Sed0009894 (gene) Chayote v1

Overview
NameSed0009894
Typegene
OrganismSechium edule (Chayote v1)
Description40S ribosomal protein S15
LocationLG04: 34246844 .. 34248956 (-)
RNA-Seq ExpressionSed0009894
SyntenySed0009894
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAATACCCTAAAACGAAATCTTGTCGATTAGGTCATCCAGGAGATCCGAGAACAACCATGGTAAGTCTTCAACACCTTCTTCTCCGGCGTCTTTTTCTTCCATTTTTTGCTGACTATGTCTTTTCAGGCGGATGTGGAAGCCGATGTTGCAGTCGCCGGTCAGCCAAAGAAGAGAACGTTCAAGAAGTTCAGCTTCCGCGGCGTCGATTTGGATGCTTTGCTCGACATGTCGACCGATGAGCTCGTCAAGCTTTTCACTGCTCGTGCTCGCAGAAGGTTCCTTAACTGAATGTGTATGAATTTCTTTTTAGTTTTTTTCGAATTGTTTAATTGGTTTCTTACCTGTGTTGTTTGTGATTTTGGGACAGGTTTCGAAGGGGTTTGACAAGGAAGCCAATGGCCCTTATAAAGAAGCTTCGCAAAGCGGTAAATATCATTTAGAACATTTTTTTAAACTCCAAGCTAATTTAATTTAGGAATGATTTTGCGAGTGTGTGAAGTGTTGATGTAAATGGGTGAGGAATTGAGGATATGTTACTGCATTGTTCTGAATCTTGATTGTAATTCGATGGGTGTTTTCGGGAAGGATCTTAATTTTTTTGCTCAGTTTTTCTCTGACTTTTCTTGTTTAGTTGATTAGTGCCAAGTAAATATATGTACTTATCAATGGAATTATTAAGAATAATTAACACTTTGTATGTTTTTGTTTGGTTGTATCAACTAATATGGTTAATCCTCGCCTGCAATTTTTATTTCAAGGGCATGCTTGGGACAAATCACTTTTCTGTATTCTATTTCTAAATCTCACGTAACATGCTTTTGATCTATTAAAATCCGTCCTTTGAGAGTTAAAGCTGTGTTGAAGAGGGTAAAGTCAAGCATGAAGATTTTTGATGATTTGGAATTAATCTATTGGTGGCTGTGTTTTACTGCTCCTTAAAATATGTTTTGGACTTGTTTTGAATATGAGAAATGTTATTTTCCATACTTCAAAATCATTCACAAATACGAACCAATGATCATTAATAAGCTAAAGGTTGTGATCCTGTTTTGCTGCTTGCAATGCTGTACCTGCTATTGATTTTTTTTCTTCATATATTGACATGCCTTATTTTGCTTTTATTTATTTATCATATCTGGACATGGGAACTTACCCATTGGTAGATCTTTTGGTTATCGTACCATGAGTCTCTGAAACTAGTCATTTTAGTGTGATGTAATTTTTTGCCATTGGATTTCTCATATCCTAACATGAGAACTTTAGATCATCCTCCAGTGGTAGATTTGTAAGTTTATATGCCTTGTGTATCAGTTCTTCATTACCATATTTCTTCCATGGGAACTTAATCATACTCCTATGGTTGATTTGAAAGTGAGTGATTATGTATATCTAAAATTCTTCATTTGTACTTATCTATTGATATTTACTTTTTCATCTCGTTTTGAATTGCCTGCTAACCTGTCGCCCTCTGGACCCCTCTTCTTCCCTCTCCTAAGCACTAGTTTTTTTTTTTTTGGTTTATGTCTCATCTTATCTATGATTTGTTCTAATGAATAGAAAAGGGAAGCACCTCCTGGTGAGAAGCCAGAACCCGTCCGAACTCACCTCCGAAATATGATCATTGTCCCAGAGATGATCGGAAGCATTATTGGAGTTTACAGCGGAAAAATCTTCAATCAAGTCGAAATCAAGCCAGAGATGATCGGCCATTACCTAGCAGAGTTCTCCATTTCATACAAGCCTGTGAAGCATGGGAGACCAGGTATCGGTGCTACCCACTCTTCAAGGTTCATTCCTCTTAAGTGAAATCATAGTCACTTTCTTGCTTGCCTAGGTTTGTTATATTTTTACAAGAAACTTGGATTATGTTTACCAGATTTTGTTCCTTGGTTTTCCTTATTGTTCTATTATATCCTTATTCGTACCATGGCAAGCTGGGGCGGTTTAGTTTTTGGTATCTTGTGTTACAGTTAAAATTTTATTCCTACTTGTTTCAACATAATCTAGAGTCTAGACATGGTTGCTTATCAGTTTCGTTTTCAAGCAATGTTACAAAAGTGTTGAGTAACGTTTCAAAAATTTTAAAATTAAAATTTCTTTTTGCAATGTTA

