Sed0009791 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCTAATTTACTCCTTTTTATTATTTATTTGTCGCATTTTTCATATAAAATGTGGGTGTTCGATGCCAGTTTCAAACTCACATACCTAAAACCAATCTTGAAAAGGGAAACGAAACAATGGGGTCTCTAAAATTAGCCTCCTATCTTTCATTTCTTCTCATTGCATTTCTGTCTTTAGATTTGCCTTCAACATTGACTGCATATTCTATTCGCTCATCTTCATCCCCCAAGCCTTTTCAATTCAAACCTCCGCTACCGCCGTCTAAAAGACTCACGTTCCCTCCCCCTCCTGGCTGCACGGTGGGTTCACCACCGTCAGCCGAAATAAAGTCTCCACCACTGCCTCCACCGCCGCCCAAGTTTCAATGGCCCAAGAGATTTACCCGTAAATCTCCTCCACCTCCTTTCTAAGGCATTACGAGTGAAGGTAAAAGTGATTGACCTTTTGTTTTGTTTTGTTTTTTAGTACAAATAGGGAGATGGAGACCACAAATTCTATGTAAAGGATATTGCCGCTATCAAATAAATAAAAGTTAAATATCGATTATGAGATCGAACTTATGACCGTGGCTTTGTTCTTTTGGGGAAGATGTCACGTGGGGTTTACTCAATTTGTAACGTTGGATTGAAAATTAAAATGTTTATCACAAAGAGGCTTCGTACTTACCTACCTTATTCTTTTATAAAAATTAATGTATTTCTGACTGAGCAATACTTGGTACATCCTAAACAATTTTATAAAGAGAGTTATCTGACATATTATAGATGCATGTTATGAG TTCTAATTTACTCCTTTTTATTATTTATTTGTCGCATTTTTCATATAAAATGTGGGTGTTCGATGCCAGTTTCAAACTCACATACCTAAAACCAATCTTGAAAAGGGAAACGAAACAATGGGGTCTCTAAAATTAGCCTCCTATCTTTCATTTCTTCTCATTGCATTTCTGTCTTTAGATTTGCCTTCAACATTGACTGCATATTCTATTCGCTCATCTTCATCCCCCAAGCCTTTTCAATTCAAACCTCCGCTACCGCCGTCTAAAAGACTCACGTTCCCTCCCCCTCCTGGCTGCACGGTGGGTTCACCACCGTCAGCCGAAATAAAGTCTCCACCACTGCCTCCACCGCCGCCCAAGTTTCAATGGCCCAAGAGATTTACCCGTAAATCTCCTCCACCTCCTTTCTAAGGCATTACGAGTGAAGGTAAAAGTGATTGACCTTTTGTTTTGTTTTGTTTTTTAGTACAAATAGGGAGATGGAGACCACAAATTCTATGTAAAGGATATTGCCGCTATCAAATAAATAAAAGTTAAATATCGATTATGAGATCGAACTTATGACCGTGGCTTTGTTCTTTTGGGGAAGATGTCACGTGGGGTTTACTCAATTTGTAACGTTGGATTGAAAATTAAAATGTTTATCACAAAGAGGCTTCGTACTTACCTACCTTATTCTTTTATAAAAATTAATGTATTTCTGACTGAGCAATACTTGGTACATCCTAAACAATTTTATAAAGAGAGTTATCTGACATATTATAGATGCATGTTATGAG ATGGGGTCTCTAAAATTAGCCTCCTATCTTTCATTTCTTCTCATTGCATTTCTGTCTTTAGATTTGCCTTCAACATTGACTGCATATTCTATTCGCTCATCTTCATCCCCCAAGCCTTTTCAATTCAAACCTCCGCTACCGCCGTCTAAAAGACTCACGTTCCCTCCCCCTCCTGGCTGCACGGTGGGTTCACCACCGTCAGCCGAAATAAAGTCTCCACCACTGCCTCCACCGCCGCCCAAGTTTCAATGGCCCAAGAGATTTACCCGTAAATCTCCTCCACCTCCTTTCTAA MGSLKLASYLSFLLIAFLSLDLPSTLTAYSIRSSSSPKPFQFKPPLPPSKRLTFPPPPGCTVGSPPSAEIKSPPLPPPPPKFQWPKRFTRKSPPPPF Homology
BLAST of Sed0009791 vs. NCBI nr
Match: KAA0058957.1 (hypothetical protein E6C27_scaffold98G001420 [Cucumis melo var. makuwa] >TYK10990.1 hypothetical protein E5676_scaffold874G00250 [Cucumis melo var. makuwa]) HSP 1 Score: 72.4 bits (176), Expect = 2.4e-09 Identity = 54/103 (52.43%), Postives = 65/103 (63.11%), Query Frame = 0
BLAST of Sed0009791 vs. NCBI nr
Match: XP_023551507.1 (extensin-3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 67.8 bits (164), Expect = 5.9e-08 Identity = 52/104 (50.00%), Postives = 62/104 (59.62%), Query Frame = 0
BLAST of Sed0009791 vs. NCBI nr
Match: XP_022993352.1 (extensin-like [Cucurbita maxima]) HSP 1 Score: 64.7 bits (156), Expect = 5.0e-07 Identity = 52/104 (50.00%), Postives = 64/104 (61.54%), Query Frame = 0
BLAST of Sed0009791 vs. NCBI nr
Match: TYK29731.1 (hypothetical protein E5676_scaffold63236G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 64.3 bits (155), Expect = 6.6e-07 Identity = 57/140 (40.71%), Postives = 65/140 (46.43%), Query Frame = 0
BLAST of Sed0009791 vs. NCBI nr
Match: XP_022939147.1 (extensin-like [Cucurbita moschata]) HSP 1 Score: 64.3 bits (155), Expect = 6.6e-07 Identity = 54/110 (49.09%), Postives = 63/110 (57.27%), Query Frame = 0
BLAST of Sed0009791 vs. ExPASy TrEMBL
Match: A0A0A0KI69 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G336260 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 5.6e-12 Identity = 55/102 (53.92%), Postives = 66/102 (64.71%), Query Frame = 0
BLAST of Sed0009791 vs. ExPASy TrEMBL
Match: A0A5A7UW72 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold874G00250 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 1.2e-09 Identity = 54/103 (52.43%), Postives = 65/103 (63.11%), Query Frame = 0
BLAST of Sed0009791 vs. ExPASy TrEMBL
Match: A0A6J1JSJ5 (extensin-like OS=Cucurbita maxima OX=3661 GN=LOC111489394 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 2.4e-07 Identity = 52/104 (50.00%), Postives = 64/104 (61.54%), Query Frame = 0
BLAST of Sed0009791 vs. ExPASy TrEMBL
Match: A0A5D3E2A1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold63236G00010 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 3.2e-07 Identity = 57/140 (40.71%), Postives = 65/140 (46.43%), Query Frame = 0
BLAST of Sed0009791 vs. ExPASy TrEMBL
Match: A0A6J1FFZ9 (extensin-like OS=Cucurbita moschata OX=3662 GN=LOC111445143 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 3.2e-07 Identity = 54/110 (49.09%), Postives = 63/110 (57.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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