Sed0009024 (gene) Chayote v1

Overview


Name	Sed0009024
Type	gene
Organism	Sechium edule (Chayote v1)
Description	HTH myb-type domain-containing protein
Location	LG03: 15552114 .. 15554151 (+)
RNA-Seq Expression	Sed0009024
Synteny	Sed0009024

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAAATTAAAAATAAAAAATACAACAAAATGGAAAAACAGACAGGCAAAAGAAAGCATCAGCAACAGTACCTCCACACCCCCGGCCCCTACCCAAAAAAAATGAAAGAAAAAAAACTAGAAGAAAACAAGATCCACCTCGAATTTCTCTTCATCTTCAACCCTTTTTTGCAACCCCTTCATAATCCATAATCCCTTCTTTCTGTTCTTCATTATAATCGCTGCCCATCTCCCTGTTTCTCCGTGTTGTTTCGAATTGGGGACTGATTTTTGTTTCTGGGGTTTGTTTATTTTGCTTGATTATTGTTTGTAATGGTGTTAATTGAATTGGGTTCTCTTTAATTTCTGGATTTTTTGCTGTTTTTAGTGTTGGGGTTTTTTGAACTGTTGACCAGGACGAAGAACAGTGAGTTGGGTTGGAGCTAGATTTGGGGAATAATGAGGGAAGAGCACTCGAATTGGTTTTCGAGATGGGAAGATGAGCTTCCATCTCCGGATGAATTGATTTCTCTTTCACAAACCCTAATAACCCCTGATCTTGCTTTGGCTTTTGATATTCAAAATCCCACAAACAGCACTTCGCCCTTGCCTTGCCCGTCTCCGCCGCTTTCCAATCCCCTCCCCGGTTCCGGCAACGGTACTGTCCCTCCCAACTCGGCCGATTTCGCCGATTCGGCCGATTTCGGCAGCGACGAGCCGGCCCGGACCCTTAAGCGCCCGCGCCTCGTCTGGACTCCACAGCTCCATAAGCGGTTTGTGGATGCTGTTGCTCATTTGGGGATAAAGAATGCTGTCCCCAAAACCATTATGCAGCTTATGAGTGTGGATGGCTTGACTAGAGAGAATGTAGCTAGCCATTTGCAGAAGTACCGCCTCTATCTCAAGCGGATGCAGGGCTTGTCGAGTGGCGGCGGCGGCGGTGCGGGGTTGCTTGCTTCCTCGGATCCGGCTACTGACCATTTGTTTGCTAGCTCCCCTGTTCCACCCCATTTGCTTCACTCTGCGCGTGCCGGTTCTGACCACTTCTTGCCCTTTGTTCCCATGGCGACTCTCCAACAGCACCACCATCACCAGCAGCAGATGGCTTCTGTTGTCGCCCACCCGCAGCTTCAGCCGGCTTATCATCAGCAGGTTGGGCATTTCGGGTCACCGCCGAACAGGCAGTTCGAGCATCCGTTTTTAGCCAGGCAGTCACAACCTATCCATAGAATGGGGACACCAGTCCATAGTTCAGGTCCTAATTACATCGAGGATTTGGAATCAGCCAATGCCAGTGGAGGAAGAAAAGTTCTGACCTTATTTCCAACTGGAGATGATTGAGTTTGTTTGTTCTTCCTCTCCACTGATCTTTTTTCTGTTATGTTCTAATTCTTGTGGAAATTGGTACAAATGTTGTGGGTCTGATCTGAATCTCTTGATGATGTTATCTTAGTTTTTGTTTCTCTATAGTTGTTTTTAATGTCCCTGCTTATCTGTTTAGTTGGCTTGGTTGTTATTATAATAGGAAACTCATGACCAAATCCAAATGTTCACTAGCTTACTTCTTTTACAAATAGGTAGAGAAGCCCATTCCACTAATTAATGGTGGTTTATAGAGGGAGAAAGGGAGTTTTATCTTTTATCTGTCAAGTTCCCCACATGAGTTGCTGTTATCCTATCCAACGATCAGGTTCCTTGTCGTGCGGCTCAAACAGAAAATAATGCCATTAGGTTTTTCTGCTTTCAGTTGTTAGATGTCAAGATGAGGTTCATAAAAACCCAAGAACCTGCTGCTTCTTATGTAATCAGGGTGGAAGAGGTTCATTTGTCAATATTGTCAAGGCGGATGATGAAGAAGCATCTAGCTGAGTTTTATTTTGTCGCTTTAGGAGCTCGAGGGACGACCGATGTTGATGCGGGCACGTGATATCTATCCTTAGGTCAGTTTTCTGCAGATATAGTAACTTTCTCACTTGTACATTATTTATTATAAAGGTTCAAAAAAATCATAATATGTGAGCGTCTATTTTAACAATTCTTAGTTCATTAGCATGTTGGTG