mRNA sequence

CAAATACCCTAAAACGAAATCTTGTCGATTAGGTCATCCAGGAGATCCGAGAACAACCATGGCGGATGTGGAAGCCGATGTTGCAGTCGCCGGTCAGCCAAAGAAGAGAACGTTCAAGAAGTTCAGCTTCCGCGGCGTCGATTTGGATGCTTTGCTCGACATGTCGACCGATGAGCTCGTCAAGCTTTTCACTGCTCGTGCTCGCAGAAGGTTTCGAAGGGGTTTGACAAGGAAGCCAATGGCCCTTATAAAGAAGCTTCGCAAAGCGAAAAGGGAAGCACCTCCTGGTGAGAAGCCAGAACCCGTCCGAACTCACCTCCGAAATATGATCATTGTCCCAGAGATGATCGGAAGCATTATTGGAGTTTACAGCGGAAAAATCTTCAATCAAGTCGAAATCAAGCCAGAGATGATCGGCCATTACCTAGCAGAGTTCTCCATTTCATACAAGCCTGTGAAGCATGGGAGACCAGGTATCGGTGCTACCCACTCTTCAAGGTTCATTCCTCTTAAGTGAAATCATAGTCACTTTCTTGCTTGCCTAGGTTTGTTATATTTTTACAAGAAACTTGGATTATGTTTACCAGATTTTGTTCCTTGGTTTTCCTTATTGTTCTATTATATCCTTATTCGTACCATGGCAAGCTGGGGCGGTTTAGTTTTTGGTATCTTGTGTTACAGTTAAAATTTTATTCCTACTTGTTTCAACATAATCTAGAGTCTAGACATGGTTGCTTATCAGTTTCGTTTTCAAGCAATGTTACAAAAGTGTTGAGTAACGTTTCAAAAATTTTAAAATTAAAATTTCTTTTTGCAATGTTA

Coding sequence (CDS)

ATGGCGGATGTGGAAGCCGATGTTGCAGTCGCCGGTCAGCCAAAGAAGAGAACGTTCAAGAAGTTCAGCTTCCGCGGCGTCGATTTGGATGCTTTGCTCGACATGTCGACCGATGAGCTCGTCAAGCTTTTCACTGCTCGTGCTCGCAGAAGGTTTCGAAGGGGTTTGACAAGGAAGCCAATGGCCCTTATAAAGAAGCTTCGCAAAGCGAAAAGGGAAGCACCTCCTGGTGAGAAGCCAGAACCCGTCCGAACTCACCTCCGAAATATGATCATTGTCCCAGAGATGATCGGAAGCATTATTGGAGTTTACAGCGGAAAAATCTTCAATCAAGTCGAAATCAAGCCAGAGATGATCGGCCATTACCTAGCAGAGTTCTCCATTTCATACAAGCCTGTGAAGCATGGGAGACCAGGTATCGGTGCTACCCACTCTTCAAGGTTCATTCCTCTTAAGTGA

Protein sequence

MADVEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYSGKIFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Homology
BLAST of Sed0009894 vs. NCBI nr
Match: XP_022930318.1 (40S ribosomal protein S15-4 [Cucurbita moschata] >XP_023000557.1 40S ribosomal protein S15-4 [Cucurbita maxima] >XP_023513952.1 40S ribosomal protein S15-4 [Cucurbita pepo subsp. pepo] >KAG6593857.1 40S ribosomal protein S15, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026189.1 40S ribosomal protein S15 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 298.1 bits (762), Expect = 4.2e-77
Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0

