Sed0009664 (gene) Chayote v1

Overview
NameSed0009664
Typegene
OrganismSechium edule (Chayote v1)
Descriptiontranscription factor TCP3-like
LocationLG05: 41826115 .. 41827332 (+)
RNA-Seq ExpressionSed0009664
SyntenySed0009664
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCACTTTACTTTTTGGGATCATCAAAAACCCAAAACCCATAACCTAAAACTGGAATTCAACTAACTTTAATGGAGAACAAGCCATGGATTTTGTAGAACATGCAAGACCAAGACCCATTATCGGAATGAAGAGTGTCGCCGGAGCTGAGATTTTACGGGTCCCCGGCGGCGGCGCTTTCGTTGTCCGATCCACCGGCCGGAAAGACCGCCACAGCAAAGTCTCCACCGCTAAAGGCCTCCGAGACCGCCGTGTTCGTTTATCCGCTCACACCGCCATTCAATTCTACGACGTTCAAGACCGATTGGGCTATGATCGGCCCAGTAAGGCTGTGGATTGGCTAATCAGAAAAGCTAAATCCGCCATTGATAAGCTCTCCGAGCTTCCTAATCCAGTTACTCAAACAGCCCCAAATGGAATTGAATCTGGGTATATTAATGATTTCTTGTTTCAGAGCCAATTGGGTGAGAATTTGACTCCGCCGGCGTTGGATTCCGCCGGAGATTTTCAGAGCTACCGGGATCTAGGCTTGTCGCTTCAGACCCAGAATTACGCCGCCGGTTCTGGAAATTCTGGCCTCGAATTCGACGGTGGGTTTGAGAGAATTGTAGCCTGGACCGGCAATGACTTCGGTTCGCAGCCGATTTTCAAACGAATCTCCGCCGCGTCTCCTCTGAGGGGGCCCCTTCAGTCCAGCCTTGAATCTCCGGTGGCGCATTATGCTTGGAATGATCTCGCCGTCGCCACCGCCGGAAAACGCCATCCGATTTCGATTCCCCATTTTGTTTCCGGCGGGTTGCCTCATCTTGACGTCAGTGGACGGTTTCAGAACGACGGCGACGGCGACGGCGACGGTGGGAAAGTGTCGTTTGGTTCTTCTTCGTTTTCTGGCCGATGATTCGCCGGAACTTGATTCTCTGAATCGGATTTTTCTGATTCGAAGTTTGTACTCTGTTCTTCTCTGAAACGAATATTCCGGCGGGGGAATTCGGATTTTCCAGGCGGTTTCGATTTTCAGGTATTGTATTTTATATTTCGGTTTTTTTTTGTTCGCGGCGTGGATTTTGAGTTGGGATGAAAAATTCACGATGGCGAAATTGAGGAAGAAGATGAATATTATGATCTCCATTGTAATGTTTTTGTGTTTTGTTTTTCTATAAACTTTGACTTTGAGTTTGATTTTCTAATGTACCTTTTTTTTCTTTTCTTTTTGACAACAG

mRNA sequence

CCACTTTACTTTTTGGGATCATCAAAAACCCAAAACCCATAACCTAAAACTGGAATTCAACTAACTTTAATGGAGAACAAGCCATGGATTTTGTAGAACATGCAAGACCAAGACCCATTATCGGAATGAAGAGTGTCGCCGGAGCTGAGATTTTACGGGTCCCCGGCGGCGGCGCTTTCGTTGTCCGATCCACCGGCCGGAAAGACCGCCACAGCAAAGTCTCCACCGCTAAAGGCCTCCGAGACCGCCGTGTTCGTTTATCCGCTCACACCGCCATTCAATTCTACGACGTTCAAGACCGATTGGGCTATGATCGGCCCAGTAAGGCTGTGGATTGGCTAATCAGAAAAGCTAAATCCGCCATTGATAAGCTCTCCGAGCTTCCTAATCCAGTTACTCAAACAGCCCCAAATGGAATTGAATCTGGGTATATTAATGATTTCTTGTTTCAGAGCCAATTGGGTGAGAATTTGACTCCGCCGGCGTTGGATTCCGCCGGAGATTTTCAGAGCTACCGGGATCTAGGCTTGTCGCTTCAGACCCAGAATTACGCCGCCGGTTCTGGAAATTCTGGCCTCGAATTCGACGGTGGGTTTGAGAGAATTGTAGCCTGGACCGGCAATGACTTCGGTTCGCAGCCGATTTTCAAACGAATCTCCGCCGCGTCTCCTCTGAGGGGGCCCCTTCAGTCCAGCCTTGAATCTCCGGTGGCGCATTATGCTTGGAATGATCTCGCCGTCGCCACCGCCGGAAAACGCCATCCGATTTCGATTCCCCATTTTGTTTCCGGCGGGTTGCCTCATCTTGACGTCAGTGGACGGTTTCAGAACGACGGCGACGGCGACGGCGACGGTGGGAAAGTGTCGTTTGGTTCTTCTTCGTTTTCTGGCCGATGATTCGCCGGAACTTGATTCTCTGAATCGGATTTTTCTGATTCGAAGTTTGTACTCTGTTCTTCTCTGAAACGAATATTCCGGCGGGGGAATTCGGATTTTCCAGGCGGTTTCGATTTTCAGGTATTGTATTTTATATTTCGGTTTTTTTTTGTTCGCGGCGTGGATTTTGAGTTGGGATGAAAAATTCACGATGGCGAAATTGAGGAAGAAGATGAATATTATGATCTCCATTGTAATGTTTTTGTGTTTTGTTTTTCTATAAACTTTGACTTTGAGTTTGATTTTCTAATGTACCTTTTTTTTCTTTTCTTTTTGACAACAG

Coding sequence (CDS)