mRNA sequence

ATAAAATTAAAAATAAAAAATACAACAAAATGGAAAAACAGACAGGCAAAAGAAAGCATCAGCAACAGTACCTCCACACCCCCGGCCCCTACCCAAAAAAAATGAAAGAAAAAAAACTAGAAGAAAACAAGATCCACCTCGAATTTCTCTTCATCTTCAACCCTTTTTTGCAACCCCTTCATAATCCATAATCCCTTCTTTCTGTTCTTCATTATAATCGCTGCCCATCTCCCTGTTTCTCCGTGTTGTTTCGAATTGGGGACTGATTTTTGTTTCTGGGGTTTGTTTATTTTGCTTGATTATTGTTTGTAATGGTGTTAATTGAATTGGGTTCTCTTTAATTTCTGGATTTTTTGCTGTTTTTAGTGTTGGGGTTTTTTGAACTGTTGACCAGGACGAAGAACAGTGAGTTGGGTTGGAGCTAGATTTGGGGAATAATGAGGGAAGAGCACTCGAATTGGTTTTCGAGATGGGAAGATGAGCTTCCATCTCCGGATGAATTGATTTCTCTTTCACAAACCCTAATAACCCCTGATCTTGCTTTGGCTTTTGATATTCAAAATCCCACAAACAGCACTTCGCCCTTGCCTTGCCCGTCTCCGCCGCTTTCCAATCCCCTCCCCGGTTCCGGCAACGGTACTGTCCCTCCCAACTCGGCCGATTTCGCCGATTCGGCCGATTTCGGCAGCGACGAGCCGGCCCGGACCCTTAAGCGCCCGCGCCTCGTCTGGACTCCACAGCTCCATAAGCGGTTTGTGGATGCTGTTGCTCATTTGGGGATAAAGAATGCTGTCCCCAAAACCATTATGCAGCTTATGAGTGTGGATGGCTTGACTAGAGAGAATGTAGCTAGCCATTTGCAGAAGTACCGCCTCTATCTCAAGCGGATGCAGGGCTTGTCGAGTGGCGGCGGCGGCGGTGCGGGGTTGCTTGCTTCCTCGGATCCGGCTACTGACCATTTGTTTGCTAGCTCCCCTGTTCCACCCCATTTGCTTCACTCTGCGCGTGCCGGTTCTGACCACTTCTTGCCCTTTGTTCCCATGGCGACTCTCCAACAGCACCACCATCACCAGCAGCAGATGGCTTCTGTTGTCGCCCACCCGCAGCTTCAGCCGGCTTATCATCAGCAGGTTGGGCATTTCGGGTCACCGCCGAACAGGCAGTTCGAGCATCCGTTTTTAGCCAGGCAGTCACAACCTATCCATAGAATGGGGACACCAGTCCATAGTTCAGGTCCTAATTACATCGAGGATTTGGAATCAGCCAATGCCAGTGGAGGAAGAAAAGTTCTGACCTTATTTCCAACTGGAGATGATTGAGTTTGTTTGTTCTTCCTCTCCACTGATCTTTTTTCTGTTATGTTCTAATTCTTGTGGAAATTGGTACAAATGTTGTGGGTCTGATCTGAATCTCTTGATGATGTTATCTTAGTTTTTGTTTCTCTATAGTTGTTTTTAATGTCCCTGCTTATCTGTTTAGTTGGCTTGGTTGTTATTATAATAGGAAACTCATGACCAAATCCAAATGTTCACTAGCTTACTTCTTTTACAAATAGGTAGAGAAGCCCATTCCACTAATTAATGGTGGTTTATAGAGGGAGAAAGGGAGTTTTATCTTTTATCTGTCAAGTTCCCCACATGAGTTGCTGTTATCCTATCCAACGATCAGGTTCCTTGTCGTGCGGCTCAAACAGAAAATAATGCCATTAGGTTTTTCTGCTTTCAGTTGTTAGATGTCAAGATGAGGTTCATAAAAACCCAAGAACCTGCTGCTTCTTATGTAATCAGGGTGGAAGAGGTTCATTTGTCAATATTGTCAAGGCGGATGATGAAGAAGCATCTAGCTGAGTTTTATTTTGTCGCTTTAGGAGCTCGAGGGACGACCGATGTTGATGCGGGCACGTGATATCTATCCTTAGGTCAGTTTTCTGCAGATATAGTAACTTTCTCACTTGTACATTATTTATTATAAAGGTTCAAAAAAATCATAATATGTGAGCGTCTATTTTAACAATTCTTAGTTCATTAGCATGTTGGTG

Coding sequence (CDS)

ATGAGGGAAGAGCACTCGAATTGGTTTTCGAGATGGGAAGATGAGCTTCCATCTCCGGATGAATTGATTTCTCTTTCACAAACCCTAATAACCCCTGATCTTGCTTTGGCTTTTGATATTCAAAATCCCACAAACAGCACTTCGCCCTTGCCTTGCCCGTCTCCGCCGCTTTCCAATCCCCTCCCCGGTTCCGGCAACGGTACTGTCCCTCCCAACTCGGCCGATTTCGCCGATTCGGCCGATTTCGGCAGCGACGAGCCGGCCCGGACCCTTAAGCGCCCGCGCCTCGTCTGGACTCCACAGCTCCATAAGCGGTTTGTGGATGCTGTTGCTCATTTGGGGATAAAGAATGCTGTCCCCAAAACCATTATGCAGCTTATGAGTGTGGATGGCTTGACTAGAGAGAATGTAGCTAGCCATTTGCAGAAGTACCGCCTCTATCTCAAGCGGATGCAGGGCTTGTCGAGTGGCGGCGGCGGCGGTGCGGGGTTGCTTGCTTCCTCGGATCCGGCTACTGACCATTTGTTTGCTAGCTCCCCTGTTCCACCCCATTTGCTTCACTCTGCGCGTGCCGGTTCTGACCACTTCTTGCCCTTTGTTCCCATGGCGACTCTCCAACAGCACCACCATCACCAGCAGCAGATGGCTTCTGTTGTCGCCCACCCGCAGCTTCAGCCGGCTTATCATCAGCAGGTTGGGCATTTCGGGTCACCGCCGAACAGGCAGTTCGAGCATCCGTTTTTAGCCAGGCAGTCACAACCTATCCATAGAATGGGGACACCAGTCCATAGTTCAGGTCCTAATTACATCGAGGATTTGGAATCAGCCAATGCCAGTGGAGGAAGAAAAGTTCTGACCTTATTTCCAACTGGAGATGATTGA

Protein sequence

MREEHSNWFSRWEDELPSPDELISLSQTLITPDLALAFDIQNPTNSTSPLPCPSPPLSNPLPGSGNGTVPPNSADFADSADFGSDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGGAGLLASSDPATDHLFASSPVPPHLLHSARAGSDHFLPFVPMATLQQHHHHQQQMASVVAHPQLQPAYHQQVGHFGSPPNRQFEHPFLARQSQPIHRMGTPVHSSGPNYIEDLESANASGGRKVLTLFPTGDD

Homology

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BLAST of Sed0009024 vs. NCBI nr
Match: XP_004144322.1 (transcription factor MYBC1 [Cucumis sativus] >KGN54684.1 hypothetical protein Csa_012282 [Cucumis sativus])