Query: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRKP 60
           MADVEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRKP
Sbjct: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRKP 60

Query: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYSGKIFNQVEIKPEMIG 120
           MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVY+GK FNQVEIKPEMIG
Sbjct: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120

Query: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 152

BLAST of Sed0009894 vs. NCBI nr
Match: XP_022958790.1 (40S ribosomal protein S15-4-like [Cucurbita moschata] >XP_023006761.1 40S ribosomal protein S15-4-like [Cucurbita maxima] >XP_023548520.1 40S ribosomal protein S15-4-like [Cucurbita pepo subsp. pepo] >KAG6574934.1 40S ribosomal protein S15, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013502.1 40S ribosomal protein S15, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 297.0 bits (759), Expect = 9.4e-77
Identity = 149/152 (98.03%), Postives = 151/152 (99.34%), Query Frame = 0

Query: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRKP 60
           MADVEADVAVAGQPKKRTFKKFSFRGVDLD+LLDMSTDELVKLFTARARRRFRRGLTRKP
Sbjct: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDSLLDMSTDELVKLFTARARRRFRRGLTRKP 60

Query: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYSGKIFNQVEIKPEMIG 120
           MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVY+GK FNQVEIKPEMIG
Sbjct: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120

Query: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 152

BLAST of Sed0009894 vs. NCBI nr
Match: XP_030470053.1 (40S ribosomal protein S15-4-like isoform X1 [Syzygium oleosum] >XP_030533959.1 40S ribosomal protein S15-4 isoform X1 [Rhodamnia argentea])

HSP 1 Score: 294.3 bits (752), Expect = 6.1e-76
Identity = 148/152 (97.37%), Postives = 150/152 (98.68%), Query Frame = 0

Query: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRKP 60
           MADVEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRF+RGL RKP
Sbjct: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFQRGLKRKP 60

Query: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYSGKIFNQVEIKPEMIG 120
           MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVY+GK FNQVEIKPEMIG
Sbjct: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120

Query: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 152

BLAST of Sed0009894 vs. NCBI nr
Match: XP_031398922.1 (40S ribosomal protein S15-4-like [Punica granatum] >KAF8014509.1 hypothetical protein BT93_H0350 [Corymbia citriodora subsp. variegata] >PKI61653.1 hypothetical protein CRG98_017965 [Punica granatum])

HSP 1 Score: 292.7 bits (748), Expect = 1.8e-75
Identity = 147/152 (96.71%), Postives = 150/152 (98.68%), Query Frame = 0

Query: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRKP 60
           MA+VEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRF+RGL RKP
Sbjct: 1   MAEVEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFQRGLKRKP 60

Query: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYSGKIFNQVEIKPEMIG 120
           MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVY+GK FNQVEIKPEMIG
Sbjct: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120

Query: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 152

BLAST of Sed0009894 vs. NCBI nr
Match: KAF3452310.1 (hypothetical protein FNV43_RR02743 [Rhamnella rubrinervis])

HSP 1 Score: 292.7 bits (748), Expect = 1.8e-75
Identity = 147/152 (96.71%), Postives = 149/152 (98.03%), Query Frame = 0

Query: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRKP 60
           MADVE DVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRF+RGL RKP
Sbjct: 1   MADVETDVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFQRGLKRKP 60

Query: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYSGKIFNQVEIKPEMIG 120
           MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVY+GK FNQVEIKPEMIG
Sbjct: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120

Query: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 152

BLAST of Sed0009894 vs. ExPASy Swiss-Prot
Match: Q08112 (40S ribosomal protein S15-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15A PE=2 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 1.7e-73
Identity = 137/152 (90.13%), Postives = 145/152 (95.39%), Query Frame = 0

Query: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRKP 60
           MADVE +VA AG PKKRTFKKF+F+GVDLDALLDMSTD+LVKLF++R RRRF RGLTRKP
Sbjct: 1   MADVEPEVAAAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKP 60

