Sed0008157 (gene) Chayote v1

Overview


Name	Sed0008157
Type	gene
Organism	Sechium edule (Chayote v1)
Description	indole-3-acetic acid-induced protein ARG2-like
Location	LG09: 36698810 .. 36700425 (+)
RNA-Seq Expression	Sed0008157
Synteny	Sed0008157

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTCCATTTTCAAAAACTGTTTCACAAACACTTAGAAACAAGCTCGAACCAGTCCTCTTCGCTGCTGTGGAAGATTTTCTCGAGAAACAATCGGTATTTATCGCTAAGAAAATCTTTCTTCACCACAGCAGCGAATCGTTTGATCCAATGGCTCGATATTTCTCCAACGTTAAGATCCTCTCCGCTCTTGTTTCCGATGGATTCTCCTCTGTTCTCAGCAGGTATTGGATCGATCTTCTTTCTCTAGTTCTTCGTTTTTGGTCGATTTCTGTATTGATTGATGCGATTTGTGTTTGTTCTTATCTGTTTACGCGCTGTACTTCATCTTCTTTCTCTTGGTCTTCGTTTTTCTTCGATTTCTGTTTCGATTGATGCGATTTTCTTATGTTGATGTTTGCTTAGGCGTGGTACTTCCTCTTCTTTCTCTTGATCTTCGTTTTTGTTCGATTTCTGTCTCGATTGATGCGTTTGTGTTTGTTTTAATTTGTTTAGGCGCTGTACTTCATCTTCTTTCTCTTGTTCTTCGTTTTGCTTCGATTTCTGTTTCGATTGATGCGATTTTCTTATGTTGATGTTTGCTTAGGCGTATACTTCATCTTCTTTCTCTTGTTCTTCGTTTTGCTGTGATTTCTGTTTCGATTGATGGGATTTTCTTATGTTGATGTCTGTTTAGGCTTGTTCGTCTCTTCTTTCTACTGTTTTTAGTTTTTCTTCGATTTCTGCTTCGATTGATGCTAATTTCTTATATTGATGATTGTTTAGGCGTGTTCTTCTTTTCTTTCTACTGTTATTAGTTTTTCTTCGATTTCTGTTTCGATGGATGCGGTTTTCTTATATTGATGATTGTTTTGTTTAGGCTTGGTACTTCTTTTTATTTCTCTTGTTATTTGTTTTTCTTCGATTGATGCTATTTTCATATGTTGATGATTGTTTGTTTAGGCGTGATTCTTCCTCTTATTTACATCTTGTTCTTCGTTTTTCTTCGATTGATGCGATTTTCTTATGCTGATATTTTTTCTGATTGCTGTTGATGTTGTTTGTTCAGGCGTGGTTATGCCGCGGCATCACAAGGAGTTGCGTCGAGTGCGGTGAAAGGAGGAAGTGTAGCAGCGGCGAGGAACAGCCATCTGTTGAAGAAATCAGGAGAAGAGAAGGTTGTTGGATCGACTGAGAAGGTTGCTTGGGTGCCGGATCCTGTCACTGGATACTACCGGCCGGAGAATCGCCTCGATGAGATCGATGTTGCCGAACTTCGATCCATTCTTCTCAAGAACAAGTACTGAAACTAATTTCTCGAACTGAATTGAAGAAATATAATAAAATTAATATTGATCTATGAAGCTAAAGAGGCCTTCGAGTTGCAGATCCAAGTTCGAATCGAAGTTTGAATGAGAGGAATGGATCGGGCGAGAGGCGATGGATTTGTGAAGCAGTTTGGGGATCTGATTACAGGTTCTTATGAATTTTATTGGCTGTGTTCTGTTTTTCATTTAGATGTTAAGTTTATTTCTCTATTATACTCTGTTTTTTTGTTAGAATTTGAATGTTTTCTGTGTACTGTGTAGTGTGTAATAGTATAATCCATAATGAATGAATGAAATAAACATTTCTACTA

