAGCGTAGAGGTACGATTAACCATCCATGGAAACTTCTGGATCCATGTTTGTGATGATTTCTCTGTGTTCATGGATGCTAGGAAAGATCAGTAGAGGGAAGTGTGTAAGGATTTTCATGTATGTTTCAACATTGTTTGTTTGTTCCTTTGGGGGATTTTCTTCATATTGTAATGCTATTGAGTATGAGGCAACTCTTTTTCTGCTTCTCTATTGATTCCAATTCTTTATTTTGCCATTTTTGTTTCTGTTTTGACTTTCTGGAGTTATTCTTCTTCATCCTGCTCTCATCTTTTGATAATTTTA
mRNA sequence
TTTAATTTTAGGTGAAAATCAACACAAACACAAAAAAAACGTTCAATTCTGAAAGAGTTCAAAATTCGAACCAAAATTCTTGAAGCCAAAGAGCCAAATCGAGACTTCTTCTTCTTCATCATCCCAACTCTCTCTTTTCAAGTTTCCAGCTCCGATTCCGGGGAACTATTCCGGCGAACTAGGGTTTCTATTCCGGTGACCTAGGGTTTCTGTTCCGGCGAATGCTGTTGCTCCTTCTACTCCGATGAATCGGCCGCACATCAACAATCCTCAATCGAATTCCATTTCTCAGTGCCGTGAATGCGGCATCTCTCAATCCGAGTGCTGGATTCTCCACAATGTTCGTCTCAAAGCGTCTCTCCGTCGTCTCTGCACCAATTGCGTCCTCAAGAACAACCTCTCCCGATTCTGTCCCGTTTGCTTCGATATCTACGACGACACGACGGCGCCGCCGTCCCACCAGCGAGTTATGTGTTTCCGATGTCCTTCGATCTCTCATCTCTCTTGTATTTCTTTTCGGTTTTCTTCTACCTTCCTGTGCCCTAGCTGCTCCGATCCTCGTTTTGCCTTCTTACACGGTTCTGAATCTGGCGGCGTTTCTCAATCGGAGTCCGTTGAGCCTGGTTTGGCCGGCGTTGATGGTGAATCGGCTAAGGCGATTGTCACTGCGGCTCGTATCGCTGCTCAATCTCTGCGGAGAGCGGCGGCTGGCGCTAGGGCTGTGGCGGAGATGAAGATTAAGAATGCTGCGTTTGCTAAGAAGCAGGCTGCTCTCGCTTTGGAGCGGCTTGCTTATCTTGTGCTACAGGAGAAAGATGGCACTGGATTTGTTAATAGCAATGGAGATGCTATTGCTGGTGAACCCTAGCTGCAGGACAAGGGAGGTAACAACTTCGATTCTGTAGCCGTAGATGTAGATTAAGCAATTGAGAGTAGGATTTTGAAACTGTCTTGTTCAATCGAATGCAGAGCGTAGAGGTACGATTAACCATCCATGGAAACTTCTGGATCCATGTTTGTGATGATTTCTCTGTGTTCATGGATGCTAGGAAAGATCAGTAGAGGGAAGTGTGTAAGGATTTTCATGTATGTTTCAACATTGTTTGTTTGTTCCTTTGGGGGATTTTCTTCATATTGTAATGCTATTGAGTATGAGGCAACTCTTTTTCTGCTTCTCTATTGATTCCAATTCTTTATTTTGCCATTTTTGTTTCTGTTTTGACTTTCTGGAGTTATTCTTCTTCATCCTGCTCTCATCTTTTGATAATTTTA
Coding sequence (CDS)
ATGAATCGGCCGCACATCAACAATCCTCAATCGAATTCCATTTCTCAGTGCCGTGAATGCGGCATCTCTCAATCCGAGTGCTGGATTCTCCACAATGTTCGTCTCAAAGCGTCTCTCCGTCGTCTCTGCACCAATTGCGTCCTCAAGAACAACCTCTCCCGATTCTGTCCCGTTTGCTTCGATATCTACGACGACACGACGGCGCCGCCGTCCCACCAGCGAGTTATGTGTTTCCGATGTCCTTCGATCTCTCATCTCTCTTGTATTTCTTTTCGGTTTTCTTCTACCTTCCTGTGCCCTAGCTGCTCCGATCCTCGTTTTGCCTTCTTACACGGTTCTGAATCTGGCGGCGTTTCTCAATCGGAGTCCGTTGAGCCTGGTTTGGCCGGCGTTGATGGTGAATCGGCTAAGGCGATTGTCACTGCGGCTCGTATCGCTGCTCAATCTCTGCGGAGAGCGGCGGCTGGCGCTAGGGCTGTGGCGGAGATGAAGATTAAGAATGCTGCGTTTGCTAAGAAGCAGGCTGCTCTCGCTTTGGAGCGGCTTGCTTATCTTGTGCTACAGGAGAAAGATGGCACTGGATTTGTTAATAGCAATGGAGATGCTATTGCTGGTGAACCCTAG
Protein sequence
MNRPHINNPQSNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCFDIYDDTTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPSCSDPRFAFLHGSESGGVSQSESVEPGLAGVDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALERLAYLVLQEKDGTGFVNSNGDAIAGEP
Homology
BLAST of Sed0010166 vs. NCBI nr
Match:
XP_038902666.1 (uncharacterized protein LOC120089301 [Benincasa hispida])
HSP 1 Score: 317.0 bits (811), Expect = 1.2e-82