HSP 1 Score: 535.0 bits (1377), Expect = 4.0e-148
Identity = 268/301 (89.04%), Postives = 277/301 (92.03%), Query Frame = 0


Query: 1   MREEHSNWFSRWEDELPSPDELISLSQTLITPDLALAFDIQNPTNSTSPLPCPSPPLSNP 60
           MREEHSNWFSRWEDELPSPDEL+ LSQTLITPDLALAFDIQNP+NS+ PLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGTVPPNSADFADSADFG----SDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNG VPPNSADF DSAD G    SDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS-SGGGGGAGLLASSDPATDHL 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS  GGGGGA L+ SSDPATDHL
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGAALVGSSDPATDHL 180

Query: 181 FASSPVPPHLLHSARAGSDHFLPFVPMATLQQHHHHQQQM---ASVVAHPQLQPAYHQQV 240
           FASSPVPPHLLHSAR  SDHFLP+VPMATLQQHHHHQQQM   A+V  H QLQP YH+QV
Sbjct: 181 FASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQV 240

Query: 241 GHFGSPPNRQFEHPFLARQSQPIHRMGTPVHSSGPNYIEDLESANASGGRKVLTLFPTGD 294
           GHFGSPPN QFEHPFLARQSQPIHRMGTPVH+S PNYIEDLESANA+GGRKVLTLFPTGD
Sbjct: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300

[Close]

BLAST of Sed0009024 vs. NCBI nr
Match: XP_008455739.1 (PREDICTED: transcription factor PCL1-like [Cucumis melo] >KAA0025859.1 transcription factor PCL1-like [Cucumis melo var. makuwa] >TYK22606.1 transcription factor PCL1-like [Cucumis melo var. makuwa])

HSP 1 Score: 531.6 bits (1368), Expect = 4.4e-147
Identity = 267/301 (88.70%), Postives = 276/301 (91.69%), Query Frame = 0


Query: 1   MREEHSNWFSRWEDELPSPDELISLSQTLITPDLALAFDIQNPTNSTSPLPCPSPPLSNP 60
           MREEHSNWFSRWE+ELPSPDEL+ LSQTLITPDLALAFDIQNP+NS+ PLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGTVPPNSADFADSADFG----SDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNG VPPNSADF DSAD G    SDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGG-GGGAGLLASSDPATDHL 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS GG GGGA L+ SSDPATDHL
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGAGGGAALVGSSDPATDHL 180

Query: 181 FASSPVPPHLLHSARAGSDHFLPFVPMATLQQHHHHQQQM---ASVVAHPQLQPAYHQQV 240
           FASSPVPPHLLHSAR  SDHFLPFVPMATLQQHHHHQQQM   A+V  H QLQP YH+QV
Sbjct: 181 FASSPVPPHLLHSARTSSDHFLPFVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQV 240

Query: 241 GHFGSPPNRQFEHPFLARQSQPIHRMGTPVHSSGPNYIEDLESANASGGRKVLTLFPTGD 294
           GHFGSPPN QFEHPFLARQSQPIHRMGT VH+S PNYIEDLESANA+GGRKVLTLFPTGD
Sbjct: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGTSVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300

[Close]

BLAST of Sed0009024 vs. NCBI nr
Match: XP_038882973.1 (transcription factor MYBC1-like [Benincasa hispida])

HSP 1 Score: 530.4 bits (1365), Expect = 9.8e-147
Identity = 266/301 (88.37%), Postives = 275/301 (91.36%), Query Frame = 0


Query: 1   MREEHSNWFSRWEDELPSPDELISLSQTLITPDLALAFDIQNPTNSTSPLPCPSPPLSNP 60
           MREEHSNWFSRWE+ELPSPDEL+ LSQTLITPDLALAFDIQNP+NS+ PLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGTVPPNSADFADSADFGS----DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNG  PPNSADF DSAD GS    DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIAPPNSADFGDSADLGSGAAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGGAG-LLASSDPATDHL 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS GGGGG G L+ SSDPATDHL
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGGALVGSSDPATDHL 180

Query: 181 FASSPVPPHLLHSARAGSDHFLPFVPMATLQQHHHHQQQM---ASVVAHPQLQPAYHQQV 240
           FASSPVPPHLLHSAR  SDHFLPFVPMATLQQHHHHQQQM   A+V +H QLQP YH+QV
Sbjct: 181 FASSPVPPHLLHSARTSSDHFLPFVPMATLQQHHHHQQQMAAAAAVASHSQLQPPYHRQV 240

Query: 241 GHFGSPPNRQFEHPFLARQSQPIHRMGTPVHSSGPNYIEDLESANASGGRKVLTLFPTGD 294
           GHFGSPPN QFEHPFLARQSQPIHRMG  VH+S PNYIEDLESANASGGRKVLTLFPTGD
Sbjct: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGASVHNSVPNYIEDLESANASGGRKVLTLFPTGD 300

[Close]

BLAST of Sed0009024 vs. NCBI nr
Match: XP_022967861.1 (transcription factor MYBC1-like [Cucurbita maxima])

HSP 1 Score: 525.4 bits (1352), Expect = 3.1e-145
Identity = 265/305 (86.89%), Postives = 277/305 (90.82%), Query Frame = 0


Query: 1   MREEHSNWFSRWEDELPSPDELISLSQTLITPDLALAFDIQNPTNSTSPLPCPSPPLSNP 60
           MREEHSNWFSRWE+ELPSPDEL+ LSQTLITPDLALAFDIQN +N++ PLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNSSNTSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGTVPPNSADFADSADFG----SDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNG  PPNSADF DSAD G    SDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIAPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSS--GGGGGAGLLASSDPATDH 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSS  GGGGG GL+ASSDP TDH
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGGGGGGLVASSDP-TDH 180