ATGGATTTTGTAGAACATGCAAGACCAAGACCCATTATCGGAATGAAGAGTGTCGCCGGAGCTGAGATTTTACGGGTCCCCGGCGGCGGCGCTTTCGTTGTCCGATCCACCGGCCGGAAAGACCGCCACAGCAAAGTCTCCACCGCTAAAGGCCTCCGAGACCGCCGTGTTCGTTTATCCGCTCACACCGCCATTCAATTCTACGACGTTCAAGACCGATTGGGCTATGATCGGCCCAGTAAGGCTGTGGATTGGCTAATCAGAAAAGCTAAATCCGCCATTGATAAGCTCTCCGAGCTTCCTAATCCAGTTACTCAAACAGCCCCAAATGGAATTGAATCTGGGTATATTAATGATTTCTTGTTTCAGAGCCAATTGGGTGAGAATTTGACTCCGCCGGCGTTGGATTCCGCCGGAGATTTTCAGAGCTACCGGGATCTAGGCTTGTCGCTTCAGACCCAGAATTACGCCGCCGGTTCTGGAAATTCTGGCCTCGAATTCGACGGTGGGTTTGAGAGAATTGTAGCCTGGACCGGCAATGACTTCGGTTCGCAGCCGATTTTCAAACGAATCTCCGCCGCGTCTCCTCTGAGGGGGCCCCTTCAGTCCAGCCTTGAATCTCCGGTGGCGCATTATGCTTGGAATGATCTCGCCGTCGCCACCGCCGGAAAACGCCATCCGATTTCGATTCCCCATTTTGTTTCCGGCGGGTTGCCTCATCTTGACGTCAGTGGACGGTTTCAGAACGACGGCGACGGCGACGGCGACGGTGGGAAAGTGTCGTTTGGTTCTTCTTCGTTTTCTGGCCGATGA

Protein sequence

MDFVEHARPRPIIGMKSVAGAEILRVPGGGAFVVRSTGRKDRHSKVSTAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIRKAKSAIDKLSELPNPVTQTAPNGIESGYINDFLFQSQLGENLTPPALDSAGDFQSYRDLGLSLQTQNYAAGSGNSGLEFDGGFERIVAWTGNDFGSQPIFKRISAASPLRGPLQSSLESPVAHYAWNDLAVATAGKRHPISIPHFVSGGLPHLDVSGRFQNDGDGDGDGGKVSFGSSSFSGR
Homology
[Close]
BLAST of Sed0009664 vs. NCBI nr
Match: XP_023533212.1 (transcription factor TCP3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 357.1 bits (915), Expect = 1.4e-94
Identity = 195/295 (66.10%), Postives = 215/295 (72.88%), Query Frame = 0 

Query: 4   VEHARPRPIIGMKSVAGAEILRVPGG--GAFVVRSTGRKDRHSKVSTAKGLRDRRVRLSA 63
           +   R RP +GM+S++G EIL+VPGG  G  +VR+TGRKDRHSKV TAKGLRDRRVRLSA
Sbjct: 15  LHQGRRRPRMGMQSISGGEILQVPGGGCGGVIVRATGRKDRHSKVFTAKGLRDRRVRLSA 74

Query: 64  HTAIQFYDVQDRLGYDRPSKAVDWLIRKAKSAIDKLSELPNPVTQTAPNGI-------ES 123
           HTAIQFYDVQDRLGYDRPSKAVDWLI+KAKSAID LS LP   ++  PNG        ES
Sbjct: 75  HTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDSLSHLPPCPSEPDPNGTGGVTEHSES 134

Query: 124 GYINDFLFQSQLGENLTPPALDSAGDFQSYRDLGLSLQTQN-----------YAAGSGNS 183
              NDFLFQSQLGENL PP LDSA  FQSY++LGLSLQTQN           YAAGSGNS
Sbjct: 135 SRYNDFLFQSQLGENLIPPPLDSAAGFQSYQNLGLSLQTQNSPHHDQNQTGLYAAGSGNS 194

Query: 184 GLEFDGGFERIVAWTGNDFGSQPIFKRISAASPLRGPLQSSLESPVAHYAWNDLAVATAG 243
           GL F+ GFE+IVAW  N FGS P F + SAA PLRGPLQSSLESPV HYAWN+LAV   G
Sbjct: 195 GLGFEDGFEKIVAWNSNVFGSHPSFSQCSAAFPLRGPLQSSLESPVPHYAWNELAVEPTG 254

Query: 244 KRHPI--------SIPHFVSGGLPHLDVSGRFQNDGDGDGDGGKVSFGSSSFSGR 271
           KRHPI        S P F+SGGLPHLDV GRFQ+      DGGKV   SS +S R
Sbjct: 255 KRHPIPVHDNSSPSSPRFISGGLPHLDVHGRFQS------DGGKVPSHSSLYSRR 303

[Close]
BLAST of Sed0009664 vs. NCBI nr
Match: XP_022970749.1 (transcription factor TCP3-like [Cucurbita maxima])

HSP 1 Score: 355.9 bits (912), Expect = 3.0e-94
Identity = 194/295 (65.76%), Postives = 215/295 (72.88%), Query Frame = 0 

Query: 4   VEHARPRPIIGMKSVAGAEILRVPGG--GAFVVRSTGRKDRHSKVSTAKGLRDRRVRLSA 63
           ++HAR RP +GM+S+ G EIL+VPGG  G  +VR+TGRKDRHSKV TAKGLRDRRVRLSA
Sbjct: 15  LQHARRRPRMGMQSIGGGEILQVPGGGCGGVIVRATGRKDRHSKVFTAKGLRDRRVRLSA 74

Query: 64  HTAIQFYDVQDRLGYDRPSKAVDWLIRKAKSAIDKLSELPNPVTQTAPNGI-------ES 123
           HTAIQFYDVQDRLGYDRPSKAVDWLI+KAKSAID LS LP   ++  PNG        ES
Sbjct: 75  HTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDNLSHLPPCPSEPDPNGTGGVTEHSES 134