Identity = 162/208 (77.88%), Postives = 178/208 (85.58%), Query Frame = 0
Query: 1 MNRPHINNPQSNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCF 60
MNR H N+ QSNS+S C+ECGISQS CWILHNVRLKAS RRLCTNCVLK+NLSRFCP+CF
Sbjct: 1 MNRSHCNHLQSNSVSHCQECGISQSACWILHNVRLKASFRRLCTNCVLKHNLSRFCPLCF 60
Query: 61 DIYDDTTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPSCSDPRFAFLHGSESGGVSQ 120
D+YDD+T PPSHQRVMCFRCPSISHLSC SFRFSSTFLCP CSDP FAF G +SGG+ Q
Sbjct: 61 DVYDDSTPPPSHQRVMCFRCPSISHLSCASFRFSSTFLCPLCSDPCFAFFDGFDSGGLCQ 120
Query: 121 SESVEPGLA--GVDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALA 180
SES LA VD +SAKAIV AAR++AQS+RRAA ARAVAEMKIKNAAFAKKQA LA
Sbjct: 121 SESTVAFLARRNVDAKSAKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLA 180
Query: 181 LERLAYLVLQEKDGTGFVNSNGDAIAGE 207
LERLAYLVLQEKD G+ +NGDA+AGE
Sbjct: 181 LERLAYLVLQEKDRNGYAKTNGDAVAGE 208
BLAST of Sed0010166 vs. NCBI nr
Match:
XP_022955770.1 (uncharacterized protein LOC111457661 [Cucurbita moschata])
HSP 1 Score: 312.0 bits (798), Expect = 3.9e-81
Identity = 159/205 (77.56%), Postives = 173/205 (84.39%), Query Frame = 0
Query: 1 MNRPHINNPQSNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCF 60
MNRPH N+ QSNSIS C ECGISQS CWILHNVR KAS RRLCTNCVLKNNLSRFCP+CF
Sbjct: 55 MNRPHYNHLQSNSISNCHECGISQSVCWILHNVRFKASFRRLCTNCVLKNNLSRFCPLCF 114
Query: 61 DIYDDTTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPSCSDPRFAFLHGSESGGVSQ 120
DIYDD+T P SHQRVMCFRCPSISH+SC SFRFSSTFLCP CSDP FAF G +S G+ Q
Sbjct: 115 DIYDDSTPPSSHQRVMCFRCPSISHVSCASFRFSSTFLCPVCSDPCFAFFDGFDSDGLRQ 174
Query: 121 SESVEPGLAGVDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALE 180
SE LAG DG+SAKAIV AAR+AAQS+RRAAA ARAVAEMKI+NA FAKKQA LALE
Sbjct: 175 SEPAVAVLAGRDGKSAKAIVAAARVAAQSMRRAAADARAVAEMKIRNAVFAKKQATLALE 234
Query: 181 RLAYLVLQEKDGTGFVNSNGDAIAG 206
RLA+LVLQEKD G+ +NG+A AG
Sbjct: 235 RLAFLVLQEKDRNGYAKTNGNAAAG 259
BLAST of Sed0010166 vs. NCBI nr
Match:
KAG6582143.1 (hypothetical protein SDJN03_22145, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 312.0 bits (798), Expect = 3.9e-81
Identity = 159/205 (77.56%), Postives = 173/205 (84.39%), Query Frame = 0
Query: 1 MNRPHINNPQSNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCF 60
MNRPH N+ QSNSIS C ECGISQS CWILHNVR KAS RRLCTNCVLKNNLSRFCP+CF
Sbjct: 55 MNRPHYNHLQSNSISNCHECGISQSVCWILHNVRFKASFRRLCTNCVLKNNLSRFCPLCF 114
Query: 61 DIYDDTTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPSCSDPRFAFLHGSESGGVSQ 120
DIYDD+T P SHQRVMCFRCPSISH+SC SFRFSSTFLCP CSDP FAF G +S G+ Q
Sbjct: 115 DIYDDSTPPSSHQRVMCFRCPSISHVSCASFRFSSTFLCPVCSDPCFAFFDGFDSDGLRQ 174
Query: 121 SESVEPGLAGVDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALE 180
SE LAG DG+SAKAIV AAR+AAQS+RRAAA ARAVAEMKI+NA FAKKQA LALE