Query: 181 LFASSPVPPHLLHSARAGSDHFLPFVPMATLQQHHHHQQQM------ASVVAHPQLQPAY 240
           LFASSPVPPHLLHSAR+ SDHFLPFVPMATLQQHHHHQQ M      A+V  HPQLQP+Y
Sbjct: 181 LFASSPVPPHLLHSARSTSDHFLPFVPMATLQQHHHHQQHMAAAAAAAAVAGHPQLQPSY 240

Query: 241 HQQVGHFGSPPNRQFEHPFLARQSQPIHRMGTPVHSSGPNYIEDLESANASGGRKVLTLF 294
           H+QVGHFGSPPN QFEHPFLARQSQP+HRMG PVHSS PNYIEDLESANA+GGRKVLTLF
Sbjct: 241 HRQVGHFGSPPNGQFEHPFLARQSQPVHRMGAPVHSSIPNYIEDLESANANGGRKVLTLF 300

[Close]

BLAST of Sed0009024 vs. NCBI nr
Match: XP_023543478.1 (transcription factor MYBC1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 524.6 bits (1350), Expect = 5.4e-145
Identity = 264/304 (86.84%), Postives = 277/304 (91.12%), Query Frame = 0


Query: 1   MREEHSNWFSRWEDELPSPDELISLSQTLITPDLALAFDIQNPTNSTSPLPCPSPPLSNP 60
           MREEHSNWFSRWE+ELPSPDEL+ LSQTLITPDLALAFDIQN +N++ PLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNSSNTSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGTVPPNSADFADSADFG----SDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNG  PPNSADF DSAD G    SDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIAPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSS--GGGGGAGLLASSDPATDH 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSS  GGGGG GL+ASSDP TDH
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGGGGGGLVASSDP-TDH 180

Query: 181 LFASSPVPPHLLHSARAGSDHFLPFVPMATLQQHHHHQQQM-----ASVVAHPQLQPAYH 240
           LFASSPVPPHLLHSAR+ SDHFLPFVPMATLQQHHHHQQ M     A+V  HPQLQP+YH
Sbjct: 181 LFASSPVPPHLLHSARSTSDHFLPFVPMATLQQHHHHQQHMAAAAAAAVAGHPQLQPSYH 240

Query: 241 QQVGHFGSPPNRQFEHPFLARQSQPIHRMGTPVHSSGPNYIEDLESANASGGRKVLTLFP 294
           +QVGHFGSPPN QFEHPFLARQSQP+HRMG PVH+S PNYIEDLESANA+GGRKVLTLFP
Sbjct: 241 RQVGHFGSPPNGQFEHPFLARQSQPVHRMGAPVHNSIPNYIEDLESANANGGRKVLTLFP 300

[Close]

BLAST of Sed0009024 vs. ExPASy Swiss-Prot
Match: O22210 (Transcription factor MYBC1 OS=Arabidopsis thaliana OX=3702 GN=MYBC1 PE=1 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 6.3e-56
Identity = 133/237 (56.12%), Postives = 151/237 (63.71%), Query Frame = 0


Query: 1   MREEHSNWFSRWEDELPSPDELISLSQTLITPDLALAFDIQNP----------------- 60
           MRE++ NWF RWE+ELPSP+ELI +SQTLITP LALAF I +P                 
Sbjct: 1   MREDNPNWFLRWEEELPSPEELIPISQTLITPHLALAFQIGSPNHHLGSKRTTAIYHQKL 60

Query: 61  ---TNSTSPLPCPSPPLSNPLPGSGNGTVPPNSADFADSADFGS----DEPARTLKRPRL 120
              T  T+P P P P + N   G G            DS D GS     EPARTLKRPRL
Sbjct: 61  QSSTTPTTPTPTPPPMMMNSDFGGG------------DSTDLGSGSIGGEPARTLKRPRL 120

Query: 121 VWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSS 180
           VWTPQLHKRFVDAV HLGIKNAVPKTIMQLMSV+GLTRENVASHLQKYRLYL+RMQG  +
Sbjct: 121 VWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYRLYLRRMQG-GN 180

Query: 181 GGGGGAGLLASSDPATDHLFASSPVPPHLLHSARAGSDHFLPFVPMATLQQHHHHQQ 214
           G G   G +  SD ATD LFASSPVP H L       D+ +P +  + + +H   QQ
Sbjct: 181 GNGITGGHVIVSDSATDRLFASSPVPAHFL-----SPDYLMPPLEHSYMGKHVITQQ 219

[Close]

BLAST of Sed0009024 vs. ExPASy Swiss-Prot
Match: Q9SNB4 (Transcription factor LUX OS=Arabidopsis thaliana OX=3702 GN=LUX PE=1 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.0e-38
Identity = 116/280 (41.43%), Postives = 144/280 (51.43%), Query Frame = 0


Query: 10  SRWEDELPSPDELISLSQTLITPDLALAFDI----------------------------- 69
           S WE  LPS ++L SLS +LI P+LA+AF I                             
Sbjct: 20  SEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASETTLSSLRGGSSGP 79

Query: 70  -----------QNPTNSTSPLPCPSPPLSNPLPGSGNGTVPPNSADFADSADFGSDE-PA 129
                      ++   S+SP        ++   G   G V P+SA  A+  D G+++   
Sbjct: 80  NTSSSNNNVEEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDPDSAMAAEEGDSGTEDLSG 139

Query: 130 RTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYL 189
           +TLKRPRLVWTPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQKYRLYL
Sbjct: 140 KTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYL 199

Query: 190 KRMQGLSSGGGGGAGLLASSDPATDHLFASSPVPPHLLHSARAG---SDHFLPFVPMATL 246
           KRMQGL++ G            A+D LF+S+PVPP        G   S +    +P A  
Sbjct: 200 KRMQGLTNEG----------PSASDKLFSSTPVPPQSFQDIGGGGGSSGNVGVPIPGAYG 259

[Close]

BLAST of Sed0009024 vs. ExPASy Swiss-Prot
Match: Q94DH3 (Transcription factor PCL1 OS=Oryza sativa subsp. japonica OX=39947 GN=PCL1 PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.8e-34
Identity = 105/235 (44.68%), Postives = 125/235 (53.19%), Query Frame = 0


Query: 12  WEDELPSPDELISLSQTLITPDLALAF-----------DIQNPTNST-SPLPCPSPPLSN 71
           WE  LP  DEL  LSQ L+   LA AF           D+   + +T S L   S   S+
Sbjct: 22  WETGLPGADELTPLSQPLVPAGLAAAFRIPPEPGRTLLDVHRASAATVSRLRRASSSSSS 81

Query: 72  PLP-----GSGNGTVPPNSADFADSADFGSDEPARTLKRPRLVWTPQLHKRFVDAVAHLG 131
             P     G+G G     S   AD  +  ++  +   KR RLVWTPQLHKRFV+ VAHLG
Sbjct: 82  SFPAFASKGAGTGADEAESGGGADGGNGNTNNSSS--KRARLVWTPQLHKRFVEVVAHLG 141

Query: 132 IKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGGAGLLASSDPATDH 191
           +KNAVPKTIMQLM+V+GLTRENVASHLQKYRLY+KRMQGLS+ G             +DH
Sbjct: 142 MKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYVKRMQGLSNEG----------PSPSDH 201

Query: 192 LFASSPVPPHLLHSARAGSDHFLPFVPMATLQQHHHHQQQMASVVAHPQLQPAYH 230
           +FAS+PVP   LH            VP       HHH    A+  A       YH
Sbjct: 202 IFASTPVPHASLHDQ----------VPSPYHPHPHHHSYNNAAYAATVSSYHHYH 234

[Close]

BLAST of Sed0009024 vs. ExPASy Swiss-Prot
Match: Q9LTH4 (Transcription factor BOA OS=Arabidopsis thaliana OX=3702 GN=BOA PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 5.2e-34
Identity = 105/263 (39.92%), Postives = 137/263 (52.09%), Query Frame = 0


Query: 12  WEDELPSPDELISLSQTLITPDLALAF----------------------DIQNPTNSTSP 71
           WE  LP+ D+L  LSQ L+   LALAF                       +++ TN++S 
Sbjct: 29  WEIGLPNGDDLTPLSQYLVPSILALAFSMIPERSRTIHDVNRASQITLSSLRSSTNASSV 88

Query: 72  LPCPSPPLSNPLPG--------SGNGTVPPNSADFADSADFG-SDEPARTLKRPRLVWTP 131
           +      + + +PG        S  G         A+  D G  D   +T KRPRLVWTP
Sbjct: 89  MEEVVDRVESSVPGSDPKKQKKSDGGEAAAVEDSTAEEGDSGPEDASGKTSKRPRLVWTP 148

Query: 132 QLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGG 191
           QLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQKYRLYLKR+QGL++    
Sbjct: 149 QLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRIQGLTT---- 208

Query: 192 GAGLLASSDP--ATDHLFASSPVPPHLLHSARAGSDHFLPFVPMATLQQHHHHQQQMASV 242
                   DP  ++D LF+S+PVPP         +      VP+ ++     +  QM   
Sbjct: 209 ------EEDPYSSSDQLFSSTPVPPQSFQDGGGSNGKLGVPVPVPSMVPIPGYGNQMG-- 268

[Close]

BLAST of Sed0009024 vs. ExPASy Swiss-Prot
Match: A2XE31 (Two-component response regulator ORR21 OS=Oryza sativa subsp. indica OX=39946 GN=RR21 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 6.6e-21
Identity = 57/118 (48.31%), Postives = 74/118 (62.71%), Query Frame = 0


Query: 78  DSADFGSDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENV 137
           D  +  S +P+ T K+PR+VW+ +LH++FV+AV HLGI  AVPK I++LM+V GLTRENV
Sbjct: 187 DDGELESGDPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLTRENV 246

Query: 138 ASHLQKYRLYLKRMQGLSSG---------GGGGAGLLASSDPATDHLFASSPVPPHLL 187
           ASHLQK+RLYLKR+    +G           G  G L   D     L AS  +PP  L
Sbjct: 247 ASHLQKFRLYLKRIAQHHAGIANPFCPPASSGKVGSLGGLD--FQALAASGQIPPQAL 302

[Close]

BLAST of Sed0009024 vs. ExPASy TrEMBL
Match: A0A0A0L0V3 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G425730 PE=4 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 1.9e-148
Identity = 268/301 (89.04%), Postives = 277/301 (92.03%), Query Frame = 0


Query: 1   MREEHSNWFSRWEDELPSPDELISLSQTLITPDLALAFDIQNPTNSTSPLPCPSPPLSNP 60
           MREEHSNWFSRWEDELPSPDEL+ LSQTLITPDLALAFDIQNP+NS+ PLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGTVPPNSADFADSADFG----SDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNG VPPNSADF DSAD G    SDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS-SGGGGGAGLLASSDPATDHL 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS  GGGGGA L+ SSDPATDHL
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGAALVGSSDPATDHL 180

Query: 181 FASSPVPPHLLHSARAGSDHFLPFVPMATLQQHHHHQQQM---ASVVAHPQLQPAYHQQV 240
           FASSPVPPHLLHSAR  SDHFLP+VPMATLQQHHHHQQQM   A+V  H QLQP YH+QV
Sbjct: 181 FASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQV 240

Query: 241 GHFGSPPNRQFEHPFLARQSQPIHRMGTPVHSSGPNYIEDLESANASGGRKVLTLFPTGD 294
           GHFGSPPN QFEHPFLARQSQPIHRMGTPVH+S PNYIEDLESANA+GGRKVLTLFPTGD
Sbjct: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300

[Close]

BLAST of Sed0009024 vs. ExPASy TrEMBL
Match: A0A5A7SKT7 (Transcription factor PCL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00270 PE=4 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 2.1e-147
Identity = 267/301 (88.70%), Postives = 276/301 (91.69%), Query Frame = 0


Query: 1   MREEHSNWFSRWEDELPSPDELISLSQTLITPDLALAFDIQNPTNSTSPLPCPSPPLSNP 60
           MREEHSNWFSRWE+ELPSPDEL+ LSQTLITPDLALAFDIQNP+NS+ PLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGTVPPNSADFADSADFG----SDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNG VPPNSADF DSAD G    SDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGG-GGGAGLLASSDPATDHL 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS GG GGGA L+ SSDPATDHL
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGAGGGAALVGSSDPATDHL 180

Query: 181 FASSPVPPHLLHSARAGSDHFLPFVPMATLQQHHHHQQQM---ASVVAHPQLQPAYHQQV 240
           FASSPVPPHLLHSAR  SDHFLPFVPMATLQQHHHHQQQM   A+V  H QLQP YH+QV
Sbjct: 181 FASSPVPPHLLHSARTSSDHFLPFVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQV 240

Query: 241 GHFGSPPNRQFEHPFLARQSQPIHRMGTPVHSSGPNYIEDLESANASGGRKVLTLFPTGD 294
           GHFGSPPN QFEHPFLARQSQPIHRMGT VH+S PNYIEDLESANA+GGRKVLTLFPTGD
Sbjct: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGTSVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300

[Close]

BLAST of Sed0009024 vs. ExPASy TrEMBL
Match: A0A1S3C2U8 (transcription factor PCL1-like OS=Cucumis melo OX=3656 GN=LOC103495840 PE=4 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 2.1e-147
Identity = 267/301 (88.70%), Postives = 276/301 (91.69%), Query Frame = 0


Query: 1   MREEHSNWFSRWEDELPSPDELISLSQTLITPDLALAFDIQNPTNSTSPLPCPSPPLSNP 60
           MREEHSNWFSRWE+ELPSPDEL+ LSQTLITPDLALAFDIQNP+NS+ PLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGTVPPNSADFADSADFG----SDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNG VPPNSADF DSAD G    SDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGG-GGGAGLLASSDPATDHL 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS GG GGGA L+ SSDPATDHL
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGAGGGAALVGSSDPATDHL 180

Query: 181 FASSPVPPHLLHSARAGSDHFLPFVPMATLQQHHHHQQQM---ASVVAHPQLQPAYHQQV 240
           FASSPVPPHLLHSAR  SDHFLPFVPMATLQQHHHHQQQM   A+V  H QLQP YH+QV
Sbjct: 181 FASSPVPPHLLHSARTSSDHFLPFVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQV 240

Query: 241 GHFGSPPNRQFEHPFLARQSQPIHRMGTPVHSSGPNYIEDLESANASGGRKVLTLFPTGD 294
           GHFGSPPN QFEHPFLARQSQPIHRMGT VH+S PNYIEDLESANA+GGRKVLTLFPTGD
Sbjct: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGTSVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300

[Close]

BLAST of Sed0009024 vs. ExPASy TrEMBL
Match: A0A6J1HT87 (transcription factor MYBC1-like OS=Cucurbita maxima OX=3661 GN=LOC111467241 PE=4 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.5e-145
Identity = 265/305 (86.89%), Postives = 277/305 (90.82%), Query Frame = 0


Query: 1   MREEHSNWFSRWEDELPSPDELISLSQTLITPDLALAFDIQNPTNSTSPLPCPSPPLSNP 60
           MREEHSNWFSRWE+ELPSPDEL+ LSQTLITPDLALAFDIQN +N++ PLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNSSNTSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGTVPPNSADFADSADFG----SDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNG  PPNSADF DSAD G    SDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIAPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSS--GGGGGAGLLASSDPATDH 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSS  GGGGG GL+ASSDP TDH
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGGGGGGLVASSDP-TDH 180

Query: 181 LFASSPVPPHLLHSARAGSDHFLPFVPMATLQQHHHHQQQM------ASVVAHPQLQPAY 240
           LFASSPVPPHLLHSAR+ SDHFLPFVPMATLQQHHHHQQ M      A+V  HPQLQP+Y
Sbjct: 181 LFASSPVPPHLLHSARSTSDHFLPFVPMATLQQHHHHQQHMAAAAAAAAVAGHPQLQPSY 240

Query: 241 HQQVGHFGSPPNRQFEHPFLARQSQPIHRMGTPVHSSGPNYIEDLESANASGGRKVLTLF 294
           H+QVGHFGSPPN QFEHPFLARQSQP+HRMG PVHSS PNYIEDLESANA+GGRKVLTLF
Sbjct: 241 HRQVGHFGSPPNGQFEHPFLARQSQPVHRMGAPVHSSIPNYIEDLESANANGGRKVLTLF 300

[Close]

BLAST of Sed0009024 vs. ExPASy TrEMBL
Match: A0A6J1F331 (transcription factor MYBC1-like OS=Cucurbita moschata OX=3662 GN=LOC111439239 PE=4 SV=1)

HSP 1 Score: 524.2 bits (1349), Expect = 3.4e-145
Identity = 264/305 (86.56%), Postives = 277/305 (90.82%), Query Frame = 0


Query: 1   MREEHSNWFSRWEDELPSPDELISLSQTLITPDLALAFDIQNPTNSTSPLPCPSPPLSNP 60
           MREEHSNWFSRWE+ELPSPDEL+ LSQTLITPDLALAFDIQN +N++ PLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNSSNTSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGTVPPNSADFADSADFG----SDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNG  PPNSADF DSAD G    SDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIAPPNSADFGDSADLGSVAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSS---GGGGGAGLLASSDPATD 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSS   GGGGG GL+ASSDP TD
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGGGGGGGLVASSDP-TD 180

Query: 181 HLFASSPVPPHLLHSARAGSDHFLPFVPMATLQQHHHHQQQM-----ASVVAHPQLQPAY 240
           HLFASSPVPPHLLHSAR+ SDHFLPFVPMATLQQHHHHQQ M     A+V  HPQLQP+Y
Sbjct: 181 HLFASSPVPPHLLHSARSTSDHFLPFVPMATLQQHHHHQQHMAAAAAAAVAGHPQLQPSY 240