Query: 124 GYINDFLFQSQLGENLTPPALDSAGDFQSYRDLGLSLQTQN-----------YAAGSGNS 183
              ++FLFQS LGENL PP LDS   FQSY++LGLSLQTQN           YAAGSGNS
Sbjct: 135 SRYSEFLFQSHLGENLIPPPLDSTAGFQSYQNLGLSLQTQNSPHHDQNQTGLYAAGSGNS 194

Query: 184 GLEFDGGFERIVAWTGNDFGSQPIFKRISAASPLRGPLQSSLESPVAHYAWNDLAVATAG 243
           GL FD GFE+IVAW  N FGS P F + SAA PLRGPLQSSLESPV HYAWN+LAV  AG
Sbjct: 195 GLGFDDGFEKIVAWNSNVFGSHPSFSQCSAAFPLRGPLQSSLESPVPHYAWNELAVDPAG 254

Query: 244 KRHPISI--------PHFVSGGLPHLDVSGRFQNDGDGDGDGGKVSFGSSSFSGR 271
           KRHPI I        P F+S GLPHLDV GRFQ+      DGGKV   SS +S R
Sbjct: 255 KRHPIPIHDNSSPSSPRFISSGLPHLDVHGRFQS------DGGKVPSHSSLYSRR 303

[Close]
BLAST of Sed0009664 vs. NCBI nr
Match: XP_022947877.1 (transcription factor TCP3-like [Cucurbita moschata])

HSP 1 Score: 354.4 bits (908), Expect = 8.9e-94
Identity = 194/295 (65.76%), Postives = 214/295 (72.54%), Query Frame = 0 

Query: 4   VEHARPRPIIGMKSVAGAEILRVPGG--GAFVVRSTGRKDRHSKVSTAKGLRDRRVRLSA 63
           +   R RP +GM+S++G EIL+VPGG  G  +VR+TGRKDRHSKV TAKGLRDRRVRLSA
Sbjct: 15  LHQGRRRPRMGMQSISGGEILQVPGGGCGGVIVRATGRKDRHSKVFTAKGLRDRRVRLSA 74

Query: 64  HTAIQFYDVQDRLGYDRPSKAVDWLIRKAKSAIDKLSELPNPVTQTAPNGI-------ES 123
           HTAIQFYDVQDRLGYDRPSKAVDWLI+KAKSAID LS LP   ++  PNG        ES
Sbjct: 75  HTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDNLSHLPPCPSEPDPNGTGGVTEHSES 134

Query: 124 GYINDFLFQSQLGENLTPPALDSAGDFQSYRDLGLSLQTQN-----------YAAGSGNS 183
              NDFLFQSQLGENL PP LDSA  FQSY++LGLSLQTQN           YAAGSGNS
Sbjct: 135 SRYNDFLFQSQLGENLIPPPLDSAAGFQSYQNLGLSLQTQNSPHHDQNQTGLYAAGSGNS 194

Query: 184 GLEFDGGFERIVAWTGNDFGSQPIFKRISAASPLRGPLQSSLESPVAHYAWNDLAVATAG 243
            L F+ GFE+IVAW  N FGS P F + SAA PLRGPLQSSLESPV HYAWN+LAV   G
Sbjct: 195 DLGFEDGFEKIVAWNSNVFGSHPSFSQSSAAFPLRGPLQSSLESPVPHYAWNELAVEPTG 254

Query: 244 KRHPISI--------PHFVSGGLPHLDVSGRFQNDGDGDGDGGKVSFGSSSFSGR 271
           KRHPI I        P F+SGGLPHLDV GRFQ+      DGGKV   SS +S R
Sbjct: 255 KRHPIPIHDNSSPSSPRFISGGLPHLDVHGRFQS------DGGKVPSHSSLYSRR 303

[Close]
BLAST of Sed0009664 vs. NCBI nr
Match: KAG7034889.1 (Transcription factor TCP4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 354.4 bits (908), Expect = 8.9e-94
Identity = 194/295 (65.76%), Postives = 213/295 (72.20%), Query Frame = 0 

Query: 4   VEHARPRPIIGMKSVAGAEILRVPGG--GAFVVRSTGRKDRHSKVSTAKGLRDRRVRLSA 63
           +   R RP +GM+S+ G EIL+VPGG  G  +VR+TGRKDRHSKV TAKGLRDRRVRLSA
Sbjct: 15  LHQGRRRPRMGMQSIGGGEILQVPGGGCGGVIVRATGRKDRHSKVFTAKGLRDRRVRLSA 74

Query: 64  HTAIQFYDVQDRLGYDRPSKAVDWLIRKAKSAIDKLSELPNPVTQTAPNGI-------ES 123
           HTAIQFYDVQDRLGYDRPSKAVDWLI+KAKSAID LS LP   ++  PNG        ES
Sbjct: 75  HTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDNLSHLPPCPSEPDPNGTGGVTEHSES 134

Query: 124 GYINDFLFQSQLGENLTPPALDSAGDFQSYRDLGLSLQTQN-----------YAAGSGNS 183
              NDFLFQSQLGENL PP LDSA  FQSY++LGLSLQTQN           YAAGSGNS
Sbjct: 135 SRYNDFLFQSQLGENLIPPPLDSAAGFQSYQNLGLSLQTQNSPHHDQNQTGLYAAGSGNS 194

Query: 184 GLEFDGGFERIVAWTGNDFGSQPIFKRISAASPLRGPLQSSLESPVAHYAWNDLAVATAG 243
            L F+ GFE+IVAW  N FGS P F + SAA PLRGPLQSSLESPV HYAWN+LAV   G
Sbjct: 195 DLGFEDGFEKIVAWNSNVFGSHPSFSQCSAAFPLRGPLQSSLESPVPHYAWNELAVEPTG 254