Sbjct: 175 SEPAVAVLAGRDGKSAKAIVAAARVAAQSMRRAAADARAVAEMKIRNAVFAKKQATLALE 234
Query: 181 RLAYLVLQEKDGTGFVNSNGDAIAG 206
RLA+LVLQEKD G+ +NG+A AG
Sbjct: 235 RLAFLVLQEKDRNGYAKTNGNAAAG 259
BLAST of Sed0010166 vs. NCBI nr
Match:
KAG7018542.1 (hypothetical protein SDJN02_20411, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 312.0 bits (798), Expect = 3.9e-81
Identity = 159/205 (77.56%), Postives = 173/205 (84.39%), Query Frame = 0
Query: 1 MNRPHINNPQSNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCF 60
MNRPH N+ QSNSIS C ECGISQS CWILHNVR KAS RRLCTNCVLKNNLSRFCP+CF
Sbjct: 55 MNRPHYNHLQSNSISNCHECGISQSVCWILHNVRFKASFRRLCTNCVLKNNLSRFCPLCF 114
Query: 61 DIYDDTTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPSCSDPRFAFLHGSESGGVSQ 120
DIYDD+T P SHQRVMCFRCPSISH+SC SFRFSSTFLCP CSDP FAF G +S G+ Q
Sbjct: 115 DIYDDSTPPSSHQRVMCFRCPSISHVSCASFRFSSTFLCPVCSDPCFAFFDGFDSDGLRQ 174
Query: 121 SESVEPGLAGVDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALE 180
SE LAG DG+SAKAIV AAR+AAQS+RRAAA ARAVAEMKI+NA FAKKQA LALE
Sbjct: 175 SEPAVAVLAGRDGKSAKAIVAAARVAAQSMRRAAADARAVAEMKIRNAVFAKKQATLALE 234
Query: 181 RLAYLVLQEKDGTGFVNSNGDAIAG 206
RLA+LVLQEKD G+ +NG+A AG
Sbjct: 235 RLAFLVLQEKDRNGYAKTNGNAAAG 259
BLAST of Sed0010166 vs. NCBI nr
Match:
XP_023527750.1 (uncharacterized protein LOC111790876 [Cucurbita pepo subsp. pepo] >XP_023527751.1 uncharacterized protein LOC111790876 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 311.6 bits (797), Expect = 5.0e-81
Identity = 159/205 (77.56%), Postives = 172/205 (83.90%), Query Frame = 0
Query: 1 MNRPHINNPQSNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCF 60
MNRPH N+ QSNSIS C ECGISQS CWILHNVR KAS RRLCTNCVLKNNLSRFCP+CF
Sbjct: 1 MNRPHCNHLQSNSISNCHECGISQSVCWILHNVRFKASFRRLCTNCVLKNNLSRFCPLCF 60
Query: 61 DIYDDTTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPSCSDPRFAFLHGSESGGVSQ 120
DIYDD+T P SHQRVMCFRCPSISH+SC SFRFSSTFLCP CSDP FAF G +SGG+ Q
Sbjct: 61 DIYDDSTPPSSHQRVMCFRCPSISHVSCASFRFSSTFLCPICSDPCFAFFDGFDSGGLRQ 120
Query: 121 SESVEPGLAGVDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALE 180
SE LAG DG+SAKAIV AAR+AAQS+RRAAA ARAVAEMKI+NA FAKKQA LALE
Sbjct: 121 SEPAVAVLAGRDGKSAKAIVAAARVAAQSMRRAAADARAVAEMKIRNAVFAKKQATLALE 180
Query: 181 RLAYLVLQEKDGTGFVNSNGDAIAG 206
RLAYLVL KD G+ +NG+A AG
Sbjct: 181 RLAYLVLHGKDRNGYAKTNGNAAAG 205
BLAST of Sed0010166 vs. ExPASy TrEMBL
Match:
A0A6J1GVZ7 (uncharacterized protein LOC111457661 OS=Cucurbita moschata OX=3662 GN=LOC111457661 PE=4 SV=1)
HSP 1 Score: 312.0 bits (798), Expect = 1.9e-81
Identity = 159/205 (77.56%), Postives = 173/205 (84.39%), Query Frame = 0
Query: 1 MNRPHINNPQSNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCF 60
MNRPH N+ QSNSIS C ECGISQS CWILHNVR KAS RRLCTNCVLKNNLSRFCP+CF