Query: 241 HQQVGHFGSPPNRQFEHPFLARQSQPIHRMGTPVHSSGPNYIEDLESANASGGRKVLTLF 294
           H+QVGHFGSPPN QFEHPFLARQSQP+HRMG PVH+S PNYIEDLESANA+GGRKVLTLF
Sbjct: 241 HRQVGHFGSPPNGQFEHPFLARQSQPVHRMGAPVHNSIPNYIEDLESANANGGRKVLTLF 300

[Close]

BLAST of Sed0009024 vs. TAIR 10
Match: AT3G10760.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 332.4 bits (851), Expect = 3.6e-91
Identity = 210/349 (60.17%), Postives = 232/349 (66.48%), Query Frame = 0


Query: 1   MREEHSNWFSRWEDELPSPDELISLSQTLITPDLALAFDIQNPT----NSTSP------L 60
           MRE+ S+WF+RWE+ELPSP+EL+ +SQ+LI+PDLALAFDI+ P     NS  P       
Sbjct: 1   MREDDSDWFARWEEELPSPEELMPISQSLISPDLALAFDIRTPNHGNGNSNQPHHHHHHQ 60

Query: 61  PCPSPPLSNPLPGSGNGTVPPNSADF-ADSADFGS-----DEPARTLKRPRLVWTPQLHK 120
             P  P    LP S       +SA+F ADSAD GS     DEPARTLKRPRLVWTPQLHK
Sbjct: 61  TTPPTPSQLQLPSSQAN----SSAEFAADSADLGSGGAAGDEPARTLKRPRLVWTPQLHK 120

Query: 121 RFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGGAGL 180
           RFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGG G   
Sbjct: 121 RFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGAG--- 180

Query: 181 LASSDPATDHLFASSPVPPHLLHSARA-GSDHFLP-FVPMATLQQHHHHQQQM-----AS 240
              SDPATD LFASSPVP H LH  R   SDHF+P FVP+ATLQQ    QQQM     A+
Sbjct: 181 ---SDPATDRLFASSPVPAHFLHPNRVPSSDHFMPSFVPIATLQQ----QQQMAAAAAAA 240

Query: 241 VVAHPQLQ-PAYHQQV--GHFGSPPNRQFEHP--------------------------FL 294
             A+P LQ P +H+Q+   HFGSP N  F  P                          FL
Sbjct: 241 AAANPHLQPPQFHRQIAAAHFGSPTNGGFSSPTSNGQFGSPTSNGFGSPTTNGKFDPSFL 300

[Close]

BLAST of Sed0009024 vs. TAIR 10
Match: AT5G05090.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 283.9 bits (725), Expect = 1.5e-76
Identity = 176/304 (57.89%), Postives = 207/304 (68.09%), Query Frame = 0


Query: 1   MREEHSNWFSRWEDELPSPDELISLSQTLITPDLALAFDI--QNPTNSTSPLPCPSPPLS 60
           MREE SNWF++WE+ELPSP+ELI LSQ+LITPDLA+AFD+   N +NS  PLP  +PP  
Sbjct: 1   MREEDSNWFAKWEEELPSPEELIPLSQSLITPDLAIAFDLHRNNNSNSGQPLPQTTPP-- 60

Query: 61  NPLPGSGNGTVPPNSADFADSADFGSDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNA 120
                      P +SA+ A   D   DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNA
Sbjct: 61  ----------QPNSSAEIA--GDSTGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNA 120

Query: 121 VPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGGAGLLASSDPATDHLFAS 180
           VPKTIMQLMSVDGLTRENVASHLQKYRLYLKRM+  S GGGGG+G        +DHLFAS
Sbjct: 121 VPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMK--SGGGGGGSG-------DSDHLFAS 180

Query: 181 SPVPPHLLH-SARAGSDHFLP-FVPMATLQQHHHHQQQMASVVAHPQLQPAYHQQVG--H 240
           SPVPPH LH ++R  SD F+P FVP++T QQH          +A P  Q   H+Q+   +
Sbjct: 181 SPVPPHFLHPTSRQSSDLFIPSFVPISTQQQH----------IAAPPSQ-FLHRQISAVN 240

Query: 241 FGSPPNRQFEHPFLARQ----SQPIHRMGT-PVHSSGPNYIEDLESANASGGRKVLTLFP 294
           F SP     +  FLARQ     QP+ +  +  +HS   NY +DL+    SG + VLTLFP
Sbjct: 241 FTSPTKATDQAMFLARQQSELQQPVFKPSSLHLHSQVANYTQDLK----SGAKTVLTLFP 266

[Close]

BLAST of Sed0009024 vs. TAIR 10
Match: AT2G40970.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 219.2 bits (557), Expect = 4.5e-57
Identity = 133/237 (56.12%), Postives = 151/237 (63.71%), Query Frame = 0


Query: 1   MREEHSNWFSRWEDELPSPDELISLSQTLITPDLALAFDIQNP----------------- 60
           MRE++ NWF RWE+ELPSP+ELI +SQTLITP LALAF I +P                 
Sbjct: 1   MREDNPNWFLRWEEELPSPEELIPISQTLITPHLALAFQIGSPNHHLGSKRTTAIYHQKL 60

Query: 61  ---TNSTSPLPCPSPPLSNPLPGSGNGTVPPNSADFADSADFGS----DEPARTLKRPRL 120
              T  T+P P P P + N   G G            DS D GS     EPARTLKRPRL
Sbjct: 61  QSSTTPTTPTPTPPPMMMNSDFGGG------------DSTDLGSGSIGGEPARTLKRPRL 120

Query: 121 VWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSS 180
           VWTPQLHKRFVDAV HLGIKNAVPKTIMQLMSV+GLTRENVASHLQKYRLYL+RMQG  +
Sbjct: 121 VWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYRLYLRRMQG-GN 180

Query: 181 GGGGGAGLLASSDPATDHLFASSPVPPHLLHSARAGSDHFLPFVPMATLQQHHHHQQ 214
           G G   G +  SD ATD LFASSPVP H L       D+ +P +  + + +H   QQ
Sbjct: 181 GNGITGGHVIVSDSATDRLFASSPVPAHFL-----SPDYLMPPLEHSYMGKHVITQQ 219

[Close]

BLAST of Sed0009024 vs. TAIR 10
Match: AT3G46640.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 161.0 bits (406), Expect = 1.5e-39
Identity = 116/280 (41.43%), Postives = 144/280 (51.43%), Query Frame = 0


Query: 10  SRWEDELPSPDELISLSQTLITPDLALAFDI----------------------------- 69
           S WE  LPS ++L SLS +LI P+LA+AF I                             
Sbjct: 20  SEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASETTLSSLRGGSSGP 79

Query: 70  -----------QNPTNSTSPLPCPSPPLSNPLPGSGNGTVPPNSADFADSADFGSDE-PA 129
                      ++   S+SP        ++   G   G V P+SA  A+  D G+++   
Sbjct: 80  NTSSSNNNVEEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDPDSAMAAEEGDSGTEDLSG 139

Query: 130 RTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYL 189
           +TLKRPRLVWTPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQKYRLYL
Sbjct: 140 KTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYL 199

Query: 190 KRMQGLSSGGGGGAGLLASSDPATDHLFASSPVPPHLLHSARAG---SDHFLPFVPMATL 246
           KRMQGL++ G            A+D LF+S+PVPP        G   S +    +P A  
Sbjct: 200 KRMQGLTNEG----------PSASDKLFSSTPVPPQSFQDIGGGGGSSGNVGVPIPGAYG 259

[Close]

BLAST of Sed0009024 vs. TAIR 10
Match: AT3G46640.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 161.0 bits (406), Expect = 1.5e-39
Identity = 116/280 (41.43%), Postives = 144/280 (51.43%), Query Frame = 0


Query: 10  SRWEDELPSPDELISLSQTLITPDLALAFDI----------------------------- 69
           S WE  LPS ++L SLS +LI P+LA+AF I                             
Sbjct: 20  SEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASETTLSSLRGGSSGP 79

Query: 70  -----------QNPTNSTSPLPCPSPPLSNPLPGSGNGTVPPNSADFADSADFGSDE-PA 129
                      ++   S+SP        ++   G   G V P+SA  A+  D G+++   
Sbjct: 80  NTSSSNNNVEEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDPDSAMAAEEGDSGTEDLSG 139

Query: 130 RTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYL 189
           +TLKRPRLVWTPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQKYRLYL
Sbjct: 140 KTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYL 199

Query: 190 KRMQGLSSGGGGGAGLLASSDPATDHLFASSPVPPHLLHSARAG---SDHFLPFVPMATL 246
           KRMQGL++ G            A+D LF+S+PVPP        G   S +    +P A  
Sbjct: 200 KRMQGLTNEG----------PSASDKLFSSTPVPPQSFQDIGGGGGSSGNVGVPIPGAYG 259

The following BLAST results are available for this feature:

BLAST of Sed0009024 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144322.1	4.0e-148	89.04	transcription factor MYBC1 [Cucumis sativus] >KGN54684.1 hypothetical protein Cs...	[more]
XP_008455739.1	4.4e-147	88.70	PREDICTED: transcription factor PCL1-like [Cucumis melo] >KAA0025859.1 transcrip...	[more]
XP_038882973.1	9.8e-147	88.37	transcription factor MYBC1-like [Benincasa hispida]	[more]
XP_022967861.1	3.1e-145	86.89	transcription factor MYBC1-like [Cucurbita maxima]	[more]
XP_023543478.1	5.4e-145	86.84	transcription factor MYBC1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0009024 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22210	6.3e-56	56.12	Transcription factor MYBC1 OS=Arabidopsis thaliana OX=3702 GN=MYBC1 PE=1 SV=1	[more]
Q9SNB4	2.0e-38	41.43	Transcription factor LUX OS=Arabidopsis thaliana OX=3702 GN=LUX PE=1 SV=1	[more]
Q94DH3	1.8e-34	44.68	Transcription factor PCL1 OS=Oryza sativa subsp. japonica OX=39947 GN=PCL1 PE=2 ...	[more]
Q9LTH4	5.2e-34	39.92	Transcription factor BOA OS=Arabidopsis thaliana OX=3702 GN=BOA PE=2 SV=1	[more]
A2XE31	6.6e-21	48.31	Two-component response regulator ORR21 OS=Oryza sativa subsp. indica OX=39946 GN...	[more]

BLAST of Sed0009024 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0V3	1.9e-148	89.04	HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G42573...	[more]
A0A5A7SKT7	2.1e-147	88.70	Transcription factor PCL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3C2U8	2.1e-147	88.70	transcription factor PCL1-like OS=Cucumis melo OX=3656 GN=LOC103495840 PE=4 SV=1	[more]
A0A6J1HT87	1.5e-145	86.89	transcription factor MYBC1-like OS=Cucurbita maxima OX=3661 GN=LOC111467241 PE=4...	[more]
A0A6J1F331	3.4e-145	86.56	transcription factor MYBC1-like OS=Cucurbita moschata OX=3662 GN=LOC111439239 PE...	[more]

BLAST of Sed0009024 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10760.1	3.6e-91	60.17	Homeodomain-like superfamily protein	[more]
AT5G05090.1	1.5e-76	57.89	Homeodomain-like superfamily protein	[more]
AT2G40970.1	4.5e-57	56.12	Homeodomain-like superfamily protein	[more]
AT3G46640.1	1.5e-39	41.43	Homeodomain-like superfamily protein	[more]
AT3G46640.2	1.5e-39	41.43	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.10.60		coord: 90..152 e-value: 7.5E-32 score: 111.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..88
None	No IPR available	PANTHER	PTHR31442:SF31	HOMEODOMAIN-LIKE PROTEIN-RELATED	coord: 1..293
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 94..146 e-value: 3.0E-24 score: 83.1
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 97..145 e-value: 2.1E-8 score: 34.2
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 98..149 score: 11.409622
IPR044841	Transcription factor LUX/BOA-like	PANTHER	PTHR31442	HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 1..293
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 90..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0009024.1	Sed0009024.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity