Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTAGATTGTCTTCTTTGTTCGCAAACCCTAATTTTTAATTTCTCTGCAACTTTTCCCAAACCCTAAAATCCTTCAAAACCTTCAAAAACCCCTTTTTTTTCATTCACCATCGAATCTGAATCTCTTCGATTCTTATCCGTTTAGGGTTTTCTGTGTTTCCCTTTTTCAATGAATGCGCGCCCTAATCTTCCTCCTCCGCCGCCGTCGTCGATTCCGCCGACGAGCAAATCGCCGACGGAATGTTGCAATTGCGGCAATCACAATTGCTGGGTTCTGCACAATATCCGTTTGCGAGCCGCCAATCGCCGCCTCTGCACATCGTGCGTTCTTCGTCTTCATCCTGCTTCGTTTTGCCCTTCTTGTTTTCAGTTTTACGATCCCTCTGTTTCTCCTCACCCTTCCAATCGCTTAGCTTGTGTTAAGTGTTCTTCCATTACGCATTCCCACTGTGTGGTCAACTCTGCTAGTTCTTCTTCTTCTTCTTCCGATCCTCAGATGTTGTCTTCCTCTTATCTCTGCCCTCCCTGCGCCAATCCCAATTTCTGCTTCTTCGAATTGGACTCCGGTCCTCGGGGTTCTACTGTGACTGTTGATAGGAAGATTTCTGTTGTGTTGCTCTGTGCGGCGAAGATTGCTTCTGCGTCGATGGCGAAGGCGCTGGCTCTGGCGCGGGCGGATGCCGATAGGAAGGTTCGGGAGGCGGCCGTGGCGAAGAAGAGGGCTAGAGAAGCTATTGAGCATGTTGGGTTTGTGATGGCTAGAGAAAGGGCTAGGCGTATGGAGGAGGAGGCGGCGGCTATGGAGGTTTCGGGTTCTGGGAGTGTTGGGGTTAAGGAGAATGAGAGGAATAGGAATGTGGGTTCTATGGTGAAAGTTGAGAATTCTGTTGAGGCCCCTGTTGTGCCATGTTTAAATGCTGGTTGTAGTAGTAGTGGGTTGTCTCAGAGAAGGGAGAGCTTGAATGGGTTTGTGAGACAGATTTCTATGGTGAAGAATGAGGGAGCTGTTTCCATGGAAGAAGATGTGAGGCAGAAAAATGTTGAGGCTGATCGGTTACAGAGGAACAATAACATTGCTGATAATGGGAATGACAATGGGGAAGTTGAGAATGTGCAAAATGATCATATTGGAGGAAATGTTAATACCACAAGTTAGCTTTTTGAAGTTGTTCTCATGGCATCATTATATCCTTGGTCTTTTGCTAAATGAAAAGTATGGAAATTTATTCAGTTATTTTTCTTGGTCTTTAGGAATTAATTCATGTTGTGAGGATAGCACAATGCCTGTGAGTTTTTCCAGATATTCCTTGTTGAGATTTGGCTAGTTTAGAGTTTATCCGAATTCTCATTTTAAGGTCCTTGCATGGTGTAATGGTGTAAAAAATGTAGATTAATTGAAGTTTAACATTATTTTGTGTACCTGTCACACTGTTACTTTGCAC
mRNA sequence
ATTAGATTGTCTTCTTTGTTCGCAAACCCTAATTTTTAATTTCTCTGCAACTTTTCCCAAACCCTAAAATCCTTCAAAACCTTCAAAAACCCCTTTTTTTTCATTCACCATCGAATCTGAATCTCTTCGATTCTTATCCGTTTAGGGTTTTCTGTGTTTCCCTTTTTCAATGAATGCGCGCCCTAATCTTCCTCCTCCGCCGCCGTCGTCGATTCCGCCGACGAGCAAATCGCCGACGGAATGTTGCAATTGCGGCAATCACAATTGCTGGGTTCTGCACAATATCCGTTTGCGAGCCGCCAATCGCCGCCTCTGCACATCGTGCGTTCTTCGTCTTCATCCTGCTTCGTTTTGCCCTTCTTGTTTTCAGTTTTACGATCCCTCTGTTTCTCCTCACCCTTCCAATCGCTTAGCTTGTGTTAAGTGTTCTTCCATTACGCATTCCCACTGTGTGGTCAACTCTGCTAGTTCTTCTTCTTCTTCTTCCGATCCTCAGATGTTGTCTTCCTCTTATCTCTGCCCTCCCTGCGCCAATCCCAATTTCTGCTTCTTCGAATTGGACTCCGGTCCTCGGGGTTCTACTGTGACTGTTGATAGGAAGATTTCTGTTGTGTTGCTCTGTGCGGCGAAGATTGCTTCTGCGTCGATGGCGAAGGCGCTGGCTCTGGCGCGGGCGGATGCCGATAGGAAGGTTCGGGAGGCGGCCGTGGCGAAGAAGAGGGCTAGAGAAGCTATTGAGCATGTTGGGTTTGTGATGGCTAGAGAAAGGGCTAGGCGTATGGAGGAGGAGGCGGCGGCTATGGAGGTTTCGGGTTCTGGGAGTGTTGGGGTTAAGGAGAATGAGAGGAATAGGAATGTGGGTTCTATGGTGAAAGTTGAGAATTCTGTTGAGGCCCCTGTTGTGCCATGTTTAAATGCTGGTTGTAGTAGTAGTGGGTTGTCTCAGAGAAGGGAGAGCTTGAATGGGTTTGTGAGACAGATTTCTATGGTGAAGAATGAGGGAGCTGTTTCCATGGAAGAAGATGTGAGGCAGAAAAATGTTGAGGCTGATCGGTTACAGAGGAACAATAACATTGCTGATAATGGGAATGACAATGGGGAAGTTGAGAATGTGCAAAATGATCATATTGGAGGAAATGTTAATACCACAAGTTAGCTTTTTGAAGTTGTTCTCATGGCATCATTATATCCTTGGTCTTTTGCTAAATGAAAAGTATGGAAATTTATTCAGTTATTTTTCTTGGTCTTTAGGAATTAATTCATGTTGTGAGGATAGCACAATGCCTGTGAGTTTTTCCAGATATTCCTTGTTGAGATTTGGCTAGTTTAGAGTTTATCCGAATTCTCATTTTAAGGTCCTTGCATGGTGTAATGGTGTAAAAAATGTAGATTAATTGAAGTTTAACATTATTTTGTGTACCTGTCACACTGTTACTTTGCAC
Coding sequence (CDS)
ATGAATGCGCGCCCTAATCTTCCTCCTCCGCCGCCGTCGTCGATTCCGCCGACGAGCAAATCGCCGACGGAATGTTGCAATTGCGGCAATCACAATTGCTGGGTTCTGCACAATATCCGTTTGCGAGCCGCCAATCGCCGCCTCTGCACATCGTGCGTTCTTCGTCTTCATCCTGCTTCGTTTTGCCCTTCTTGTTTTCAGTTTTACGATCCCTCTGTTTCTCCTCACCCTTCCAATCGCTTAGCTTGTGTTAAGTGTTCTTCCATTACGCATTCCCACTGTGTGGTCAACTCTGCTAGTTCTTCTTCTTCTTCTTCCGATCCTCAGATGTTGTCTTCCTCTTATCTCTGCCCTCCCTGCGCCAATCCCAATTTCTGCTTCTTCGAATTGGACTCCGGTCCTCGGGGTTCTACTGTGACTGTTGATAGGAAGATTTCTGTTGTGTTGCTCTGTGCGGCGAAGATTGCTTCTGCGTCGATGGCGAAGGCGCTGGCTCTGGCGCGGGCGGATGCCGATAGGAAGGTTCGGGAGGCGGCCGTGGCGAAGAAGAGGGCTAGAGAAGCTATTGAGCATGTTGGGTTTGTGATGGCTAGAGAAAGGGCTAGGCGTATGGAGGAGGAGGCGGCGGCTATGGAGGTTTCGGGTTCTGGGAGTGTTGGGGTTAAGGAGAATGAGAGGAATAGGAATGTGGGTTCTATGGTGAAAGTTGAGAATTCTGTTGAGGCCCCTGTTGTGCCATGTTTAAATGCTGGTTGTAGTAGTAGTGGGTTGTCTCAGAGAAGGGAGAGCTTGAATGGGTTTGTGAGACAGATTTCTATGGTGAAGAATGAGGGAGCTGTTTCCATGGAAGAAGATGTGAGGCAGAAAAATGTTGAGGCTGATCGGTTACAGAGGAACAATAACATTGCTGATAATGGGAATGACAATGGGGAAGTTGAGAATGTGCAAAATGATCATATTGGAGGAAATGTTAATACCACAAGTTAG
Protein sequence
MNARPNLPPPPPSSIPPTSKSPTECCNCGNHNCWVLHNIRLRAANRRLCTSCVLRLHPASFCPSCFQFYDPSVSPHPSNRLACVKCSSITHSHCVVNSASSSSSSSDPQMLSSSYLCPPCANPNFCFFELDSGPRGSTVTVDRKISVVLLCAAKIASASMAKALALARADADRKVREAAVAKKRAREAIEHVGFVMARERARRMEEEAAAMEVSGSGSVGVKENERNRNVGSMVKVENSVEAPVVPCLNAGCSSSGLSQRRESLNGFVRQISMVKNEGAVSMEEDVRQKNVEADRLQRNNNIADNGNDNGEVENVQNDHIGGNVNTTS
Homology
BLAST of Sed0007403 vs. NCBI nr
Match:
XP_038878318.1 (uncharacterized protein LOC120070585 [Benincasa hispida])
HSP 1 Score: 406.4 bits (1043), Expect = 2.4e-109
Identity = 232/333 (69.67%), Postives = 265/333 (79.58%), Query Frame = 0
Query: 5 PNLPPPPPSSIPPTSKSPTECCNCGNHNCWVLHNIRLRAANRRLCTSCVLRLHPASFCPS 64
P+LPPPP + PPT K EC NCG+ W+LH++R+R NRRLCTSCVLRLHP+SFCPS
Sbjct: 4 PHLPPPPSTPNPPT-KMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFCPS 63
Query: 65 CFQFYDPSVSPHPSNRLACVKCSSITHSHCVVNSASSSSSSSDPQMLS---SSYLCPPCA 124
CFQFYD SVSPHP NR C KCSSITHSHCVVN A DPQ+LS SSYLCPPCA
Sbjct: 64 CFQFYDLSVSPHPVNRFTCSKCSSITHSHCVVNPA-----CPDPQLLSSTTSSYLCPPCA 123
Query: 125 NPNFCFFELDSGPRGSTVTVDRKISVVLLCAAKIASASMAKALALARADADRKVREAAVA 184
PNF FF+LDS PR S ++DRK +VVLLCAAKIASASM KA+ +ARADA+RKVREAA+A
Sbjct: 124 KPNFSFFDLDSKPRISPKSIDRKTAVVLLCAAKIASASMGKAVIVARADAERKVREAAMA 183
Query: 185 KKRAREAIEHVGFVMARERARRMEEEAAAMEVSGSGSVGVKENERNRNVGSMVKVENSVE 244
+KRAREA+EHVGF++ARERARR EE A+MEVSGSG++ +KENERNRN+GSMVKVEN E
Sbjct: 184 RKRAREALEHVGFLLARERARRKEE--ASMEVSGSGNLVMKENERNRNLGSMVKVENPFE 243
Query: 245 APVVPCLNAGCSSSGLSQRRESLNGFVRQISMVKNEGAVSMEEDVRQKNVEADRLQRNNN 304
P V LN + S L+QRRESLNGFVRQ+SMVKNE A SMEE VRQKNVEADRLQ NNN
Sbjct: 244 VPAVSTLNN--TGSALTQRRESLNGFVRQMSMVKNEVAASMEEAVRQKNVEADRLQSNNN 303
Query: 305 I-------ADNGNDNGEVENVQNDHIGGNVNTT 328
I + N N+NGEVE+VQ+D IGG VNTT
Sbjct: 304 IGLNEKEKSGNENENGEVEHVQHDRIGGIVNTT 326
BLAST of Sed0007403 vs. NCBI nr
Match:
XP_022155464.1 (uncharacterized protein LOC111022599 [Momordica charantia])
HSP 1 Score: 399.1 bits (1024), Expect = 3.8e-107
Identity = 227/344 (65.99%), Postives = 266/344 (77.33%), Query Frame = 0
Query: 8 PPPPPSSIP---------PTSKSPTECCNCGNHNCWVLHNIRLRAANRRLCTSCVLRLHP 67
PPPPPS +P P +K P+EC NCG+ + W+LH++RLR NRRLCTSCVLRLHP
Sbjct: 6 PPPPPSVVPAMVNNPNPNPPTKMPSECGNCGSQSRWMLHHVRLRGVNRRLCTSCVLRLHP 65
Query: 68 ASFCPSCFQFYDPSVSPH--PSNRLACVKCSSITHSHCVVNSASSSSSSSDPQML---SS 127
SFCPSCFQFYDPS SPH PSNR CVKCSSI+HSHCV+ S SSSDP L SS
Sbjct: 66 TSFCPSCFQFYDPSASPHPQPSNRFTCVKCSSISHSHCVL-----SPSSSDPHPLSSSSS 125
Query: 128 SYLCPPCANPNFCFFELDSGPRGSTVTVDRKISVVLLCAAKIASASMAKALALARADADR 187
SYLCPPCA PNF FF+LDS PR S ++DRK++VVLLCAAKIASASM KA+ +ARADA+R
Sbjct: 126 SYLCPPCAKPNFSFFDLDSKPRISDKSIDRKMAVVLLCAAKIASASMGKAVIVARADAER 185
Query: 188 KVREAAVAKKRAREAIEHVGFVMARERARRMEEEAAAMEVSGSGSVGVKENERNRNVGSM 247
KVREAA+A+KRAREA+EHVGFV+ARERARR EE A++EVSGSGS+G+KE ERNRN+GSM
Sbjct: 186 KVREAAIARKRAREALEHVGFVVARERARRKEE--ASVEVSGSGSIGIKEKERNRNLGSM 245
Query: 248 VKVENSVEAPVVPCLNAGCSSSGLSQRRESLNGFVRQISMVKNEGAVSMEEDVRQKNVEA 307
VK+ENS E V N +SS L+ RRESLNGFVRQ+SMVKN+ A S+EE +RQKNVEA
Sbjct: 246 VKMENSCEGSAVANSN---TSSALTHRRESLNGFVRQMSMVKNDVAASLEEALRQKNVEA 305
Query: 308 DRLQRNN-----------NIADNGNDNGEVENVQNDHIGGNVNT 327
DRLQ +N N D+G++NGEV+ V ND IGGNVNT
Sbjct: 306 DRLQSSNNNTLNEKEKSGNFGDSGHENGEVKRVHNDQIGGNVNT 339
BLAST of Sed0007403 vs. NCBI nr
Match:
XP_011659447.1 (uncharacterized protein LOC105436183 [Cucumis sativus] >KGN65987.1 hypothetical protein Csa_007541 [Cucumis sativus])
HSP 1 Score: 398.3 bits (1022), Expect = 6.5e-107
Identity = 228/332 (68.67%), Postives = 259/332 (78.01%), Query Frame = 0
Query: 5 PNLPPPPPSSIPPTSKSPTECCNCGNHNCWVLHNIRLRAANRRLCTSCVLRLHPASFCPS 64
P LPPPP + PPT K EC NCG+ W+LH++R+R NRRLCTSCVLRLHP+SFCPS
Sbjct: 4 PPLPPPPSTPNPPT-KMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFCPS 63
Query: 65 CFQFYDPSVSPHPSNRLACVKCSSITHSHCVVNSASSSSSSSDPQML----SSSYLCPPC 124
CFQFYD SVSPHPSNR C KCSSITHSHCVVN A DPQ+L SSSYLCPPC
Sbjct: 64 CFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPA-----CPDPQLLSSTTSSSYLCPPC 123
Query: 125 ANPNFCFFELDSGPRGSTVTVDRKISVVLLCAAKIASASMAKALALARADADRKVREAAV 184
A PNF FF+ DS PR S ++DRK +VVLLCAAKIASASMAKA+ +ARADA+RKVREAA+
Sbjct: 124 AKPNFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAM 183
Query: 185 AKKRAREAIEHVGFVMARERARRMEEEAAAMEVSGSGSVGVKENERNRNVGSMVKVENSV 244
A+KRAREA+EHVGFV+ARERARR EE A++EVSGSG++GVKE ERNR +G VK EN+
Sbjct: 184 ARKRAREALEHVGFVVARERARRKEE--ASVEVSGSGNLGVKEKERNRTLGPTVKAENAF 243
Query: 245 EAPVVPCLNAGCSSSGLSQRRESLNGFVRQISMVKNEGAVSMEEDVRQKNVE-ADRLQRN 304
E P V LN G S L+QRRESLNGFVRQ+SMVKNE A SMEE R KNVE A+RLQ N
Sbjct: 244 EMPAVSTLNTG---SALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSN 303
Query: 305 NNIA----DNGNDNGEVENVQNDHIGGNVNTT 328
NNI N+NGEVE+V+NDHIGG VNTT
Sbjct: 304 NNIGLLNEKEKNENGEVEHVKNDHIGGTVNTT 324
BLAST of Sed0007403 vs. NCBI nr
Match:
XP_008450515.1 (PREDICTED: uncharacterized protein LOC103492096 [Cucumis melo] >KAA0050965.1 putative DNA binding protein [Cucumis melo var. makuwa] >TYK10311.1 putative DNA binding protein [Cucumis melo var. makuwa])
HSP 1 Score: 397.1 bits (1019), Expect = 1.4e-106
Identity = 226/332 (68.07%), Postives = 259/332 (78.01%), Query Frame = 0
Query: 5 PNLPPPPPSSIPPTSKSPTECCNCGNHNCWVLHNIRLRAANRRLCTSCVLRLHPASFCPS 64
P+LPPPP + PPT K EC NCG+ W+LH++R+R NRRLCTSCVLRLHP+SFCPS
Sbjct: 4 PHLPPPPSTPNPPT-KMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFCPS 63
Query: 65 CFQFYDPSVSPHPSNRLACVKCSSITHSHCVVNSASSSSSSSDPQML----SSSYLCPPC 124
CFQFYD SVSPHPSNR C KCSSITHSHCVVN A DPQ+L SSSYLCPPC
Sbjct: 64 CFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPA-----CPDPQLLSSTSSSSYLCPPC 123
Query: 125 ANPNFCFFELDSGPRGSTVTVDRKISVVLLCAAKIASASMAKALALARADADRKVREAAV 184
A PNF FF+LDS PR S ++DRK +VVLLCAAKIAS SM KA +ARADA+RKVREAA+
Sbjct: 124 AKPNFSFFDLDSKPRISPKSIDRKTAVVLLCAAKIASTSMGKAAIVARADAERKVREAAM 183
Query: 185 AKKRAREAIEHVGFVMARERARRMEEEAAAMEVSGSGSVGVKENERNRNVGSMVKVENSV 244
A+KRAREA+EHVGFV+ARERARR EE A++EVSGSG++G+KE ERNRN+G VK EN+
Sbjct: 184 ARKRAREALEHVGFVLARERARRKEE--ASVEVSGSGNLGMKEKERNRNLGPTVKAENAF 243
Query: 245 EAPVVPCLNAGCSSSGLSQRRESLNGFVRQISMVKNEGAVSMEEDVRQKNVE-ADRLQRN 304
E P V LN G + L+QRRESLNGFVRQ+SMVKNE A SMEE R KNVE A+RLQ N
Sbjct: 244 EIPAVSTLNTG---TALTQRRESLNGFVRQMSMVKNEVAASMEESARHKNVEVAERLQSN 303
Query: 305 NNIA----DNGNDNGEVENVQNDHIGGNVNTT 328
NNI N+NGEVE+V+NDHIGG VNTT
Sbjct: 304 NNIGLLNEKEKNENGEVEHVKNDHIGGTVNTT 324
BLAST of Sed0007403 vs. NCBI nr
Match:
KAG7024046.1 (hypothetical protein SDJN02_15075, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 392.5 bits (1007), Expect = 3.6e-105
Identity = 220/318 (69.18%), Postives = 253/318 (79.56%), Query Frame = 0
Query: 5 PNLPPPPPSSIPPTSKSPTECCNCGNHNCWVLHNIRLRAANRRLCTSCVLRLHPASFCPS 64
P+LPPPPP +K TEC NCG+H W+LH++RLR NRRLCTSCVLRLHP SFCPS
Sbjct: 4 PHLPPPPP------TKVQTECGNCGSHGRWILHHVRLRGINRRLCTSCVLRLHPTSFCPS 63
Query: 65 CFQFYDPSVS-PHPSNRLACVKCSSITHSHCVVNSASSSSSSSDPQMLSS--SYLCPPCA 124
CF FYDP+VS PHPSNRL C+KCSSITHSHCV+N A SSDP +LSS SYLCPPCA
Sbjct: 64 CFHFYDPAVSPPHPSNRLTCLKCSSITHSHCVLNPA-----SSDPHLLSSSTSYLCPPCA 123
Query: 125 NPNFCFFELDSGPRGSTVTVDRKISVVLLCAAKIASASMAKALALARADADRKVREAAVA 184
PNF FF+LDS PR S ++DRK +VVLLCAAKIASASM KA+ +ARADA+RKVRE AVA
Sbjct: 124 KPNFSFFDLDSLPRNSHKSIDRKTAVVLLCAAKIASASMGKAVIVARADAERKVREVAVA 183
Query: 185 KKRAREAIEHVGFVMARERARRMEEEAAAMEVSGSGSVGVKENERNRNVGSMVKVENSVE 244
+KRAREA+EHVGF++ARERARR EE A+MEVSGSG++ K+ ERNRN+GSMVK ENS+E
Sbjct: 184 RKRAREALEHVGFLLARERARRKEE--ASMEVSGSGNMETKDKERNRNLGSMVKTENSLE 243
Query: 245 APVVPCLNAGCSSSGLSQRRESLNGFVRQISMVKNEGAVSMEEDVRQKNVEADRLQRNNN 304
P VP LN G + L+QRRESLNGFVRQ+SMVKNE A S++E EADRLQ NNN
Sbjct: 244 TPAVPTLNTGTT---LTQRRESLNGFVRQMSMVKNEAAASVQE-----TAEADRLQSNNN 296
Query: 305 IADNGNDNGEVENVQNDH 320
IA DNG+VENVQNDH
Sbjct: 304 IA----DNGDVENVQNDH 296
BLAST of Sed0007403 vs. ExPASy TrEMBL
Match:
A0A6J1DQC5 (uncharacterized protein LOC111022599 OS=Momordica charantia OX=3673 GN=LOC111022599 PE=4 SV=1)
HSP 1 Score: 399.1 bits (1024), Expect = 1.8e-107
Identity = 227/344 (65.99%), Postives = 266/344 (77.33%), Query Frame = 0
Query: 8 PPPPPSSIP---------PTSKSPTECCNCGNHNCWVLHNIRLRAANRRLCTSCVLRLHP 67
PPPPPS +P P +K P+EC NCG+ + W+LH++RLR NRRLCTSCVLRLHP
Sbjct: 6 PPPPPSVVPAMVNNPNPNPPTKMPSECGNCGSQSRWMLHHVRLRGVNRRLCTSCVLRLHP 65
Query: 68 ASFCPSCFQFYDPSVSPH--PSNRLACVKCSSITHSHCVVNSASSSSSSSDPQML---SS 127
SFCPSCFQFYDPS SPH PSNR CVKCSSI+HSHCV+ S SSSDP L SS
Sbjct: 66 TSFCPSCFQFYDPSASPHPQPSNRFTCVKCSSISHSHCVL-----SPSSSDPHPLSSSSS 125
Query: 128 SYLCPPCANPNFCFFELDSGPRGSTVTVDRKISVVLLCAAKIASASMAKALALARADADR 187
SYLCPPCA PNF FF+LDS PR S ++DRK++VVLLCAAKIASASM KA+ +ARADA+R
Sbjct: 126 SYLCPPCAKPNFSFFDLDSKPRISDKSIDRKMAVVLLCAAKIASASMGKAVIVARADAER 185
Query: 188 KVREAAVAKKRAREAIEHVGFVMARERARRMEEEAAAMEVSGSGSVGVKENERNRNVGSM 247
KVREAA+A+KRAREA+EHVGFV+ARERARR EE A++EVSGSGS+G+KE ERNRN+GSM
Sbjct: 186 KVREAAIARKRAREALEHVGFVVARERARRKEE--ASVEVSGSGSIGIKEKERNRNLGSM 245
Query: 248 VKVENSVEAPVVPCLNAGCSSSGLSQRRESLNGFVRQISMVKNEGAVSMEEDVRQKNVEA 307
VK+ENS E V N +SS L+ RRESLNGFVRQ+SMVKN+ A S+EE +RQKNVEA
Sbjct: 246 VKMENSCEGSAVANSN---TSSALTHRRESLNGFVRQMSMVKNDVAASLEEALRQKNVEA 305
Query: 308 DRLQRNN-----------NIADNGNDNGEVENVQNDHIGGNVNT 327
DRLQ +N N D+G++NGEV+ V ND IGGNVNT
Sbjct: 306 DRLQSSNNNTLNEKEKSGNFGDSGHENGEVKRVHNDQIGGNVNT 339
BLAST of Sed0007403 vs. ExPASy TrEMBL
Match:
A0A0A0LYS3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G560710 PE=4 SV=1)
HSP 1 Score: 398.3 bits (1022), Expect = 3.1e-107
Identity = 228/332 (68.67%), Postives = 259/332 (78.01%), Query Frame = 0
Query: 5 PNLPPPPPSSIPPTSKSPTECCNCGNHNCWVLHNIRLRAANRRLCTSCVLRLHPASFCPS 64
P LPPPP + PPT K EC NCG+ W+LH++R+R NRRLCTSCVLRLHP+SFCPS
Sbjct: 4 PPLPPPPSTPNPPT-KMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFCPS 63
Query: 65 CFQFYDPSVSPHPSNRLACVKCSSITHSHCVVNSASSSSSSSDPQML----SSSYLCPPC 124
CFQFYD SVSPHPSNR C KCSSITHSHCVVN A DPQ+L SSSYLCPPC
Sbjct: 64 CFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPA-----CPDPQLLSSTTSSSYLCPPC 123
Query: 125 ANPNFCFFELDSGPRGSTVTVDRKISVVLLCAAKIASASMAKALALARADADRKVREAAV 184
A PNF FF+ DS PR S ++DRK +VVLLCAAKIASASMAKA+ +ARADA+RKVREAA+
Sbjct: 124 AKPNFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAM 183
Query: 185 AKKRAREAIEHVGFVMARERARRMEEEAAAMEVSGSGSVGVKENERNRNVGSMVKVENSV 244
A+KRAREA+EHVGFV+ARERARR EE A++EVSGSG++GVKE ERNR +G VK EN+
Sbjct: 184 ARKRAREALEHVGFVVARERARRKEE--ASVEVSGSGNLGVKEKERNRTLGPTVKAENAF 243
Query: 245 EAPVVPCLNAGCSSSGLSQRRESLNGFVRQISMVKNEGAVSMEEDVRQKNVE-ADRLQRN 304
E P V LN G S L+QRRESLNGFVRQ+SMVKNE A SMEE R KNVE A+RLQ N
Sbjct: 244 EMPAVSTLNTG---SALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSN 303
Query: 305 NNIA----DNGNDNGEVENVQNDHIGGNVNTT 328
NNI N+NGEVE+V+NDHIGG VNTT
Sbjct: 304 NNIGLLNEKEKNENGEVEHVKNDHIGGTVNTT 324
BLAST of Sed0007403 vs. ExPASy TrEMBL
Match:
A0A5D3CEV9 (Putative DNA binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004650 PE=4 SV=1)
HSP 1 Score: 397.1 bits (1019), Expect = 7.0e-107
Identity = 226/332 (68.07%), Postives = 259/332 (78.01%), Query Frame = 0
Query: 5 PNLPPPPPSSIPPTSKSPTECCNCGNHNCWVLHNIRLRAANRRLCTSCVLRLHPASFCPS 64
P+LPPPP + PPT K EC NCG+ W+LH++R+R NRRLCTSCVLRLHP+SFCPS
Sbjct: 4 PHLPPPPSTPNPPT-KMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFCPS 63
Query: 65 CFQFYDPSVSPHPSNRLACVKCSSITHSHCVVNSASSSSSSSDPQML----SSSYLCPPC 124
CFQFYD SVSPHPSNR C KCSSITHSHCVVN A DPQ+L SSSYLCPPC
Sbjct: 64 CFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPA-----CPDPQLLSSTSSSSYLCPPC 123
Query: 125 ANPNFCFFELDSGPRGSTVTVDRKISVVLLCAAKIASASMAKALALARADADRKVREAAV 184
A PNF FF+LDS PR S ++DRK +VVLLCAAKIAS SM KA +ARADA+RKVREAA+
Sbjct: 124 AKPNFSFFDLDSKPRISPKSIDRKTAVVLLCAAKIASTSMGKAAIVARADAERKVREAAM 183
Query: 185 AKKRAREAIEHVGFVMARERARRMEEEAAAMEVSGSGSVGVKENERNRNVGSMVKVENSV 244
A+KRAREA+EHVGFV+ARERARR EE A++EVSGSG++G+KE ERNRN+G VK EN+
Sbjct: 184 ARKRAREALEHVGFVLARERARRKEE--ASVEVSGSGNLGMKEKERNRNLGPTVKAENAF 243
Query: 245 EAPVVPCLNAGCSSSGLSQRRESLNGFVRQISMVKNEGAVSMEEDVRQKNVE-ADRLQRN 304
E P V LN G + L+QRRESLNGFVRQ+SMVKNE A SMEE R KNVE A+RLQ N
Sbjct: 244 EIPAVSTLNTG---TALTQRRESLNGFVRQMSMVKNEVAASMEESARHKNVEVAERLQSN 303
Query: 305 NNIA----DNGNDNGEVENVQNDHIGGNVNTT 328
NNI N+NGEVE+V+NDHIGG VNTT
Sbjct: 304 NNIGLLNEKEKNENGEVEHVKNDHIGGTVNTT 324
BLAST of Sed0007403 vs. ExPASy TrEMBL
Match:
A0A1S3BQ20 (uncharacterized protein LOC103492096 OS=Cucumis melo OX=3656 GN=LOC103492096 PE=4 SV=1)
HSP 1 Score: 397.1 bits (1019), Expect = 7.0e-107
Identity = 226/332 (68.07%), Postives = 259/332 (78.01%), Query Frame = 0
Query: 5 PNLPPPPPSSIPPTSKSPTECCNCGNHNCWVLHNIRLRAANRRLCTSCVLRLHPASFCPS 64
P+LPPPP + PPT K EC NCG+ W+LH++R+R NRRLCTSCVLRLHP+SFCPS
Sbjct: 4 PHLPPPPSTPNPPT-KMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFCPS 63
Query: 65 CFQFYDPSVSPHPSNRLACVKCSSITHSHCVVNSASSSSSSSDPQML----SSSYLCPPC 124
CFQFYD SVSPHPSNR C KCSSITHSHCVVN A DPQ+L SSSYLCPPC
Sbjct: 64 CFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPA-----CPDPQLLSSTSSSSYLCPPC 123
Query: 125 ANPNFCFFELDSGPRGSTVTVDRKISVVLLCAAKIASASMAKALALARADADRKVREAAV 184
A PNF FF+LDS PR S ++DRK +VVLLCAAKIAS SM KA +ARADA+RKVREAA+
Sbjct: 124 AKPNFSFFDLDSKPRISPKSIDRKTAVVLLCAAKIASTSMGKAAIVARADAERKVREAAM 183
Query: 185 AKKRAREAIEHVGFVMARERARRMEEEAAAMEVSGSGSVGVKENERNRNVGSMVKVENSV 244
A+KRAREA+EHVGFV+ARERARR EE A++EVSGSG++G+KE ERNRN+G VK EN+
Sbjct: 184 ARKRAREALEHVGFVLARERARRKEE--ASVEVSGSGNLGMKEKERNRNLGPTVKAENAF 243
Query: 245 EAPVVPCLNAGCSSSGLSQRRESLNGFVRQISMVKNEGAVSMEEDVRQKNVE-ADRLQRN 304
E P V LN G + L+QRRESLNGFVRQ+SMVKNE A SMEE R KNVE A+RLQ N
Sbjct: 244 EIPAVSTLNTG---TALTQRRESLNGFVRQMSMVKNEVAASMEESARHKNVEVAERLQSN 303
Query: 305 NNIA----DNGNDNGEVENVQNDHIGGNVNTT 328
NNI N+NGEVE+V+NDHIGG VNTT
Sbjct: 304 NNIGLLNEKEKNENGEVEHVKNDHIGGTVNTT 324
BLAST of Sed0007403 vs. ExPASy TrEMBL
Match:
A0A2P5A8B4 (Zinc finger, FYVE/PHD-type OS=Trema orientale OX=63057 GN=TorRG33x02_355940 PE=4 SV=1)
HSP 1 Score: 210.7 bits (535), Expect = 9.3e-51
Identity = 116/229 (50.66%), Postives = 169/229 (73.80%), Query Frame = 0
Query: 2 NARPNLPPPPPSSIPPTSKSPTECCNCGNHNCWVLHNIRLRAANRRLCTSCVLRLHPASF 61
N P+L P P ++ T+ S EC NCG+ WVLH++R+R +RRLCTSCVLRLHP+SF
Sbjct: 8 NPNPSLSPSPYNNARLTAPSSGECGNCGSQKRWVLHHVRIRGIHRRLCTSCVLRLHPSSF 67
Query: 62 CPSCFQFYDPSVS-PHPSNRLACVKCSSITHSHCVVNSASSSSSSSDPQMLSSSYLCPPC 121
CP+CFQFYD + + P S RL C KCSS THSHC SSSSS +S+YLCPPC
Sbjct: 68 CPTCFQFYDSNNNVPPSSKRLTCSKCSSFTHSHCAPTPQPPSSSSS-----ASAYLCPPC 127
Query: 122 ANPNFCFFELDSGPRGSTVTVDRKISVVLLCAAKIASASMAKALALARADADRKVREAAV 181
A+P+F FF++DS P + +D++++++LLCAAKI++ASM+KA+ LAR +A+R+VREAA+
Sbjct: 128 ASPSFVFFDIDSDPNRA---IDKRLALILLCAAKISAASMSKAVILARGEAERRVREAAL 187
Query: 182 AKKRAREAIEHVGFVMARERARRMEEEAA--AMEVSGSGSVGVKENERN 228
A+KRAREA++++ +++ + + ++AA + EVSGSG+VG ++ E++
Sbjct: 188 ARKRAREALDNLAVLVSGRGDKAVRKDAAEGSAEVSGSGNVGSRQKEKS 228
BLAST of Sed0007403 vs. TAIR 10
Match:
AT1G09520.1 (LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786); BEST Arabidopsis thaliana protein match is: PHD finger family protein (TAIR:AT3G17460.1); Has 56 Blast hits to 56 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 4; Plants - 46; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )
HSP 1 Score: 142.9 bits (359), Expect = 4.6e-34
Identity = 108/282 (38.30%), Postives = 147/282 (52.13%), Query Frame = 0
Query: 12 PSSIPPTSKSPT---------ECCNCGNHNCWVLHNIRLRAANRRLCTSCVLRLHPASFC 71
PSS TS S T C +CG+ + WV+H +RLRA+ R CT C+LR HPASFC
Sbjct: 4 PSSTTATSTSATSDAAANSTERCDDCGSSDAWVIHTVRLRASLRFFCTHCLLRNHPASFC 63
Query: 72 PSCFQFYDPSVSPHPSNRLAC-VK-CSSITHSHCVVNSASSSSSSSDPQMLSSSYLCPPC 131
P CF YD SP R++C +K C S+TH HC + D L SYLCPPC
Sbjct: 64 PGCFALYDS--SPPSFRRVSCSIKGCHSLTHIHC----------AGDESHL--SYLCPPC 123
Query: 132 ANPN-FCFFELDSGPRGSTVTVDRKISVVLLCAAKIASASMAKALALARADADRKVREAA 191
+PN F FF GS VD+ +S LCAAKIA++SM KA+ A+ + DR+ +EAA
Sbjct: 124 RDPNSFSFFRPIVDENGSRF-VDKALSEAFLCAAKIAASSMNKAVMTAKCETDRRGKEAA 183
Query: 192 VAKKRAREAIEHVGFVMARERARRMEEEAAAMEVSGSGSVGVKENERNRNVGSMVKVENS 251
+AKKRAREA+E V + A+E+AR + + V + N G+ VK S
Sbjct: 184 LAKKRAREALEQVVMLDAKEKARSVVPKLKEAPVDQKPKLSPASN------GATVKETES 243
Query: 252 VEAPVVPCLNAGCSSSGLSQRRESLNGFVRQISMVKNEGAVS 282
+ P ++ G ++ + Q++ VK E S
Sbjct: 244 SDTTTTPTTTTTKNNGGTEKQNPA-----TQLAKVKQEADAS 259
BLAST of Sed0007403 vs. TAIR 10
Match:
AT3G17460.1 (PHD finger family protein )
HSP 1 Score: 90.5 bits (223), Expect = 2.7e-18
Identity = 70/195 (35.90%), Postives = 106/195 (54.36%), Query Frame = 0
Query: 24 ECCNCGNHNCWVLHNIRLRAANRRLCTSCVLRLHPASFCPSCFQFYDPSVSPHPSNRLAC 83
EC C +H + A RRLCT C+L+ + FC CF +D +V P R+ C
Sbjct: 9 ECIVCREKEPSFIHTVIKTGAFRRLCTDCLLKEYREHFCSVCFNLFDNAVPPQA--RIIC 68
Query: 84 VKCSSITHSHCVV----NSASSSSSSSDPQMLSSSYLCPPCANPNFCFFEL----DSGPR 143
V C S TH C +SA+SSSSS+ P +SS+ C PC+NPNF FF + P
Sbjct: 69 VNCPSSTHLSCSTQPPSSSAASSSSSAPPP--ASSFTCQPCSNPNFTFFPKSRVNEDVPD 128
Query: 144 GSTVTVDRKISVVLLCAAKIASASMAKALALARADADRKVREAAVAKKRAREAIEHVGFV 203
+ +T K ++ L+ A I+ A+M KA+AL + +A +K+ A AK RA+ A+ ++ +
Sbjct: 129 ETPLT--PKSAMALVAAGNISVANMNKAVALLKEEALKKIIAAKTAKLRAKGALTNLQDI 188
Query: 204 MARE---RARRMEEE 208
+ R+ +R E+E
Sbjct: 189 VIRQSKVTGKRKEDE 197
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038878318.1 | 2.4e-109 | 69.67 | uncharacterized protein LOC120070585 [Benincasa hispida] | [more] |
XP_022155464.1 | 3.8e-107 | 65.99 | uncharacterized protein LOC111022599 [Momordica charantia] | [more] |
XP_011659447.1 | 6.5e-107 | 68.67 | uncharacterized protein LOC105436183 [Cucumis sativus] >KGN65987.1 hypothetical ... | [more] |
XP_008450515.1 | 1.4e-106 | 68.07 | PREDICTED: uncharacterized protein LOC103492096 [Cucumis melo] >KAA0050965.1 put... | [more] |
KAG7024046.1 | 3.6e-105 | 69.18 | hypothetical protein SDJN02_15075, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DQC5 | 1.8e-107 | 65.99 | uncharacterized protein LOC111022599 OS=Momordica charantia OX=3673 GN=LOC111022... | [more] |
A0A0A0LYS3 | 3.1e-107 | 68.67 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G560710 PE=4 SV=1 | [more] |
A0A5D3CEV9 | 7.0e-107 | 68.07 | Putative DNA binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... | [more] |
A0A1S3BQ20 | 7.0e-107 | 68.07 | uncharacterized protein LOC103492096 OS=Cucumis melo OX=3656 GN=LOC103492096 PE=... | [more] |
A0A2P5A8B4 | 9.3e-51 | 50.66 | Zinc finger, FYVE/PHD-type OS=Trema orientale OX=63057 GN=TorRG33x02_355940 PE=4... | [more] |
Match Name | E-value | Identity | Description | |
AT1G09520.1 | 4.6e-34 | 38.30 | LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12... | [more] |
AT3G17460.1 | 2.7e-18 | 35.90 | PHD finger family protein | [more] |