Sed0008097 (gene) Chayote v1

Overview


Name	Sed0008097
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Anaphase-promoting complex subunit 11
Location	LG07: 43164322 .. 43166509 (-)
RNA-Seq Expression	Sed0008097
Synteny	Sed0008097

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGTAAAAATTTTGCGTATCCATTGTATATCTGTTTACCTGTCCATTCTCTATATTTCTGCTGCTATATTGATGTGCTCTGTAGTTCCTTGTTCTTTATTCAAAGAACAAGATTTCTCTCTATTGGGCTTTTGGTTTTTTTGCACCTTGAGGTCACAGGAAAAATGGATAAAAAATACCAATAGGGAGACGTTGGATGTCGTTATCCTTATTGATCTGGTGGGTTTTTTTCGTTGTGTCCCAGTTCGTTGAGATGTTCAGAGTTGGGCCCTAATCCTGATGAGTGGTTTTCTTATCTCTTTTTTCTCCCCTGTTGTATGTCTTTTTTTTTTTTCTTCATTGAGAGATTCAGTTTTTTATTCACCGTGAAAGGTGGAAATTCCGAAAAAATTCTAAGTTTTTTCATCTTTATGGTTATTCATAGTAAGGTTTATACATTTGATAGGGTTATGAGAAAAGCCATCCCTTTTGTAGGTCTACATGTATCTTGTGTAGAACAGCGGTCTCCTACCACAGTTCAACTTGAGTTAGTGTCAACCATGTTCCACAAAACTTGCTTCATTAAGCAGCTCCTTTTCTGAAGCAAGTCAAATATTTTTGTTGGAAATGCTTAGCCTCAGTGTTTCATAAAAACTTGGCTAGGAAAAAGCCACAAAATCTTCAGGGAAGCATTGCAACATTAATGAAGTTTGGATATTAGTCACTTCAGATCTTTTACTTTGTGCTCCTCTATTACTTTTTTTGTATATTTAGATATCTTTTTTTCCACTGAAGAATTTTCTCTATTCTCCTCGACTTATTTGGGCTGATATCTTATCATGTGCTTTTGTATCTCCTTTTTCTCACCATTCTGGATCAAATATAAAATGCCCATTCCAATTAAGTGCATGTTACGGTATCTCTGTTGGCTGTTTCTTAATATTTTGTCTGCATCAACACATTAAAAGTGGTATCTTTTAATCAACTGGATATGCTATTAGAATTTCCTTAACCCAGATACCCTCTGCTAACATGTGTTTTGGGTCCAAAAAGAGTAAGTTCCTTTTCTCTATTCTTATAGTTGCTTCTGTTAAGTGTAATTAGATTAACCAACCAATTACTTATCGTAGTATAATTTCATCCCTTGTGTAAAATATAGGTGGCATGCTGTTGCATCATGGACTTGGAATGCTCAAGATGAAACATGTGGAATTTGTAGGATGGCTTTTGATGGTTGTTGCCCTGATTGCAAACTTCCTGGAGATGATTGCCCATTGAGTGAGTCAACTAGCCTTGTCTTCCTTTTCTCAGTTTCTCTTGCCATCAATTATTGCACCTCACAGTTTAGCACAAATAATTGGTAAGCTTAGGATCATGTGTATGTGTGTGTACAACTCACATACATTCGAAAGTAACCTCGAAATACTATCTAATTGCTTCTATATAGATAAAAACAACTCACATACATGCAAGTGAGCTCGAAATTCCATTTAACTGGTTCTCTAGTTAAAAAGAAAATGAAGGTTCCGCTGTGTTTAAGTACATTCCAGCTTGATCAAACCATATTTTGTTAGTTCATATTTTCTTTAAAACGTTTCTTTTTTTTGAATTAGGGTCCTTAAAACGTTTCTTTTTCTTTGAATTTGGGTGCTGGGGCAAGTAGAATGGGAATTGATTACAGGGAAAGATGAGAATACGAGAGAAAATGATAATCAAAGAAAATGACTATCTGTGTTTAGAGCGAAGAAAATGATTATAGTGAAAATGATTATCTGTGTTTGGGTGCAGAAAATGATTATTTGTGATTTGGTGTAGAAAATAATTATAGGAAAATGATTGTTTGTGTTTGGGATGAGAAACATAATTATTAGGAGAAAAAAATAGTAAATATTGTGAGAATGAGAATTGAGAAGTAGTTAGTGAAGGATGAAAACTGGTTCCGGAGAAGAGCTTATGGAGAGAATGAATATTGATTATGAGGGAATGATTATAGATGGCTGAAACATGGATACGAAAATTATTCCCATTTTTTTGGTCCAAACACTTTTAAATGGTAATGGCCTCTTATTCAGTTTTTGTTTTAAATGCAGTTTGGGGTGCATGCAACCATGCTTTTCATCTTCATTGCATCCTCAAATGGGTGAATTCACAGACATCTCAAGCACATTGCCCCATGTGCCGTAGAGAATGGCAATTCAAGGAGTGA

mRNA sequence

ATGAAAGTAAAAATTTTGCGTATCCATTGTATATCTGTTTACCTGTGGCATGCTGTTGCATCATGGACTTGGAATGCTCAAGATGAAACATGTGGAATTTGTAGGATGGCTTTTGATGGTTGTTGCCCTGATTGCAAACTTCCTGGAGATGATTGCCCATTGATTTGGGGTGCATGCAACCATGCTTTTCATCTTCATTGCATCCTCAAATGGGTGAATTCACAGACATCTCAAGCACATTGCCCCATGTGCCGTAGAGAATGGCAATTCAAGGAGTGA

Coding sequence (CDS)

ATGAAAGTAAAAATTTTGCGTATCCATTGTATATCTGTTTACCTGTGGCATGCTGTTGCATCATGGACTTGGAATGCTCAAGATGAAACATGTGGAATTTGTAGGATGGCTTTTGATGGTTGTTGCCCTGATTGCAAACTTCCTGGAGATGATTGCCCATTGATTTGGGGTGCATGCAACCATGCTTTTCATCTTCATTGCATCCTCAAATGGGTGAATTCACAGACATCTCAAGCACATTGCCCCATGTGCCGTAGAGAATGGCAATTCAAGGAGTGA

Protein sequence

MKVKILRIHCISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE

Homology

[Close]

BLAST of Sed0008097 vs. NCBI nr
Match: KAF5463601.1 (hypothetical protein F2P56_013763 [Juglans regia] >KAF5464089.1 hypothetical protein F2P56_014198 [Juglans regia])

HSP 1 Score: 197.6 bits (501), Expect = 4.7e-47
Identity = 84/92 (91.30%), Postives = 87/92 (94.57%), Query Frame = 0


Query: 1   MKVKILRIHCISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACN 60
           MKVK+LRI    + LWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACN
Sbjct: 21  MKVKLLRI--FPMILWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACN 80

Query: 61  HAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 93
           HAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
Sbjct: 81  HAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 110

[Close]

BLAST of Sed0008097 vs. NCBI nr
Match: XP_035547560.1 (anaphase-promoting complex subunit 11 isoform X8 [Juglans regia] >XP_035547561.1 anaphase-promoting complex subunit 11 isoform X8 [Juglans regia] >XP_035547677.1 anaphase-promoting complex subunit 11 isoform X8 [Juglans regia] >XP_035547678.1 anaphase-promoting complex subunit 11 isoform X8 [Juglans regia] >XP_040994227.1 anaphase-promoting complex subunit 11 isoform X9 [Juglans microcarpa x Juglans regia] >XP_040994231.1 anaphase-promoting complex subunit 11 isoform X9 [Juglans microcarpa x Juglans regia])

HSP 1 Score: 197.6 bits (501), Expect = 4.7e-47
Identity = 84/92 (91.30%), Postives = 87/92 (94.57%), Query Frame = 0


Query: 1  MKVKILRIHCISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACN 60
          MKVK+LRI    + LWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACN
Sbjct: 1  MKVKLLRI--FPMILWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACN 60

Query: 61 HAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 93
          HAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
Sbjct: 61 HAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 90

[Close]

BLAST of Sed0008097 vs. NCBI nr
Match: NP_001189819.1 (anaphase-promoting complex/cyclosome 11 [Arabidopsis thaliana] >NP_001325492.1 anaphase-promoting complex/cyclosome 11 [Arabidopsis thaliana] >NP_187238.2 anaphase-promoting complex/cyclosome 11 [Arabidopsis thaliana] >EFH39874.1 anaphase promoting complex subunit 11 [Arabidopsis lyrata subsp. lyrata] >AEE74309.1 anaphase-promoting complex/cyclosome 11 [Arabidopsis thaliana] >AEE74310.1 anaphase-promoting complex/cyclosome 11 [Arabidopsis thaliana] >ANM63402.1 anaphase-promoting complex/cyclosome 11 [Arabidopsis thaliana])

HSP 1 Score: 197.2 bits (500), Expect = 6.2e-47
Identity = 85/92 (92.39%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 1  MKVKILRIHCISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACN 60
          MKVKILRI      LWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACN
Sbjct: 1  MKVKILRI-----LLWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACN 60

Query: 61 HAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 93
          HAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
Sbjct: 61 HAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 87

[Close]

BLAST of Sed0008097 vs. NCBI nr
Match: XP_035547557.1 (anaphase-promoting complex subunit 11 isoform X7 [Juglans regia] >XP_035547558.1 anaphase-promoting complex subunit 11 isoform X7 [Juglans regia] >XP_035547559.1 anaphase-promoting complex subunit 11 isoform X7 [Juglans regia] >XP_035547674.1 anaphase-promoting complex subunit 11 isoform X7 [Juglans regia] >XP_035547675.1 anaphase-promoting complex subunit 11 isoform X7 [Juglans regia] >XP_035547676.1 anaphase-promoting complex subunit 11 isoform X7 [Juglans regia] >XP_040994217.1 anaphase-promoting complex subunit 11 isoform X8 [Juglans microcarpa x Juglans regia] >XP_040994221.1 anaphase-promoting complex subunit 11 isoform X8 [Juglans microcarpa x Juglans regia])

HSP 1 Score: 196.4 bits (498), Expect = 1.1e-46
Identity = 84/93 (90.32%), Postives = 87/93 (93.55%), Query Frame = 0


Query: 1  MKVKILRIHCIS-VYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGAC 60
          MKVK+LR    S +Y WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGAC
Sbjct: 1  MKVKLLRGEARSQLYWWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGAC 60

Query: 61 NHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 93
          NHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
Sbjct: 61 NHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 93

[Close]

BLAST of Sed0008097 vs. NCBI nr
Match: KAF5463602.1 (hypothetical protein F2P56_013763 [Juglans regia] >KAF5464091.1 hypothetical protein F2P56_014198 [Juglans regia])

HSP 1 Score: 196.4 bits (498), Expect = 1.1e-46
Identity = 84/93 (90.32%), Postives = 87/93 (93.55%), Query Frame = 0


Query: 1   MKVKILRIHCIS-VYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGAC 60
           MKVK+LR    S +Y WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGAC
Sbjct: 21  MKVKLLRGEARSQLYWWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGAC 80

Query: 61  NHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 93
           NHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
Sbjct: 81  NHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 113

[Close]

BLAST of Sed0008097 vs. ExPASy Swiss-Prot
Match: Q9M9L0 (Anaphase-promoting complex subunit 11 OS=Arabidopsis thaliana OX=3702 GN=APC11 PE=1 SV=3)

HSP 1 Score: 192.2 bits (487), Expect = 2.6e-48
Identity = 82/92 (89.13%), Postives = 84/92 (91.30%), Query Frame = 0


Query: 1  MKVKILRIHCISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACN 60
          MKVKIL+        WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACN
Sbjct: 1  MKVKILQ--------WHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACN 60

Query: 61 HAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 93
          HAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
Sbjct: 61 HAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 84

[Close]

BLAST of Sed0008097 vs. ExPASy Swiss-Prot
Match: Q3ZCF6 (Anaphase-promoting complex subunit 11 OS=Bos taurus OX=9913 GN=ANAPC11 PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 3.5e-37
Identity = 56/82 (68.29%), Postives = 69/82 (84.15%), Query Frame = 0


Query: 11 ISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILK 70
          + +  W+ VA+W W A DE CGICRMAF+GCCPDCK+PGDDCPL+WG C+H FH+HCILK
Sbjct: 3  VKIKCWNGVATWLWVANDENCGICRMAFNGCCPDCKVPGDDCPLVWGQCSHCFHMHCILK 62

Query: 71 WVNSQTSQAHCPMCRREWQFKE 93
          W+N+Q  Q HCPMCR+EW+FKE
Sbjct: 63 WLNAQQVQQHCPMCRQEWKFKE 84

[Close]

BLAST of Sed0008097 vs. ExPASy Swiss-Prot
Match: Q9CPX9 (Anaphase-promoting complex subunit 11 OS=Mus musculus OX=10090 GN=Anapc11 PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 3.5e-37
Identity = 56/82 (68.29%), Postives = 69/82 (84.15%), Query Frame = 0


Query: 11 ISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILK 70
          + +  W+ VA+W W A DE CGICRMAF+GCCPDCK+PGDDCPL+WG C+H FH+HCILK
Sbjct: 3  VKIKCWNGVATWLWVANDENCGICRMAFNGCCPDCKVPGDDCPLVWGQCSHCFHMHCILK 62

Query: 71 WVNSQTSQAHCPMCRREWQFKE 93
          W+N+Q  Q HCPMCR+EW+FKE
Sbjct: 63 WLNAQQVQQHCPMCRQEWKFKE 84

[Close]

BLAST of Sed0008097 vs. ExPASy Swiss-Prot
Match: Q9NYG5 (Anaphase-promoting complex subunit 11 OS=Homo sapiens OX=9606 GN=ANAPC11 PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 1.3e-36
Identity = 55/82 (67.07%), Postives = 69/82 (84.15%), Query Frame = 0


Query: 11 ISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILK 70
          + +  W+ VA+W W A DE CGICRMAF+GCCPDCK+PGDDCPL+WG C+H FH+HCILK
Sbjct: 3  VKIKCWNGVATWLWVANDENCGICRMAFNGCCPDCKVPGDDCPLVWGQCSHCFHMHCILK 62

Query: 71 WVNSQTSQAHCPMCRREWQFKE 93
          W+++Q  Q HCPMCR+EW+FKE
Sbjct: 63 WLHAQQVQQHCPMCRQEWKFKE 84

[Close]

BLAST of Sed0008097 vs. ExPASy Swiss-Prot
Match: Q5R8A2 (Anaphase-promoting complex subunit 11 OS=Pongo abelii OX=9601 GN=ANAPC11 PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 1.3e-36
Identity = 55/82 (67.07%), Postives = 69/82 (84.15%), Query Frame = 0


Query: 11 ISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILK 70
          + +  W+ VA+W W A DE CGICRMAF+GCCPDCK+PGDDCPL+WG C+H FH+HCILK
Sbjct: 3  VKIKCWNGVATWLWVANDENCGICRMAFNGCCPDCKVPGDDCPLVWGQCSHCFHMHCILK 62

Query: 71 WVNSQTSQAHCPMCRREWQFKE 93
          W+++Q  Q HCPMCR+EW+FKE
Sbjct: 63 WLHAQQVQQHCPMCRQEWKFKE 84

[Close]

BLAST of Sed0008097 vs. ExPASy TrEMBL
Match: A0A2I4HDV5 (Anaphase-promoting complex subunit 11 OS=Juglans regia OX=51240 GN=LOC109016305 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 2.3e-47
Identity = 84/92 (91.30%), Postives = 87/92 (94.57%), Query Frame = 0


Query: 1  MKVKILRIHCISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACN 60
          MKVK+LRI    + LWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACN
Sbjct: 1  MKVKLLRI--FPMILWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACN 60

Query: 61 HAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 93
          HAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
Sbjct: 61 HAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 90

[Close]

BLAST of Sed0008097 vs. ExPASy TrEMBL
Match: D7MN37 (Anaphase-promoting complex subunit 11 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_330997 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 3.0e-47
Identity = 85/92 (92.39%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 1  MKVKILRIHCISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACN 60
          MKVKILRI      LWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACN
Sbjct: 1  MKVKILRI-----LLWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACN 60

Query: 61 HAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 93
          HAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
Sbjct: 61 HAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 87

[Close]

BLAST of Sed0008097 vs. ExPASy TrEMBL
Match: A0A1I9LLE4 (Anaphase-promoting complex subunit 11 OS=Arabidopsis thaliana OX=3702 GN=APC11 PE=1 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 3.0e-47
Identity = 85/92 (92.39%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 1  MKVKILRIHCISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACN 60
          MKVKILRI      LWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACN
Sbjct: 1  MKVKILRI-----LLWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACN 60

Query: 61 HAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 93
          HAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
Sbjct: 61 HAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 87

[Close]

BLAST of Sed0008097 vs. ExPASy TrEMBL
Match: A0A2I4HDN9 (Anaphase-promoting complex subunit 11 OS=Juglans regia OX=51240 GN=LOC109016305 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 5.1e-47
Identity = 84/93 (90.32%), Postives = 87/93 (93.55%), Query Frame = 0


Query: 1  MKVKILRIHCIS-VYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGAC 60
          MKVK+LR    S +Y WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGAC
Sbjct: 1  MKVKLLRGEARSQLYWWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGAC 60

Query: 61 NHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 93
          NHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
Sbjct: 61 NHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 93

[Close]

BLAST of Sed0008097 vs. ExPASy TrEMBL
Match: A0A2I4HJW5 (Anaphase-promoting complex subunit 11 OS=Juglans regia OX=51240 GN=LOC109005258 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.1e-46
Identity = 85/97 (87.63%), Postives = 90/97 (92.78%), Query Frame = 0


Query: 1  MKVKILRIHCI----SVYL-WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLI 60
          MKVK+LRI  +    S+Y+ WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLI
Sbjct: 1  MKVKLLRIFPMILVRSLYISWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLI 60

Query: 61 WGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 93
          WGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
Sbjct: 61 WGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 97

[Close]

BLAST of Sed0008097 vs. TAIR 10
Match: AT3G05870.1 (anaphase-promoting complex/cyclosome 11 )

HSP 1 Score: 197.2 bits (500), Expect = 5.7e-51
Identity = 85/92 (92.39%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 1  MKVKILRIHCISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACN 60
          MKVKILRI      LWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACN
Sbjct: 1  MKVKILRI-----LLWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACN 60

Query: 61 HAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 93
          HAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
Sbjct: 61 HAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 87

[Close]

BLAST of Sed0008097 vs. TAIR 10
Match: AT3G05870.2 (anaphase-promoting complex/cyclosome 11 )

HSP 1 Score: 197.2 bits (500), Expect = 5.7e-51
Identity = 85/92 (92.39%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 1  MKVKILRIHCISVYLWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACN 60
          MKVKILRI      LWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACN
Sbjct: 1  MKVKILRI-----LLWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACN 60

Query: 61 HAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 93
          HAFHLHCILKWVNSQTSQAHCPMCRREWQFKE
Sbjct: 61 HAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 87

[Close]

BLAST of Sed0008097 vs. TAIR 10
Match: AT5G20570.1 (RING-box 1 )

HSP 1 Score: 77.0 bits (188), Expect = 8.7e-15
Identity = 32/82 (39.02%), Postives = 46/82 (56.10%), Query Frame = 0


Query: 16  WHAVASWTWNAQDETCGICRMAFDGCCPDCK-----LPGDDCPLIWGACNHAFHLHCILK 75
           W AVA W W+   + C ICR      C +C+        ++C + WG CNHAFH HCI +
Sbjct: 37  WSAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISR 96

Query: 76  WVNSQTSQAHCPMCRREWQFKE 93
           W+  +T Q  CP+   EW+F++
Sbjct: 97  WL--KTRQV-CPLDNSEWEFQK 115

[Close]

BLAST of Sed0008097 vs. TAIR 10
Match: AT3G42830.1 (RING/U-box superfamily protein )

HSP 1 Score: 74.7 bits (182), Expect = 4.3e-14
Identity = 32/82 (39.02%), Postives = 45/82 (54.88%), Query Frame = 0


Query: 16  WHAVASWTWNAQDETCGICRMAFDGCCPDC-----KLPGDDCPLIWGACNHAFHLHCILK 75
           W AVA W W+   + C ICR      C +C         ++C + WG CNHAFH HCI +
Sbjct: 34  WSAVALWAWDIVVDNCAICRNHIMDLCIECLANQASATSEECTVAWGVCNHAFHFHCISR 93

Query: 76  WVNSQTSQAHCPMCRREWQFKE 93
           W+  +T Q  CP+   EW+F++
Sbjct: 94  WL--KTRQV-CPLDVCEWEFQK 112

[Close]

BLAST of Sed0008097 vs. TAIR 10
Match: AT5G26640.1 (BEST Arabidopsis thaliana protein match is: anaphase-promoting complex/cyclosome 11 (TAIR:AT3G05870.2); Has 293 Blast hits to 293 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 128; Fungi - 102; Plants - 41; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). )

HSP 1 Score: 68.9 bits (167), Expect = 2.4e-12
Identity = 26/32 (81.25%), Postives = 28/32 (87.50%), Query Frame = 0


Query: 23 TWNAQDETCGICRMAFDGCCPDCKLPGDDCPL 55
          TW+AQDETCG+CRM FD  CPDCKLP DDCPL
Sbjct: 5  TWDAQDETCGLCRMPFDASCPDCKLPEDDCPL 36

The following BLAST results are available for this feature:

BLAST of Sed0008097 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF5463601.1	4.7e-47	91.30	hypothetical protein F2P56_013763 [Juglans regia] >KAF5464089.1 hypothetical pro...	[more]
XP_035547560.1	4.7e-47	91.30	anaphase-promoting complex subunit 11 isoform X8 [Juglans regia] >XP_035547561.1...	[more]
NP_001189819.1	6.2e-47	92.39	anaphase-promoting complex/cyclosome 11 [Arabidopsis thaliana] >NP_001325492.1 a...	[more]
XP_035547557.1	1.1e-46	90.32	anaphase-promoting complex subunit 11 isoform X7 [Juglans regia] >XP_035547558.1...	[more]
KAF5463602.1	1.1e-46	90.32	hypothetical protein F2P56_013763 [Juglans regia] >KAF5464091.1 hypothetical pro...	[more]

BLAST of Sed0008097 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M9L0	2.6e-48	89.13	Anaphase-promoting complex subunit 11 OS=Arabidopsis thaliana OX=3702 GN=APC11 P...	[more]
Q3ZCF6	3.5e-37	68.29	Anaphase-promoting complex subunit 11 OS=Bos taurus OX=9913 GN=ANAPC11 PE=3 SV=1	[more]
Q9CPX9	3.5e-37	68.29	Anaphase-promoting complex subunit 11 OS=Mus musculus OX=10090 GN=Anapc11 PE=3 S...	[more]
Q9NYG5	1.3e-36	67.07	Anaphase-promoting complex subunit 11 OS=Homo sapiens OX=9606 GN=ANAPC11 PE=1 SV...	[more]
Q5R8A2	1.3e-36	67.07	Anaphase-promoting complex subunit 11 OS=Pongo abelii OX=9601 GN=ANAPC11 PE=3 SV...	[more]

BLAST of Sed0008097 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2I4HDV5	2.3e-47	91.30	Anaphase-promoting complex subunit 11 OS=Juglans regia OX=51240 GN=LOC109016305 ...	[more]
D7MN37	3.0e-47	92.39	Anaphase-promoting complex subunit 11 OS=Arabidopsis lyrata subsp. lyrata OX=819...	[more]
A0A1I9LLE4	3.0e-47	92.39	Anaphase-promoting complex subunit 11 OS=Arabidopsis thaliana OX=3702 GN=APC11 P...	[more]
A0A2I4HDN9	5.1e-47	90.32	Anaphase-promoting complex subunit 11 OS=Juglans regia OX=51240 GN=LOC109016305 ...	[more]
A0A2I4HJW5	1.1e-46	87.63	Anaphase-promoting complex subunit 11 OS=Juglans regia OX=51240 GN=LOC109005258 ...	[more]

BLAST of Sed0008097 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05870.1	5.7e-51	92.39	anaphase-promoting complex/cyclosome 11	[more]
AT3G05870.2	5.7e-51	92.39	anaphase-promoting complex/cyclosome 11	[more]
AT5G20570.1	8.7e-15	39.02	RING-box 1	[more]
AT3G42830.1	4.3e-14	39.02	RING/U-box superfamily protein	[more]
AT5G26640.1	2.4e-12	81.25	BEST Arabidopsis thaliana protein match is: anaphase-promoting complex/cyclosome...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024991	Anaphase-promoting complex subunit 11, RING-H2 finger	PFAM	PF12861	zf-ANAPC11	coord: 12..92 e-value: 4.8E-38 score: 129.1
IPR024991	Anaphase-promoting complex subunit 11, RING-H2 finger	CDD	cd16456	RING-H2_APC11	coord: 28..90 e-value: 2.11944E-37 score: 118.144
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 5..92 e-value: 2.2E-26 score: 93.9
None	No IPR available	PANTHER	PTHR11210	RING BOX	coord: 12..92
None	No IPR available	PANTHER	PTHR11210:SF1	ANAPHASE-PROMOTING COMPLEX SUBUNIT 11	coord: 12..92
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 11..91
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 42..85 score: 10.984472

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0008097.1	Sed0008097.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031145	anaphase-promoting complex-dependent catabolic process
biological_process	GO:0051301	cell division
biological_process	GO:0045842	positive regulation of mitotic metaphase/anaphase transition
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005680	anaphase-promoting complex
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0097602	cullin family protein binding
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0008270	zinc ion binding