Sed0008097 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGTAAAAATTTTGCGTATCCATTGTATATCTGTTTACCTGTCCATTCTCTATATTTCTGCTGCTATATTGATGTGCTCTGTAGTTCCTTGTTCTTTATTCAAAGAACAAGATTTCTCTCTATTGGGCTTTTGGTTTTTTTGCACCTTGAGGTCACAGGAAAAATGGATAAAAAATACCAATAGGGAGACGTTGGATGTCGTTATCCTTATTGATCTGGTGGGTTTTTTTCGTTGTGTCCCAGTTCGTTGAGATGTTCAGAGTTGGGCCCTAATCCTGATGAGTGGTTTTCTTATCTCTTTTTTCTCCCCTGTTGTATGTCTTTTTTTTTTTTCTTCATTGAGAGATTCAGTTTTTTATTCACCGTGAAAGGTGGAAATTCCGAAAAAATTCTAAGTTTTTTCATCTTTATGGTTATTCATAGTAAGGTTTATACATTTGATAGGGTTATGAGAAAAGCCATCCCTTTTGTAGGTCTACATGTATCTTGTGTAGAACAGCGGTCTCCTACCACAGTTCAACTTGAGTTAGTGTCAACCATGTTCCACAAAACTTGCTTCATTAAGCAGCTCCTTTTCTGAAGCAAGTCAAATATTTTTGTTGGAAATGCTTAGCCTCAGTGTTTCATAAAAACTTGGCTAGGAAAAAGCCACAAAATCTTCAGGGAAGCATTGCAACATTAATGAAGTTTGGATATTAGTCACTTCAGATCTTTTACTTTGTGCTCCTCTATTACTTTTTTTGTATATTTAGATATCTTTTTTTCCACTGAAGAATTTTCTCTATTCTCCTCGACTTATTTGGGCTGATATCTTATCATGTGCTTTTGTATCTCCTTTTTCTCACCATTCTGGATCAAATATAAAATGCCCATTCCAATTAAGTGCATGTTACGGTATCTCTGTTGGCTGTTTCTTAATATTTTGTCTGCATCAACACATTAAAAGTGGTATCTTTTAATCAACTGGATATGCTATTAGAATTTCCTTAACCCAGATACCCTCTGCTAACATGTGTTTTGGGTCCAAAAAGAGTAAGTTCCTTTTCTCTATTCTTATAGTTGCTTCTGTTAAGTGTAATTAGATTAACCAACCAATTACTTATCGTAGTATAATTTCATCCCTTGTGTAAAATATAGGTGGCATGCTGTTGCATCATGGACTTGGAATGCTCAAGATGAAACATGTGGAATTTGTAGGATGGCTTTTGATGGTTGTTGCCCTGATTGCAAACTTCCTGGAGATGATTGCCCATTGAGTGAGTCAACTAGCCTTGTCTTCCTTTTCTCAGTTTCTCTTGCCATCAATTATTGCACCTCACAGTTTAGCACAAATAATTGGTAAGCTTAGGATCATGTGTATGTGTGTGTACAACTCACATACATTCGAAAGTAACCTCGAAATACTATCTAATTGCTTCTATATAGATAAAAACAACTCACATACATGCAAGTGAGCTCGAAATTCCATTTAACTGGTTCTCTAGTTAAAAAGAAAATGAAGGTTCCGCTGTGTTTAAGTACATTCCAGCTTGATCAAACCATATTTTGTTAGTTCATATTTTCTTTAAAACGTTTCTTTTTTTTGAATTAGGGTCCTTAAAACGTTTCTTTTTCTTTGAATTTGGGTGCTGGGGCAAGTAGAATGGGAATTGATTACAGGGAAAGATGAGAATACGAGAGAAAATGATAATCAAAGAAAATGACTATCTGTGTTTAGAGCGAAGAAAATGATTATAGTGAAAATGATTATCTGTGTTTGGGTGCAGAAAATGATTATTTGTGATTTGGTGTAGAAAATAATTATAGGAAAATGATTGTTTGTGTTTGGGATGAGAAACATAATTATTAGGAGAAAAAAATAGTAAATATTGTGAGAATGAGAATTGAGAAGTAGTTAGTGAAGGATGAAAACTGGTTCCGGAGAAGAGCTTATGGAGAGAATGAATATTGATTATGAGGGAATGATTATAGATGGCTGAAACATGGATACGAAAATTATTCCCATTTTTTTGGTCCAAACACTTTTAAATGGTAATGGCCTCTTATTCAGTTTTTGTTTTAAATGCAGTTTGGGGTGCATGCAACCATGCTTTTCATCTTCATTGCATCCTCAAATGGGTGAATTCACAGACATCTCAAGCACATTGCCCCATGTGCCGTAGAGAATGGCAATTCAAGGAGTGA ATGAAAGTAAAAATTTTGCGTATCCATTGTATATCTGTTTACCTGTGGCATGCTGTTGCATCATGGACTTGGAATGCTCAAGATGAAACATGTGGAATTTGTAGGATGGCTTTTGATGGTTGTTGCCCTGATTGCAAACTTCCTGGAGATGATTGCCCATTGATTTGGGGTGCATGCAACCATGCTTTTCATCTTCATTGCATCCTCAAATGGGTGAATTCACAGACATCTCAAGCACATTGCCCCATGTGCCGTAGAGAATGGCAATTCAAGGAGTGA ATGAAAGTAAAAATTTTGCGTATCCATTGTATATCTGTTTACCTGTGGCATGCTGTTGCATCATGGACTTGGAATGCTCAAGATGAAACATGTGGAATTTGTAGGATGGCTTTTGATGGTTGTTGCCCTGATTGCAAACTTCCTGGAGATGATTGCCCATTGATTTGGGGTGCATGCAACCATGCTTTTCATCTTCATTGCATCCTCAAATGGGTGAATTCACAGACATCTCAAGCACATTGCCCCATGTGCCGTAGAGAATGGCAATTCAAGGAGTGA MKVKILRIHCISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE Homology
BLAST of Sed0008097 vs. NCBI nr
Match: KAF5463601.1 (hypothetical protein F2P56_013763 [Juglans regia] >KAF5464089.1 hypothetical protein F2P56_014198 [Juglans regia]) HSP 1 Score: 197.6 bits (501), Expect = 4.7e-47 Identity = 84/92 (91.30%), Postives = 87/92 (94.57%), Query Frame = 0
BLAST of Sed0008097 vs. NCBI nr
Match: XP_035547560.1 (anaphase-promoting complex subunit 11 isoform X8 [Juglans regia] >XP_035547561.1 anaphase-promoting complex subunit 11 isoform X8 [Juglans regia] >XP_035547677.1 anaphase-promoting complex subunit 11 isoform X8 [Juglans regia] >XP_035547678.1 anaphase-promoting complex subunit 11 isoform X8 [Juglans regia] >XP_040994227.1 anaphase-promoting complex subunit 11 isoform X9 [Juglans microcarpa x Juglans regia] >XP_040994231.1 anaphase-promoting complex subunit 11 isoform X9 [Juglans microcarpa x Juglans regia]) HSP 1 Score: 197.6 bits (501), Expect = 4.7e-47 Identity = 84/92 (91.30%), Postives = 87/92 (94.57%), Query Frame = 0
BLAST of Sed0008097 vs. NCBI nr
Match: NP_001189819.1 (anaphase-promoting complex/cyclosome 11 [Arabidopsis thaliana] >NP_001325492.1 anaphase-promoting complex/cyclosome 11 [Arabidopsis thaliana] >NP_187238.2 anaphase-promoting complex/cyclosome 11 [Arabidopsis thaliana] >EFH39874.1 anaphase promoting complex subunit 11 [Arabidopsis lyrata subsp. lyrata] >AEE74309.1 anaphase-promoting complex/cyclosome 11 [Arabidopsis thaliana] >AEE74310.1 anaphase-promoting complex/cyclosome 11 [Arabidopsis thaliana] >ANM63402.1 anaphase-promoting complex/cyclosome 11 [Arabidopsis thaliana]) HSP 1 Score: 197.2 bits (500), Expect = 6.2e-47 Identity = 85/92 (92.39%), Postives = 86/92 (93.48%), Query Frame = 0
BLAST of Sed0008097 vs. NCBI nr
Match: XP_035547557.1 (anaphase-promoting complex subunit 11 isoform X7 [Juglans regia] >XP_035547558.1 anaphase-promoting complex subunit 11 isoform X7 [Juglans regia] >XP_035547559.1 anaphase-promoting complex subunit 11 isoform X7 [Juglans regia] >XP_035547674.1 anaphase-promoting complex subunit 11 isoform X7 [Juglans regia] >XP_035547675.1 anaphase-promoting complex subunit 11 isoform X7 [Juglans regia] >XP_035547676.1 anaphase-promoting complex subunit 11 isoform X7 [Juglans regia] >XP_040994217.1 anaphase-promoting complex subunit 11 isoform X8 [Juglans microcarpa x Juglans regia] >XP_040994221.1 anaphase-promoting complex subunit 11 isoform X8 [Juglans microcarpa x Juglans regia]) HSP 1 Score: 196.4 bits (498), Expect = 1.1e-46 Identity = 84/93 (90.32%), Postives = 87/93 (93.55%), Query Frame = 0
BLAST of Sed0008097 vs. NCBI nr
Match: KAF5463602.1 (hypothetical protein F2P56_013763 [Juglans regia] >KAF5464091.1 hypothetical protein F2P56_014198 [Juglans regia]) HSP 1 Score: 196.4 bits (498), Expect = 1.1e-46 Identity = 84/93 (90.32%), Postives = 87/93 (93.55%), Query Frame = 0
BLAST of Sed0008097 vs. ExPASy Swiss-Prot
Match: Q9M9L0 (Anaphase-promoting complex subunit 11 OS=Arabidopsis thaliana OX=3702 GN=APC11 PE=1 SV=3) HSP 1 Score: 192.2 bits (487), Expect = 2.6e-48 Identity = 82/92 (89.13%), Postives = 84/92 (91.30%), Query Frame = 0
BLAST of Sed0008097 vs. ExPASy Swiss-Prot
Match: Q3ZCF6 (Anaphase-promoting complex subunit 11 OS=Bos taurus OX=9913 GN=ANAPC11 PE=3 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 3.5e-37 Identity = 56/82 (68.29%), Postives = 69/82 (84.15%), Query Frame = 0
BLAST of Sed0008097 vs. ExPASy Swiss-Prot
Match: Q9CPX9 (Anaphase-promoting complex subunit 11 OS=Mus musculus OX=10090 GN=Anapc11 PE=3 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 3.5e-37 Identity = 56/82 (68.29%), Postives = 69/82 (84.15%), Query Frame = 0
BLAST of Sed0008097 vs. ExPASy Swiss-Prot
Match: Q9NYG5 (Anaphase-promoting complex subunit 11 OS=Homo sapiens OX=9606 GN=ANAPC11 PE=1 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 1.3e-36 Identity = 55/82 (67.07%), Postives = 69/82 (84.15%), Query Frame = 0
BLAST of Sed0008097 vs. ExPASy Swiss-Prot
Match: Q5R8A2 (Anaphase-promoting complex subunit 11 OS=Pongo abelii OX=9601 GN=ANAPC11 PE=3 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 1.3e-36 Identity = 55/82 (67.07%), Postives = 69/82 (84.15%), Query Frame = 0
BLAST of Sed0008097 vs. ExPASy TrEMBL
Match: A0A2I4HDV5 (Anaphase-promoting complex subunit 11 OS=Juglans regia OX=51240 GN=LOC109016305 PE=4 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 2.3e-47 Identity = 84/92 (91.30%), Postives = 87/92 (94.57%), Query Frame = 0
BLAST of Sed0008097 vs. ExPASy TrEMBL
Match: D7MN37 (Anaphase-promoting complex subunit 11 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_330997 PE=4 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 3.0e-47 Identity = 85/92 (92.39%), Postives = 86/92 (93.48%), Query Frame = 0
BLAST of Sed0008097 vs. ExPASy TrEMBL
Match: A0A1I9LLE4 (Anaphase-promoting complex subunit 11 OS=Arabidopsis thaliana OX=3702 GN=APC11 PE=1 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 3.0e-47 Identity = 85/92 (92.39%), Postives = 86/92 (93.48%), Query Frame = 0
BLAST of Sed0008097 vs. ExPASy TrEMBL
Match: A0A2I4HDN9 (Anaphase-promoting complex subunit 11 OS=Juglans regia OX=51240 GN=LOC109016305 PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 5.1e-47 Identity = 84/93 (90.32%), Postives = 87/93 (93.55%), Query Frame = 0
BLAST of Sed0008097 vs. ExPASy TrEMBL
Match: A0A2I4HJW5 (Anaphase-promoting complex subunit 11 OS=Juglans regia OX=51240 GN=LOC109005258 PE=4 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 1.1e-46 Identity = 85/97 (87.63%), Postives = 90/97 (92.78%), Query Frame = 0
BLAST of Sed0008097 vs. TAIR 10
Match: AT3G05870.1 (anaphase-promoting complex/cyclosome 11 ) HSP 1 Score: 197.2 bits (500), Expect = 5.7e-51 Identity = 85/92 (92.39%), Postives = 86/92 (93.48%), Query Frame = 0
BLAST of Sed0008097 vs. TAIR 10
Match: AT3G05870.2 (anaphase-promoting complex/cyclosome 11 ) HSP 1 Score: 197.2 bits (500), Expect = 5.7e-51 Identity = 85/92 (92.39%), Postives = 86/92 (93.48%), Query Frame = 0
BLAST of Sed0008097 vs. TAIR 10
Match: AT5G20570.1 (RING-box 1 ) HSP 1 Score: 77.0 bits (188), Expect = 8.7e-15 Identity = 32/82 (39.02%), Postives = 46/82 (56.10%), Query Frame = 0
BLAST of Sed0008097 vs. TAIR 10
Match: AT3G42830.1 (RING/U-box superfamily protein ) HSP 1 Score: 74.7 bits (182), Expect = 4.3e-14 Identity = 32/82 (39.02%), Postives = 45/82 (54.88%), Query Frame = 0
BLAST of Sed0008097 vs. TAIR 10
Match: AT5G26640.1 (BEST Arabidopsis thaliana protein match is: anaphase-promoting complex/cyclosome 11 (TAIR:AT3G05870.2); Has 293 Blast hits to 293 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 128; Fungi - 102; Plants - 41; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). ) HSP 1 Score: 68.9 bits (167), Expect = 2.4e-12 Identity = 26/32 (81.25%), Postives = 28/32 (87.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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