Query: 244 KRHPISI--------PHFVSGGLPHLDVSGRFQNDGDGDGDGGKVSFGSSSFSGR 271
           KRHPI I        P F+SGGLPHLDV GRFQ+      DGGKV   SS +S R
Sbjct: 255 KRHPIPIHDNSSPSSPRFISGGLPHLDVHGRFQS------DGGKVPSHSSLYSRR 303

[Close]
BLAST of Sed0009664 vs. NCBI nr
Match: KAG6604760.1 (Transcription factor TCP4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 344.4 bits (882), Expect = 9.2e-91
Identity = 183/271 (67.53%), Postives = 200/271 (73.80%), Query Frame = 0 

Query: 4   VEHARPRPIIGMKSVAGAEILRVPGG--GAFVVRSTGRKDRHSKVSTAKGLRDRRVRLSA 63
           +   R RP +GM+S+ G EIL+VPGG  G  +VR+TGRKDRHSKV TAKGLRDRRVRLSA
Sbjct: 15  LHQGRRRPRMGMQSIGGGEILQVPGGGCGGVIVRATGRKDRHSKVFTAKGLRDRRVRLSA 74

Query: 64  HTAIQFYDVQDRLGYDRPSKAVDWLIRKAKSAIDKLSELPNPVTQTAPNGI-------ES 123
           HTAIQFYDVQDRLGYDRPSKAVDWLI+KAKSAID LS LP   ++  PNG        ES
Sbjct: 75  HTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDNLSHLPPCPSEPDPNGTGGVTEHSES 134

Query: 124 GYINDFLFQSQLGENLTPPALDSAGDFQSYRDLGLSLQTQN-----------YAAGSGNS 183
              NDFLFQSQLGENL PP LDSA  FQSY++LGLSLQTQN           YAAGSGNS
Sbjct: 135 SRYNDFLFQSQLGENLIPPPLDSAAGFQSYQNLGLSLQTQNSPHHDQNQTGLYAAGSGNS 194

Query: 184 GLEFDGGFERIVAWTGNDFGSQPIFKRISAASPLRGPLQSSLESPVAHYAWNDLAVATAG 243
            L F+ GFE+IVAW  N FGS P F + SAA PLRGPLQSSLESPV HYAWN+LAV   G
Sbjct: 195 DLGFEDGFEKIVAWNSNVFGSHPSFSQCSAAFPLRGPLQSSLESPVPHYAWNELAVEPTG 254

Query: 244 KRHPISI--------PHFVSGGLPHLDVSGR 247
           KRHPI I        P F+SGGLPHLDV GR
Sbjct: 255 KRHPIPIHDNSSPSSPRFISGGLPHLDVHGR 285

[Close]
BLAST of Sed0009664 vs. ExPASy Swiss-Prot
Match: A2WM14 (Transcription factor PCF5 OS=Oryza sativa subsp. indica OX=39946 GN=PCF5 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.6e-29
Identity = 94/225 (41.78%), Postives = 118/225 (52.44%), Query Frame = 0 

Query: 20  GAEILRVPGGGAFVVRSTGRKDRHSKVSTAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRP 79
           G EI+ V GG   +VRSTGRKDRHSKV TA+G RDRRVRLSAHTAIQFYDVQDRLGYDRP
Sbjct: 196 GGEIVAVQGG--HIVRSTGRKDRHSKVCTARGPRDRRVRLSAHTAIQFYDVQDRLGYDRP 255

Query: 80  SKAVDWLIRKAKSAIDKLSELP----------------NPVTQTAPNGIESG-------- 139
           SKAVDWLI+ AK AIDKL  LP                 P + T P+  E+         
Sbjct: 256 SKAVDWLIKNAKDAIDKLDVLPAWQPTAGGAGAGNAAAPPSSSTHPDSAENSDDQAQAIT 315

Query: 140 ---YINDFLFQSQLGENLTPPALDS---AGDFQSYRDLGLSL--QTQNYAAGSGNSGLEF 199
                 DF      G +  PP+LDS   A   +S+  +G +   +  +    + +S + F
Sbjct: 316 VAHTAFDFAGGGSGGTSFLPPSLDSDAIADTIKSFFPMGGTAGGEASSSTTAAQSSAMGF 375

Query: 200 DGGFERIVAWTGNDFGSQPIFKRISAASPLRGPLQSSLESPVAHY 213
                 +++ TG            S +  LR  LQ SL  P+ H+
Sbjct: 376 QSYTPDLLSRTG------------SQSQELRLSLQ-SLPDPMFHH 405

[Close]
BLAST of Sed0009664 vs. ExPASy Swiss-Prot
Match: Q8LT07 (Transcription factor PCF5 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF5 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.6e-29
Identity = 94/225 (41.78%), Postives = 118/225 (52.44%), Query Frame = 0 

Query: 20  GAEILRVPGGGAFVVRSTGRKDRHSKVSTAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRP 79
           G EI+ V GG   +VRSTGRKDRHSKV TA+G RDRRVRLSAHTAIQFYDVQDRLGYDRP
Sbjct: 72  GGEIVAVQGG--HIVRSTGRKDRHSKVCTARGPRDRRVRLSAHTAIQFYDVQDRLGYDRP 131

Query: 80  SKAVDWLIRKAKSAIDKLSELP----------------NPVTQTAPNGIESG-------- 139
           SKAVDWLI+ AK AIDKL  LP                 P + T P+  E+         
Sbjct: 132 SKAVDWLIKNAKDAIDKLDVLPAWQPTAGGAGAGNAAAPPSSSTHPDSAENSDDQAQAIT 191

Query: 140 ---YINDFLFQSQLGENLTPPALDS---AGDFQSYRDLGLSL--QTQNYAAGSGNSGLEF 199
                 DF      G +  PP+LDS   A   +S+  +G +   +  +    + +S + F
Sbjct: 192 VAHTAFDFAGGGSGGTSFLPPSLDSDAIADTIKSFFPMGGTAGGEASSSTTAAQSSAMGF 251