mRNA sequence

ATCTCCATTTTCAAAAACTGTTTCACAAACACTTAGAAACAAGCTCGAACCAGTCCTCTTCGCTGCTGTGGAAGATTTTCTCGAGAAACAATCGGTATTTATCGCTAAGAAAATCTTTCTTCACCACAGCAGCGAATCGTTTGATCCAATGGCTCGATATTTCTCCAACGTTAAGATCCTCTCCGCTCTTGTTTCCGATGGATTCTCCTCTGTTCTCAGCAGGCGTGGTTATGCCGCGGCATCACAAGGAGTTGCGTCGAGTGCGGTGAAAGGAGGAAGTGTAGCAGCGGCGAGGAACAGCCATCTGTTGAAGAAATCAGGAGAAGAGAAGGTTGTTGGATCGACTGAGAAGGTTGCTTGGGTGCCGGATCCTGTCACTGGATACTACCGGCCGGAGAATCGCCTCGATGAGATCGATGTTGCCGAACTTCGATCCATTCTTCTCAAGAACAAGTACTGAAACTAATTTCTCGAACTGAATTGAAGAAATATAATAAAATTAATATTGATCTATGAAGCTAAAGAGGCCTTCGAGTTGCAGATCCAAGTTCGAATCGAAGTTTGAATGAGAGGAATGGATCGGGCGAGAGGCGATGGATTTGTGAAGCAGTTTGGGGATCTGATTACAGGTTCTTATGAATTTTATTGGCTGTGTTCTGTTTTTCATTTAGATGTTAAGTTTATTTCTCTATTATACTCTGTTTTTTTGTTAGAATTTGAATGTTTTCTGTGTACTGTGTAGTGTGTAATAGTATAATCCATAATGAATGAATGAAATAAACATTTCTACTA

Coding sequence (CDS)

ATGGCTCGATATTTCTCCAACGTTAAGATCCTCTCCGCTCTTGTTTCCGATGGATTCTCCTCTGTTCTCAGCAGGCGTGGTTATGCCGCGGCATCACAAGGAGTTGCGTCGAGTGCGGTGAAAGGAGGAAGTGTAGCAGCGGCGAGGAACAGCCATCTGTTGAAGAAATCAGGAGAAGAGAAGGTTGTTGGATCGACTGAGAAGGTTGCTTGGGTGCCGGATCCTGTCACTGGATACTACCGGCCGGAGAATCGCCTCGATGAGATCGATGTTGCCGAACTTCGATCCATTCTTCTCAAGAACAAGTACTGA

Protein sequence

MARYFSNVKILSALVSDGFSSVLSRRGYAAASQGVASSAVKGGSVAAARNSHLLKKSGEEKVVGSTEKVAWVPDPVTGYYRPENRLDEIDVAELRSILLKNKY

Homology

[Close]

BLAST of Sed0008157 vs. NCBI nr
Match: XP_022960392.1 (indole-3-acetic acid-induced protein ARG2-like [Cucurbita moschata] >XP_023004707.1 indole-3-acetic acid-induced protein ARG2-like [Cucurbita maxima] >KAG6593206.1 Indole-3-acetic acid-induced protein ARG2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030213.1 Indole-3-acetic acid-induced protein ARG2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 172.9 bits (437), Expect = 1.4e-39
Identity = 91/102 (89.22%), Postives = 96/102 (94.12%), Query Frame = 0


Query: 1   MARYFSNVKILSALVSDGFSSVLSRRGYAAASQGVASSAVKGGSVAAARNSHLLKKSGEE 60
           MAR FSNVK+LSALVSDGFSS LSRRGYAAASQGVASSAVKGGSVA AR+ ++LKKSGEE
Sbjct: 1   MARSFSNVKVLSALVSDGFSSALSRRGYAAASQGVASSAVKGGSVAVARSGNMLKKSGEE 60

Query: 61  KVVGSTEKVAWVPDPVTGYYRPENRLDEIDVAELRSILLKNK 103
           KVVGS+EKVAWVPDP TGYYRPENR DEIDVAELRSILLKNK
Sbjct: 61  KVVGSSEKVAWVPDPATGYYRPENRGDEIDVAELRSILLKNK 102

[Close]

BLAST of Sed0008157 vs. NCBI nr
Match: XP_023513499.1 (indole-3-acetic acid-induced protein ARG2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 171.8 bits (434), Expect = 3.1e-39
Identity = 90/102 (88.24%), Postives = 96/102 (94.12%), Query Frame = 0


Query: 1   MARYFSNVKILSALVSDGFSSVLSRRGYAAASQGVASSAVKGGSVAAARNSHLLKKSGEE 60
           MAR FSNVK+LSALVSDGFSS LSRRGYAAASQGVASSAVKGGSV+ AR+ ++LKKSGEE
Sbjct: 1   MARSFSNVKVLSALVSDGFSSALSRRGYAAASQGVASSAVKGGSVSVARSGNMLKKSGEE 60

Query: 61  KVVGSTEKVAWVPDPVTGYYRPENRLDEIDVAELRSILLKNK 103
           KVVGS+EKVAWVPDP TGYYRPENR DEIDVAELRSILLKNK
Sbjct: 61  KVVGSSEKVAWVPDPATGYYRPENRGDEIDVAELRSILLKNK 102

[Close]

BLAST of Sed0008157 vs. NCBI nr
Match: XP_023548996.1 (indole-3-acetic acid-induced protein ARG2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 170.6 bits (431), Expect = 6.9e-39
Identity = 91/104 (87.50%), Postives = 98/104 (94.23%), Query Frame = 0


Query: 1   MARYFSNVKILSALVSDGFSSVLSRRGYAA--ASQGVASSAVKGGSVAAARNSHLLKKSG 60
           MAR FSNVK+LSALV+DGFSS LSRRGYAA  ASQGVASSAVKGGSVAAARNS+LLKKSG
Sbjct: 1   MARSFSNVKVLSALVADGFSSALSRRGYAAATASQGVASSAVKGGSVAAARNSNLLKKSG 60

Query: 61  EEKVVGSTEKVAWVPDPVTGYYRPENRLDEIDVAELRSILLKNK 103
           EEKVVGS+EKV+WVPDPVTGYYRPENR DEIDVAELRS+LL N+
Sbjct: 61  EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNR 104

[Close]

BLAST of Sed0008157 vs. NCBI nr
Match: XP_022991270.1 (indole-3-acetic acid-induced protein ARG2-like [Cucurbita maxima])

HSP 1 Score: 169.9 bits (429), Expect = 1.2e-38
Identity = 90/104 (86.54%), Postives = 98/104 (94.23%), Query Frame = 0


Query: 1   MARYFSNVKILSALVSDGFSSVLSRRGYAA--ASQGVASSAVKGGSVAAARNSHLLKKSG 60
           MAR FSNVK+LSA+V+DGFSS LSRRGYAA  ASQGVASSAVKGGSVAAARNS+LLKKSG
Sbjct: 1   MARSFSNVKVLSAIVADGFSSALSRRGYAAAPASQGVASSAVKGGSVAAARNSNLLKKSG 60

Query: 61  EEKVVGSTEKVAWVPDPVTGYYRPENRLDEIDVAELRSILLKNK 103
           EEKVVGS+EKV+WVPDPVTGYYRPENR DEIDVAELRS+LL N+
Sbjct: 61  EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNR 104

[Close]

BLAST of Sed0008157 vs. NCBI nr
Match: XP_038900137.1 (indole-3-acetic acid-induced protein ARG2 [Benincasa hispida])

HSP 1 Score: 167.5 bits (423), Expect = 5.9e-38
Identity = 90/102 (88.24%), Postives = 96/102 (94.12%), Query Frame = 0


Query: 1   MARYFSNVKILSALVSDGFSSVLSRRGYAAASQGVASSAVKGGSVAAARNSHLLKKSGEE 60
           MAR FSNVKILSALV+DGFSS L+RRGY  ASQG+ASS VKGGSVAAARNS+LLKKSGEE
Sbjct: 1   MARSFSNVKILSALVADGFSSTLTRRGY--ASQGLASSLVKGGSVAAARNSNLLKKSGEE 60

Query: 61  KVVGSTEKVAWVPDPVTGYYRPENRLDEIDVAELRSILLKNK 103
           KVVGS+EKV+WVPDPVTGYYRPENR DEIDVAELRSILLKNK
Sbjct: 61  KVVGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSILLKNK 100

[Close]

BLAST of Sed0008157 vs. ExPASy Swiss-Prot
Match: P32292 (Indole-3-acetic acid-induced protein ARG2 OS=Vigna radiata var. radiata OX=3916 GN=ARG2 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.8e-21
Identity = 59/103 (57.28%), Postives = 78/103 (75.73%), Query Frame = 0


Query: 1   MARYFSNVKILSALVSDGFSSVLSRRGYAAASQGVASSAVKGGSVAAARNSHLLKKSGEE 60
           MAR F+NVK+LSALV+DGFS+  +R G+AAA+     SA +GG   A+   +++ KSGEE
Sbjct: 1   MARSFTNVKVLSALVADGFSNTTTRHGFAAAA-AATQSATRGG---ASIGGNMVPKSGEE 60

Query: 61  KVVGSTEKVAWVPDPVTGYYRPENRLDEIDVAELRSILLKNKY 104
           KV G  EKV+WVPDPVTGYYRPEN  +EIDVA++R+ +L  K+
Sbjct: 61  KVRGG-EKVSWVPDPVTGYYRPEN-TNEIDVADMRATVLGKKF 97

[Close]

BLAST of Sed0008157 vs. ExPASy Swiss-Prot
Match: Q93WF6 (Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SAG21 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.7e-19
Identity = 58/103 (56.31%), Postives = 73/103 (70.87%), Query Frame = 0


Query: 1   MARYFSNVKILSALVSDGFSSVLSRRGYAA-ASQGVASSAVKGGSVAAARNSHLLKKSGE 60
           MAR  SNVKI+SA VS   S+ + RRGYAA A+QG  SS  + G+VA+A    ++KK G 
Sbjct: 1   MARSISNVKIVSAFVSRELSNAIFRRGYAATAAQGSVSSGGRSGAVASA----VMKKKGV 60

Query: 61  EKVVGSTEKVAWVPDPVTGYYRPENRLDEIDVAELRSILLKNK 103
           E+   ST+K++WVPDP TGYYRPE   +EID AELR+ LL NK
Sbjct: 61  EE---STQKISWVPDPKTGYYRPETGSNEIDAAELRAALLNNK 96

[Close]

BLAST of Sed0008157 vs. ExPASy Swiss-Prot
Match: Q9SRX6 (Late embryogenis abundant protein 2 OS=Arabidopsis thaliana OX=3702 GN=LEA2 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 8.0e-14
Identity = 49/102 (48.04%), Postives = 63/102 (61.76%), Query Frame = 0


Query: 1   MARYFSNVKILSALVSDGFSSVLSRRGYAAASQGVASSAVKGGSVAAARNSHLLKKSGEE 60
           MAR  +N KI S   S+  S+ + RRG+AAA++         GSV+ A    + K++GE 
Sbjct: 1   MARSLANAKIQSVFGSEKLSNAVFRRGFAAAAK-----TALDGSVSTA---EMKKRAGE- 60

Query: 61  KVVGSTEKVAWVPDPVTGYYRPENRLDEIDVAELRSILLKNK 103
               S+EK  WVPDP TGYYRPE   +EID AELR+ILL NK
Sbjct: 61  ---ASSEKAPWVPDPKTGYYRPETVSEEIDPAELRAILLNNK 90

[Close]

BLAST of Sed0008157 vs. ExPASy Swiss-Prot
Match: Q39644 (Late embryogenesis abundant protein Lea5 OS=Citrus sinensis OX=2711 GN=LEA5 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 4.4e-12
Identity = 45/104 (43.27%), Postives = 58/104 (55.77%), Query Frame = 0


Query: 1   MARYFSNVKILSALVSDGFSSVLSRRGYAAASQGVASSAVKGGSVAAARNSHLLKKSGEE 60
           MAR     K+L A V+DG S  +SRRGYAAA+            +     + +++K+   
Sbjct: 1   MARSLFKAKLLLAPVADGISLSISRRGYAAAA-----------PLGTISRTGIMEKNDLR 60

Query: 61  KVV--GSTEKVAWVPDPVTGYYRPENRLDEIDVAELRSILLKNK 103
             V   S    AW PDP+TGYYRPENR  EID AELR +LL +K
Sbjct: 61  PAVREDSGASSAWAPDPITGYYRPENRAVEIDPAELREMLLNHK 93

[Close]

BLAST of Sed0008157 vs. ExPASy Swiss-Prot
Match: P46522 (Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum OX=3635 GN=LEA5-D PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.7e-11
Identity = 43/103 (41.75%), Postives = 59/103 (57.28%), Query Frame = 0


Query: 1   MARYFSNVKILSALVSDGFSSVLSRRGYAAA-SQGVASSAVKGGSVAAARNSHLLKKSGE 60
           MAR  S+ K+L A + DG    +SRRGY+ A    V +S  + G++        +K+S  
Sbjct: 1   MARSVSSFKLLGASIFDGLYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRDAMKESSS 60

Query: 61  EKVVGSTEKVAWVPDPVTGYYRPENRLDEIDVAELRSILLKNK 103
            +    +   AW PDPVTGYYRPEN   EID AELR +LL ++
Sbjct: 61  SETRAYSS--AWAPDPVTGYYRPENCGAEIDAAELREMLLNHR 101

[Close]

BLAST of Sed0008157 vs. ExPASy TrEMBL
Match: A0A6J1KR71 (indole-3-acetic acid-induced protein ARG2-like OS=Cucurbita maxima OX=3661 GN=LOC111497923 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 6.7e-40
Identity = 91/102 (89.22%), Postives = 96/102 (94.12%), Query Frame = 0


Query: 1   MARYFSNVKILSALVSDGFSSVLSRRGYAAASQGVASSAVKGGSVAAARNSHLLKKSGEE 60
           MAR FSNVK+LSALVSDGFSS LSRRGYAAASQGVASSAVKGGSVA AR+ ++LKKSGEE
Sbjct: 1   MARSFSNVKVLSALVSDGFSSALSRRGYAAASQGVASSAVKGGSVAVARSGNMLKKSGEE 60

Query: 61  KVVGSTEKVAWVPDPVTGYYRPENRLDEIDVAELRSILLKNK 103
           KVVGS+EKVAWVPDP TGYYRPENR DEIDVAELRSILLKNK
Sbjct: 61  KVVGSSEKVAWVPDPATGYYRPENRGDEIDVAELRSILLKNK 102

[Close]

BLAST of Sed0008157 vs. ExPASy TrEMBL
Match: A0A6J1H796 (indole-3-acetic acid-induced protein ARG2-like OS=Cucurbita moschata OX=3662 GN=LOC111461128 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 6.7e-40
Identity = 91/102 (89.22%), Postives = 96/102 (94.12%), Query Frame = 0


Query: 1   MARYFSNVKILSALVSDGFSSVLSRRGYAAASQGVASSAVKGGSVAAARNSHLLKKSGEE 60
           MAR FSNVK+LSALVSDGFSS LSRRGYAAASQGVASSAVKGGSVA AR+ ++LKKSGEE
Sbjct: 1   MARSFSNVKVLSALVSDGFSSALSRRGYAAASQGVASSAVKGGSVAVARSGNMLKKSGEE 60

Query: 61  KVVGSTEKVAWVPDPVTGYYRPENRLDEIDVAELRSILLKNK 103
           KVVGS+EKVAWVPDP TGYYRPENR DEIDVAELRSILLKNK
Sbjct: 61  KVVGSSEKVAWVPDPATGYYRPENRGDEIDVAELRSILLKNK 102

[Close]

BLAST of Sed0008157 vs. ExPASy TrEMBL
Match: A0A6J1JSE9 (indole-3-acetic acid-induced protein ARG2-like OS=Cucurbita maxima OX=3661 GN=LOC111487971 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 5.7e-39
Identity = 90/104 (86.54%), Postives = 98/104 (94.23%), Query Frame = 0


Query: 1   MARYFSNVKILSALVSDGFSSVLSRRGYAA--ASQGVASSAVKGGSVAAARNSHLLKKSG 60
           MAR FSNVK+LSA+V+DGFSS LSRRGYAA  ASQGVASSAVKGGSVAAARNS+LLKKSG
Sbjct: 1   MARSFSNVKVLSAIVADGFSSALSRRGYAAAPASQGVASSAVKGGSVAAARNSNLLKKSG 60

Query: 61  EEKVVGSTEKVAWVPDPVTGYYRPENRLDEIDVAELRSILLKNK 103
           EEKVVGS+EKV+WVPDPVTGYYRPENR DEIDVAELRS+LL N+
Sbjct: 61  EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNR 104

[Close]

BLAST of Sed0008157 vs. ExPASy TrEMBL
Match: A0A5D3D3A4 (Indole-3-acetic acid-induced protein ARG2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00680 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 3.7e-38
Identity = 91/104 (87.50%), Postives = 97/104 (93.27%), Query Frame = 0


Query: 1   MARYFSNVKILSALVSDGFSSVLSRRGYAAA--SQGVASSAVKGGSVAAARNSHLLKKSG 60
           MAR FSNVKILSA+VSDGFSS+L+ RGYAAA  SQGVASSAVKG  VAAAR+S+LLKKSG
Sbjct: 1   MARSFSNVKILSAVVSDGFSSLLTSRGYAAAAGSQGVASSAVKGAGVAAARSSNLLKKSG 60

Query: 61  EEKVVGSTEKVAWVPDPVTGYYRPENRLDEIDVAELRSILLKNK 103
           EEKVVGSTEKV+WVPDPVTGYYRPENR DEIDVAELRSILLKNK
Sbjct: 61  EEKVVGSTEKVSWVPDPVTGYYRPENRCDEIDVAELRSILLKNK 104

[Close]

BLAST of Sed0008157 vs. ExPASy TrEMBL
Match: A0A1S3BRT2 (indole-3-acetic acid-induced protein ARG2-like OS=Cucumis melo OX=3656 GN=LOC103492803 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 3.7e-38
Identity = 91/104 (87.50%), Postives = 97/104 (93.27%), Query Frame = 0


Query: 1   MARYFSNVKILSALVSDGFSSVLSRRGYAAA--SQGVASSAVKGGSVAAARNSHLLKKSG 60
           MAR FSNVKILSA+VSDGFSS+L+ RGYAAA  SQGVASSAVKG  VAAAR+S+LLKKSG
Sbjct: 1   MARSFSNVKILSAVVSDGFSSLLTSRGYAAAAGSQGVASSAVKGAGVAAARSSNLLKKSG 60

Query: 61  EEKVVGSTEKVAWVPDPVTGYYRPENRLDEIDVAELRSILLKNK 103
           EEKVVGSTEKV+WVPDPVTGYYRPENR DEIDVAELRSILLKNK
Sbjct: 61  EEKVVGSTEKVSWVPDPVTGYYRPENRCDEIDVAELRSILLKNK 104

[Close]

BLAST of Sed0008157 vs. TAIR 10
Match: AT4G02380.1 (senescence-associated gene 21 )

HSP 1 Score: 96.7 bits (239), Expect = 1.2e-20
Identity = 58/103 (56.31%), Postives = 73/103 (70.87%), Query Frame = 0


Query: 1   MARYFSNVKILSALVSDGFSSVLSRRGYAA-ASQGVASSAVKGGSVAAARNSHLLKKSGE 60
           MAR  SNVKI+SA VS   S+ + RRGYAA A+QG  SS  + G+VA+A    ++KK G 
Sbjct: 1   MARSISNVKIVSAFVSRELSNAIFRRGYAATAAQGSVSSGGRSGAVASA----VMKKKGV 60

Query: 61  EKVVGSTEKVAWVPDPVTGYYRPENRLDEIDVAELRSILLKNK 103
           E+   ST+K++WVPDP TGYYRPE   +EID AELR+ LL NK
Sbjct: 61  EE---STQKISWVPDPKTGYYRPETGSNEIDAAELRAALLNNK 96

[Close]

BLAST of Sed0008157 vs. TAIR 10
Match: AT1G02820.1 (Late embryogenesis abundant 3 (LEA3) family protein )

HSP 1 Score: 77.8 bits (190), Expect = 5.7e-15
Identity = 49/102 (48.04%), Postives = 63/102 (61.76%), Query Frame = 0


Query: 1   MARYFSNVKILSALVSDGFSSVLSRRGYAAASQGVASSAVKGGSVAAARNSHLLKKSGEE 60
           MAR  +N KI S   S+  S+ + RRG+AAA++         GSV+ A    + K++GE 
Sbjct: 1   MARSLANAKIQSVFGSEKLSNAVFRRGFAAAAK-----TALDGSVSTA---EMKKRAGE- 60

Query: 61  KVVGSTEKVAWVPDPVTGYYRPENRLDEIDVAELRSILLKNK 103
               S+EK  WVPDP TGYYRPE   +EID AELR+ILL NK
Sbjct: 61  ---ASSEKAPWVPDPKTGYYRPETVSEEIDPAELRAILLNNK 90

[Close]

BLAST of Sed0008157 vs. TAIR 10
Match: AT4G02380.2 (senescence-associated gene 21 )

HSP 1 Score: 75.9 bits (185), Expect = 2.2e-14
Identity = 44/79 (55.70%), Postives = 57/79 (72.15%), Query Frame = 0


Query: 25  RRGYAA-ASQGVASSAVKGGSVAAARNSHLLKKSGEEKVVGSTEKVAWVPDPVTGYYRPE 84
           +RGYAA A+QG  SS  + G+VA+A    ++KK G E+   ST+K++WVPDP TGYYRPE
Sbjct: 6   KRGYAATAAQGSVSSGGRSGAVASA----VMKKKGVEE---STQKISWVPDPKTGYYRPE 65

Query: 85  NRLDEIDVAELRSILLKNK 103
              +EID AELR+ LL NK
Sbjct: 66  TGSNEIDAAELRAALLNNK 77

[Close]

BLAST of Sed0008157 vs. TAIR 10
Match: AT4G15910.1 (drought-induced 21 )

HSP 1 Score: 69.3 bits (168), Expect = 2.0e-12
Identity = 44/97 (45.36%), Postives = 58/97 (59.79%), Query Frame = 0


Query: 8   VKILSALVSDGFS-SVLSRRGYAAASQGVASSAV-KGGSVAAARNSHLLKKSGEEKVVGS 67
           VK L +  S   S S++ RR Y A SQ V ++ + KGGS      + ++    E++ +  
Sbjct: 10  VKSLCSAASGSLSCSIVLRRSYVATSQNVTAAGLSKGGS------TRVMVGKMEQRGLDQ 69

Query: 68  TEKVAWVPDPVTGYYRPENRLDEIDVAELRSILLKNK 103
             + AW PDPVTGYYRP NR  EID AELR +LLKNK
Sbjct: 70  EAESAWGPDPVTGYYRPSNRAAEIDPAELRELLLKNK 100

[Close]

BLAST of Sed0008157 vs. TAIR 10
Match: AT3G53770.1 (late embryogenesis abundant 3 (LEA3) family protein )

HSP 1 Score: 45.8 bits (107), Expect = 2.4e-05
Identity = 21/54 (38.89%), Postives = 33/54 (61.11%), Query Frame = 0


Query: 44  SVAAARNSHLLKKSGEEKVVGSTEKVAWVPDPVTGYYRPENRLDEIDVAELRSI 98
           + A   + ++ K S  +  +   E++ W+PDP TGYYRP+N   E+D  ELRS+
Sbjct: 59  TAAKELDPYIAKTSQVQGKMMRGEELWWMPDPQTGYYRPDNFARELDAVELRSL 112

The following BLAST results are available for this feature:

BLAST of Sed0008157 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960392.1	1.4e-39	89.22	indole-3-acetic acid-induced protein ARG2-like [Cucurbita moschata] >XP_02300470...	[more]
XP_023513499.1	3.1e-39	88.24	indole-3-acetic acid-induced protein ARG2-like [Cucurbita pepo subsp. pepo]	[more]
XP_023548996.1	6.9e-39	87.50	indole-3-acetic acid-induced protein ARG2 [Cucurbita pepo subsp. pepo]	[more]
XP_022991270.1	1.2e-38	86.54	indole-3-acetic acid-induced protein ARG2-like [Cucurbita maxima]	[more]
XP_038900137.1	5.9e-38	88.24	indole-3-acetic acid-induced protein ARG2 [Benincasa hispida]	[more]

BLAST of Sed0008157 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P32292	1.8e-21	57.28	Indole-3-acetic acid-induced protein ARG2 OS=Vigna radiata var. radiata OX=3916 ...	[more]
Q93WF6	1.7e-19	56.31	Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial OS=Arabidopsis thaliana OX=...	[more]
Q9SRX6	8.0e-14	48.04	Late embryogenis abundant protein 2 OS=Arabidopsis thaliana OX=3702 GN=LEA2 PE=2...	[more]
Q39644	4.4e-12	43.27	Late embryogenesis abundant protein Lea5 OS=Citrus sinensis OX=2711 GN=LEA5 PE=2...	[more]
P46522	1.7e-11	41.75	Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum OX=3635 GN=LEA5...	[more]

BLAST of Sed0008157 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KR71	6.7e-40	89.22	indole-3-acetic acid-induced protein ARG2-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1H796	6.7e-40	89.22	indole-3-acetic acid-induced protein ARG2-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1JSE9	5.7e-39	86.54	indole-3-acetic acid-induced protein ARG2-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A5D3D3A4	3.7e-38	87.50	Indole-3-acetic acid-induced protein ARG2-like OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BRT2	3.7e-38	87.50	indole-3-acetic acid-induced protein ARG2-like OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of Sed0008157 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02380.1	1.2e-20	56.31	senescence-associated gene 21	[more]
AT1G02820.1	5.7e-15	48.04	Late embryogenesis abundant 3 (LEA3) family protein	[more]
AT4G02380.2	2.2e-14	55.70	senescence-associated gene 21	[more]
AT4G15910.1	2.0e-12	45.36	drought-induced 21	[more]
AT3G53770.1	2.4e-05	38.89	late embryogenesis abundant 3 (LEA3) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004926	Late embryogenesis abundant protein, LEA_3 subgroup	PFAM	PF03242	LEA_3	coord: 1..99 e-value: 9.6E-31 score: 106.4
IPR004926	Late embryogenesis abundant protein, LEA_3 subgroup	PANTHER	PTHR33509	LATE EMBRYOGENIS ABUNDANT PROTEIN 2-RELATED	coord: 1..102
None	No IPR available	PANTHER	PTHR33509:SF5	LATE EMBRYOGENIS ABUNDANT PROTEIN 2	coord: 1..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0008157.1	Sed0008157.1	mRNA