
Sed0007765 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACTGCAATCTGGAGCAAATCTTTGATGGGGAAGTTTTAGATGCATTTTATAGATTCAAGAGAGAATTAAATAAAATTGAAGTCAATATTAAGAGAAGAAACGAAAATCACAATTTGAAAAATCGAGTTGGAGCTGTGAAGATACCATACACTTTGCTACATCCCACCAGCACAAAAGGCATTACATGTAAAGGAATTCCCAATAGCATTTCTATTTGA ATGGACTGCAATCTGGAGCAAATCTTTGATGGGGAAGTTTTAGATGCATTTTATAGATTCAAGAGAGAATTAAATAAAATTGAAGTCAATATTAAGAGAAGAAACGAAAATCACAATTTGAAAAATCGAGTTGGAGCTGTGAAGATACCATACACTTTGCTACATCCCACCAGCACAAAAGGCATTACATGTAAAGGAATTCCCAATAGCATTTCTATTTGA ATGGACTGCAATCTGGAGCAAATCTTTGATGGGGAAGTTTTAGATGCATTTTATAGATTCAAGAGAGAATTAAATAAAATTGAAGTCAATATTAAGAGAAGAAACGAAAATCACAATTTGAAAAATCGAGTTGGAGCTGTGAAGATACCATACACTTTGCTACATCCCACCAGCACAAAAGGCATTACATGTAAAGGAATTCCCAATAGCATTTCTATTTGA MDCNLEQIFDGEVLDAFYRFKRELNKIEVNIKRRNENHNLKNRVGAVKIPYTLLHPTSTKGITCKGIPNSISI Homology
BLAST of Sed0007765 vs. NCBI nr
Match: PRQ42206.1 (putative linoleate 9S-lipoxygenase [Rosa chinensis]) HSP 1 Score: 87.4 bits (215), Expect = 5.5e-14 Identity = 45/70 (64.29%), Postives = 57/70 (81.43%), Query Frame = 0
BLAST of Sed0007765 vs. NCBI nr
Match: XP_024189367.2 (probable linoleate 9S-lipoxygenase 5 [Rosa chinensis]) HSP 1 Score: 87.4 bits (215), Expect = 5.5e-14 Identity = 45/70 (64.29%), Postives = 57/70 (81.43%), Query Frame = 0
BLAST of Sed0007765 vs. NCBI nr
Match: KAF4368418.1 (hypothetical protein G4B88_025480 [Cannabis sativa]) HSP 1 Score: 84.3 bits (207), Expect = 4.6e-13 Identity = 42/64 (65.62%), Postives = 49/64 (76.56%), Query Frame = 0
BLAST of Sed0007765 vs. NCBI nr
Match: XP_030506245.1 (probable linoleate 9S-lipoxygenase 5 isoform X2 [Cannabis sativa]) HSP 1 Score: 84.0 bits (206), Expect = 6.0e-13 Identity = 41/64 (64.06%), Postives = 49/64 (76.56%), Query Frame = 0
BLAST of Sed0007765 vs. NCBI nr
Match: XP_030506244.1 (probable linoleate 9S-lipoxygenase 5 isoform X1 [Cannabis sativa]) HSP 1 Score: 84.0 bits (206), Expect = 6.0e-13 Identity = 41/64 (64.06%), Postives = 49/64 (76.56%), Query Frame = 0
BLAST of Sed0007765 vs. ExPASy Swiss-Prot
Match: O24371 (Linoleate 13S-lipoxygenase 3-1, chloroplastic OS=Solanum tuberosum OX=4113 GN=LOX3.1 PE=1 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 1.7e-13 Identity = 34/64 (53.12%), Postives = 46/64 (71.88%), Query Frame = 0
BLAST of Sed0007765 vs. ExPASy Swiss-Prot
Match: R9WTS6 (Lipoxygenase 1, chloroplastic OS=Tanacetum cinerariifolium OX=118510 GN=LOX1 PE=1 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 6.3e-13 Identity = 34/64 (53.12%), Postives = 47/64 (73.44%), Query Frame = 0
BLAST of Sed0007765 vs. ExPASy Swiss-Prot
Match: P38414 (Linoleate 9S-lipoxygenase OS=Lens culinaris OX=3864 GN=LOX1.1 PE=2 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 1.8e-12 Identity = 33/59 (55.93%), Postives = 48/59 (81.36%), Query Frame = 0
BLAST of Sed0007765 vs. ExPASy Swiss-Prot
Match: P09439 (Seed linoleate 9S-lipoxygenase-2 OS=Glycine max OX=3847 GN=LOX1.2 PE=2 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 1.8e-12 Identity = 34/64 (53.12%), Postives = 48/64 (75.00%), Query Frame = 0
BLAST of Sed0007765 vs. ExPASy Swiss-Prot
Match: Q9FNX8 (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LOX4 PE=2 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 3.1e-12 Identity = 31/64 (48.44%), Postives = 46/64 (71.88%), Query Frame = 0
BLAST of Sed0007765 vs. ExPASy TrEMBL
Match: A0A2P6R6Y4 (Lipoxygenase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0455091 PE=3 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 2.6e-14 Identity = 45/70 (64.29%), Postives = 57/70 (81.43%), Query Frame = 0
BLAST of Sed0007765 vs. ExPASy TrEMBL
Match: A0A7J6FCS8 (Lipoxygenase OS=Cannabis sativa OX=3483 GN=G4B88_025480 PE=3 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 2.2e-13 Identity = 42/64 (65.62%), Postives = 49/64 (76.56%), Query Frame = 0
BLAST of Sed0007765 vs. ExPASy TrEMBL
Match: A0A7J6FIJ4 (Lipoxygenase OS=Cannabis sativa OX=3483 GN=F8388_015786 PE=3 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 2.9e-13 Identity = 41/64 (64.06%), Postives = 49/64 (76.56%), Query Frame = 0
BLAST of Sed0007765 vs. ExPASy TrEMBL
Match: A0A7J6E8V3 (Lipoxygenase OS=Cannabis sativa OX=3483 GN=G4B88_009409 PE=3 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 2.9e-13 Identity = 41/64 (64.06%), Postives = 49/64 (76.56%), Query Frame = 0
BLAST of Sed0007765 vs. ExPASy TrEMBL
Match: A0A803PSW5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 2.9e-13 Identity = 41/64 (64.06%), Postives = 49/64 (76.56%), Query Frame = 0
BLAST of Sed0007765 vs. TAIR 10
Match: AT1G72520.1 (PLAT/LH2 domain-containing lipoxygenase family protein ) HSP 1 Score: 72.0 bits (175), Expect = 2.2e-13 Identity = 31/64 (48.44%), Postives = 46/64 (71.88%), Query Frame = 0
BLAST of Sed0007765 vs. TAIR 10
Match: AT1G55020.1 (lipoxygenase 1 ) HSP 1 Score: 71.6 bits (174), Expect = 2.9e-13 Identity = 34/62 (54.84%), Postives = 46/62 (74.19%), Query Frame = 0
BLAST of Sed0007765 vs. TAIR 10
Match: AT3G22400.1 (PLAT/LH2 domain-containing lipoxygenase family protein ) HSP 1 Score: 71.6 bits (174), Expect = 2.9e-13 Identity = 40/69 (57.97%), Postives = 46/69 (66.67%), Query Frame = 0
BLAST of Sed0007765 vs. TAIR 10
Match: AT1G17420.1 (lipoxygenase 3 ) HSP 1 Score: 70.9 bits (172), Expect = 4.9e-13 Identity = 31/64 (48.44%), Postives = 47/64 (73.44%), Query Frame = 0
BLAST of Sed0007765 vs. TAIR 10
Match: AT1G67560.1 (PLAT/LH2 domain-containing lipoxygenase family protein ) HSP 1 Score: 65.1 bits (157), Expect = 2.7e-11 Identity = 35/64 (54.69%), Postives = 42/64 (65.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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