Query: 200 DGGFERIVAWTGNDFGSQPIFKRISAASPLRGPLQSSLESPVAHY 213
                 +++ TG            S +  LR  LQ SL  P+ H+
Sbjct: 252 QSYTPDLLSRTG------------SQSQELRLSLQ-SLPDPMFHH 281

[Close]
BLAST of Sed0009664 vs. ExPASy Swiss-Prot
Match: Q8LPR5 (Transcription factor TCP4 OS=Arabidopsis thaliana OX=3702 GN=TCP4 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.6e-29
Identity = 65/80 (81.25%), Postives = 73/80 (91.25%), Query Frame = 0 

Query: 22  EILRVPGGGAFVVRSTGRKDRHSKVSTAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSK 81
           EI+ V GG   +VRSTGRKDRHSKV TAKG RDRRVRLSAHTAIQFYDVQDRLG+DRPSK
Sbjct: 30  EIVEVQGG--HIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSK 89

Query: 82  AVDWLIRKAKSAIDKLSELP 102
           AVDWLI+KAK++ID+L+ELP
Sbjct: 90  AVDWLIKKAKTSIDELAELP 107

[Close]
BLAST of Sed0009664 vs. ExPASy Swiss-Prot
Match: O82277 (Transcription factor TCP10 OS=Arabidopsis thaliana OX=3702 GN=TCP10 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.4e-28
Identity = 67/88 (76.14%), Postives = 74/88 (84.09%), Query Frame = 0 

Query: 20  GAEILRVPGGGAFVVRSTGRKDRHSKVSTAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRP 79
           G EI+ V GG   ++R+TGRKDRHSKV T+KG RDRRVRLSAHTAIQFYDVQDRLGYDRP
Sbjct: 12  GGEIVEVQGG--HIIRATGRKDRHSKVFTSKGPRDRRVRLSAHTAIQFYDVQDRLGYDRP 71

Query: 80  SKAVDWLIRKAKSAIDKLSELPNPVTQT 108
           SKAVDWLI+KAK+AIDKL EL    T T
Sbjct: 72  SKAVDWLIKKAKTAIDKL-ELGETTTTT 96

[Close]
BLAST of Sed0009664 vs. ExPASy Swiss-Prot
Match: A2WV68 (Transcription factor PCF7 OS=Oryza sativa subsp. indica OX=39946 GN=PCF7 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 3.0e-28
Identity = 75/152 (49.34%), Postives = 92/152 (60.53%), Query Frame = 0 

Query: 28  GGGAFVVRSTGRKDRHSKVSTAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLI 87
           G G  V  + GRKDRHSKV TA+GLRDRRVRL+AHTAI+FYDVQDRLGYDRPSKAVDWL+
Sbjct: 129 GAGRIVRSAAGRKDRHSKVCTARGLRDRRVRLAAHTAIRFYDVQDRLGYDRPSKAVDWLM 188

Query: 88  RKAKSAIDKL---SELPNP---VTQTAPNGIESGYINDFLFQSQLGENLTPPALDSAGDF 147
           R AK+AID+L   +E P P    +   P G E      + F +  G  +T  A  +AG F
Sbjct: 189 RNAKAAIDELPDRAEAPPPPAAASTEQPEGTEQANSTSYGFGNTTGGTMTSAASAAAGSF 248

Query: 148 -----------QSYRDLGLSLQTQNYAAGSGN 163
                       S + L  S  T + AA +G+
Sbjct: 249 LPHSLGADRVSDSVKSLFPSSSTASGAASAGH 280

[Close]
BLAST of Sed0009664 vs. ExPASy TrEMBL
Match: A0A6J1I6J3 (transcription factor TCP3-like OS=Cucurbita maxima OX=3661 GN=LOC111469647 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.5e-94
Identity = 194/295 (65.76%), Postives = 215/295 (72.88%), Query Frame = 0 

Query: 4   VEHARPRPIIGMKSVAGAEILRVPGG--GAFVVRSTGRKDRHSKVSTAKGLRDRRVRLSA 63
           ++HAR RP +GM+S+ G EIL+VPGG  G  +VR+TGRKDRHSKV TAKGLRDRRVRLSA
Sbjct: 15  LQHARRRPRMGMQSIGGGEILQVPGGGCGGVIVRATGRKDRHSKVFTAKGLRDRRVRLSA 74

Query: 64  HTAIQFYDVQDRLGYDRPSKAVDWLIRKAKSAIDKLSELPNPVTQTAPNGI-------ES 123
           HTAIQFYDVQDRLGYDRPSKAVDWLI+KAKSAID LS LP   ++  PNG        ES
Sbjct: 75  HTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDNLSHLPPCPSEPDPNGTGGVTEHSES 134

Query: 124 GYINDFLFQSQLGENLTPPALDSAGDFQSYRDLGLSLQTQN-----------YAAGSGNS 183
              ++FLFQS LGENL PP LDS   FQSY++LGLSLQTQN           YAAGSGNS
Sbjct: 135 SRYSEFLFQSHLGENLIPPPLDSTAGFQSYQNLGLSLQTQNSPHHDQNQTGLYAAGSGNS 194

Query: 184 GLEFDGGFERIVAWTGNDFGSQPIFKRISAASPLRGPLQSSLESPVAHYAWNDLAVATAG 243
           GL FD GFE+IVAW  N FGS P F + SAA PLRGPLQSSLESPV HYAWN+LAV  AG
Sbjct: 195 GLGFDDGFEKIVAWNSNVFGSHPSFSQCSAAFPLRGPLQSSLESPVPHYAWNELAVDPAG 254