Sbjct: 55 MNRPHYNHLQSNSISNCHECGISQSVCWILHNVRFKASFRRLCTNCVLKNNLSRFCPLCF 114
Query: 61 DIYDDTTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPSCSDPRFAFLHGSESGGVSQ 120
DIYDD+T P SHQRVMCFRCPSISH+SC SFRFSSTFLCP CSDP FAF G +S G+ Q
Sbjct: 115 DIYDDSTPPSSHQRVMCFRCPSISHVSCASFRFSSTFLCPVCSDPCFAFFDGFDSDGLRQ 174
Query: 121 SESVEPGLAGVDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALE 180
SE LAG DG+SAKAIV AAR+AAQS+RRAAA ARAVAEMKI+NA FAKKQA LALE
Sbjct: 175 SEPAVAVLAGRDGKSAKAIVAAARVAAQSMRRAAADARAVAEMKIRNAVFAKKQATLALE 234
Query: 181 RLAYLVLQEKDGTGFVNSNGDAIAG 206
RLA+LVLQEKD G+ +NG+A AG
Sbjct: 235 RLAFLVLQEKDRNGYAKTNGNAAAG 259
BLAST of Sed0010166 vs. ExPASy TrEMBL
Match:
A0A6J1IXP5 (uncharacterized protein LOC111479468 OS=Cucurbita maxima OX=3661 GN=LOC111479468 PE=4 SV=1)
HSP 1 Score: 310.8 bits (795), Expect = 4.2e-81
Identity = 158/205 (77.07%), Postives = 171/205 (83.41%), Query Frame = 0
Query: 1 MNRPHINNPQSNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCF 60
MNRPH N+ QSNSIS C ECGISQS CWILHNVR KAS RRLCTNCVLKNNLSRFCP+CF
Sbjct: 1 MNRPHCNHLQSNSISNCHECGISQSVCWILHNVRFKASFRRLCTNCVLKNNLSRFCPLCF 60
Query: 61 DIYDDTTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPSCSDPRFAFLHGSESGGVSQ 120
DIYDD+T P SHQRVMCFRCPSISH+SC SFRFSSTFLCP CSDP FAF G +SG + Q
Sbjct: 61 DIYDDSTPPSSHQRVMCFRCPSISHISCTSFRFSSTFLCPLCSDPCFAFFDGFDSGSLRQ 120
Query: 121 SESVEPGLAGVDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALE 180
SE LAG DG+SAKAIV AAR+ AQS+RRAAA ARAVAEMK +NA FAKKQA LALE
Sbjct: 121 SELAVSVLAGRDGKSAKAIVAAARVVAQSMRRAAADARAVAEMKFRNAVFAKKQATLALE 180
Query: 181 RLAYLVLQEKDGTGFVNSNGDAIAG 206
RLAYLVLQEKD G+ +NG+A AG
Sbjct: 181 RLAYLVLQEKDRNGYAKTNGNAAAG 205
BLAST of Sed0010166 vs. ExPASy TrEMBL
Match:
A0A6J1I928 (uncharacterized protein LOC111470781 OS=Cucurbita maxima OX=3661 GN=LOC111470781 PE=4 SV=1)
HSP 1 Score: 303.5 bits (776), Expect = 6.7e-79
Identity = 156/201 (77.61%), Postives = 173/201 (86.07%), Query Frame = 0
Query: 10 QSNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCFDIYDDTTAP 69
QSNSIS C+ECGI+QSECWILHNVR+KAS RRLCTNC+L+NN+SRFCPVCFD+YDD+TAP
Sbjct: 2 QSNSISHCQECGITQSECWILHNVRVKASFRRLCTNCILRNNISRFCPVCFDVYDDSTAP 61
Query: 70 PSHQRVMCFRCPSISHLSCISFRFSSTFLCPSCSDPRFAFL--HGSESGGVSQSESVEPG 129
PSHQRVMCFRCPSISHLSCISFRFSSTFLCP CSDP F F GS G+ QSE
Sbjct: 62 PSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFTFFDCFGSGGLGLCQSEYAVAT 121
Query: 130 LAG--VDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALERLAYL 189
LAG + G+SAKA+V AAR+AAQS+RRAAA ARAVAEMKIKNAAFAKKQA LALERLAYL
Sbjct: 122 LAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYL 181
Query: 190 VLQEKDGTGFVNSNGDAIAGE 207
L+EKDG + NSNGDA+AGE
Sbjct: 182 ELEEKDGNEYGNSNGDAVAGE 202
BLAST of Sed0010166 vs. ExPASy TrEMBL
Match:
A0A6J1FY52 (uncharacterized protein LOC111448356 OS=Cucurbita moschata OX=3662 GN=LOC111448356 PE=4 SV=1)
HSP 1 Score: 303.5 bits (776), Expect = 6.7e-79
Identity = 157/201 (78.11%), Postives = 172/201 (85.57%), Query Frame = 0
Query: 10 QSNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCFDIYDDTTAP 69
QSNSIS C+ECGI+QSECWILHNVR+KAS RRLCTNCVL+NN+SRFCPVCFD+YDD+TAP
Sbjct: 2 QSNSISHCQECGITQSECWILHNVRVKASFRRLCTNCVLRNNISRFCPVCFDVYDDSTAP 61
Query: 70 PSHQRVMCFRCPSISHLSCISFRFSSTFLCPSCSDPRFAFL--HGSESGGVSQSESVEPG 129
PSHQRVMCFRCPSISHLSCISFRFSSTFLCP CSDP F F GS G+ QSE
Sbjct: 62 PSHQRVMCFRCPSISHLSCISFRFSSTFLCPLCSDPSFTFFDCFGSGGLGLCQSEYAVAT 121
Query: 130 LAG--VDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALERLAYL 189
LAG + G+SAKA+V AAR+AAQS+RRAAA ARAVAEMKIKNAAFAKKQA LALERLAYL
Sbjct: 122 LAGRDISGKSAKAVVAAARVAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYL 181
Query: 190 VLQEKDGTGFVNSNGDAIAGE 207
L+EKDG NSNGDA+AGE
Sbjct: 182 ELEEKDGNEHANSNGDAVAGE 202
BLAST of Sed0010166 vs. ExPASy TrEMBL
Match:
A0A0A0L5G4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171130 PE=4 SV=1)
HSP 1 Score: 302.0 bits (772), Expect = 1.9e-78
Identity = 156/209 (74.64%), Postives = 175/209 (83.73%), Query Frame = 0
Query: 1 MNRPHINNPQSNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCF 60
MNR H N+ QSNSIS C++CGISQS CWILHNVR KA+ RRLCTNCVLK+NLSRFCP+CF
Sbjct: 66 MNRQHSNHLQSNSISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCF 125
Query: 61 DIYDDTTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPSCSDPRFAFLHGSESGG-VS 120
D+Y+D+T PPSH RVMCFRCPSISHLSC+SFRFSSTFLCP CSDPRF F G +SGG +
Sbjct: 126 DVYEDSTPPPSHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFDGFDSGGSLC 185
Query: 121 QSESVEPGLAG--VDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAAL 180
QSES LAG VD +S KAIV AAR++AQS+RRAA ARAVAEMKIKNAAFAKKQA L
Sbjct: 186 QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATL 245
Query: 181 ALERLAYLVLQEKDGTGFVNSNGDAIAGE 207
ALE+LAYLVLQEKD G+ SNGDA+ E
Sbjct: 246 ALEQLAYLVLQEKDKNGYSKSNGDAVDSE 274
BLAST of Sed0010166 vs. TAIR 10
Match:
AT1G09520.1 (LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786); BEST Arabidopsis thaliana protein match is: PHD finger family protein (TAIR:AT3G17460.1); Has 56 Blast hits to 56 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 4; Plants - 46; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )
HSP 1 Score: 112.8 bits (281), Expect = 3.2e-25
Identity = 71/183 (38.80%), Postives = 106/183 (57.92%), Query Frame = 0
Query: 11 SNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCFDIYDDTTAPP 70
+NS +C +CG S+ W++H VRL+ASLR CT+C+L+N+ + FCP CF +YD ++PP
Sbjct: 20 ANSTERCDDCG--SSDAWVIHTVRLRASLRFFCTHCLLRNHPASFCPGCFALYD--SSPP 79
Query: 71 SHQRVMCF--RCPSISHLSCISFRFSSTFLCPSCSDPR-FAFLHGSESGGVSQSESVEPG 130
S +RV C C S++H+ C ++LCP C DP F+F E G
Sbjct: 80 SFRRVSCSIKGCHSLTHIHCAGDESHLSYLCPPCRDPNSFSFFRPIVD---------ENG 139
Query: 131 LAGVDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALERLAYLVL 190
VD ++A + AA+IAA S+ +A A+ + + K AA AKK+A ALE++ L
Sbjct: 140 SRFVDKALSEAFLCAAKIAASSMNKAVMTAKCETDRRGKEAALAKKRAREALEQVVMLDA 189
BLAST of Sed0010166 vs. TAIR 10
Match:
AT3G17460.1 (PHD finger family protein )
HSP 1 Score: 80.9 bits (198), Expect = 1.3e-15
Identity = 65/192 (33.85%), Postives = 95/192 (49.48%), Query Frame = 0
Query: 18 RECGI-SQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCFDIYDDTTAPPSHQRVM 77
REC + + E +H V + RRLCT+C+LK FC VCF+++D+ A P R++
Sbjct: 8 RECIVCREKEPSFIHTVIKTGAFRRLCTDCLLKEYREHFCSVCFNLFDN--AVPPQARII 67
Query: 78 CFRCPSISHLSCISFRFS--------------STFLCPSCSDPRFAFLHGSESGGVSQSE 137
C CPS +HLSC + S S+F C CS+P F F S +E
Sbjct: 68 CVNCPSSTHLSCSTQPPSSSAASSSSSAPPPASSFTCQPCSNPNFTFFPKSR-----VNE 127
Query: 138 SVEPGLAGVDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALERL 195
V P + +SA A+V A I+ ++ +A A + A KI A AK +A AL L
Sbjct: 128 DV-PDETPLTPKSAMALVAAGNISVANMNKAVALLKEEALKKIIAAKTAKLRAKGALTNL 187
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038902666.1 | 1.2e-82 | 77.88 | uncharacterized protein LOC120089301 [Benincasa hispida] | [more] |
XP_022955770.1 | 3.9e-81 | 77.56 | uncharacterized protein LOC111457661 [Cucurbita moschata] | [more] |
KAG6582143.1 | 3.9e-81 | 77.56 | hypothetical protein SDJN03_22145, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7018542.1 | 3.9e-81 | 77.56 | hypothetical protein SDJN02_20411, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_023527750.1 | 5.0e-81 | 77.56 | uncharacterized protein LOC111790876 [Cucurbita pepo subsp. pepo] >XP_023527751.... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1GVZ7 | 1.9e-81 | 77.56 | uncharacterized protein LOC111457661 OS=Cucurbita moschata OX=3662 GN=LOC1114576... | [more] |
A0A6J1IXP5 | 4.2e-81 | 77.07 | uncharacterized protein LOC111479468 OS=Cucurbita maxima OX=3661 GN=LOC111479468... | [more] |
A0A6J1I928 | 6.7e-79 | 77.61 | uncharacterized protein LOC111470781 OS=Cucurbita maxima OX=3661 GN=LOC111470781... | [more] |
A0A6J1FY52 | 6.7e-79 | 78.11 | uncharacterized protein LOC111448356 OS=Cucurbita moschata OX=3662 GN=LOC1114483... | [more] |
A0A0A0L5G4 | 1.9e-78 | 74.64 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171130 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT1G09520.1 | 3.2e-25 | 38.80 | LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12... | [more] |
AT3G17460.1 | 1.3e-15 | 33.85 | PHD finger family protein | [more] |