Query: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYSGKIFNQVEIKPEMIG 120
           MALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVY+GK FNQVEIKPEMIG
Sbjct: 61  MALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120

Query: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           HYLAEFSISYKPVKHGRPG+GATHSSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGVGATHSSRFIPLK 152

BLAST of Sed0009894 vs. ExPASy Swiss-Prot
Match: Q9FY64 (40S ribosomal protein S15-4 OS=Arabidopsis thaliana OX=3702 GN=RPS15D PE=2 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 1.7e-73
Identity = 137/152 (90.13%), Postives = 145/152 (95.39%), Query Frame = 0

Query: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRKP 60
           MADVE +VA AG PKKRTFKKF+F+GVDLDALLDMSTD+LVKLF++R RRRF RGLTRKP
Sbjct: 1   MADVEPEVAAAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKP 60

Query: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYSGKIFNQVEIKPEMIG 120
           MALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVY+GK FNQVEIKPEMIG
Sbjct: 61  MALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120

Query: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           HYLAEFSISYKPVKHGRPG+GATHSSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGVGATHSSRFIPLK 152

BLAST of Sed0009894 vs. ExPASy Swiss-Prot
Match: Q945U1 (40S ribosomal protein S15 OS=Elaeis oleifera OX=80265 GN=RPS15 PE=2 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 3.6e-71
Identity = 137/153 (89.54%), Postives = 142/153 (92.81%), Query Frame = 0

Query: 1   MADVEADVAVAG-QPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRK 60
           MADV   V V G QPKKRTF+KFS+RGVDLD LLDM TDELVKLF ARARRRF+RGL RK
Sbjct: 1   MADVSDAVDVGGAQPKKRTFRKFSYRGVDLDQLLDMGTDELVKLFHARARRRFQRGLKRK 60

Query: 61  PMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYSGKIFNQVEIKPEMI 120
           PMALIKKLRKAKR+APPGEKPEPVRTHLRNMIIVPEMIGSIIGVY+GK FNQVEIKPEMI
Sbjct: 61  PMALIKKLRKAKRDAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 120

Query: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153

BLAST of Sed0009894 vs. ExPASy Swiss-Prot
Match: P31674 (40S ribosomal protein S15 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS15 PE=2 SV=2)

HSP 1 Score: 266.5 bits (680), Expect = 1.8e-70
Identity = 130/150 (86.67%), Postives = 142/150 (94.67%), Query Frame = 0

Query: 3   DVEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRKPMA 62
           +VE +VA   QPKKRTF+K+S+RGVDLDALLDMSTD+LV+LF ARARRRF+RGL RKPMA
Sbjct: 5   EVETEVAAGAQPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMA 64

Query: 63  LIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYSGKIFNQVEIKPEMIGHY 122
           LIKKLRKAK++AP GEKPEPVRTHLRNMIIVPEMIGSI+GVY+GK FNQVEIKPEMIGHY
Sbjct: 65  LIKKLRKAKKDAPAGEKPEPVRTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHY 124

Query: 123 LAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           LAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 125 LAEFSISYKPVKHGRPGIGATHSSRFIPLK 154

BLAST of Sed0009894 vs. ExPASy Swiss-Prot
Match: O65059 (40S ribosomal protein S15 OS=Picea mariana OX=3335 GN=RPS15 PE=2 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 5.2e-70
Identity = 134/152 (88.16%), Postives = 142/152 (93.42%), Query Frame = 0

Query: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRKP 60
           MAD + DV    QPKKRTFKKFS+RGVDLDALLDM+++ELVKLF ARARRRF+RGL R+P
Sbjct: 1   MADADVDVGPV-QPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARARRRFQRGLKRQP 60

Query: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYSGKIFNQVEIKPEMIG 120
           MALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVY+GK FNQVEIKPEMIG
Sbjct: 61  MALIKKLRKAKREAPSGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120

Query: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 151

BLAST of Sed0009894 vs. ExPASy TrEMBL
Match: A0A6J1KDZ2 (40S ribosomal protein S15-4 OS=Cucurbita maxima OX=3661 GN=LOC111494798 PE=3 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.1e-77
Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0

