Homology
BLAST of Sed0008955 vs. NCBI nr
Match:
XP_023523920.1 (pentatricopeptide repeat-containing protein At1g14470 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1343.9 bits (3477), Expect = 0.0e+00
Identity = 661/763 (86.63%), Postives = 712/763 (93.32%), Query Frame = 0
Query: 1 MFELVALAPKISSISQMRQLHARLLLNSLHSQNHWVSVLLRMCARFRARPAYAASIFTSS 60
M++LVA+A KIS+ISQ+RQLHA L+LNSL SQN+WVS+LL +C R A P+YAASIFTSS
Sbjct: 1 MYDLVAIATKISNISQLRQLHAHLVLNSLQSQNYWVSLLLTICTRLHAHPSYAASIFTSS 60
Query: 61 PSPDAAVYNCMIKYHFRMGVHDEVVSLFRCMQCLDLRPYSFVYIYLIKLAGKSGNLFHAY 120
P P+A+VY+CM+KY+ RMG HDEVVSLFRCMQCLDLRP+ VYIYLIKLAGKSGNLFHA
Sbjct: 61 PYPNASVYSCMLKYYSRMGAHDEVVSLFRCMQCLDLRPHPSVYIYLIKLAGKSGNLFHAS 120
Query: 121 VLKLGHMDDDFIRNAILDMYAKYGPVDLAWKLFEKMADRTLADWNSMISGCWKSGNEADA 180
VLKLGH+DD FIRNAILDMYAKYG VDLA KLFE+M +RTLADWNSMISGCW SGNEADA
Sbjct: 121 VLKLGHIDDHFIRNAILDMYAKYGQVDLARKLFEQMPNRTLADWNSMISGCWNSGNEADA 180
Query: 181 VMMFNKMPVRNIITWTAMVTGYAKMGNLAIARRYFDEMPERSVVSWNAMLSAYAQNECAE 240
VM+FN MP RN I+WTAMVTGYAKM +L ARRYFDEMPE+SVVSWNAMLSAYAQNECAE
Sbjct: 181 VMLFNMMPDRNTISWTAMVTGYAKMRDLESARRYFDEMPEKSVVSWNAMLSAYAQNECAE 240
Query: 241 EALKLFYQMLREGFTPDDTTWVAAISSCTSIGNPSIADAILTKISQKNIILNNFVRTALL 300
EALKLF++ML+EG TPDDTTWVAAISSC+SIGNP++AD++L KI+QK++ILNN+V+TALL
Sbjct: 241 EALKLFHRMLKEGITPDDTTWVAAISSCSSIGNPNLADSLLAKINQKHVILNNYVKTALL 300
Query: 301 DMHAKFGNLEIAREIFDELGGHRNGNAVTWNIMISAYTKAGKLSSAREMFDNMPKRDVFS 360
DMHAKFGNLEIAR IFDELGG R NAVTWN+MISAYT+AGKLS ARE+FDNMPKRDV S
Sbjct: 301 DMHAKFGNLEIARRIFDELGGQR--NAVTWNVMISAYTRAGKLSLARELFDNMPKRDVVS 360
Query: 361 WNSMIAGYAQNGESAMSIELFKEMIASTDIQPDEVTVASVLSACGHIGALKLSYWVLNIV 420
WNSMIAGYAQNGESAMSI LF+EMI TDIQPDEVT+ASVLSACGHIGALK SYWVLNIV
Sbjct: 361 WNSMIAGYAQNGESAMSIHLFREMIDCTDIQPDEVTIASVLSACGHIGALKFSYWVLNIV 420
Query: 421 QEKNIKLGISGLNSLIFMYSKCGSVVVAQRIFQNMGTRDVVTFNTLISGFAANGHGKEAI 480
QEKNIK GISG NSLIFMYSKCG+VV A RIFQNMGT+DVVTFNTLISGFAANGHGK+AI
Sbjct: 421 QEKNIKFGISGFNSLIFMYSKCGNVVDAHRIFQNMGTKDVVTFNTLISGFAANGHGKDAI 480
Query: 481 KLALTMEEEGIEPDHVTYIGVLTACSHAGLLKEGKNIFKSIKAPTVDHYACMVDLLGRAG 540
KL LTMEEEGIEPDHVTYIGVLTACSHAG+LKEGKNIFKSIKAPTVDHYACMVDLLGRAG
Sbjct: 481 KLLLTMEEEGIEPDHVTYIGVLTACSHAGMLKEGKNIFKSIKAPTVDHYACMVDLLGRAG 540
Query: 541 ELDEAKILIESMPMKPHAGVYGSLLNASRIHKRVELGELAAGKLLELEPQNPGNYVLLSN 600
ELDEAK+LIESMPMKPHAGVYGSLLN SRIHKRVELGELAA KLLELEPQNPGNY+LLSN
Sbjct: 541 ELDEAKMLIESMPMKPHAGVYGSLLNGSRIHKRVELGELAANKLLELEPQNPGNYILLSN 600
Query: 601 IYASAGRWEDVRKVREKMMKGGVKKSVGMSWVEYMGQIHKFSVGDRSHERSKDIYRLLAE 660
IYASAGRWEDVR+VREKM KGGVKKSVGMSWVEY GQIH F+VGDRSHE SKDIYRLLAE
Sbjct: 601 IYASAGRWEDVRQVREKMRKGGVKKSVGMSWVEYKGQIHNFTVGDRSHEWSKDIYRLLAE 660
Query: 661 LERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTWTPIRVVKNL 720
LERKMKRVGFV DKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVG TPIRVVKNL
Sbjct: 661 LERKMKRVGFVTDKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVG--TPIRVVKNL 720
Query: 721 RICLDCHTAIKMISKLEEREIIIRDNNRFHCFSEGICSCHDYW 764
RIC+DCHTAIKMISKLEEREII+RDNNRFHCFSEGICSCHDYW
Sbjct: 721 RICMDCHTAIKMISKLEEREIIVRDNNRFHCFSEGICSCHDYW 759
BLAST of Sed0008955 vs. NCBI nr
Match:
XP_022941407.1 (pentatricopeptide repeat-containing protein At1g14470 [Cucurbita moschata])
HSP 1 Score: 1342.4 bits (3473), Expect = 0.0e+00
Identity = 660/763 (86.50%), Postives = 711/763 (93.18%), Query Frame = 0
Query: 1 MFELVALAPKISSISQMRQLHARLLLNSLHSQNHWVSVLLRMCARFRARPAYAASIFTSS 60
M++LVA+A KIS+ISQ+RQLHA L+LNSL SQN+WVS+LL +C R A P+YAASIFTSS
Sbjct: 1 MYDLVAIATKISNISQLRQLHAHLVLNSLQSQNYWVSLLLTICTRLHAHPSYAASIFTSS 60
Query: 61 PSPDAAVYNCMIKYHFRMGVHDEVVSLFRCMQCLDLRPYSFVYIYLIKLAGKSGNLFHAY 120
P P+A+VY+CM+KY+ RMG HDEVVSLFRCMQCLDLRP+ VYIYLIKLAGKSGNLFHA
Sbjct: 61 PYPNASVYSCMLKYYSRMGAHDEVVSLFRCMQCLDLRPHPSVYIYLIKLAGKSGNLFHAS 120
Query: 121 VLKLGHMDDDFIRNAILDMYAKYGPVDLAWKLFEKMADRTLADWNSMISGCWKSGNEADA 180
VLKLGH+DD FIRNA+LDMYAKYG VDLA KLFE+M +RTLADWNSMISGCW SGNEADA
Sbjct: 121 VLKLGHIDDHFIRNAVLDMYAKYGQVDLARKLFEQMPNRTLADWNSMISGCWNSGNEADA 180
Query: 181 VMMFNKMPVRNIITWTAMVTGYAKMGNLAIARRYFDEMPERSVVSWNAMLSAYAQNECAE 240
VM+FN MP RN I+WTAMVTGYAK +L ARRYFDEMPE+SVVSWNAMLSAYAQNECAE
Sbjct: 181 VMLFNMMPDRNTISWTAMVTGYAKRRDLESARRYFDEMPEKSVVSWNAMLSAYAQNECAE 240
Query: 241 EALKLFYQMLREGFTPDDTTWVAAISSCTSIGNPSIADAILTKISQKNIILNNFVRTALL 300
EALKLF++ML+EG TPDDTTWVAAISSC+SIGNP++AD++L KI+QK++ILNN+V+TALL
Sbjct: 241 EALKLFHRMLKEGITPDDTTWVAAISSCSSIGNPNLADSLLAKINQKHVILNNYVKTALL 300
Query: 301 DMHAKFGNLEIAREIFDELGGHRNGNAVTWNIMISAYTKAGKLSSAREMFDNMPKRDVFS 360
DMHAKFGNLEIAR IFDELGG R NAVTWN+MISAYT+AGKLS ARE+FDNMPKRDV S
Sbjct: 301 DMHAKFGNLEIARRIFDELGGQR--NAVTWNVMISAYTRAGKLSLARELFDNMPKRDVVS 360
Query: 361 WNSMIAGYAQNGESAMSIELFKEMIASTDIQPDEVTVASVLSACGHIGALKLSYWVLNIV 420
WNSMIAGYAQNGESAMSI LF+EMI TDIQPDEVT+ASVLSACGHIGALK SYWVLNIV
Sbjct: 361 WNSMIAGYAQNGESAMSIHLFREMIDCTDIQPDEVTIASVLSACGHIGALKFSYWVLNIV 420
Query: 421 QEKNIKLGISGLNSLIFMYSKCGSVVVAQRIFQNMGTRDVVTFNTLISGFAANGHGKEAI 480
QEKNIK GISG NSLIFMYSKCG+VV A RIFQNMGT+DVVTFNTLISGFAANGHGK+AI
Sbjct: 421 QEKNIKFGISGFNSLIFMYSKCGNVVDAHRIFQNMGTKDVVTFNTLISGFAANGHGKDAI 480
Query: 481 KLALTMEEEGIEPDHVTYIGVLTACSHAGLLKEGKNIFKSIKAPTVDHYACMVDLLGRAG 540
KL LTMEEEGIEPDHVTYIGVLTACSHAG+LKEGKNIFKSIKAPTVDHYACMVDLLGRAG
Sbjct: 481 KLLLTMEEEGIEPDHVTYIGVLTACSHAGMLKEGKNIFKSIKAPTVDHYACMVDLLGRAG 540
Query: 541 ELDEAKILIESMPMKPHAGVYGSLLNASRIHKRVELGELAAGKLLELEPQNPGNYVLLSN 600
ELDEAKILIESMPMKPHAGVYGSLLN SRIHKRVELGELAA KLLELEPQNPGNY+LLSN
Sbjct: 541 ELDEAKILIESMPMKPHAGVYGSLLNGSRIHKRVELGELAANKLLELEPQNPGNYILLSN 600
Query: 601 IYASAGRWEDVRKVREKMMKGGVKKSVGMSWVEYMGQIHKFSVGDRSHERSKDIYRLLAE 660
IYASAGRWEDVR+VREKM KGGVKKSVGMSWVEY GQIH F+VGDRSHE SKDIYRLLAE
Sbjct: 601 IYASAGRWEDVRQVREKMRKGGVKKSVGMSWVEYKGQIHNFTVGDRSHEWSKDIYRLLAE 660
Query: 661 LERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTWTPIRVVKNL 720
LERKMKRVGFV DKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVG TPIRVVKNL
Sbjct: 661 LERKMKRVGFVTDKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVG--TPIRVVKNL 720
Query: 721 RICLDCHTAIKMISKLEEREIIIRDNNRFHCFSEGICSCHDYW 764
RIC+DCHTAIKMISKLEEREII+RDNNRFHCFSEGICSCHDYW
Sbjct: 721 RICMDCHTAIKMISKLEEREIIVRDNNRFHCFSEGICSCHDYW 759
BLAST of Sed0008955 vs. NCBI nr
Match:
XP_022982206.1 (pentatricopeptide repeat-containing protein At1g14470 [Cucurbita maxima])
HSP 1 Score: 1337.8 bits (3461), Expect = 0.0e+00
Identity = 661/763 (86.63%), Postives = 710/763 (93.05%), Query Frame = 0
Query: 1 MFELVALAPKISSISQMRQLHARLLLNSLHSQNHWVSVLLRMCARFRARPAYAASIFTSS 60
M++LVA+A KIS+ISQ+RQLHA L+LNSL SQN+WVS+LL +C R A PAYAASIFTSS
Sbjct: 1 MYDLVAIATKISNISQLRQLHAHLVLNSLQSQNYWVSLLLTICTRLHAHPAYAASIFTSS 60
Query: 61 PSPDAAVYNCMIKYHFRMGVHDEVVSLFRCMQCLDLRPYSFVYIYLIKLAGKSGNLFHAY 120
P P+A+VY+CM+KY+ RMG HDEVVSLFRCMQCLDLRP+ VYIYLIKLAGKSGNLFHA
Sbjct: 61 PYPNASVYSCMLKYYSRMGAHDEVVSLFRCMQCLDLRPHPSVYIYLIKLAGKSGNLFHAS 120
Query: 121 VLKLGHMDDDFIRNAILDMYAKYGPVDLAWKLFEKMADRTLADWNSMISGCWKSGNEADA 180
VLKLGH+DD FIRN ILDMYAKYG VDLA KLFE+M +RTLADWNSMISGCW SGNEADA
Sbjct: 121 VLKLGHIDDHFIRNTILDMYAKYGQVDLARKLFEQMPNRTLADWNSMISGCWNSGNEADA 180
Query: 181 VMMFNKMPVRNIITWTAMVTGYAKMGNLAIARRYFDEMPERSVVSWNAMLSAYAQNECAE 240
VM+F+ MP RN I+WTAMVTGYAKM +L ARRYFDEMPE+SVVSWNAMLSAYAQNECAE
Sbjct: 181 VMLFSMMPDRNTISWTAMVTGYAKMRDLETARRYFDEMPEKSVVSWNAMLSAYAQNECAE 240
Query: 241 EALKLFYQMLREGFTPDDTTWVAAISSCTSIGNPSIADAILTKISQKNIILNNFVRTALL 300
EALKLF++ML+EG TPDDTTWVAAISSC+SIGN S+AD++L KI+QK++ILNNFV+TALL
Sbjct: 241 EALKLFHRMLKEGITPDDTTWVAAISSCSSIGNLSLADSLLAKINQKHVILNNFVKTALL 300
Query: 301 DMHAKFGNLEIAREIFDELGGHRNGNAVTWNIMISAYTKAGKLSSAREMFDNMPKRDVFS 360
DMHAKFGNLEIAR IFDELGG R NAVTWN+MISAYT+AGKLS ARE+FDNMPKRDV S
Sbjct: 301 DMHAKFGNLEIARGIFDELGGQR--NAVTWNVMISAYTRAGKLSLARELFDNMPKRDVVS 360
Query: 361 WNSMIAGYAQNGESAMSIELFKEMIASTDIQPDEVTVASVLSACGHIGALKLSYWVLNIV 420
WNSMIAGYAQNGESAMSI LF+EMI TDIQPDEVT+ASVLSACGHIGALK S WVLNIV
Sbjct: 361 WNSMIAGYAQNGESAMSIHLFREMIDCTDIQPDEVTIASVLSACGHIGALKFSCWVLNIV 420
Query: 421 QEKNIKLGISGLNSLIFMYSKCGSVVVAQRIFQNMGTRDVVTFNTLISGFAANGHGKEAI 480
QEKNIK GISG NSLIFMYSKCG+VV A RIFQNMGT+DVVTFNTLISGFAANGHGK+AI
Sbjct: 421 QEKNIKFGISGFNSLIFMYSKCGNVVDAHRIFQNMGTKDVVTFNTLISGFAANGHGKDAI 480
Query: 481 KLALTMEEEGIEPDHVTYIGVLTACSHAGLLKEGKNIFKSIKAPTVDHYACMVDLLGRAG 540
KL LTMEEEGIEPDHVTYIGVLTACSHAG+LKEGKNIFKSIKAPTVDHYACMVDLLGRAG
Sbjct: 481 KLLLTMEEEGIEPDHVTYIGVLTACSHAGMLKEGKNIFKSIKAPTVDHYACMVDLLGRAG 540
Query: 541 ELDEAKILIESMPMKPHAGVYGSLLNASRIHKRVELGELAAGKLLELEPQNPGNYVLLSN 600
ELD+AKILIESMPMKPHAGVYGSLLNASRIHKRVELGELAA KLLELEPQNPGNY+LLSN
Sbjct: 541 ELDDAKILIESMPMKPHAGVYGSLLNASRIHKRVELGELAANKLLELEPQNPGNYILLSN 600
Query: 601 IYASAGRWEDVRKVREKMMKGGVKKSVGMSWVEYMGQIHKFSVGDRSHERSKDIYRLLAE 660
IYASAGRWEDVR+VREKM KGGVKKSVGMSWVEY GQIH F+VGDRSHE SKDIYRLLAE
Sbjct: 601 IYASAGRWEDVRQVREKMRKGGVKKSVGMSWVEYKGQIHNFTVGDRSHEWSKDIYRLLAE 660
Query: 661 LERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTWTPIRVVKNL 720
LERKMKRVGFV DKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVG TPIRVVKNL
Sbjct: 661 LERKMKRVGFVTDKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVG--TPIRVVKNL 720
Query: 721 RICLDCHTAIKMISKLEEREIIIRDNNRFHCFSEGICSCHDYW 764
RIC+DCHTAIKMISKLEEREII+RDNNRFHCFSEGICSCHDYW
Sbjct: 721 RICMDCHTAIKMISKLEEREIIVRDNNRFHCFSEGICSCHDYW 759
BLAST of Sed0008955 vs. NCBI nr
Match:
XP_022133377.1 (pentatricopeptide repeat-containing protein At1g14470-like isoform X1 [Momordica charantia])
HSP 1 Score: 1321.2 bits (3418), Expect = 0.0e+00
Identity = 655/763 (85.85%), Postives = 701/763 (91.87%), Query Frame = 0
Query: 1 MFELVALAPKISSISQMRQLHARLLLNSLHSQNHWVSVLLRMCARFRARPAYAASIFTSS 60
M +L A+ KIS ISQ+RQLHA L+LNSLHS N+WVS+L+ +C +A PAYAASIFTSS
Sbjct: 1 MSKLGAIVTKISYISQLRQLHAHLVLNSLHSHNYWVSLLITLCTHLQAHPAYAASIFTSS 60
Query: 61 PSPDAAVYNCMIKYHFRMGVHDEVVSLFRCMQCLDLRPYSFVYIYLIKLAGKSGNLFHAY 120
SP +VY+CM+KY+ RMG H+EVVS+FRCMQCLDLRP+ FVYIYLIKLAGKSGNLFHAY
Sbjct: 61 TSPSVSVYSCMLKYYSRMGAHNEVVSIFRCMQCLDLRPHPFVYIYLIKLAGKSGNLFHAY 120
Query: 121 VLKLGHMDDDFIRNAILDMYAKYGPVDLAWKLFEKMADRTLADWNSMISGCWKSGNEADA 180
VLKLGH+DD F+RNAILDMYAKYG VDLA KLFE+MADRTLADWNSMISG WKSG EADA
Sbjct: 121 VLKLGHIDDHFVRNAILDMYAKYGQVDLARKLFEQMADRTLADWNSMISGYWKSGKEADA 180
Query: 181 VMMFNKMPVRNIITWTAMVTGYAKMGNLAIARRYFDEMPERSVVSWNAMLSAYAQNECAE 240
VM+FN MP RNIITWTAMVTGYAKM +L ARRYFD+MPERSVVSWNAMLSAYAQNECAE
Sbjct: 181 VMLFNMMPARNIITWTAMVTGYAKMKDLESARRYFDQMPERSVVSWNAMLSAYAQNECAE 240
Query: 241 EALKLFYQMLREGFTPDDTTWVAAISSCTSIGNPSIADAILTKISQKNIILNNFVRTALL 300
EALKLF QML+EG PDDTTWVAAISSC+S+GNPS+AD I+ KI+QK+IILNNFV+TALL
Sbjct: 241 EALKLFQQMLKEGIAPDDTTWVAAISSCSSVGNPSLADYIIRKINQKHIILNNFVKTALL 300
Query: 301 DMHAKFGNLEIAREIFDELGGHRNGNAVTWNIMISAYTKAGKLSSAREMFDNMPKRDVFS 360
DMHAKFGNLEIAREIFDELGG R NAVTWNIMISAYT++GKL ARE+FDNMPKRDV S
Sbjct: 301 DMHAKFGNLEIAREIFDELGGQR--NAVTWNIMISAYTRSGKLLLARELFDNMPKRDVVS 360
Query: 361 WNSMIAGYAQNGESAMSIELFKEMIASTDIQPDEVTVASVLSACGHIGALKLSYWVLNIV 420
WNSMIAGYAQNGESAMSIELFKEMI TDIQPDEVT+ASVLSACGHIGA KLSY V+NIV
Sbjct: 361 WNSMIAGYAQNGESAMSIELFKEMITCTDIQPDEVTIASVLSACGHIGASKLSYLVVNIV 420
Query: 421 QEKNIKLGISGLNSLIFMYSKCGSVVVAQRIFQNMGTRDVVTFNTLISGFAANGHGKEAI 480
QEKNIKLGIS NSLIFMYSKCG++ A RIFQNMGTRDVVTFNTLISGFAANG GKEAI
Sbjct: 421 QEKNIKLGISAFNSLIFMYSKCGNMAHAHRIFQNMGTRDVVTFNTLISGFAANGRGKEAI 480
Query: 481 KLALTMEEEGIEPDHVTYIGVLTACSHAGLLKEGKNIFKSIKAPTVDHYACMVDLLGRAG 540
+L L MEEEGIEPDHVTYIGVLTACSHAGLLKEGKNIFKSIKAPTVDHYACMVDLLGRAG
Sbjct: 481 ELVLKMEEEGIEPDHVTYIGVLTACSHAGLLKEGKNIFKSIKAPTVDHYACMVDLLGRAG 540
Query: 541 ELDEAKILIESMPMKPHAGVYGSLLNASRIHKRVELGELAAGKLLELEPQNPGNYVLLSN 600
ELDEAKILI+SMPMKPHAGVYGSLLNASRIHKRVELGELAA KL ELEPQNPGNYVLLSN
Sbjct: 541 ELDEAKILIQSMPMKPHAGVYGSLLNASRIHKRVELGELAANKLFELEPQNPGNYVLLSN 600
Query: 601 IYASAGRWEDVRKVREKMMKGGVKKSVGMSWVEYMGQIHKFSVGDRSHERSKDIYRLLAE 660
IYASAGRWEDV+ VREKM K GVKKSVGMSWVEY GQ+HKF VGDRSHE S+DIYRLLAE
Sbjct: 601 IYASAGRWEDVKMVREKMKKVGVKKSVGMSWVEYKGQVHKFIVGDRSHEWSRDIYRLLAE 660
Query: 661 LERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTWTPIRVVKNL 720
LERKMKRVGFVADKSCALRDVEEEEKEEM+GTHSEKLAICFALLVSEVG TPIRVVKNL
Sbjct: 661 LERKMKRVGFVADKSCALRDVEEEEKEEMVGTHSEKLAICFALLVSEVG--TPIRVVKNL 720
Query: 721 RICLDCHTAIKMISKLEEREIIIRDNNRFHCFSEGICSCHDYW 764
RICLDCHTAIKM+SKLEER I++RDNNRFHCFSEGICSCHDYW
Sbjct: 721 RICLDCHTAIKMVSKLEERVIVVRDNNRFHCFSEGICSCHDYW 759
BLAST of Sed0008955 vs. NCBI nr
Match:
XP_038898615.1 (pentatricopeptide repeat-containing protein At1g14470 [Benincasa hispida])
HSP 1 Score: 1306.2 bits (3379), Expect = 0.0e+00
Identity = 642/763 (84.14%), Postives = 697/763 (91.35%), Query Frame = 0
Query: 1 MFELVALAPKISSISQMRQLHARLLLNSLHSQNHWVSVLLRMCARFRARPAYAASIFTSS 60
M EL A+A KIS+I Q+RQLH L+LNSLHS N+WVS+LL C R A PAY ASIFTSS
Sbjct: 1 MSELGAIASKISNIRQLRQLHGHLVLNSLHSHNYWVSLLLINCTRLHAHPAYVASIFTSS 60
Query: 61 PSPDAAVYNCMIKYHFRMGVHDEVVSLFRCMQCLDLRPYSFVYIYLIKLAGKSGNLFHAY 120
PSP+ +VY+CM+KY+ RMG H+EVVSLFRCMQ LDLRP FVYIYLIKLAGKSGNLFHAY
Sbjct: 61 PSPNGSVYSCMLKYYSRMGAHNEVVSLFRCMQSLDLRPQPFVYIYLIKLAGKSGNLFHAY 120
Query: 121 VLKLGHMDDDFIRNAILDMYAKYGPVDLAWKLFEKMADRTLADWNSMISGCWKSGNEADA 180
VLKLGH+DD FIRNAILDMYAKYG VDLA KLF +MA+RTLADWNSMISGCWKSGNE DA
Sbjct: 121 VLKLGHVDDQFIRNAILDMYAKYGQVDLARKLFAQMAERTLADWNSMISGCWKSGNETDA 180
Query: 181 VMMFNKMPVRNIITWTAMVTGYAKMGNLAIARRYFDEMPERSVVSWNAMLSAYAQNECAE 240
VM+FN+MP RNIITWTAMVTGYAKMG+L ARRYFDEMPERSVVSWNA+LSAYAQN CAE
Sbjct: 181 VMLFNEMPDRNIITWTAMVTGYAKMGDLETARRYFDEMPERSVVSWNAILSAYAQNGCAE 240
Query: 241 EALKLFYQMLREGFTPDDTTWVAAISSCTSIGNPSIADAILTKISQKNIILNNFVRTALL 300
EALKLF++ML+EG TPDDTTWVA ISSC+SI NP++AD+IL KI+Q++ ILN+FV+TALL
Sbjct: 241 EALKLFHRMLKEGITPDDTTWVATISSCSSISNPTLADSILRKINQQHNILNSFVKTALL 300
Query: 301 DMHAKFGNLEIAREIFDELGGHRNGNAVTWNIMISAYTKAGKLSSAREMFDNMPKRDVFS 360
DMHAKFGNLEIAR IFDELGG R N VTWN+MISAY + GKLS A+E+FDNMPKRDV S
Sbjct: 301 DMHAKFGNLEIARNIFDELGGQR--NVVTWNVMISAYMRVGKLSLAQELFDNMPKRDVVS 360
Query: 361 WNSMIAGYAQNGESAMSIELFKEMIASTDIQPDEVTVASVLSACGHIGALKLSYWVLNIV 420
WNSMI GYAQNGESA SIELFKEMI+ DIQPDEVT+ASVLSACGHIGALKLSYWVL+IV
Sbjct: 361 WNSMIVGYAQNGESAKSIELFKEMISCNDIQPDEVTIASVLSACGHIGALKLSYWVLDIV 420
Query: 421 QEKNIKLGISGLNSLIFMYSKCGSVVVAQRIFQNMGTRDVVTFNTLISGFAANGHGKEAI 480
+EKNIKLG+SG NSLIFMYSKCGSV A RIFQ M TRDVV+FNTLISGFAANGHGKEAI
Sbjct: 421 REKNIKLGLSGFNSLIFMYSKCGSVADAHRIFQTMETRDVVSFNTLISGFAANGHGKEAI 480
Query: 481 KLALTMEEEGIEPDHVTYIGVLTACSHAGLLKEGKNIFKSIKAPTVDHYACMVDLLGRAG 540
KL LTMEEEGIEPDHVTYIGVLTACSHAGLLKEGKN+FKSIKAPTVDHYACMVDLLGRAG
Sbjct: 481 KLVLTMEEEGIEPDHVTYIGVLTACSHAGLLKEGKNVFKSIKAPTVDHYACMVDLLGRAG 540
Query: 541 ELDEAKILIESMPMKPHAGVYGSLLNASRIHKRVELGELAAGKLLELEPQNPGNYVLLSN 600
ELDEAK+L++ MPM+PHAGV+GSLLNASRIHKRVELGELAA KL ELEPQNPGNYVLLSN
Sbjct: 541 ELDEAKLLMQLMPMEPHAGVFGSLLNASRIHKRVELGELAASKLFELEPQNPGNYVLLSN 600
Query: 601 IYASAGRWEDVRKVREKMMKGGVKKSVGMSWVEYMGQIHKFSVGDRSHERSKDIYRLLAE 660
IYASAGRWEDV+K+REKM +GGVKKSVGMSWVEY GQ+HKF VGDRSHERSKDIYRLLAE
Sbjct: 601 IYASAGRWEDVKKIREKMREGGVKKSVGMSWVEYKGQVHKFIVGDRSHERSKDIYRLLAE 660
Query: 661 LERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTWTPIRVVKNL 720
LERKMK GFV DKSCALRDVEEEEKEEMLGTHSEKLAICFALL+SEVG TPIRVVKNL
Sbjct: 661 LERKMKTFGFVTDKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVG--TPIRVVKNL 720
Query: 721 RICLDCHTAIKMISKLEEREIIIRDNNRFHCFSEGICSCHDYW 764
RICLDCHTAIKMISKLEEREI++RDNNRFHCFS+GICSC DYW
Sbjct: 721 RICLDCHTAIKMISKLEEREIVVRDNNRFHCFSDGICSCRDYW 759
BLAST of Sed0008955 vs. ExPASy Swiss-Prot
Match:
Q9M9R6 (Pentatricopeptide repeat-containing protein At1g14470 OS=Arabidopsis thaliana OX=3702 GN=PCMP-A4 PE=2 SV=2)
HSP 1 Score: 529.6 bits (1363), Expect = 5.7e-149
Identity = 268/534 (50.19%), Postives = 372/534 (69.66%), Query Frame = 0
Query: 4 LVALAPKISSISQMRQLHARLLL-NSLHSQNHWVSVLLRMCARFRARPAYAASIFTSSPS 63
L A+A + + Q+ Q+HA+L++ NSL Q++W S ++ C R RA Y IF S
Sbjct: 9 LAAIASQALTFPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTF 68
Query: 64 PDAAVYNCMIKYHFRMGVHDEVVSLFRCMQCLDLRPYSFVYIYLIKLAGKSGNLFHAYVL 123
P+ V N M KY +M + ++V+ L+ + P +F + +IK AG+ G LF A V
Sbjct: 69 PNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQALVE 128
Query: 124 KLGHMDDDFIRNAILDMYAKYGPVDLAWKLFEKMADRTLADWNSMISGCWKSGNEADAVM 183
KLG D ++RN I+DMY K+ V+ A K+F++++ R +DWN MISG WK GN+ +A
Sbjct: 129 KLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACK 188
Query: 184 MFNKMPVRNIITWTAMVTGYAKMGNLAIARRYFDEMPERSVVSWNAMLSAYAQNECAEEA 243
+F+ MP ++++WT M+TG+AK+ +L AR+YFD MPE+SVVSWNAMLS YAQN E+A
Sbjct: 189 LFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDA 248
Query: 244 LKLFYQMLREGFTPDDTTWVAAISSCTSIGNPSIADAILTKISQKNIILNNFVRTALLDM 303
L+LF MLR G P++TTWV IS+C+ +PS+ +++ I +K + LN FV+TALLDM
Sbjct: 249 LRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDM 308
Query: 304 HAKFGNLEIAREIFDELGGHRNGNAVTWNIMISAYTKAGKLSSAREMFDNMPKRDVFSWN 363
HAK +++ AR IF+ELG R N VTWN MIS YT+ G +SSAR++FD MPKR+V SWN
Sbjct: 309 HAKCRDIQSARRIFNELGTQR--NLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWN 368
Query: 364 SMIAGYAQNGESAMSIELFKEMIASTDIQPDEVTVASVLSACGHIGALKLSYWVLNIVQE 423
S+IAGYA NG++A++IE F++MI D +PDEVT+ SVLSACGH+ L+L +++ +++
Sbjct: 369 SLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRK 428
Query: 424 KNIKLGISGLNSLIFMYSKCGSVVVAQRIFQNMGTRDVVTFNTLISGFAANGHGKEAIKL 483
IKL SG SLIFMY++ G++ A+R+F M RDVV++NTL + FAANG G E + L
Sbjct: 429 NQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNL 488
Query: 484 ALTMEEEGIEPDHVTYIGVLTACSHAGLLKEGKNIFKSIKAPTVDHYACMVDLL 537
M++EGIEPD VTY VLTAC+ AGLLKEG+ IFKSI+ P DHYACM DLL
Sbjct: 489 LSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRNPLADHYACM-DLL 539
BLAST of Sed0008955 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 508.1 bits (1307), Expect = 1.8e-142
Identity = 277/777 (35.65%), Postives = 448/777 (57.66%), Query Frame = 0
Query: 5 VALAPKISSISQMRQLHARLLLNSLHSQNHWVSVLLRMC---ARFRARPAYAASIFTSSP 64
++L ++ +R +HA+++ LH+ N+ +S L+ C F P YA S+F +
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLP-YAISVFKTIQ 96
Query: 65 SPDAAVYNCMIKYHFRMGVHDEVVSLFRCMQCLDLRPYSFVYIYLIKLAGKS-----GNL 124
P+ ++N M + H + L+ CM L L P S+ + +++K KS G
Sbjct: 97 EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 156
Query: 125 FHAYVLKLGHMDDDFIRNAILDMYAKYGPVDLAWKLFEKMADRTLADWNSMISGCWKSGN 184
H +VLKLG D ++ +++ MY + G ++
Sbjct: 157 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLE----------------------------- 216
Query: 185 EADAVMMFNKMPVRNIITWTAMVTGYAKMGNLAIARRYFDEMPERSVVSWNAMLSAYAQN 244
DA +F+K P R+++++TA++ GYA G + A++ FDE+P + VVSWNAM+S YA+
Sbjct: 217 --DAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAET 276
Query: 245 ECAEEALKLFYQMLREGFTPDDTTWVAAISSCTSIGNPSIADAILTKISQKNIILNNFVR 304
+EAL+LF M++ PD++T V +S+C
Sbjct: 277 GNYKEALELFKDMMKTNVRPDESTMVTVVSAC---------------------------- 336
Query: 305 TALLDMHAKFGNLEIAREIFDELGGHRNG-NAVTWNIMISAYTKAGKLSSAREMFDNMPK 364
A+ G++E+ R++ + H G N N +I Y+K G+L +A +F+ +P
Sbjct: 337 -------AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 396
Query: 365 RDVFSWNSMIAGYAQNGESAMSIELFKEMIASTDIQPDEVTVASVLSACGHIGALKLSYW 424
+DV SWN++I GY ++ LF+EM+ S + P++VT+ S+L AC H+GA+ + W
Sbjct: 397 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDIGRW 456
Query: 425 VLNIVQEKNIKLGISGLN----SLIFMYSKCGSVVVAQRIFQNMGTRDVVTFNTLISGFA 484
+ ++ +K +K G++ + SLI MY+KCG + A ++F ++ + + ++N +I GFA
Sbjct: 457 I-HVYIDKRLK-GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFA 516
Query: 485 ANGHGKEAIKLALTMEEEGIEPDHVTYIGVLTACSHAGLLKEGKNIFKSI-----KAPTV 544
+G + L M + GI+PD +T++G+L+ACSH+G+L G++IF+++ P +
Sbjct: 517 MHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKL 576
Query: 545 DHYACMVDLLGRAGELDEAKILIESMPMKPHAGVYGSLLNASRIHKRVELGELAAGKLLE 604
+HY CM+DLLG +G EA+ +I M M+P ++ SLL A ++H VELGE A L++
Sbjct: 577 EHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIK 636
Query: 605 LEPQNPGNYVLLSNIYASAGRWEDVRKVREKMMKGGVKKSVGMSWVEYMGQIHKFSVGDR 664
+EP+NPG+YVLLSNIYASAGRW +V K R + G+KK G S +E +H+F +GD+
Sbjct: 637 IEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDK 696
Query: 665 SHERSKDIYRLLAELERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVS 724
H R+++IY +L E+E +++ GFV D S L+++EEE KE L HSEKLAI F L+ +
Sbjct: 697 FHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLIST 741
Query: 725 EVGTWTPIRVVKNLRICLDCHTAIKMISKLEEREIIIRDNNRFHCFSEGICSCHDYW 764
+ G T + +VKNLR+C +CH A K+ISK+ +REII RD RFH F +G+CSC+DYW
Sbjct: 757 KPG--TKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
BLAST of Sed0008955 vs. ExPASy Swiss-Prot
Match:
Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)
HSP 1 Score: 506.5 bits (1303), Expect = 5.2e-142
Identity = 278/717 (38.77%), Postives = 422/717 (58.86%), Query Frame = 0
Query: 53 AASIFTSSPSPDAAVYNCMIKYHFRMGVHDEVVSLFRCMQCLDLRPYSFVYIYLIKLAGK 112
A +F P + YN MI + R G + LF M DL ++ +IK +
Sbjct: 83 ALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWN----VMIKGYVR 142
Query: 113 SGNLFHAYVL-KLGHMDDDFIRNAILDMYAKYGPVDLAWKLFEKMADRTLADWNSMISGC 172
+ NL A L ++ D N +L YA+ G VD A +F++M ++ WN+++S
Sbjct: 143 NRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAY 202
Query: 173 WKSGNEADAVMMFNKMPVRNIITWTAMVTGYAKMGNLAIARRYFDEMPERSVVSWNAMLS 232
++ +A M+F +++W ++ G+ K + AR++FD M R VVSWN +++
Sbjct: 203 VQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIIT 262
Query: 233 AYAQNECAEEALKLFYQMLREGFTPDDTTWVAAISSCTSIGNPSIADAILTKISQKNIIL 292
YAQ+ +EA +LF E D TW A +S A + K+ ++N +
Sbjct: 263 GYAQSGKIDEARQLF----DESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVS 322
Query: 293 NNFVRTALLDMHAKFGNLEIAREIFDELGGHRNGNAVTWNIMISAYTKAGKLSSAREMFD 352
N A+L + + +E+A+E+FD + N TWN MI+ Y + GK+S A+ +FD
Sbjct: 323 WN----AMLAGYVQGERMEMAKELFDVMPCR---NVSTWNTMITGYAQCGKISEAKNLFD 382
Query: 353 NMPKRDVFSWNSMIAGYAQNGESAMSIELFKEMIASTDIQPDEVTVASVLSACGHIGALK 412
MPKRD SW +MIAGY+Q+G S ++ LF +M + + + +S LS C + AL+
Sbjct: 383 KMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGG-RLNRSSFSSALSTCADVVALE 442
Query: 413 LSYWVLNIVQEKNIKLGISGLNSLIFMYSKCGSVVVAQRIFQNMGTRDVVTFNTLISGFA 472
L + + + + G N+L+ MY KCGS+ A +F+ M +D+V++NT+I+G++
Sbjct: 443 LGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYS 502
Query: 473 ANGHGKEAIKLALTMEEEGIEPDHVTYIGVLTACSHAGLLKEGKNIFKSIK-----APTV 532
+G G+ A++ +M+ EG++PD T + VL+ACSH GL+ +G+ F ++ P
Sbjct: 503 RHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNS 562
Query: 533 DHYACMVDLLGRAGELDEAKILIESMPMKPHAGVYGSLLNASRIHKRVELGELAAGKLLE 592
HYACMVDLLGRAG L++A L+++MP +P A ++G+LL ASR+H EL E AA K+
Sbjct: 563 QHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFA 622
Query: 593 LEPQNPGNYVLLSNIYASAGRWEDVRKVREKMMKGGVKKSVGMSWVEYMGQIHKFSVGDR 652
+EP+N G YVLLSN+YAS+GRW DV K+R +M GVKK G SW+E + H FSVGD
Sbjct: 623 MEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDE 682
Query: 653 SHERSKDIYRLLAELERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVS 712
H +I+ L EL+ +MK+ G+V+ S L DVEEEEKE M+ HSE+LA+ + ++
Sbjct: 683 FHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIM-- 742
Query: 713 EVGTWTPIRVVKNLRICLDCHTAIKMISKLEEREIIIRDNNRFHCFSEGICSCHDYW 764
V + PIRV+KNLR+C DCH AIK ++++ R II+RDNNRFH F +G CSC DYW
Sbjct: 743 RVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
BLAST of Sed0008955 vs. ExPASy Swiss-Prot
Match:
Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)
HSP 1 Score: 490.3 bits (1261), Expect = 3.8e-137
Identity = 289/813 (35.55%), Postives = 444/813 (54.61%), Query Frame = 0
Query: 13 SISQMRQLHARLLLNSLHSQNHWVSVLLRMCAR-----FRARPAYAASIFTSSPSPDAA- 72
+I +++ H L L + VS + ++ AR R ++A +F +S S
Sbjct: 44 TIDELKMFHRSLTKQGLDND---VSTITKLVARSCELGTRESLSFAKEVFENSESYGTCF 103
Query: 73 VYNCMIKYHFRMGVHDEVVSLFRCMQCLDLRPYSFVYIYLIKLAGKS-----GNLFHAYV 132
+YN +I+ + G+ +E + LF M + P + + + + KS G H +
Sbjct: 104 MYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 163
Query: 133 LKLGHMDDDFIRNAILDMYAKYGPVDLAWKLFEKMADRTLADWNSMISGCWKSGNEADAV 192
+K+G+ D F++N+++ YA+ G +D A K+F++M++R + W SMI G + DAV
Sbjct: 164 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 223
Query: 193 MMFNKMPVR-----------------------------------------NIITWTAMVT 252
+F +M VR N + +A+V
Sbjct: 224 DLFFRM-VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVD 283
Query: 253 GYAKMGNLAIARRYFDEMPERSVVSWNAMLSAYAQNECAEEALKLFYQMLREGFTPDDTT 312
Y K + +A+R FDE ++ NAM S Y + EAL +F M+ G PD +
Sbjct: 284 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 343
Query: 313 WVAAISSCTSIGNPSIADAILTKISQKNIILNNF-----VRTALLDMHAKFGNLEIAREI 372
++AISSC+ + N + K ++ N F + AL+DM+ K + A I
Sbjct: 344 MLSAISSCSQLRN-----ILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRI 403
Query: 373 FDELGGHRNGNAVTWNIMISAYTKAGKLSSAREMFDNMPKRDVFSWNSMIAGYAQNGESA 432
FD + N VTWN +++ Y + G++ +A E F+ MP++++ SWN++I+G Q
Sbjct: 404 FDRMS---NKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 463
Query: 433 MSIELFKEMIASTDIQPDEVTVASVLSACGHIGALKLSYWVLNIVQEKNIKLGISGLNSL 492
+IE+F M + + D VT+ S+ SACGH+GAL L+ W+ +++ I+L + +L
Sbjct: 464 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 523
Query: 493 IFMYSKCGSVVVAQRIFQNMGTRDVVTFNTLISGFAANGHGKEAIKLALTMEEEGIEPDH 552
+ M+S+CG A IF ++ RDV + I A G+ + AI+L M E+G++PD
Sbjct: 524 VDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDG 583
Query: 553 VTYIGVLTACSHAGLLKEGKNIFKSI-----KAPTVDHYACMVDLLGRAGELDEAKILIE 612
V ++G LTACSH GL+++GK IF S+ +P HY CMVDLLGRAG L+EA LIE
Sbjct: 584 VAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE 643
Query: 613 SMPMKPHAGVYGSLLNASRIHKRVELGELAAGKLLELEPQNPGNYVLLSNIYASAGRWED 672
MPM+P+ ++ SLL A R+ VE+ AA K+ L P+ G+YVLLSN+YASAGRW D
Sbjct: 644 DMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWND 703
Query: 673 VRKVREKMMKGGVKKSVGMSWVEYMGQIHKFSVGDRSHERSKDIYRLLAELERKMKRVGF 732
+ KVR M + G++K G S ++ G+ H+F+ GD SH +I +L E+ ++ +G
Sbjct: 704 MAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGH 763
Query: 733 VADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTWTPIRVVKNLRICLDCHTAI 764
V D S L DV+E+EK ML HSEKLA+ + L+ S G T IR+VKNLR+C DCH+
Sbjct: 764 VPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKG--TTIRIVKNLRVCSDCHSFA 823
BLAST of Sed0008955 vs. ExPASy Swiss-Prot
Match:
Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)
HSP 1 Score: 473.8 bits (1218), Expect = 3.7e-132
Identity = 263/758 (34.70%), Postives = 421/758 (55.54%), Query Frame = 0
Query: 20 LHARLLLNS--LHSQNHWVSVLLRMCARFRARPAYAASIFTSSPSPDAAVYNCMIKYHFR 79
LHAR L + L + W +VL R F P D+ + MI +
Sbjct: 66 LHARKLFDEMPLRTAFSWNTVLSAYSK--RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 125
Query: 80 MGVHDEVVSLFRCMQCLDLRPYSFVYIYLIKLAG-----KSGNLFHAYVLKLGHMDDDFI 139
+G + + + + M + P F ++ ++G H++++KLG + +
Sbjct: 126 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 185
Query: 140 RNAILDMYAKYGPVDLAWKLFEKMADRTLADWNSMISGCWKSGNEADAVMMFNKMPVRNI 199
N++L+MYA K G+ A +F++M VR+I
Sbjct: 186 SNSLLNMYA-------------------------------KCGDPMMAKFVFDRMVVRDI 245
Query: 200 ITWTAMVTGYAKMGNLAIARRYFDEMPERSVVSWNAMLSAYAQNECAEEALKLFYQMLRE 259
+W AM+ + ++G + +A F++M ER +V+WN+M+S + Q AL +F +MLR+
Sbjct: 246 SSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRD 305
Query: 260 G-FTPDDTTWVAAISSCTSIGNPSIADAILTKISQKNIILNNFVRTALLDMHAKFGNLEI 319
+PD T + +S+C ++ I I + I ++ V AL+ M+++ G +E
Sbjct: 306 SLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVET 365
Query: 320 AREIFDELGGHRNGNAVTWNIMISAYTKAGKLSSAREMFDNMPKRDVFSWNSMIAGYAQN 379
AR + ++ G ++ + ++ Y K G ++ A+ +F ++ RDV +W +MI GY Q+
Sbjct: 366 ARRLIEQ-RGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQH 425
Query: 380 GESAMSIELFKEMIASTDIQPDEVTVASVLSACGHIGALKLSYWVLNIVQEKNIKLGISG 439
G +I LF+ M+ +P+ T+A++LS + +L + + +S
Sbjct: 426 GSYGEAINLFRSMVGGGQ-RPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSV 485
Query: 440 LNSLIFMYSKCGSVVVAQRIFQNMG-TRDVVTFNTLISGFAANGHGKEAIKLALTMEEEG 499
N+LI MY+K G++ A R F + RD V++ ++I A +GH +EA++L TM EG
Sbjct: 486 SNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEG 545
Query: 500 IEPDHVTYIGVLTACSHAGLLKEGKNIFKSIK-----APTVDHYACMVDLLGRAGELDEA 559
+ PDH+TY+GV +AC+HAGL+ +G+ F +K PT+ HYACMVDL GRAG L EA
Sbjct: 546 LRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEA 605
Query: 560 KILIESMPMKPHAGVYGSLLNASRIHKRVELGELAAGKLLELEPQNPGNYVLLSNIYASA 619
+ IE MP++P +GSLL+A R+HK ++LG++AA +LL LEP+N G Y L+N+Y++
Sbjct: 606 QEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSAC 665
Query: 620 GRWEDVRKVREKMMKGGVKKSVGMSWVEYMGQIHKFSVGDRSHERSKDIYRLLAELERKM 679
G+WE+ K+R+ M G VKK G SW+E ++H F V D +H +IY + ++ ++
Sbjct: 666 GKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEI 725
Query: 680 KRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTWTPIRVVKNLRICLD 739
K++G+V D + L D+EEE KE++L HSEKLAI F L+ T +R++KNLR+C D
Sbjct: 726 KKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLI--STPDKTTLRIMKNLRVCND 785
Query: 740 CHTAIKMISKLEEREIIIRDNNRFHCFSEGICSCHDYW 764
CHTAIK ISKL REII+RD RFH F +G CSC DYW
Sbjct: 786 CHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
BLAST of Sed0008955 vs. ExPASy TrEMBL
Match:
A0A6J1FMC6 (pentatricopeptide repeat-containing protein At1g14470 OS=Cucurbita moschata OX=3662 GN=LOC111446708 PE=3 SV=1)
HSP 1 Score: 1342.4 bits (3473), Expect = 0.0e+00
Identity = 660/763 (86.50%), Postives = 711/763 (93.18%), Query Frame = 0
Query: 1 MFELVALAPKISSISQMRQLHARLLLNSLHSQNHWVSVLLRMCARFRARPAYAASIFTSS 60
M++LVA+A KIS+ISQ+RQLHA L+LNSL SQN+WVS+LL +C R A P+YAASIFTSS
Sbjct: 1 MYDLVAIATKISNISQLRQLHAHLVLNSLQSQNYWVSLLLTICTRLHAHPSYAASIFTSS 60
Query: 61 PSPDAAVYNCMIKYHFRMGVHDEVVSLFRCMQCLDLRPYSFVYIYLIKLAGKSGNLFHAY 120
P P+A+VY+CM+KY+ RMG HDEVVSLFRCMQCLDLRP+ VYIYLIKLAGKSGNLFHA
Sbjct: 61 PYPNASVYSCMLKYYSRMGAHDEVVSLFRCMQCLDLRPHPSVYIYLIKLAGKSGNLFHAS 120
Query: 121 VLKLGHMDDDFIRNAILDMYAKYGPVDLAWKLFEKMADRTLADWNSMISGCWKSGNEADA 180
VLKLGH+DD FIRNA+LDMYAKYG VDLA KLFE+M +RTLADWNSMISGCW SGNEADA
Sbjct: 121 VLKLGHIDDHFIRNAVLDMYAKYGQVDLARKLFEQMPNRTLADWNSMISGCWNSGNEADA 180
Query: 181 VMMFNKMPVRNIITWTAMVTGYAKMGNLAIARRYFDEMPERSVVSWNAMLSAYAQNECAE 240
VM+FN MP RN I+WTAMVTGYAK +L ARRYFDEMPE+SVVSWNAMLSAYAQNECAE
Sbjct: 181 VMLFNMMPDRNTISWTAMVTGYAKRRDLESARRYFDEMPEKSVVSWNAMLSAYAQNECAE 240
Query: 241 EALKLFYQMLREGFTPDDTTWVAAISSCTSIGNPSIADAILTKISQKNIILNNFVRTALL 300
EALKLF++ML+EG TPDDTTWVAAISSC+SIGNP++AD++L KI+QK++ILNN+V+TALL
Sbjct: 241 EALKLFHRMLKEGITPDDTTWVAAISSCSSIGNPNLADSLLAKINQKHVILNNYVKTALL 300
Query: 301 DMHAKFGNLEIAREIFDELGGHRNGNAVTWNIMISAYTKAGKLSSAREMFDNMPKRDVFS 360
DMHAKFGNLEIAR IFDELGG R NAVTWN+MISAYT+AGKLS ARE+FDNMPKRDV S
Sbjct: 301 DMHAKFGNLEIARRIFDELGGQR--NAVTWNVMISAYTRAGKLSLARELFDNMPKRDVVS 360
Query: 361 WNSMIAGYAQNGESAMSIELFKEMIASTDIQPDEVTVASVLSACGHIGALKLSYWVLNIV 420
WNSMIAGYAQNGESAMSI LF+EMI TDIQPDEVT+ASVLSACGHIGALK SYWVLNIV
Sbjct: 361 WNSMIAGYAQNGESAMSIHLFREMIDCTDIQPDEVTIASVLSACGHIGALKFSYWVLNIV 420
Query: 421 QEKNIKLGISGLNSLIFMYSKCGSVVVAQRIFQNMGTRDVVTFNTLISGFAANGHGKEAI 480
QEKNIK GISG NSLIFMYSKCG+VV A RIFQNMGT+DVVTFNTLISGFAANGHGK+AI
Sbjct: 421 QEKNIKFGISGFNSLIFMYSKCGNVVDAHRIFQNMGTKDVVTFNTLISGFAANGHGKDAI 480
Query: 481 KLALTMEEEGIEPDHVTYIGVLTACSHAGLLKEGKNIFKSIKAPTVDHYACMVDLLGRAG 540
KL LTMEEEGIEPDHVTYIGVLTACSHAG+LKEGKNIFKSIKAPTVDHYACMVDLLGRAG
Sbjct: 481 KLLLTMEEEGIEPDHVTYIGVLTACSHAGMLKEGKNIFKSIKAPTVDHYACMVDLLGRAG 540
Query: 541 ELDEAKILIESMPMKPHAGVYGSLLNASRIHKRVELGELAAGKLLELEPQNPGNYVLLSN 600
ELDEAKILIESMPMKPHAGVYGSLLN SRIHKRVELGELAA KLLELEPQNPGNY+LLSN
Sbjct: 541 ELDEAKILIESMPMKPHAGVYGSLLNGSRIHKRVELGELAANKLLELEPQNPGNYILLSN 600
Query: 601 IYASAGRWEDVRKVREKMMKGGVKKSVGMSWVEYMGQIHKFSVGDRSHERSKDIYRLLAE 660
IYASAGRWEDVR+VREKM KGGVKKSVGMSWVEY GQIH F+VGDRSHE SKDIYRLLAE
Sbjct: 601 IYASAGRWEDVRQVREKMRKGGVKKSVGMSWVEYKGQIHNFTVGDRSHEWSKDIYRLLAE 660
Query: 661 LERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTWTPIRVVKNL 720
LERKMKRVGFV DKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVG TPIRVVKNL
Sbjct: 661 LERKMKRVGFVTDKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVG--TPIRVVKNL 720
Query: 721 RICLDCHTAIKMISKLEEREIIIRDNNRFHCFSEGICSCHDYW 764
RIC+DCHTAIKMISKLEEREII+RDNNRFHCFSEGICSCHDYW
Sbjct: 721 RICMDCHTAIKMISKLEEREIIVRDNNRFHCFSEGICSCHDYW 759
BLAST of Sed0008955 vs. ExPASy TrEMBL
Match:
A0A6J1IYP6 (pentatricopeptide repeat-containing protein At1g14470 OS=Cucurbita maxima OX=3661 GN=LOC111481104 PE=3 SV=1)
HSP 1 Score: 1337.8 bits (3461), Expect = 0.0e+00
Identity = 661/763 (86.63%), Postives = 710/763 (93.05%), Query Frame = 0
Query: 1 MFELVALAPKISSISQMRQLHARLLLNSLHSQNHWVSVLLRMCARFRARPAYAASIFTSS 60
M++LVA+A KIS+ISQ+RQLHA L+LNSL SQN+WVS+LL +C R A PAYAASIFTSS
Sbjct: 1 MYDLVAIATKISNISQLRQLHAHLVLNSLQSQNYWVSLLLTICTRLHAHPAYAASIFTSS 60
Query: 61 PSPDAAVYNCMIKYHFRMGVHDEVVSLFRCMQCLDLRPYSFVYIYLIKLAGKSGNLFHAY 120
P P+A+VY+CM+KY+ RMG HDEVVSLFRCMQCLDLRP+ VYIYLIKLAGKSGNLFHA
Sbjct: 61 PYPNASVYSCMLKYYSRMGAHDEVVSLFRCMQCLDLRPHPSVYIYLIKLAGKSGNLFHAS 120
Query: 121 VLKLGHMDDDFIRNAILDMYAKYGPVDLAWKLFEKMADRTLADWNSMISGCWKSGNEADA 180
VLKLGH+DD FIRN ILDMYAKYG VDLA KLFE+M +RTLADWNSMISGCW SGNEADA
Sbjct: 121 VLKLGHIDDHFIRNTILDMYAKYGQVDLARKLFEQMPNRTLADWNSMISGCWNSGNEADA 180
Query: 181 VMMFNKMPVRNIITWTAMVTGYAKMGNLAIARRYFDEMPERSVVSWNAMLSAYAQNECAE 240
VM+F+ MP RN I+WTAMVTGYAKM +L ARRYFDEMPE+SVVSWNAMLSAYAQNECAE
Sbjct: 181 VMLFSMMPDRNTISWTAMVTGYAKMRDLETARRYFDEMPEKSVVSWNAMLSAYAQNECAE 240
Query: 241 EALKLFYQMLREGFTPDDTTWVAAISSCTSIGNPSIADAILTKISQKNIILNNFVRTALL 300
EALKLF++ML+EG TPDDTTWVAAISSC+SIGN S+AD++L KI+QK++ILNNFV+TALL
Sbjct: 241 EALKLFHRMLKEGITPDDTTWVAAISSCSSIGNLSLADSLLAKINQKHVILNNFVKTALL 300
Query: 301 DMHAKFGNLEIAREIFDELGGHRNGNAVTWNIMISAYTKAGKLSSAREMFDNMPKRDVFS 360
DMHAKFGNLEIAR IFDELGG R NAVTWN+MISAYT+AGKLS ARE+FDNMPKRDV S
Sbjct: 301 DMHAKFGNLEIARGIFDELGGQR--NAVTWNVMISAYTRAGKLSLARELFDNMPKRDVVS 360
Query: 361 WNSMIAGYAQNGESAMSIELFKEMIASTDIQPDEVTVASVLSACGHIGALKLSYWVLNIV 420
WNSMIAGYAQNGESAMSI LF+EMI TDIQPDEVT+ASVLSACGHIGALK S WVLNIV
Sbjct: 361 WNSMIAGYAQNGESAMSIHLFREMIDCTDIQPDEVTIASVLSACGHIGALKFSCWVLNIV 420
Query: 421 QEKNIKLGISGLNSLIFMYSKCGSVVVAQRIFQNMGTRDVVTFNTLISGFAANGHGKEAI 480
QEKNIK GISG NSLIFMYSKCG+VV A RIFQNMGT+DVVTFNTLISGFAANGHGK+AI
Sbjct: 421 QEKNIKFGISGFNSLIFMYSKCGNVVDAHRIFQNMGTKDVVTFNTLISGFAANGHGKDAI 480
Query: 481 KLALTMEEEGIEPDHVTYIGVLTACSHAGLLKEGKNIFKSIKAPTVDHYACMVDLLGRAG 540
KL LTMEEEGIEPDHVTYIGVLTACSHAG+LKEGKNIFKSIKAPTVDHYACMVDLLGRAG
Sbjct: 481 KLLLTMEEEGIEPDHVTYIGVLTACSHAGMLKEGKNIFKSIKAPTVDHYACMVDLLGRAG 540
Query: 541 ELDEAKILIESMPMKPHAGVYGSLLNASRIHKRVELGELAAGKLLELEPQNPGNYVLLSN 600
ELD+AKILIESMPMKPHAGVYGSLLNASRIHKRVELGELAA KLLELEPQNPGNY+LLSN
Sbjct: 541 ELDDAKILIESMPMKPHAGVYGSLLNASRIHKRVELGELAANKLLELEPQNPGNYILLSN 600
Query: 601 IYASAGRWEDVRKVREKMMKGGVKKSVGMSWVEYMGQIHKFSVGDRSHERSKDIYRLLAE 660
IYASAGRWEDVR+VREKM KGGVKKSVGMSWVEY GQIH F+VGDRSHE SKDIYRLLAE
Sbjct: 601 IYASAGRWEDVRQVREKMRKGGVKKSVGMSWVEYKGQIHNFTVGDRSHEWSKDIYRLLAE 660
Query: 661 LERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTWTPIRVVKNL 720
LERKMKRVGFV DKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVG TPIRVVKNL
Sbjct: 661 LERKMKRVGFVTDKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVG--TPIRVVKNL 720
Query: 721 RICLDCHTAIKMISKLEEREIIIRDNNRFHCFSEGICSCHDYW 764
RIC+DCHTAIKMISKLEEREII+RDNNRFHCFSEGICSCHDYW
Sbjct: 721 RICMDCHTAIKMISKLEEREIIVRDNNRFHCFSEGICSCHDYW 759
BLAST of Sed0008955 vs. ExPASy TrEMBL
Match:
A0A6J1BWI0 (pentatricopeptide repeat-containing protein At1g14470-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005962 PE=3 SV=1)
HSP 1 Score: 1321.2 bits (3418), Expect = 0.0e+00
Identity = 655/763 (85.85%), Postives = 701/763 (91.87%), Query Frame = 0
Query: 1 MFELVALAPKISSISQMRQLHARLLLNSLHSQNHWVSVLLRMCARFRARPAYAASIFTSS 60
M +L A+ KIS ISQ+RQLHA L+LNSLHS N+WVS+L+ +C +A PAYAASIFTSS
Sbjct: 1 MSKLGAIVTKISYISQLRQLHAHLVLNSLHSHNYWVSLLITLCTHLQAHPAYAASIFTSS 60
Query: 61 PSPDAAVYNCMIKYHFRMGVHDEVVSLFRCMQCLDLRPYSFVYIYLIKLAGKSGNLFHAY 120
SP +VY+CM+KY+ RMG H+EVVS+FRCMQCLDLRP+ FVYIYLIKLAGKSGNLFHAY
Sbjct: 61 TSPSVSVYSCMLKYYSRMGAHNEVVSIFRCMQCLDLRPHPFVYIYLIKLAGKSGNLFHAY 120
Query: 121 VLKLGHMDDDFIRNAILDMYAKYGPVDLAWKLFEKMADRTLADWNSMISGCWKSGNEADA 180
VLKLGH+DD F+RNAILDMYAKYG VDLA KLFE+MADRTLADWNSMISG WKSG EADA
Sbjct: 121 VLKLGHIDDHFVRNAILDMYAKYGQVDLARKLFEQMADRTLADWNSMISGYWKSGKEADA 180
Query: 181 VMMFNKMPVRNIITWTAMVTGYAKMGNLAIARRYFDEMPERSVVSWNAMLSAYAQNECAE 240
VM+FN MP RNIITWTAMVTGYAKM +L ARRYFD+MPERSVVSWNAMLSAYAQNECAE
Sbjct: 181 VMLFNMMPARNIITWTAMVTGYAKMKDLESARRYFDQMPERSVVSWNAMLSAYAQNECAE 240
Query: 241 EALKLFYQMLREGFTPDDTTWVAAISSCTSIGNPSIADAILTKISQKNIILNNFVRTALL 300
EALKLF QML+EG PDDTTWVAAISSC+S+GNPS+AD I+ KI+QK+IILNNFV+TALL
Sbjct: 241 EALKLFQQMLKEGIAPDDTTWVAAISSCSSVGNPSLADYIIRKINQKHIILNNFVKTALL 300
Query: 301 DMHAKFGNLEIAREIFDELGGHRNGNAVTWNIMISAYTKAGKLSSAREMFDNMPKRDVFS 360
DMHAKFGNLEIAREIFDELGG R NAVTWNIMISAYT++GKL ARE+FDNMPKRDV S
Sbjct: 301 DMHAKFGNLEIAREIFDELGGQR--NAVTWNIMISAYTRSGKLLLARELFDNMPKRDVVS 360
Query: 361 WNSMIAGYAQNGESAMSIELFKEMIASTDIQPDEVTVASVLSACGHIGALKLSYWVLNIV 420
WNSMIAGYAQNGESAMSIELFKEMI TDIQPDEVT+ASVLSACGHIGA KLSY V+NIV
Sbjct: 361 WNSMIAGYAQNGESAMSIELFKEMITCTDIQPDEVTIASVLSACGHIGASKLSYLVVNIV 420
Query: 421 QEKNIKLGISGLNSLIFMYSKCGSVVVAQRIFQNMGTRDVVTFNTLISGFAANGHGKEAI 480
QEKNIKLGIS NSLIFMYSKCG++ A RIFQNMGTRDVVTFNTLISGFAANG GKEAI
Sbjct: 421 QEKNIKLGISAFNSLIFMYSKCGNMAHAHRIFQNMGTRDVVTFNTLISGFAANGRGKEAI 480
Query: 481 KLALTMEEEGIEPDHVTYIGVLTACSHAGLLKEGKNIFKSIKAPTVDHYACMVDLLGRAG 540
+L L MEEEGIEPDHVTYIGVLTACSHAGLLKEGKNIFKSIKAPTVDHYACMVDLLGRAG
Sbjct: 481 ELVLKMEEEGIEPDHVTYIGVLTACSHAGLLKEGKNIFKSIKAPTVDHYACMVDLLGRAG 540
Query: 541 ELDEAKILIESMPMKPHAGVYGSLLNASRIHKRVELGELAAGKLLELEPQNPGNYVLLSN 600
ELDEAKILI+SMPMKPHAGVYGSLLNASRIHKRVELGELAA KL ELEPQNPGNYVLLSN
Sbjct: 541 ELDEAKILIQSMPMKPHAGVYGSLLNASRIHKRVELGELAANKLFELEPQNPGNYVLLSN 600
Query: 601 IYASAGRWEDVRKVREKMMKGGVKKSVGMSWVEYMGQIHKFSVGDRSHERSKDIYRLLAE 660
IYASAGRWEDV+ VREKM K GVKKSVGMSWVEY GQ+HKF VGDRSHE S+DIYRLLAE
Sbjct: 601 IYASAGRWEDVKMVREKMKKVGVKKSVGMSWVEYKGQVHKFIVGDRSHEWSRDIYRLLAE 660
Query: 661 LERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTWTPIRVVKNL 720
LERKMKRVGFVADKSCALRDVEEEEKEEM+GTHSEKLAICFALLVSEVG TPIRVVKNL
Sbjct: 661 LERKMKRVGFVADKSCALRDVEEEEKEEMVGTHSEKLAICFALLVSEVG--TPIRVVKNL 720
Query: 721 RICLDCHTAIKMISKLEEREIIIRDNNRFHCFSEGICSCHDYW 764
RICLDCHTAIKM+SKLEER I++RDNNRFHCFSEGICSCHDYW
Sbjct: 721 RICLDCHTAIKMVSKLEERVIVVRDNNRFHCFSEGICSCHDYW 759
BLAST of Sed0008955 vs. ExPASy TrEMBL
Match:
A0A1S3BZ59 (pentatricopeptide repeat-containing protein At1g14470 OS=Cucumis melo OX=3656 GN=LOC103495023 PE=3 SV=1)
HSP 1 Score: 1275.8 bits (3300), Expect = 0.0e+00
Identity = 625/763 (81.91%), Postives = 687/763 (90.04%), Query Frame = 0
Query: 1 MFELVALAPKISSISQMRQLHARLLLNSLHSQNHWVSVLLRMCARFRARPAYAASIFTSS 60
M+ELVALA KIS+I Q+R H L+ NSLHS N+WVS+LL +C R A PAY SIFTSS
Sbjct: 1 MYELVALASKISNIRQLRLFHGHLVHNSLHSHNYWVSLLLVICNRLHAHPAYVDSIFTSS 60
Query: 61 PSPDAAVYNCMIKYHFRMGVHDEVVSLFRCMQCLDLRPYSFVYIYLIKLAGKSGNLFHAY 120
PSPDA+VY+CM+KY+ RMG H++VVSLF+CM LDLRP FVYIYLIK AGKSGNLFHAY
Sbjct: 61 PSPDASVYSCMLKYYSRMGAHNQVVSLFKCMHSLDLRPQPFVYIYLIKSAGKSGNLFHAY 120
Query: 121 VLKLGHMDDDFIRNAILDMYAKYGPVDLAWKLFEKMADRTLADWNSMISGCWKSGNEADA 180
VLKLGH+DD FIRNAILDMY K G VDLA KLFE+MA++TL DWNSMISGCWKSGNE +A
Sbjct: 121 VLKLGHIDDRFIRNAILDMYVKNGQVDLARKLFEQMAEKTLVDWNSMISGCWKSGNETEA 180
Query: 181 VMMFNKMPVRNIITWTAMVTGYAKMGNLAIARRYFDEMPERSVVSWNAMLSAYAQNECAE 240
VM+FN MP RNIITWT+MVTGYAK+G+L ARRYFDEMPERSVVSWNAM SAYAQ EC +
Sbjct: 181 VMLFNMMPARNIITWTSMVTGYAKVGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPK 240
Query: 241 EALKLFYQMLREGFTPDDTTWVAAISSCTSIGNPSIADAILTKISQKNIILNNFVRTALL 300
EALKLF+QML+EG TPDDTTW ISSC+SIG+P++AD+IL I+QK+I+LN+FV+TALL
Sbjct: 241 EALKLFHQMLKEGITPDDTTWAVTISSCSSIGDPTLADSILRMINQKHIVLNSFVQTALL 300
Query: 301 DMHAKFGNLEIAREIFDELGGHRNGNAVTWNIMISAYTKAGKLSSAREMFDNMPKRDVFS 360
DMHAKFGNLEIAR IFDELG RN V WN+MISAYT+ GKLS ARE+FDNMPKRDV S
Sbjct: 301 DMHAKFGNLEIARNIFDELGSQRND--VAWNVMISAYTRVGKLSLARELFDNMPKRDVVS 360
Query: 361 WNSMIAGYAQNGESAMSIELFKEMIASTDIQPDEVTVASVLSACGHIGALKLSYWVLNIV 420
WNSMIAGYAQNGE+AMSIELFKEMI+ DIQPDEVT+ASVLSACGHIGALKL YWVL+IV
Sbjct: 361 WNSMIAGYAQNGEAAMSIELFKEMISCADIQPDEVTIASVLSACGHIGALKLGYWVLDIV 420
Query: 421 QEKNIKLGISGLNSLIFMYSKCGSVVVAQRIFQNMGTRDVVTFNTLISGFAANGHGKEAI 480
+EKNIKLGISG NSLIFMYSKCGSV A RIFQ M TRDVV+FNTLISGFAANGHGKEAI
Sbjct: 421 REKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMETRDVVSFNTLISGFAANGHGKEAI 480
Query: 481 KLALTMEEEGIEPDHVTYIGVLTACSHAGLLKEGKNIFKSIKAPTVDHYACMVDLLGRAG 540
KL LTMEEEGIEPDHVTYIGVLTACSHAGLL EGKN+FKSIKAPTVDHYACMVDLLGRAG
Sbjct: 481 KLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIKAPTVDHYACMVDLLGRAG 540
Query: 541 ELDEAKILIESMPMKPHAGVYGSLLNASRIHKRVELGELAAGKLLELEPQNPGNYVLLSN 600
ELDEAK+LI+SMPMKPH GVYGSLLNASRIHKRV LGELAA KL ELEPQNPGNYVLLSN
Sbjct: 541 ELDEAKMLIQSMPMKPHGGVYGSLLNASRIHKRVGLGELAASKLFELEPQNPGNYVLLSN 600
Query: 601 IYASAGRWEDVRKVREKMMKGGVKKSVGMSWVEYMGQIHKFSVGDRSHERSKDIYRLLAE 660
IYAS+GRWEDV++VRE M K G++K VGMSWVEY GQ+HKF VGDRSHE+SKDIY+LLAE
Sbjct: 601 IYASSGRWEDVKRVREMMRKRGLQKLVGMSWVEYKGQVHKFIVGDRSHEQSKDIYKLLAE 660
Query: 661 LERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTWTPIRVVKNL 720
LERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALL+SEVG TPIRVVKNL
Sbjct: 661 LERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVG--TPIRVVKNL 720
Query: 721 RICLDCHTAIKMISKLEEREIIIRDNNRFHCFSEGICSCHDYW 764
RICLDCHTAIKMISKLE REI++RDNNRFHCFS+G+CSC+DYW
Sbjct: 721 RICLDCHTAIKMISKLEGREIVVRDNNRFHCFSDGMCSCYDYW 759
BLAST of Sed0008955 vs. ExPASy TrEMBL
Match:
A0A5D3DV14 (Transmembrane protein 147 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1920G00350 PE=3 SV=1)
HSP 1 Score: 1241.1 bits (3210), Expect = 0.0e+00
Identity = 613/748 (81.95%), Postives = 672/748 (89.84%), Query Frame = 0
Query: 1 MFELVALAPKISSISQMRQLHARLLLNSLHSQNHWVSVLLRMCARFRARPAYAASIFTSS 60
M+ELVALA KIS+I Q+R H L+ NSLHS N+WVS+LL +C R A PAY SIFTSS
Sbjct: 1 MYELVALASKISNIRQLRLFHGHLVHNSLHSHNYWVSLLLVICNRLHAHPAYVDSIFTSS 60
Query: 61 PSPDAAVYNCMIKYHFRMGVHDEVVSLFRCMQCLDLRPYSFVYIYLIKLAGKSGNLFHAY 120
PSPDA+VY+CM+KY+ RMG H++VVSLF+CM LDLRP FVYIYLIK AGKSGNLFHAY
Sbjct: 61 PSPDASVYSCMLKYYSRMGAHNQVVSLFKCMHSLDLRPQPFVYIYLIKSAGKSGNLFHAY 120
Query: 121 VLKLGHMDDDFIRNAILDMYAKYGPVDLAWKLFEKMADRTLADWNSMISGCWKSGNEADA 180
VLKLGH+DD FIRNAILDMY K G VDLA KLFE+MA++TL DWNSMISGCWKSGNE +A
Sbjct: 121 VLKLGHIDDRFIRNAILDMYVKNGQVDLARKLFEQMAEKTLVDWNSMISGCWKSGNETEA 180
Query: 181 VMMFNKMPVRNIITWTAMVTGYAKMGNLAIARRYFDEMPERSVVSWNAMLSAYAQNECAE 240
VM+FN MP RNIITWT+MVTGYAK+G+L ARRYFDEMPERSVVSWNAM SAYAQ EC +
Sbjct: 181 VMLFNMMPARNIITWTSMVTGYAKVGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPK 240
Query: 241 EALKLFYQMLREGFTPDDTTWVAAISSCTSIGNPSIADAILTKISQKNIILNNFVRTALL 300
EALKLF+QML+EG TPDDTTW ISSC+SIG+P++AD+IL I+QK+I+LN+FV+TALL
Sbjct: 241 EALKLFHQMLKEGITPDDTTWAVTISSCSSIGDPTLADSILRMINQKHIVLNSFVQTALL 300
Query: 301 DMHAKFGNLEIAREIFDELGGHRNGNAVTWNIMISAYTKAGKLSSAREMFDNMPKRDVFS 360
DMHAKFGNLEIAR IFDELG RN V WN+MISAYT+ GKLS ARE+FDNMPKRDV S
Sbjct: 301 DMHAKFGNLEIARNIFDELGSQRND--VAWNVMISAYTRVGKLSLARELFDNMPKRDVVS 360
Query: 361 WNSMIAGYAQNGESAMSIELFKEMIASTDIQPDEVTVASVLSACGHIGALKLSYWVLNIV 420
WNSMIAGYAQNGE+AMSIELFKEMI+ DIQPDEVT+ASVLSACGHIGALKL YWVL+IV
Sbjct: 361 WNSMIAGYAQNGEAAMSIELFKEMISCADIQPDEVTIASVLSACGHIGALKLGYWVLDIV 420
Query: 421 QEKNIKLGISGLNSLIFMYSKCGSVVVAQRIFQNMGTRDVVTFNTLISGFAANGHGKEAI 480
+EKNIKLGISG NSLIFMYSKCGSV A RIFQ M TRDVV+FNTLISGFAANGHGKEAI
Sbjct: 421 REKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMETRDVVSFNTLISGFAANGHGKEAI 480
Query: 481 KLALTMEEEGIEPDHVTYIGVLTACSHAGLLKEGKNIFKSIKAPTVDHYACMVDLLGRAG 540
KL LTMEEEGIEPDHVTYIGVLTACSHAGLL EGKN+FKSIKAPTVDHYACMVDLLGRAG
Sbjct: 481 KLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIKAPTVDHYACMVDLLGRAG 540
Query: 541 ELDEAKILIESMPMKPHAGVYGSLLNASRIHKRVELGELAAGKLLELEPQNPGNYVLLSN 600
ELDEAK+LI+SMPMKPH GVYGSLLNASRIHKRV LGELAA KL ELEPQNPGNYVLLSN
Sbjct: 541 ELDEAKMLIQSMPMKPHGGVYGSLLNASRIHKRVGLGELAASKLFELEPQNPGNYVLLSN 600
Query: 601 IYASAGRWEDVRKVREKMMKGGVKKSVGMSWVEYMGQIHKFSVGDRSHERSKDIYRLLAE 660
IYAS+GRWEDV++VRE M K G++K VGMSWVEY GQ+HKF VGDRSHE+SKDIY+LLAE
Sbjct: 601 IYASSGRWEDVKRVREMMRKRGLQKLVGMSWVEYKGQVHKFIVGDRSHEQSKDIYKLLAE 660
Query: 661 LERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTWTPIRVVKNL 720
LERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALL+SEVG TPIRVVKNL
Sbjct: 661 LERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVG--TPIRVVKNL 720
Query: 721 RICLDCHTAIKMISKLEEREIIIRDNNR 749
RICLDCHTAIKMISKLE REI++RDNNR
Sbjct: 721 RICLDCHTAIKMISKLEGREIVVRDNNR 744
BLAST of Sed0008955 vs. TAIR 10
Match:
AT1G14470.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 529.6 bits (1363), Expect = 4.0e-150
Identity = 268/534 (50.19%), Postives = 372/534 (69.66%), Query Frame = 0
Query: 4 LVALAPKISSISQMRQLHARLLL-NSLHSQNHWVSVLLRMCARFRARPAYAASIFTSSPS 63
L A+A + + Q+ Q+HA+L++ NSL Q++W S ++ C R RA Y IF S
Sbjct: 9 LAAIASQALTFPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTF 68
Query: 64 PDAAVYNCMIKYHFRMGVHDEVVSLFRCMQCLDLRPYSFVYIYLIKLAGKSGNLFHAYVL 123
P+ V N M KY +M + ++V+ L+ + P +F + +IK AG+ G LF A V
Sbjct: 69 PNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQALVE 128
Query: 124 KLGHMDDDFIRNAILDMYAKYGPVDLAWKLFEKMADRTLADWNSMISGCWKSGNEADAVM 183
KLG D ++RN I+DMY K+ V+ A K+F++++ R +DWN MISG WK GN+ +A
Sbjct: 129 KLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACK 188
Query: 184 MFNKMPVRNIITWTAMVTGYAKMGNLAIARRYFDEMPERSVVSWNAMLSAYAQNECAEEA 243
+F+ MP ++++WT M+TG+AK+ +L AR+YFD MPE+SVVSWNAMLS YAQN E+A
Sbjct: 189 LFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDA 248
Query: 244 LKLFYQMLREGFTPDDTTWVAAISSCTSIGNPSIADAILTKISQKNIILNNFVRTALLDM 303
L+LF MLR G P++TTWV IS+C+ +PS+ +++ I +K + LN FV+TALLDM
Sbjct: 249 LRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDM 308
Query: 304 HAKFGNLEIAREIFDELGGHRNGNAVTWNIMISAYTKAGKLSSAREMFDNMPKRDVFSWN 363
HAK +++ AR IF+ELG R N VTWN MIS YT+ G +SSAR++FD MPKR+V SWN
Sbjct: 309 HAKCRDIQSARRIFNELGTQR--NLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWN 368
Query: 364 SMIAGYAQNGESAMSIELFKEMIASTDIQPDEVTVASVLSACGHIGALKLSYWVLNIVQE 423
S+IAGYA NG++A++IE F++MI D +PDEVT+ SVLSACGH+ L+L +++ +++
Sbjct: 369 SLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRK 428
Query: 424 KNIKLGISGLNSLIFMYSKCGSVVVAQRIFQNMGTRDVVTFNTLISGFAANGHGKEAIKL 483
IKL SG SLIFMY++ G++ A+R+F M RDVV++NTL + FAANG G E + L
Sbjct: 429 NQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNL 488
Query: 484 ALTMEEEGIEPDHVTYIGVLTACSHAGLLKEGKNIFKSIKAPTVDHYACMVDLL 537
M++EGIEPD VTY VLTAC+ AGLLKEG+ IFKSI+ P DHYACM DLL
Sbjct: 489 LSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRNPLADHYACM-DLL 539
BLAST of Sed0008955 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 508.1 bits (1307), Expect = 1.3e-143
Identity = 277/777 (35.65%), Postives = 448/777 (57.66%), Query Frame = 0
Query: 5 VALAPKISSISQMRQLHARLLLNSLHSQNHWVSVLLRMC---ARFRARPAYAASIFTSSP 64
++L ++ +R +HA+++ LH+ N+ +S L+ C F P YA S+F +
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLP-YAISVFKTIQ 96
Query: 65 SPDAAVYNCMIKYHFRMGVHDEVVSLFRCMQCLDLRPYSFVYIYLIKLAGKS-----GNL 124
P+ ++N M + H + L+ CM L L P S+ + +++K KS G
Sbjct: 97 EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 156
Query: 125 FHAYVLKLGHMDDDFIRNAILDMYAKYGPVDLAWKLFEKMADRTLADWNSMISGCWKSGN 184
H +VLKLG D ++ +++ MY + G ++
Sbjct: 157 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLE----------------------------- 216
Query: 185 EADAVMMFNKMPVRNIITWTAMVTGYAKMGNLAIARRYFDEMPERSVVSWNAMLSAYAQN 244
DA +F+K P R+++++TA++ GYA G + A++ FDE+P + VVSWNAM+S YA+
Sbjct: 217 --DAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAET 276
Query: 245 ECAEEALKLFYQMLREGFTPDDTTWVAAISSCTSIGNPSIADAILTKISQKNIILNNFVR 304
+EAL+LF M++ PD++T V +S+C
Sbjct: 277 GNYKEALELFKDMMKTNVRPDESTMVTVVSAC---------------------------- 336
Query: 305 TALLDMHAKFGNLEIAREIFDELGGHRNG-NAVTWNIMISAYTKAGKLSSAREMFDNMPK 364
A+ G++E+ R++ + H G N N +I Y+K G+L +A +F+ +P
Sbjct: 337 -------AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 396
Query: 365 RDVFSWNSMIAGYAQNGESAMSIELFKEMIASTDIQPDEVTVASVLSACGHIGALKLSYW 424
+DV SWN++I GY ++ LF+EM+ S + P++VT+ S+L AC H+GA+ + W
Sbjct: 397 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDIGRW 456
Query: 425 VLNIVQEKNIKLGISGLN----SLIFMYSKCGSVVVAQRIFQNMGTRDVVTFNTLISGFA 484
+ ++ +K +K G++ + SLI MY+KCG + A ++F ++ + + ++N +I GFA
Sbjct: 457 I-HVYIDKRLK-GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFA 516
Query: 485 ANGHGKEAIKLALTMEEEGIEPDHVTYIGVLTACSHAGLLKEGKNIFKSI-----KAPTV 544
+G + L M + GI+PD +T++G+L+ACSH+G+L G++IF+++ P +
Sbjct: 517 MHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKL 576
Query: 545 DHYACMVDLLGRAGELDEAKILIESMPMKPHAGVYGSLLNASRIHKRVELGELAAGKLLE 604
+HY CM+DLLG +G EA+ +I M M+P ++ SLL A ++H VELGE A L++
Sbjct: 577 EHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIK 636
Query: 605 LEPQNPGNYVLLSNIYASAGRWEDVRKVREKMMKGGVKKSVGMSWVEYMGQIHKFSVGDR 664
+EP+NPG+YVLLSNIYASAGRW +V K R + G+KK G S +E +H+F +GD+
Sbjct: 637 IEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDK 696
Query: 665 SHERSKDIYRLLAELERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVS 724
H R+++IY +L E+E +++ GFV D S L+++EEE KE L HSEKLAI F L+ +
Sbjct: 697 FHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLIST 741
Query: 725 EVGTWTPIRVVKNLRICLDCHTAIKMISKLEEREIIIRDNNRFHCFSEGICSCHDYW 764
+ G T + +VKNLR+C +CH A K+ISK+ +REII RD RFH F +G+CSC+DYW
Sbjct: 757 KPG--TKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
BLAST of Sed0008955 vs. TAIR 10
Match:
AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 506.5 bits (1303), Expect = 3.7e-143
Identity = 278/717 (38.77%), Postives = 422/717 (58.86%), Query Frame = 0
Query: 53 AASIFTSSPSPDAAVYNCMIKYHFRMGVHDEVVSLFRCMQCLDLRPYSFVYIYLIKLAGK 112
A +F P + YN MI + R G + LF M DL ++ +IK +
Sbjct: 83 ALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWN----VMIKGYVR 142
Query: 113 SGNLFHAYVL-KLGHMDDDFIRNAILDMYAKYGPVDLAWKLFEKMADRTLADWNSMISGC 172
+ NL A L ++ D N +L YA+ G VD A +F++M ++ WN+++S
Sbjct: 143 NRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAY 202
Query: 173 WKSGNEADAVMMFNKMPVRNIITWTAMVTGYAKMGNLAIARRYFDEMPERSVVSWNAMLS 232
++ +A M+F +++W ++ G+ K + AR++FD M R VVSWN +++
Sbjct: 203 VQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIIT 262
Query: 233 AYAQNECAEEALKLFYQMLREGFTPDDTTWVAAISSCTSIGNPSIADAILTKISQKNIIL 292
YAQ+ +EA +LF E D TW A +S A + K+ ++N +
Sbjct: 263 GYAQSGKIDEARQLF----DESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVS 322
Query: 293 NNFVRTALLDMHAKFGNLEIAREIFDELGGHRNGNAVTWNIMISAYTKAGKLSSAREMFD 352
N A+L + + +E+A+E+FD + N TWN MI+ Y + GK+S A+ +FD
Sbjct: 323 WN----AMLAGYVQGERMEMAKELFDVMPCR---NVSTWNTMITGYAQCGKISEAKNLFD 382
Query: 353 NMPKRDVFSWNSMIAGYAQNGESAMSIELFKEMIASTDIQPDEVTVASVLSACGHIGALK 412
MPKRD SW +MIAGY+Q+G S ++ LF +M + + + +S LS C + AL+
Sbjct: 383 KMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGG-RLNRSSFSSALSTCADVVALE 442
Query: 413 LSYWVLNIVQEKNIKLGISGLNSLIFMYSKCGSVVVAQRIFQNMGTRDVVTFNTLISGFA 472
L + + + + G N+L+ MY KCGS+ A +F+ M +D+V++NT+I+G++
Sbjct: 443 LGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYS 502
Query: 473 ANGHGKEAIKLALTMEEEGIEPDHVTYIGVLTACSHAGLLKEGKNIFKSIK-----APTV 532
+G G+ A++ +M+ EG++PD T + VL+ACSH GL+ +G+ F ++ P
Sbjct: 503 RHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNS 562
Query: 533 DHYACMVDLLGRAGELDEAKILIESMPMKPHAGVYGSLLNASRIHKRVELGELAAGKLLE 592
HYACMVDLLGRAG L++A L+++MP +P A ++G+LL ASR+H EL E AA K+
Sbjct: 563 QHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFA 622
Query: 593 LEPQNPGNYVLLSNIYASAGRWEDVRKVREKMMKGGVKKSVGMSWVEYMGQIHKFSVGDR 652
+EP+N G YVLLSN+YAS+GRW DV K+R +M GVKK G SW+E + H FSVGD
Sbjct: 623 MEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDE 682
Query: 653 SHERSKDIYRLLAELERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVS 712
H +I+ L EL+ +MK+ G+V+ S L DVEEEEKE M+ HSE+LA+ + ++
Sbjct: 683 FHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIM-- 742
Query: 713 EVGTWTPIRVVKNLRICLDCHTAIKMISKLEEREIIIRDNNRFHCFSEGICSCHDYW 764
V + PIRV+KNLR+C DCH AIK ++++ R II+RDNNRFH F +G CSC DYW
Sbjct: 743 RVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
BLAST of Sed0008955 vs. TAIR 10
Match:
AT3G22690.2 (INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). )
HSP 1 Score: 490.3 bits (1261), Expect = 2.7e-138
Identity = 289/813 (35.55%), Postives = 444/813 (54.61%), Query Frame = 0
Query: 13 SISQMRQLHARLLLNSLHSQNHWVSVLLRMCAR-----FRARPAYAASIFTSSPSPDAA- 72
+I +++ H L L + VS + ++ AR R ++A +F +S S
Sbjct: 44 TIDELKMFHRSLTKQGLDND---VSTITKLVARSCELGTRESLSFAKEVFENSESYGTCF 103
Query: 73 VYNCMIKYHFRMGVHDEVVSLFRCMQCLDLRPYSFVYIYLIKLAGKS-----GNLFHAYV 132
+YN +I+ + G+ +E + LF M + P + + + + KS G H +
Sbjct: 104 MYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 163
Query: 133 LKLGHMDDDFIRNAILDMYAKYGPVDLAWKLFEKMADRTLADWNSMISGCWKSGNEADAV 192
+K+G+ D F++N+++ YA+ G +D A K+F++M++R + W SMI G + DAV
Sbjct: 164 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 223
Query: 193 MMFNKMPVR-----------------------------------------NIITWTAMVT 252
+F +M VR N + +A+V
Sbjct: 224 DLFFRM-VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVD 283
Query: 253 GYAKMGNLAIARRYFDEMPERSVVSWNAMLSAYAQNECAEEALKLFYQMLREGFTPDDTT 312
Y K + +A+R FDE ++ NAM S Y + EAL +F M+ G PD +
Sbjct: 284 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 343
Query: 313 WVAAISSCTSIGNPSIADAILTKISQKNIILNNF-----VRTALLDMHAKFGNLEIAREI 372
++AISSC+ + N + K ++ N F + AL+DM+ K + A I
Sbjct: 344 MLSAISSCSQLRN-----ILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRI 403
Query: 373 FDELGGHRNGNAVTWNIMISAYTKAGKLSSAREMFDNMPKRDVFSWNSMIAGYAQNGESA 432
FD + N VTWN +++ Y + G++ +A E F+ MP++++ SWN++I+G Q
Sbjct: 404 FDRMS---NKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 463
Query: 433 MSIELFKEMIASTDIQPDEVTVASVLSACGHIGALKLSYWVLNIVQEKNIKLGISGLNSL 492
+IE+F M + + D VT+ S+ SACGH+GAL L+ W+ +++ I+L + +L
Sbjct: 464 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 523
Query: 493 IFMYSKCGSVVVAQRIFQNMGTRDVVTFNTLISGFAANGHGKEAIKLALTMEEEGIEPDH 552
+ M+S+CG A IF ++ RDV + I A G+ + AI+L M E+G++PD
Sbjct: 524 VDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDG 583
Query: 553 VTYIGVLTACSHAGLLKEGKNIFKSI-----KAPTVDHYACMVDLLGRAGELDEAKILIE 612
V ++G LTACSH GL+++GK IF S+ +P HY CMVDLLGRAG L+EA LIE
Sbjct: 584 VAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE 643
Query: 613 SMPMKPHAGVYGSLLNASRIHKRVELGELAAGKLLELEPQNPGNYVLLSNIYASAGRWED 672
MPM+P+ ++ SLL A R+ VE+ AA K+ L P+ G+YVLLSN+YASAGRW D
Sbjct: 644 DMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWND 703
Query: 673 VRKVREKMMKGGVKKSVGMSWVEYMGQIHKFSVGDRSHERSKDIYRLLAELERKMKRVGF 732
+ KVR M + G++K G S ++ G+ H+F+ GD SH +I +L E+ ++ +G
Sbjct: 704 MAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGH 763
Query: 733 VADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTWTPIRVVKNLRICLDCHTAI 764
V D S L DV+E+EK ML HSEKLA+ + L+ S G T IR+VKNLR+C DCH+
Sbjct: 764 VPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKG--TTIRIVKNLRVCSDCHSFA 823
BLAST of Sed0008955 vs. TAIR 10
Match:
AT3G22690.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). )
HSP 1 Score: 486.1 bits (1250), Expect = 5.1e-137
Identity = 288/812 (35.47%), Postives = 443/812 (54.56%), Query Frame = 0
Query: 13 SISQMRQLHARLLLNSLHSQNHWVSVLLRMCAR-----FRARPAYAASIFTSSPSPDAA- 72
+I +++ H L L + VS + ++ AR R ++A +F +S S
Sbjct: 44 TIDELKMFHRSLTKQGLDND---VSTITKLVARSCELGTRESLSFAKEVFENSESYGTCF 103
Query: 73 VYNCMIKYHFRMGVHDEVVSLFRCMQCLDLRPYSFVYIYLIKLAGKS-----GNLFHAYV 132
+YN +I+ + G+ +E + LF M + P + + + + KS G H +
Sbjct: 104 MYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 163
Query: 133 LKLGHMDDDFIRNAILDMYAKYGPVDLAWKLFEKMADRTLADWNSMISGCWKSGNEADAV 192
+K+G+ D F++N+++ YA+ G +D A K+F++M++R + W SMI G + DAV
Sbjct: 164 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 223
Query: 193 MMFNKMPVR-----------------------------------------NIITWTAMVT 252
+F +M VR N + +A+V
Sbjct: 224 DLFFRM-VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVD 283
Query: 253 GYAKMGNLAIARRYFDEMPERSVVSWNAMLSAYAQNECAEEALKLFYQMLREGFTPDDTT 312
Y K + +A+R FDE ++ NAM S Y + EAL +F M+ G PD +
Sbjct: 284 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 343
Query: 313 WVAAISSCTSIGNPSIADAILTKISQKNIILNNF-----VRTALLDMHAKFGNLEIAREI 372
++AISSC+ + N + K ++ N F + AL+DM+ K + A I
Sbjct: 344 MLSAISSCSQLRN-----ILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRI 403
Query: 373 FDELGGHRNGNAVTWNIMISAYTKAGKLSSAREMFDNMPKRDVFSWNSMIAGYAQNGESA 432
FD + N VTWN +++ Y + G++ +A E F+ MP++++ SWN++I+G Q
Sbjct: 404 FDRMS---NKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 463
Query: 433 MSIELFKEMIASTDIQPDEVTVASVLSACGHIGALKLSYWVLNIVQEKNIKLGISGLNSL 492
+IE+F M + + D VT+ S+ SACGH+GAL L+ W+ +++ I+L + +L
Sbjct: 464 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 523
Query: 493 IFMYSKCGSVVVAQRIFQNMGTRDVVTFNTLISGFAANGHGKEAIKLALTMEEEGIEPDH 552
+ M+S+CG A IF ++ RDV + I A G+ + AI+L M E+G++PD
Sbjct: 524 VDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDG 583
Query: 553 VTYIGVLTACSHAGLLKEGKNIFKSI-----KAPTVDHYACMVDLLGRAGELDEAKILIE 612
V ++G LTACSH GL+++GK IF S+ +P HY CMVDLLGRAG L+EA LIE
Sbjct: 584 VAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE 643
Query: 613 SMPMKPHAGVYGSLLNASRIHKRVELGELAAGKLLELEPQNPGNYVLLSNIYASAGRWED 672
MPM+P+ ++ SLL A R+ VE+ AA K+ L P+ G+YVLLSN+YASAGRW D
Sbjct: 644 DMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWND 703
Query: 673 VRKVREKMMKGGVKKSVGMSWVEYMGQIHKFSVGDRSHERSKDIYRLLAELERKMKRVGF 732
+ KVR M + G++K G S ++ G+ H+F+ GD SH +I +L E+ ++ +G
Sbjct: 704 MAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGH 763
Query: 733 VADKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTWTPIRVVKNLRICLDCHTAI 763
V D S L DV+E+EK ML HSEKLA+ + L+ S G T IR+VKNLR+C DCH+
Sbjct: 764 VPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKG--TTIRIVKNLRVCSDCHSFA 823
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023523920.1 | 0.0e+00 | 86.63 | pentatricopeptide repeat-containing protein At1g14470 [Cucurbita pepo subsp. pep... | [more] |
XP_022941407.1 | 0.0e+00 | 86.50 | pentatricopeptide repeat-containing protein At1g14470 [Cucurbita moschata] | [more] |
XP_022982206.1 | 0.0e+00 | 86.63 | pentatricopeptide repeat-containing protein At1g14470 [Cucurbita maxima] | [more] |
XP_022133377.1 | 0.0e+00 | 85.85 | pentatricopeptide repeat-containing protein At1g14470-like isoform X1 [Momordica... | [more] |
XP_038898615.1 | 0.0e+00 | 84.14 | pentatricopeptide repeat-containing protein At1g14470 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Q9M9R6 | 5.7e-149 | 50.19 | Pentatricopeptide repeat-containing protein At1g14470 OS=Arabidopsis thaliana OX... | [more] |
Q9LN01 | 1.8e-142 | 35.65 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Q9SY02 | 5.2e-142 | 38.77 | Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX... | [more] |
Q9LUJ2 | 3.8e-137 | 35.55 | Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX... | [more] |
Q9SHZ8 | 3.7e-132 | 34.70 | Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FMC6 | 0.0e+00 | 86.50 | pentatricopeptide repeat-containing protein At1g14470 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1IYP6 | 0.0e+00 | 86.63 | pentatricopeptide repeat-containing protein At1g14470 OS=Cucurbita maxima OX=366... | [more] |
A0A6J1BWI0 | 0.0e+00 | 85.85 | pentatricopeptide repeat-containing protein At1g14470-like isoform X1 OS=Momordi... | [more] |
A0A1S3BZ59 | 0.0e+00 | 81.91 | pentatricopeptide repeat-containing protein At1g14470 OS=Cucumis melo OX=3656 GN... | [more] |
A0A5D3DV14 | 0.0e+00 | 81.95 | Transmembrane protein 147 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... | [more] |
Match Name | E-value | Identity | Description | |
AT1G14470.1 | 4.0e-150 | 50.19 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G08070.1 | 1.3e-143 | 35.65 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G02750.1 | 3.7e-143 | 38.77 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G22690.2 | 2.7e-138 | 35.55 | INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic pro... | [more] |
AT3G22690.1 | 5.1e-137 | 35.47 | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012... | [more] |