Query: 244 KRHPISI--------PHFVSGGLPHLDVSGRFQNDGDGDGDGGKVSFGSSSFSGR 271
           KRHPI I        P F+S GLPHLDV GRFQ+      DGGKV   SS +S R
Sbjct: 255 KRHPIPIHDNSSPSSPRFISSGLPHLDVHGRFQS------DGGKVPSHSSLYSRR 303

[Close]
BLAST of Sed0009664 vs. ExPASy TrEMBL
Match: A0A6J1G7M2 (transcription factor TCP3-like OS=Cucurbita moschata OX=3662 GN=LOC111451636 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 4.3e-94
Identity = 194/295 (65.76%), Postives = 214/295 (72.54%), Query Frame = 0 

Query: 4   VEHARPRPIIGMKSVAGAEILRVPGG--GAFVVRSTGRKDRHSKVSTAKGLRDRRVRLSA 63
           +   R RP +GM+S++G EIL+VPGG  G  +VR+TGRKDRHSKV TAKGLRDRRVRLSA
Sbjct: 15  LHQGRRRPRMGMQSISGGEILQVPGGGCGGVIVRATGRKDRHSKVFTAKGLRDRRVRLSA 74

Query: 64  HTAIQFYDVQDRLGYDRPSKAVDWLIRKAKSAIDKLSELPNPVTQTAPNGI-------ES 123
           HTAIQFYDVQDRLGYDRPSKAVDWLI+KAKSAID LS LP   ++  PNG        ES
Sbjct: 75  HTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDNLSHLPPCPSEPDPNGTGGVTEHSES 134

Query: 124 GYINDFLFQSQLGENLTPPALDSAGDFQSYRDLGLSLQTQN-----------YAAGSGNS 183
              NDFLFQSQLGENL PP LDSA  FQSY++LGLSLQTQN           YAAGSGNS
Sbjct: 135 SRYNDFLFQSQLGENLIPPPLDSAAGFQSYQNLGLSLQTQNSPHHDQNQTGLYAAGSGNS 194

Query: 184 GLEFDGGFERIVAWTGNDFGSQPIFKRISAASPLRGPLQSSLESPVAHYAWNDLAVATAG 243
            L F+ GFE+IVAW  N FGS P F + SAA PLRGPLQSSLESPV HYAWN+LAV   G
Sbjct: 195 DLGFEDGFEKIVAWNSNVFGSHPSFSQSSAAFPLRGPLQSSLESPVPHYAWNELAVEPTG 254

Query: 244 KRHPISI--------PHFVSGGLPHLDVSGRFQNDGDGDGDGGKVSFGSSSFSGR 271
           KRHPI I        P F+SGGLPHLDV GRFQ+      DGGKV   SS +S R
Sbjct: 255 KRHPIPIHDNSSPSSPRFISGGLPHLDVHGRFQS------DGGKVPSHSSLYSRR 303

[Close]
BLAST of Sed0009664 vs. ExPASy TrEMBL
Match: A0A5D3CTP8 (Transcription factor TCP4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00840 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.9e-82
Identity = 185/309 (59.87%), Postives = 208/309 (67.31%), Query Frame = 0 

Query: 5   EHARPRPIIGMKSVAGAEILRVPGGGAFVVRSTGRKDRHSKVSTAKGLRDRRVRLSAHTA 64
           +H+ P   +G+ ++AG +IL VPGGG  VVRST RKDRHSKV T++GLRDRRVRLSAHTA
Sbjct: 14  QHSTPTTTMGINTIAG-QILHVPGGG-LVVRSTARKDRHSKVYTSRGLRDRRVRLSAHTA 73

Query: 65  IQFYDVQDRLGYDRPSKAVDWLIRKAKSAIDKLSELPNPVTQTAP---------NGI--- 124
           IQFYDVQDRLGYDRPSKAVDWLI+KAKSAIDKLS    P   TAP         NGI   
Sbjct: 74  IQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLSANLPPCNTTAPSSVPVETETNGIDVV 133

Query: 125 ----ESGYINDFLFQSQLGENL----TPPALDSAGDFQSYRDLGLSLQTQN--------- 184
               E    +DFLFQSQ  ENL     PP ++S   F+S R+LGLSLQTQN         
Sbjct: 134 VDRSECCKNHDFLFQSQFSENLIPPPPPPPVESGVGFRSCRNLGLSLQTQNSPHNVHHQT 193

Query: 185 --YAAGSGNSGLEFDGGFERIVAWTGNDFGSQPIFKRISAASPLRGPLQSSLESPVAHYA 244
             Y A SGNSG  FD GFE+IVAW  N FGS PI  + S A P RGPLQSSLES V HY 
Sbjct: 194 VFYTANSGNSGPGFDDGFEKIVAWNTNVFGSIPIVNQSSTAFPQRGPLQSSLESTVPHYT 253

Query: 245 WNDLAVATAGKRHP--------ISIPHFVSGGLPHLDVSGRFQNDGDGD----GDGGKVS 271
           WNDL++ +AGKRHP         SIP F+S  LPHLDV GRFQNDGDGD    G+GGK S
Sbjct: 254 WNDLSIVSAGKRHPNPIQENPSPSIPRFISNELPHLDVHGRFQNDGDGDDDGNGNGGKAS 313

[Close]
BLAST of Sed0009664 vs. ExPASy TrEMBL
Match: A0A1S3C3A0 (transcription factor TCP4-like OS=Cucumis melo OX=3656 GN=LOC103496364 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 2.1e-80
Identity = 183/301 (60.80%), Postives = 204/301 (67.77%), Query Frame = 0 

Query: 13  IGMKSVAGAEILRVPGGGAFVVRSTGRKDRHSKVSTAKGLRDRRVRLSAHTAIQFYDVQD 72
           +G+ ++AG +IL VPGGG  VVRST RKDRHSKV T++GLRDRRVRLSAHTAIQFYDVQD
Sbjct: 1   MGINTIAG-QILHVPGGG-LVVRSTARKDRHSKVYTSRGLRDRRVRLSAHTAIQFYDVQD 60

Query: 73  RLGYDRPSKAVDWLIRKAKSAIDKLSELPNPVTQTAP---------NGI-------ESGY 132
           RLGYDRPSKAVDWLI+KAKSAIDKLS    P   TAP         NGI       E   
Sbjct: 61  RLGYDRPSKAVDWLIKKAKSAIDKLSANLPPCNTTAPSSVPVETETNGIDVVVDRSECCK 120

Query: 133 INDFLFQSQLGENL----TPPALDSAGDFQSYRDLGLSLQTQN-----------YAAGSG 192
            +DFLFQSQ  ENL     PP ++S   F+S R+LGLSLQTQN           Y A SG
Sbjct: 121 NHDFLFQSQFSENLIPPPPPPPVESGVGFRSCRNLGLSLQTQNSPHNVHHQTVFYTANSG 180

Query: 193 NSGLEFDGGFERIVAWTGNDFGSQPIFKRISAASPLRGPLQSSLESPVAHYAWNDLAVAT 252
           NSG  FD GFE+IVAW  N FGS PI  + S A P RGPLQSSLES V HY WNDL++ +
Sbjct: 181 NSGPGFDDGFEKIVAWNTNVFGSIPIVNQSSTAFPQRGPLQSSLESTVPHYTWNDLSIVS 240

Query: 253 AGKRHP--------ISIPHFVSGGLPHLDVSGRFQNDGDGD----GDGGKVSFGSSSFSG 271
           AGKRHP         SIP F+S  LPHLDV GRFQNDGDGD    G+GGK S  SSS+S 
Sbjct: 241 AGKRHPNPIQENPSPSIPRFISNELPHLDVHGRFQNDGDGDDDGNGNGGKASSRSSSYSR 299

[Close]
BLAST of Sed0009664 vs. ExPASy TrEMBL
Match: A0A0A0KF06 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G156050 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.9e-78
Identity = 178/307 (57.98%), Postives = 203/307 (66.12%), Query Frame = 0 

Query: 5   EHARPRPIIGMKSVAGAEILRVPGGGAFVVRSTGRKDRHSKVSTAKGLRDRRVRLSAHTA 64
           +H+ P   +G+ ++ G  I  +PGGG  VVRST RKDRHSKV T++GLRDRRVRLSAHTA
Sbjct: 14  QHSTPTTTMGINTIPGQNI-HIPGGG-LVVRSTARKDRHSKVYTSRGLRDRRVRLSAHTA 73

Query: 65  IQFYDVQDRLGYDRPSKAVDWLIRKAKSAIDKLS-ELP--------NPVTQTAPNGI--- 124
           IQFYDVQDRLG+DRPSKAVDWLI+KAKSAIDKLS +LP        +   +T  NGI   
Sbjct: 74  IQFYDVQDRLGFDRPSKAVDWLIKKAKSAIDKLSADLPPCNTNACFSVPVETQTNGIDVV 133

Query: 125 ----ESGYINDFLFQSQLGENL----TPPALDSAGDFQSYRDLGLSLQTQN--------- 184
               E    +DFLFQSQ  ENL     PP ++S   FQS R+LGLSLQTQN         
Sbjct: 134 VDRSECCKNHDFLFQSQFSENLIPPPPPPPIESGLGFQSCRNLGLSLQTQNSPQNVHHHH 193

Query: 185 ----YAAGSGNSGLEFDGGFERIVAWTGNDFGSQPIFKRISAASPLRGPLQSSLESPVAH 244
               Y A SGNSG  FD GFE+IVAW  N FGS PI  + S A P RGPLQS LES V H
Sbjct: 194 QTVFYTASSGNSGPGFDDGFEKIVAWNTNVFGSIPILNQSSTAFPQRGPLQSRLESTVPH 253

Query: 245 YAWNDLAVATAGKRHP--------ISIPHFVSGGLPHLDVSGRFQNDGDGDGDGGKVSFG 271
           Y WNDL+V  AGKRHP         SIP F+S  LPHLDV G+FQNDGDG  +GGK S  
Sbjct: 254 YTWNDLSVVAAGKRHPNPIQENSSPSIPRFISNELPHLDVHGQFQNDGDGKDNGGKSSSH 313

[Close]
BLAST of Sed0009664 vs. TAIR 10
Match: AT3G15030.1 (TCP family transcription factor 4 )

HSP 1 Score: 130.2 bits (326), Expect = 2.5e-30
Identity = 65/80 (81.25%), Postives = 73/80 (91.25%), Query Frame = 0 

Query: 22  EILRVPGGGAFVVRSTGRKDRHSKVSTAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSK 81
           EI+ V GG   +VRSTGRKDRHSKV TAKG RDRRVRLSAHTAIQFYDVQDRLG+DRPSK
Sbjct: 30  EIVEVQGG--HIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSK 89

Query: 82  AVDWLIRKAKSAIDKLSELP 102
           AVDWLI+KAK++ID+L+ELP
Sbjct: 90  AVDWLIKKAKTSIDELAELP 107

[Close]
BLAST of Sed0009664 vs. TAIR 10
Match: AT3G15030.2 (TCP family transcription factor 4 )

HSP 1 Score: 130.2 bits (326), Expect = 2.5e-30
Identity = 65/80 (81.25%), Postives = 73/80 (91.25%), Query Frame = 0 

Query: 22  EILRVPGGGAFVVRSTGRKDRHSKVSTAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSK 81
           EI+ V GG   +VRSTGRKDRHSKV TAKG RDRRVRLSAHTAIQFYDVQDRLG+DRPSK
Sbjct: 30  EIVEVQGG--HIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSK 89

Query: 82  AVDWLIRKAKSAIDKLSELP 102
           AVDWLI+KAK++ID+L+ELP
Sbjct: 90  AVDWLIKKAKTSIDELAELP 107

[Close]
BLAST of Sed0009664 vs. TAIR 10
Match: AT3G15030.3 (TCP family transcription factor 4 )

HSP 1 Score: 130.2 bits (326), Expect = 2.5e-30
Identity = 65/80 (81.25%), Postives = 73/80 (91.25%), Query Frame = 0 

Query: 22  EILRVPGGGAFVVRSTGRKDRHSKVSTAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSK 81
           EI+ V GG   +VRSTGRKDRHSKV TAKG RDRRVRLSAHTAIQFYDVQDRLG+DRPSK
Sbjct: 30  EIVEVQGG--HIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSK 89

Query: 82  AVDWLIRKAKSAIDKLSELP 102
           AVDWLI+KAK++ID+L+ELP
Sbjct: 90  AVDWLIKKAKTSIDELAELP 107

[Close]
BLAST of Sed0009664 vs. TAIR 10
Match: AT2G31070.1 (TCP domain protein 10 )

HSP 1 Score: 128.3 bits (321), Expect = 9.6e-30
Identity = 67/88 (76.14%), Postives = 74/88 (84.09%), Query Frame = 0 

Query: 20  GAEILRVPGGGAFVVRSTGRKDRHSKVSTAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRP 79
           G EI+ V GG   ++R+TGRKDRHSKV T+KG RDRRVRLSAHTAIQFYDVQDRLGYDRP
Sbjct: 12  GGEIVEVQGG--HIIRATGRKDRHSKVFTSKGPRDRRVRLSAHTAIQFYDVQDRLGYDRP 71

Query: 80  SKAVDWLIRKAKSAIDKLSELPNPVTQT 108
           SKAVDWLI+KAK+AIDKL EL    T T
Sbjct: 72  SKAVDWLIKKAKTAIDKL-ELGETTTTT 96

[Close]
BLAST of Sed0009664 vs. TAIR 10
Match: AT1G53230.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 )

HSP 1 Score: 125.6 bits (314), Expect = 6.2e-29
Identity = 65/80 (81.25%), Postives = 70/80 (87.50%), Query Frame = 0 

Query: 22  EILRVPGGGAFVVRSTGRKDRHSKVSTAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSK 81
           EI+ V GG   +VRSTGRKDRHSKV TAKG RDRRVRLSA TAIQFYDVQDRLG+DRPSK
Sbjct: 34  EIVEVQGG--HIVRSTGRKDRHSKVCTAKGPRDRRVRLSAPTAIQFYDVQDRLGFDRPSK 93

Query: 82  AVDWLIRKAKSAIDKLSELP 102
           AVDWLI KAKSAID L++LP
Sbjct: 94  AVDWLITKAKSAIDDLAQLP 111

The following BLAST results are available for this feature:
BLAST of Sed0009664 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023533212.11.4e-9466.10transcription factor TCP3-like [Cucurbita pepo subsp. pepo][more]
XP_022970749.13.0e-9465.76transcription factor TCP3-like [Cucurbita maxima][more]
XP_022947877.18.9e-9465.76transcription factor TCP3-like [Cucurbita moschata][more]
KAG7034889.18.9e-9465.76Transcription factor TCP4, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6604760.19.2e-9167.53Transcription factor TCP4, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of Sed0009664 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
A2WM141.6e-2941.78Transcription factor PCF5 OS=Oryza sativa subsp. indica OX=39946 GN=PCF5 PE=4 SV... [more]
Q8LT071.6e-2941.78Transcription factor PCF5 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF5 PE=2 ... [more]
Q8LPR53.6e-2981.25Transcription factor TCP4 OS=Arabidopsis thaliana OX=3702 GN=TCP4 PE=1 SV=1[more]
O822771.4e-2876.14Transcription factor TCP10 OS=Arabidopsis thaliana OX=3702 GN=TCP10 PE=1 SV=1[more]
A2WV683.0e-2849.34Transcription factor PCF7 OS=Oryza sativa subsp. indica OX=39946 GN=PCF7 PE=4 SV... [more]
BLAST of Sed0009664 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1I6J31.5e-9465.76transcription factor TCP3-like OS=Cucurbita maxima OX=3661 GN=LOC111469647 PE=4 ... [more]
A0A6J1G7M24.3e-9465.76transcription factor TCP3-like OS=Cucurbita moschata OX=3662 GN=LOC111451636 PE=... [more]
A0A5D3CTP82.9e-8259.87Transcription factor TCP4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A1S3C3A02.1e-8060.80transcription factor TCP4-like OS=Cucumis melo OX=3656 GN=LOC103496364 PE=4 SV=1[more]
A0A0A0KF061.9e-7857.98TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G156050 PE=4 SV... [more]
BLAST of Sed0009664 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G15030.12.5e-3081.25TCP family transcription factor 4 [more]
AT3G15030.22.5e-3081.25TCP family transcription factor 4 [more]
AT3G15030.32.5e-3081.25TCP family transcription factor 4 [more]
AT2G31070.19.6e-3076.14TCP domain protein 10 [more]
AT1G53230.16.2e-2981.25TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017887Transcription factor TCP subgroupPFAMPF03634TCPcoord: 38..108
e-value: 1.1E-30
score: 107.3
IPR017887Transcription factor TCP subgroupPROSITEPS51369TCPcoord: 39..97
score: 32.20446
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 244..270
NoneNo IPR availablePANTHERPTHR31072:SF136TRANSCRIPTION FACTOR TCP10coord: 20..108
IPR005333Transcription factor, TCPPANTHERPTHR31072TRANSCRIPTION FACTOR TCP4-RELATEDcoord: 20..108

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0009664.1Sed0009664.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0050789 regulation of biological process
molecular_function GO:0003700 DNA-binding transcription factor activity