Query: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRKP 60
           MADVEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRKP
Sbjct: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRKP 60

Query: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYSGKIFNQVEIKPEMIG 120
           MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVY+GK FNQVEIKPEMIG
Sbjct: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120

Query: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 152

BLAST of Sed0009894 vs. ExPASy TrEMBL
Match: A0A6J1EUT1 (40S ribosomal protein S15-4 OS=Cucurbita moschata OX=3662 GN=LOC111436804 PE=3 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.1e-77
Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0

Query: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRKP 60
           MADVEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRKP
Sbjct: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRKP 60

Query: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYSGKIFNQVEIKPEMIG 120
           MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVY+GK FNQVEIKPEMIG
Sbjct: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120

Query: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 152

BLAST of Sed0009894 vs. ExPASy TrEMBL
Match: A0A6J1KYN5 (40S ribosomal protein S15-4-like OS=Cucurbita maxima OX=3661 GN=LOC111499397 PE=3 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 4.6e-77
Identity = 149/152 (98.03%), Postives = 151/152 (99.34%), Query Frame = 0

Query: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRKP 60
           MADVEADVAVAGQPKKRTFKKFSFRGVDLD+LLDMSTDELVKLFTARARRRFRRGLTRKP
Sbjct: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDSLLDMSTDELVKLFTARARRRFRRGLTRKP 60

Query: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYSGKIFNQVEIKPEMIG 120
           MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVY+GK FNQVEIKPEMIG
Sbjct: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120

Query: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 152

BLAST of Sed0009894 vs. ExPASy TrEMBL
Match: A0A6J1H4G4 (40S ribosomal protein S15-4-like OS=Cucurbita moschata OX=3662 GN=LOC111459956 PE=3 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 4.6e-77
Identity = 149/152 (98.03%), Postives = 151/152 (99.34%), Query Frame = 0

Query: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRKP 60
           MADVEADVAVAGQPKKRTFKKFSFRGVDLD+LLDMSTDELVKLFTARARRRFRRGLTRKP
Sbjct: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDSLLDMSTDELVKLFTARARRRFRRGLTRKP 60

Query: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYSGKIFNQVEIKPEMIG 120
           MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVY+GK FNQVEIKPEMIG
Sbjct: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120

Query: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 152

BLAST of Sed0009894 vs. ExPASy TrEMBL
Match: A0A2I0K0Q9 (40S ribosomal protein S15-4-like OS=Punica granatum OX=22663 GN=LOC116209430 PE=3 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 8.6e-76
Identity = 147/152 (96.71%), Postives = 150/152 (98.68%), Query Frame = 0

Query: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRKP 60
           MA+VEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRF+RGL RKP
Sbjct: 1   MAEVEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFQRGLKRKP 60

Query: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYSGKIFNQVEIKPEMIG 120
           MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVY+GK FNQVEIKPEMIG
Sbjct: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120

Query: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 152

BLAST of Sed0009894 vs. TAIR 10
Match: AT1G04270.1 (cytosolic ribosomal protein S15 )

HSP 1 Score: 276.6 bits (706), Expect = 1.2e-74
Identity = 137/152 (90.13%), Postives = 145/152 (95.39%), Query Frame = 0

Query: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRKP 60
           MADVE +VA AG PKKRTFKKF+F+GVDLDALLDMSTD+LVKLF++R RRRF RGLTRKP
Sbjct: 1   MADVEPEVAAAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKP 60

Query: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYSGKIFNQVEIKPEMIG 120
           MALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVY+GK FNQVEIKPEMIG
Sbjct: 61  MALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120

Query: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           HYLAEFSISYKPVKHGRPG+GATHSSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGVGATHSSRFIPLK 152

BLAST of Sed0009894 vs. TAIR 10
Match: AT5G09510.1 (Ribosomal protein S19 family protein )

HSP 1 Score: 276.6 bits (706), Expect = 1.2e-74
Identity = 137/152 (90.13%), Postives = 145/152 (95.39%), Query Frame = 0

Query: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRKP 60
           MADVE +VA AG PKKRTFKKF+F+GVDLDALLDMSTD+LVKLF++R RRRF RGLTRKP
Sbjct: 1   MADVEPEVAAAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKP 60

Query: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYSGKIFNQVEIKPEMIG 120
           MALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVY+GK FNQVEIKPEMIG
Sbjct: 61  MALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120

Query: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           HYLAEFSISYKPVKHGRPG+GATHSSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGVGATHSSRFIPLK 152

BLAST of Sed0009894 vs. TAIR 10
Match: AT1G04270.2 (cytosolic ribosomal protein S15 )

HSP 1 Score: 270.4 bits (690), Expect = 8.8e-73
Identity = 136/152 (89.47%), Postives = 144/152 (94.74%), Query Frame = 0

Query: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRKP 60
           MADVE +VA AG PKKRTFKKF+F+GVDLDALLDMSTD+LVKLF++R RRRF RGLTRKP
Sbjct: 1   MADVEPEVAAAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKP 60

Query: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYSGKIFNQVEIKPEMIG 120
           MALIKKLRK KREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVY+GK FNQVEIKPEMIG
Sbjct: 61  MALIKKLRK-KREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120

Query: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           HYLAEFSISYKPVKHGRPG+GATHSSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGVGATHSSRFIPLK 151

BLAST of Sed0009894 vs. TAIR 10
Match: AT5G09500.1 (Ribosomal protein S19 family protein )

HSP 1 Score: 255.0 bits (650), Expect = 3.8e-68
Identity = 132/152 (86.84%), Postives = 138/152 (90.79%), Query Frame = 0

Query: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRKP 60
           MAD E  VA AG  KKRTFKKFSFRGVDLDALLDMSTD+LVKLF +R RRRF RGLTRKP
Sbjct: 1   MADPE--VAAAGIVKKRTFKKFSFRGVDLDALLDMSTDDLVKLFPSRIRRRFSRGLTRKP 60

Query: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYSGKIFNQVEIKPEMIG 120
           MALIKKLRKAK EAP GEKP  VRTHLRNMIIVPEMIGS+IGVY+GK FNQVEIKPEMIG
Sbjct: 61  MALIKKLRKAKIEAPAGEKPAAVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIG 120

Query: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           HYLAEFSISYKPVKHGRPG+GAT+SSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGVGATNSSRFIPLK 150

BLAST of Sed0009894 vs. TAIR 10
Match: AT5G09490.1 (Ribosomal protein S19 family protein )

HSP 1 Score: 249.6 bits (636), Expect = 1.6e-66
Identity = 123/152 (80.92%), Postives = 137/152 (90.13%), Query Frame = 0

Query: 1   MADVEADVAVAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRKP 60
           MA+VE DV+ A   KKRTFKKFSF+GVDLDALLDM TD+LV+LF +R RRR  RGLTRKP
Sbjct: 1   MAEVEPDVSAAALAKKRTFKKFSFKGVDLDALLDMPTDDLVELFPSRIRRRMSRGLTRKP 60

Query: 61  MALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYSGKIFNQVEIKPEMIG 120
           MALIKKLRKAK +AP GEKPE VRTHLRNM+I+PEMIGSIIGVY+GK FNQ+EIKPEMIG
Sbjct: 61  MALIKKLRKAKLDAPAGEKPEVVRTHLRNMVIMPEMIGSIIGVYNGKTFNQIEIKPEMIG 120

Query: 121 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
           HYLAEFSI+YKPV+HG+PG GATHSSRFIPLK
Sbjct: 121 HYLAEFSITYKPVRHGKPGHGATHSSRFIPLK 152

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022930318.14.2e-7798.6840S ribosomal protein S15-4 [Cucurbita moschata] >XP_023000557.1 40S ribosomal p... [more]
XP_022958790.19.4e-7798.0340S ribosomal protein S15-4-like [Cucurbita moschata] >XP_023006761.1 40S riboso... [more]
XP_030470053.16.1e-7697.3740S ribosomal protein S15-4-like isoform X1 [Syzygium oleosum] >XP_030533959.1 4... [more]
XP_031398922.11.8e-7596.7140S ribosomal protein S15-4-like [Punica granatum] >KAF8014509.1 hypothetical pr... [more]
KAF3452310.11.8e-7596.71hypothetical protein FNV43_RR02743 [Rhamnella rubrinervis][more]
Match NameE-valueIdentityDescription
Q081121.7e-7390.1340S ribosomal protein S15-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15A PE=2 SV=1[more]
Q9FY641.7e-7390.1340S ribosomal protein S15-4 OS=Arabidopsis thaliana OX=3702 GN=RPS15D PE=2 SV=1[more]
Q945U13.6e-7189.5440S ribosomal protein S15 OS=Elaeis oleifera OX=80265 GN=RPS15 PE=2 SV=1[more]
P316741.8e-7086.6740S ribosomal protein S15 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS15 PE=2... [more]
O650595.2e-7088.1640S ribosomal protein S15 OS=Picea mariana OX=3335 GN=RPS15 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1KDZ22.1e-7798.6840S ribosomal protein S15-4 OS=Cucurbita maxima OX=3661 GN=LOC111494798 PE=3 SV=... [more]
A0A6J1EUT12.1e-7798.6840S ribosomal protein S15-4 OS=Cucurbita moschata OX=3662 GN=LOC111436804 PE=3 S... [more]
A0A6J1KYN54.6e-7798.0340S ribosomal protein S15-4-like OS=Cucurbita maxima OX=3661 GN=LOC111499397 PE=... [more]
A0A6J1H4G44.6e-7798.0340S ribosomal protein S15-4-like OS=Cucurbita moschata OX=3662 GN=LOC111459956 P... [more]
A0A2I0K0Q98.6e-7696.7140S ribosomal protein S15-4-like OS=Punica granatum OX=22663 GN=LOC116209430 PE=... [more]
Match NameE-valueIdentityDescription
AT1G04270.11.2e-7490.13cytosolic ribosomal protein S15 [more]
AT5G09510.11.2e-7490.13Ribosomal protein S19 family protein [more]
AT1G04270.28.8e-7389.47cytosolic ribosomal protein S15 [more]
AT5G09500.13.8e-6886.84Ribosomal protein S19 family protein [more]
AT5G09490.11.6e-6680.92Ribosomal protein S19 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002222Ribosomal protein S19/S15PRINTSPR00975RIBOSOMALS19coord: 105..117
score: 34.99
coord: 117..132
score: 46.98
coord: 85..104
score: 46.13
IPR002222Ribosomal protein S19/S15PIRSFPIRSF002144RPS19p_RPS19a_RPS15e_RPS19ocoord: 7..152
e-value: 9.0E-37
score: 122.3
IPR002222Ribosomal protein S19/S15PFAMPF00203Ribosomal_S19coord: 50..135
e-value: 1.5E-31
score: 108.1
IPR002222Ribosomal protein S19/S15PANTHERPTHR11880RIBOSOMAL PROTEIN S19P FAMILY MEMBERcoord: 2..152
IPR002222Ribosomal protein S19/S15HAMAPMF_00531Ribosomal_S19coord: 48..141
score: 20.516111
IPR005713Ribosomal protein S19A/S15eTIGRFAMTIGR01025TIGR01025coord: 19..152
e-value: 2.3E-69
score: 229.4
IPR023575Ribosomal protein S19/S15, superfamilyGENE3D3.30.860.1030s Ribosomal Protein S19; Chain Acoord: 9..152
e-value: 3.1E-71
score: 239.6
IPR023575Ribosomal protein S19/S15, superfamilySUPERFAMILY54570Ribosomal protein S19coord: 55..136
NoneNo IPR availablePANTHERPTHR11880:SF50LOW QUALITY PROTEIN: 40S RIBOSOMAL PROTEIN S15coord: 2..152
IPR020934Ribosomal protein S19 conserved sitePROSITEPS00323RIBOSOMAL_S19coord: 105..129

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0009894.1Sed0009894.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000028 ribosomal small subunit assembly
biological_process GO:0006412 translation
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005840 ribosome
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome