Sed0006929 (gene) Chayote v1

Overview
NameSed0006929
Typegene
OrganismSechium edule (Chayote v1)
DescriptionPre-mRNA-splicing factor 38
LocationLG01: 26949032 .. 26965829 (-)
RNA-Seq ExpressionSed0006929
SyntenySed0006929
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATAAAGACTTCTGAGAAGCCAATTGATTCTTTGCTGGAGAAGGTTCTATGTATGAATATTCTGTCTTCTGATTACTTTAAGGAGCTTTATCGTTTGAAGACATACCATGAAGTGGTCGATGAAATTTATAACCAAGTTGATCATGTAGAGCCATGGATGACTGGTAACTGCCGTGGTCCTTCAACAGCATTCTGCCTTTTGTACAAATTTTTCACTATGAAACTTACTGTGAAGCAAATGCATGGGCTGTTAAATCACGAGGATTCTCCTTACATCAGAGCGGTAGGTAGAATCCCTTTGACCTTTAGTATCATATTTGATTATAAATTTACATGTATTTTTTTGTATCATTTATGTCACGTTACACTCTATTTGTGGATTCCAAGTCGATTATTAATTTTTTCTAAACAAATAATGGACGCTGACTGAGACTGGCAGCTTGCCACGTGTCTATTATTATAAGAATTTATATTCTTCAATATTGCATGTCTTTTTACCATCATTTTTATGATCTGGTCCATATGGTAAAGGAAAATAGTATATTATGCCGGGTTTGTAACTTTGATTAATAATGTACAAAGTTAGATCATGTATTTCTGTTGTAATCGGTTTAATATGGTCTTTTGGTGAACGCAACTGTAAGAATTTTGTAGGTTTTCTTGGAGAAGTGTCATTATCTGTTTGCTTTATGCTGTTTTTTTAAAGAAAGATAGCTGAAAGTTGAGTAATATTATGATGGATATAACAATAAAAAGTTATTTTTCCTAAACTATTGTTATGAATTTATGCTGTTTGTACTTTTATTTCGTTTTCAATTTTATGAATGACTTTTATTGGGGATGTTGGTGCGTACTTCTACCAGTAGGCAAGTTATCTGATTTTAGGAACTTTGTCCTCTTTCTATCTTATTTTTCTGTTTAGATGGACTGAAGAAATGAATTGGTATCACAAATTCTTTGGATTCTTCTATGAAGTTGTTCTTTGGCTCTTTATGCCAGTTCATGCAAATTACTGTATTTCTCTCGTTTATTAAACAGTCGTATACATGCATTTGCTTTATAACATTCTTTCCTTGCTCACCAGATTTTATGAACAAAGGATGAGCCTTGTGTCTTTGGGGTTGCTCTGCCCTCTCTCACACTATAAACTAATAGTGCCTTTGCTTTTCTTTGCAGTTATCTAAGGTTTGAGGTGACCTTTTTTATTTTTATTTTTAATGATACGGATATTATTTGAATCCCTTGGCCTTGGGTTTATTTATCTGTTAAATGATATTCGGCATGTACACAATGTTTCCATATGCCTATTGCATCTTCTTTCTATTTTGTATTCTTAAGGTCAGCAGAATGCATAAGAGAACAAAAATGTGGTTGCTTATATTCTTGCATGCTTCTTTTTCTTCATAATTTGCTTTCTTATCTTATTATTATGATGCCCTTAGTTGTTCCATGTTTAAGAAGTATGACTCTAGCTGTATTATCTAGATTTGGTTCTGCTAGCATTTGACGTTATTTTGTAAAATTATAATTTCCAGATTGGATTCCTCTACTTGAGATATGTTGCAGATCCGAAGACTCTCTGGAATTGGTTTGAACCTTATGTTAAAGATGAAGAGGTATGTGATGCACATATGTTTTTTTTTCCTTATGAGTACTGTTTCAACACAACAGTCACCATGCATGTGTTTGAATTAGAAATTTCTTTAATGCGACTGTTAAGTTGTTTTCTGTCCTTTGTATCATCGTTTTTTTTATCATATATATATTTTGACATGTTAGATTTTTCTATTTATTCCTGTGAAGTTCAATTCTTTAAAAATCGACTCAAAATATTCTTTAAAAATTTAATTGATTATAAAATGGCTTACTAGCTTACTAGCTATGACATTACTCCTTCGATGTCTCCCGATGCTTAGCCTAGGGACGGGCGTGGTTACCCTTGTTTCAAAATAAAGAGAATGGCTTACTACCTGTCCCCAAGGGGTGGCACAATGGTTGACGACTTGGGTTTTGAGGGTATGCTTCCCTCAAGGTCTCAGGTTCGAGACTCAGCTGTGACATTACTCATTCGATGTCTCTCGGTGCCTGACCTAGAGATGGGTGGTTACCCTTGTTTCAAAAAAAAGGAATGGCTTACTAGCCCTGGAAATGTAGTGGAGTAGAGCTTTGATTTCTGTTTATAAAACTGAAAAAAAATGTCTTAATAATACTATTTCATATGTATCCAATATAAGTAACTAAATAAATATAATTATACGTAGAGGCAGGGCGGGGATGAAGATAATAATCTTGATGTATTTTTTAACTAGTTCATAATCTAGAATTTAATTAATTCATTATCATGTTTTAATGTAAAATATAAATTAATATGATTGGTTTAAATCAATTAACATGTTTGATTTGAATTAACCATAATATTGAATTGCATTAATTCACAACTGTGAATTACATTATTAGTGTAGGAAAGTTAAGGGGATTTTTTGTAATTTATGATTCGTTACTTTGTTCTTTTAAATCCATATAAATAGTAAGACACACTTATGTATTCATTAACATTTGATTCATCAATAAAGATTGGAGTTTTTAGACTTCTTGGAGAATTATTCTCTTTTGACCGCTAGCCCTGACCTCGCACACTTGCACATTGGATTTCATCCTCCACCCCTCAGAGCTCATTCTTTTAGTGCGGTTCATATAACCCCATTGAAAATGGTAGTGTCTTGCTCCTTCAAATAAACCAGAGATGTTTCTGTTAATCCTTCAAATAAACCAGAGATGTTTCTGTTAGTGTTATTTATTTAATTATTGTATATTGATGTATTTATCTATTTAGGCCCATTTGGCCCATTAGACGTAGCTAGGGTTTTTCACTTGTATTCCTATAAAAAGACTTGACTAACATGAATAATGATATCACGACTTTTCCAACTCTATTGTTTTCATGGTATCAAAGCCCTAGGTAATTAGGGTGTTTTCTTGTTTTTTTTGTTCGTGGGTGTCCTTGTAGTTATTGCTAAGTACTCATTTTGTGGGTTTTAGTCGTTTGGGTTACTGGGTGTTGAGATTGAAGTTTCCTTTTGTGGGTTTGTTGTTCAAGCCGTGGTATTGTGATAGAATCTACTAACTTTATTAATAAATCTCTAGAGAGAATCTCCTTTAGAGCCAATAGTTCCAAAGAAAACAACTGAATGAATGAACAACAATGACCTAACATCTCCTATTTATAACCCTAGCCTCTAACTTACTCTCCAAGTAAACCTAATAATAACCTAATTTAATAATAAAACGCTAATAATCCATAAATGACCATTACAATTAAAATAACAATTAATAATTAAATACTTATAACTAATAAATAATTATGTCACTTCTTGCTTTGCCTTGAATAGACTTTTAGGGTTCTCAAGATCGTATCAATACTTTCCCCCCAAAGAGCCACCTTGTCGTCAAGGTGTTTCATCTCTGAAGTCATCTCCCACAATCCCATCTGTTAGGGAAAAATCTATCACACCGGCATCCTGGGAGTCATTCTCATCTCGCATGACCAACACCGGCAAGGCTTGGAGCTCCTTCTTCTGACAACGATGCCCCAGCACAAACCGCTCATCACAGCAAAAACATAACCCCTTGTCCTTGTGTACTCAAATCTCACTATCAATGAGCCTTGTAAAAGAAATCGGGGTAATGGTTGTTGTCTTGGTGATCGTGGAAGAATTTCCTGGACCGCCAGATCCCAGAATTGCCATCCTACTTTAGGCTTAATCATTGCAGAACTACATCCTCAAATAACGTCCTCCATGTGAGCCATACACATTTTCTCCTCGATACCCACTGGTCGTAGTTTTTTCATTGCGCTCTGTATTTCCTCCTTCAAGCCACTTTCCTATTTTCCCTCCAATGCGCTTGCGCTTATATTGCGCATTCCCTTAGCATAGCGTTCGAACAACTGGCGATACTCCTTCACCATGCCTTCTTGCTTTAAACTCATAAAATTGGCGTACTTGTTTGCTTTTGACGTCGGTTGGAAACGCTCTAATAACAAGTCCTTGAACTCGTTTCAGGAACGAAAGGGGGCTCGGTCCTCATACTGAAGCCATTGTAACGCCTCCCCTTCCAAGCACAACCCTGGTGCATCCACTCCTTCATGTTCTGTCAATTTATTCACCAGAAAGTATCGCTCAACTCGGCCTAACCACCCCACCGGGTCCTCATCGGCAAGACCTTTGAAAATCGACATCTCCAACTTCTTCAATCTCTTGTCACACACTGGTCCCTCCCTTCTCGCTGCTCTTTGTTCTCTCCGTTCAAACATCTCTTCTCCTCCTCGCCTAAATTCCCGTCCTGTAACTTACAATCGGCAAGACCATTGTAAAGACGCAAGTTTTTGGAGCGACACATGGTTGGGAAATCAGCCTCTCAAATTTGCTTACCCTATCTTCTCCGATTTATCATTAAAGAAAGAGGCCAGAGTATCAGATGTATGGGACGACAGAAATGCATCTTGGAATATCCACTTGAGAACAAATATGGACTCTGGACCCCATTACCTTGACAAACAGAATGGAATCATGGCTATGGAATCTAGGTATTGCCACTTTCTCCACCAAATCTCCGCTGCACTCCATATCGTCGAGTAATCTTCCACAAACAGACTTGTTTATTGAGATTTGGAAGGGCTTACAAAGCATAAACAAAGAAAGTCAAATTTTTCACATGGGAGCTTAGTCATGGTATTTTGAATACACAAGGCAATTGCGACTTAAAGCTAACAATGCTACGTGCAACTCCTGTCTCTTGGATGCTGCTACTTATGCTACAGTGATATGGAATCCCAAATCCATCTTTTGACCATCAAAGAGCTTGTTCTCAATTCTCTCACAGGACACCCATTTAAAGATGAAAATAAGATTTTGTGGAACCTTTTTCTATTTGCTTTTTGGTTGCAAATTTTGAAGGATCGAAATGGCATCATGTTTTCAGACAATCTTAAGAGGGAAGTCTTATCGAATCCATCACTTTCCTTGCTATGACAAGGGCTCATTTTATATCTCTTTGAAAGGATTATAATTTTGTTACTTTTCAATCTCACTGGCGAAGTTTTATAAAATTACCTGCATGATAAGTCTTTTTTGCAACTTTTTATATATCAACAATTTTTTTTGTTAAACTGTTTCCTGTCCTATTTCAAGGTGTCTGTGCTTTATTAGAATTTATCTTCCGTTTTCATTGTTCTTACACTTTGCTGTCGTTTGTTATTATCGTCATTGATATTGGAGCTCCAATATCTAGTGACTTGTTTCTTAGGTTATCATTTGTGATTTGCAGGAAGATAGGAAGATTTTTAACGGACGTCTTGCATTTTTAATGGATTTAATACAATCCTAAAGCTTCAATAGTAGAGAAAGAACTAATGGACTTTTTATGTTTTAGGAATTTTCACCGGGATTCAATGGTCGAATGGCTACAATGGGTGCTTATGTGCGCGATTTGCTCCTTGGACAGGTCAGGTTATGTACCAACTCTTACACTTCTGCTATCAAATATTTTCTAACTTTTTAACTTAAATATATATCTTTTACATTTCTTTTACGTCTTTGCTTCAAGATAAATTGTGTATTCATCAGAATTGCTGCATTGTTGGGGACGGATATCCTGAGATTCTGAATGTTACTCACTCATGGTTTGAAGATTAAGAATTATGTATAACACACCATTAATAGAGTCAAAGACTTCCACTAAGAGATGAGGAGGTGTAAAAAAGTTCAACTTCCTCCCTCTCTCTCTCCCTCTCCCCCCTCTTGTGAAGTCATGTTCTTTGTTTTAGAAGGTGGTGCTTAGCTTTTTTGAGGCCAAGGTTAAGTTGACTTCACAATGTGCTTTTGGTGTCTTGTCCACTTGAGTGTTCTCTTCATTTTTTTTGTTTTGTTTGGTTAAACTTAAAATACCATTTTGGCTCCTAAACTTTGAGATTTGTTTTATTTTGATCCTTTAATTTTAGTTTCGAACTTTGAGGTTTCTTCCATTTTAGTCGGTGAACTTTCATAAAAACTTAAAATTGGTCCCTATTAATATTAGTAATTTTAATACAATCAAAATCAAAATGTGAACATATTTTTAAAATATATACAGGAAGATTATAATTACTTTTAAAGACGAACAAACAAATTTTTTTCCGAAGTATCGATTTTGAGCTTTGTTGTAAGTGGATTGAAATGACACAAATCTCAAAGTTAAGGGACTAAAATTGTTCCTTTGATAGTTATGGACTGAAATGTATTAAACCTCAAAATTCAAGGACAAAAATTGGACAATTCTCAAAGTTGAGGGACAAAAAAGGAACAAAATCTCAAAGTTGAGGAACCAAAGTGGTATTTTAATTTTTTTTTTGGATGAGAACACTGGATACAATTGTTTGTTGGATGGGTACTCTGGATAGAATCAGATCACCACCGACCCAAAGGATCAAGAGAAAACAACGTTTCACTTGTTCATGTGGGATCTTTGCATTTCTATGTATGCCCTTCAGACATGTAACACCCTTGCAACATTCCAAAGGTGCATGATGTTCATTTTCTCCTATATGATAGAAAATATCATGGAGGTTTTTATTGATGACTTTACTGTTTTTAGCAATTTGTTCAAGGAATGTTTTCAAAACCTGGAGCAAGTACTAGACGACTTTACTGTTTTTAGTGAAGAGACACATCTGGTATTTAACTGGTAGAAATGCCACTTTATGGTTAGCAAAAGGATATCGAGGAAAGGTATGGAGGTGGACAGGGCCAAGATTGAGGTGATTGAAAAGCTAAAGCCACCACATAATGTGGGGGGATACAAAAGTTTTCTAGGACATGCAAGATTTTACATTTATTAAGGACTAGATAGACAACTAGAAGCCGTTTTTCTATAGTAGTACAGTTCAGCTATGTGTCATTGAGAGTTTTGTTGACCTAATAGATTGGGTGGAGCAATTTATCTCCCTTCTGCCCAAGGATACCCCCTACCGGATGATTGCTAGCATCACACATCAGTTCAAAAAGCTTCTCCCAGTTAGGAGATGTCATGATATGGGTAGATACTATCGCTTTCTTTAGGGTTTCAAACACTTCAAGGAAATTATGATAAAAAACAAATGGTCGAGTTTGCACTTTGGTTTAACGATTTTTGTTTAATTTGTCATTTAGTCATAGGCTCTGATACTAACTGATAAGGATAACAACCTTACTTAAATCTCCACATTGGTGTGATATTGTCCATTTTGAGCATACACACTCATGGCTTTGCTTTCGGTTTCACTTAAAGGGCTTCACATCAATGGTATGGTTGTCATCACTTTATATACTCATGATCTTACCTTTATTTAACCAATGTTGGATAGTTTGTTTGCAACACCTAATTCTTTGCCAAACCTATTAGAATGTTTTTGAAATAATTAATTTAATTTATTGTTTGGACTTCATTGTTCTTTCTTTGTTTTTAAAAAAACCTAAATGTTCATGGAGAAAATAATGAAAGAGAATACAAGAAAAGAGAGACATTCTAAAAACGATTTCAATCAAGAGTAGTGTTTTAAAAAGCCCCATTAGGCGCGCGCCGAGGTGCGCCTAGGCCCAAGGCGCACCTCTTGCGCCTTGCCTGGGAAAGGCGTGGCACGCTTAATAAGGCGCGCGCCAAAAGCCGCACGCCTTGGGGGTTTTTTTATTTTCTTTATATTTTTTCATGTTTTCACCTTTATCCTTTGTGAGATCCCCGTACTAGGTCATTCAAAGCGCAAGATAACTAATTCAAGACACTTCAATACCTTAAATAACTTAATTCTTCAACTCACAATGACAACATTCGCTTAAATGAAAAGTTAATAGTTGAATCTAATATATGTTTTGTATATATTCTTAGTTAAACTTCATTTCTTTCCATGAAATGAAGGTCAATAGTTAAATATAATGTATGTTTTGTATATTATTCTTGGTTAAAACTTCATTTATGTCTATGGAAATGTGTATACACACACATATATAAAAAAAATTGTGTTTTTTATATAGTGCGCCTGATGTAATAAAGCCCGCGCCTTAATGCGCCTTGGGCTTTTTAAAACACTGATAAAGAGAAATAGTGCCTAAGAAGTAATTACAAAGATCTTCCAAACTTTGATCCAGAGAGAAGCATATAATTTAACGAGGTTGCAAACATCAAGACTTGGTCTTTCCACGCTTCTAAAAATTCTATGGTTTCTCTCTCCCAAAAGTCCTTATAAAATGACACACTCCAACTTGCCATAAAAAAGCCCCCTTTTCATGAAGTGCAGGGGAAGACAACAAAGGCTCCATCATCACATCTCTACAAAGACTTTGTTATCCTTAAACAAACGTCAATGGTCATCTTGCAATGCCTTTGTAGATGATCAAGGTCTTCGTCCCTCTTTCTACACAAAATGCAACACGATCGACCCTATTAAGTAGGGACTTGCTGTCTCACTCGACTAAGGTGTTATTCCTACCAAGGAGAACCTATCAAGTAAAAAACTTGGCATTTATTTGAAAATTTTACCCTTTATATAAAGATGTGAAGACCGAATCCTCCATAGAATAGGGGGAGACTAAGGGTCTAACAACTTTATGACTTTTCATATTGGATAAATGGAAAAAAATGAGGAAACATCCCTTTCCAGATAAATTTATCGAGATTTTTTCAATAATGTATTTCCAGCAAAAATCTCCATAACCATTTACCTAACAAAACACGTCTGTAGGTCGAGCTCTCAAATTACCCATTTCTTAGTCATTTGTACTTTGGCCAACCAACATTGATATCCTAAAAAAGAGAGAAAATAGGTAGAAATGCTACTTAGAATGGACTGAAAAACTTCTCTCAAGTGGAGAGATGTGTATGAATTTTACACACCATTCGATCCCCAAACGAGAGGGCACAAGGCGAATGGCCTAGAGGAAGGCCTAAGAAAGAAGGAAAGAATCTGACCTCACAACCTGCCCAATTGACCCACCTTTGAAGCTACTCTGGATTACAATTCAAACCCAAAAGTTGACTCTTACTTCTATTGATCTACTCACACTTTCTTGAAGAAAGAGAGAAGGTTGTTAAGATTCACTGACAAATCCTAATTGTCAGAGCAAAAAAATATTATATAATTTGTGAATTGGAGGCGAGGAAGAAATAGATTGTCCTTGTTAGACTTCTAAGACTTGCTCTCACTACCTTGGGAAGTAATCTTCCTCAAAACATTAGCCACAAGCATAAAGAGAAAACAAGATAGGAGATCACTTTGGCGAAGTCCTCTAGCATGGAATTTGGGATCCTTCCAATGGGTTTTCCATTAATAAACATAGAATATCCCACAAAGTAAATACAATTCCTAATTCTGGACCACCATTTATATTCAAAACCTTTATTTGCCATAACTTTGCCAAGAAAATTCCAATCCATATGATTGAACTATGCTTTATTAGCATTATGCATCTGATAGTTGTCAATTGCCTTATTAGTAGTCAAGGTTTGATCGAGAACTTTGTACCCTTTGATGAAATCATATTTGGAGTCGAAAATCGTAGTGGGAAGAACCTTTCTTAATCTATTAGACAAAACTTAGGCCACAACTCTTATAAACATTAGTAATGAGACTAATGGGTCTAAAGTCTCACATTTTTGTAGCCTTCTTTCTATTGTAGTATATATGGTGAAAAGAGATAAATCTAGTGAATAAGATGAATAGAACTCAACATGAGAGCAGGTTTTTGCTTTGATCACATTGTTGCTAGTTCACCCCCTTCTTTAACCACACTTTAGTTCTCCATCCATTCATTGCCCATGCGTTTTCCTCACAATACAACATATGAAGGTTAATTCTTGACTTTTATTCATGTTTTATTGTTAAAATTTTGTTTCTTTCCATAAAAGTGTTTTATCTTATACACCCATATTTTATGTTATTTTAAGTAAAACAAGTCCACACTTTTTTGTGCTCCTTGAGAGAGCCTTGCGACTTAGTGTGCCTTAGCCTATCTAAAAAGTCTGATTAGTGACTTCACTAAATTGGATTATTGGGGAGGTGAATGGAGACTAAGTTTTAGGTGGATATGATTTAAATCCTATAAACACCAACATCACCCACATTATCCTCTCTGTACACCACTAATGGAGAATAGAAGGAATAAACTAAAGTTGTTTGTGTTTTAATGCTTTATCGGTAGAAAACATGCAAATTTTGATATCTACGTATGAGCATTCATTTGGCCAACATAGGGGAATGATCATGAAGCTTTTATATTTTTTGTGCTTCCACTTTTGATTGGGTGTAATAAATTTTTTTTAGCACTTTGACATTTGGTGGGGAATTTAAAGCCTTGACCTCTTCGTCATAAATATTATTTCATGCTGGTTGCGATATATTCTTGTTGACTCAATTGGGCGTAATTGTGGGTTGGCTTTTAAGTAATTATATTGTGTTCGGACAACATGTGGAATGATCATTATGCTCTTAGTTTTGAGAGCAATTATCCTTTATTGCTTGCATAAAATATATTCACACTTGGTCTTTTTATATAGGAGAGAGACCTTTTACAATCATGGAAACATTACAACAATGGAAAGGAATAAATATGATAAATACAATTATCTTACAATTATGACAAATATTCTTAAATGGTAAGAATTCTAATATTCCTAAATAGTAAAGATTCCAACAATCTCCTTCAAGCTGGTTTAAAGATGTCTTCCATAGCCAGCTTGTCAATCAATCTATCGAAGTACTTCTTGCAAAGTCCTTTGGTTAATATATCAGCAGTTTGCTTTGACGTAGGAAGATAAGGAATACATATTATACTTGCATCAATCTTCTCTCTAATAAAGTGTTTATCAACCTCGATATGCTTTGTTCTATCATGTAAAATTGGATTATGAGCAATAGAGATCGCAAATTTGTTGTCACAATAAACACGTATAGGTGTCTCCAAAGGGACCTTTAGTTCTTCAAGTATCTTTTTTATCCATATCCCTTCACAAATTCCATGAGCCAAAGCTCTAAACTAAAGCACTACTCCTAGCTACTACATTTTGTTTTTTAGTTCTCTAAGTGACTAAGTTCCCTCCAACGAAGGAACAATAACCAGATATGGATCTTCTATCTGTAATACTTCCTGCCCAATCTGCATCAGTATAGACTTCTATTCGAAAATGATTTTGTTTTTTGAATTAAATACCTTTTCCAGGAGTTCCTTTTAGATACCTCAAAATTCTATAGGTAGCTTCAAAATGACTCGGTCCAAGTGAATGCATAAATTGACTTACCATACTCACGACATATGCAATATTAGGACGTGTATGAGATAGATAAAATTAACCTTCCTACAAGCCTTTGGTATCGTTCTTTATCTTTTATTTCTTTCGACTTTGCTGCTTGTAACTTCATATTGGGTTCACTAGGAGTTTCAGCGACCTTGCAACCAAGCAATCCAGTTTCTCCAAGTAAATCAAGAACATATTTTCTTTGATTTACGAAAATACCCTTCTTTGATCTTGCAAACTCCATTCCCAGAAAATACTTCAATAGTCCCAAATCCTTGATTTGAAATTCTCTTGCAAGATTTTTCTTGAGATCAGCTAGACCAATGTCATCATCACCCGTGAGTATAATATCATCTACATAGACAATCAGAATTGAGATTTTATTATTCTCACAATGTTTATAGAATATAGTATGATCTGCTTGACTTTGAAGAAATCCATAACTAGATACAACTTTTCCAAACCGTTCAAACCATGCTCTAGGAGACTGTTTTAGACCGTAAAGAGATTTCTTTAATTTGCAAGTTCTATTATATCCAAATTCTTTTTCAAACACATGGTGGCAAGTTCATGTAAACTTCCTCCTCGAGATCGCCATTAAGGAAGACATTTTTCACGTCAAGTTGGTAAAGAGGCCAATCTAAATTAGCTGCAAGTGACAAAAGACCTCTAATAGAGTTAATTTTAGCAACAGGAGCAAAAGTATCTTGATAGTCAATCCCATTAGTTTGAGTAAAGCCCTTAGCTTCCAGTCTAGCCTGGTATCTTTCAACACTTGCATCTGCATTACATTTAATTGTAAACACCCATTTACAACCCACTGACTTCTTATCTCTTGGCAATTCCTCAATTTTCCATGTCCCATTTTTTTTAGAGCATTCATTTCATCCATAACTGCTACTTTCCAATTTTTATCTTTTAATGCTTCATGTATATTTCTTGGAACAAATAAATCATTAATCCTAGATGTGAAGGCTCTATGATTATGATAGAAACTACCACACTATTTTATTAACTATGATAAATCTCTCGAGAGGATCTCTCAAAGAGCCAGAGTACAAAGATGATAACTGAATGCATGTCCTAGTGACCTACCATATCCTATTTATAGTAATCATAGGATTTAACCTAATTTAGTAAATAGCCCTAATAAGGCCCAAAAGCCCAATACAACTTAAATAGCTAAAAAAGAATTATATTTAATAATAATAATAAAATAGATCCGTCACTTCTTGGTCCGCCTTGAATAAACTTTCAAAGATCTCGGGATCGTATCAGATTATTTGACAAGTTTTGATATGACATGTAATTTGTAATAGGGTATTTCGTACAACTTCTAGTACCTTTCCTAATAGCTATGAGAACATCAAGATCAGGTACAATAGATAATGTATTTTGAATAGTCGAAGAAGTAGAAGGATGTTCAATTGACAAAATAGGCATGGAAGAAGGATTACCAAGTTTGTTAGTTTCATCTGTCAGAGTGTCGGATTGTAGTTGTGTAGGATCATCTATCTGGTCTTGGTTCCTTTGATTGAATTTTCTTCGAGTATTAAATTGTAACTCAGGAACTTGATCGATAGGATCATTTTGTAGTATTTCTCCCCCTGATTCAGAAGTTTCTACACTTGCCATAGAAGGACTACTATTTCTCTTCTAATATTTGTTTCTCCCCCTGAAGAGAGCTATGGGTAAAGTAAGGCTGATTTTCAAGAAAAGACACATCCATGATGACACATATTTTTTTGGTCTGAGGATCAAAACATTTATAACTTTTTTATTAGAAGAGTAACCCAAGAAAATACACTTAACAGCTCTATGGTGGAGTTTTGAGCGAAAATGATTAGGGATGTGAACATAAGTGGTACACCCAAAAACTTTGAGAGGCAAATCAGAGTATATGTGAGATGTTGGAAAAATAGTTTTAAAACAATCAATGGGAGTTTTAAAATTCAAGATCTTACTCAGTGCTTCAAAAATTGTTTGAGGCGTACGCCTTGAGGCGAGGCGGAGAGAAAATGCCTCGAGGCTTAAGCCTCACAAGGGAAAATTGAGGCGGCCGCCTCATAAGAGAAAGGCGAACGCCTTAGAGGCGAAAGGCGTATGCCTCTCCGTCAAATTGCCTTTTGTTTTCAAATTAGGGCTGGAAGTTTAAATTAGATGTAAAAACTTTTTATCCAGACAGTGGGCCATTCAAATAGGCCCATATTACATTTTAAAAATTATTTATTGGTTGACCTAAAAGCAAAGTGACTTACGGTGAAGACAAAAGGTAAAAAAAAATATTCGATATGATGACGACTCTATGGATGATCCTATTAGTGATAGTGAAAATGATAATGATTTTCTGGATGATCTTTAGAACACAATATTGATTGACTAGTTAGATTTTTTTATAGCGACATTTATATTGAGTTTTTTGTGTAGTTTTAAGGAGTATTACCTAGTTTAAATACAAAATGTTTTATCTTTTTTGATTAAAATATGTTTCTTTAAATTTTTAAATGAGGCTTACGCCTCATTACGCCTCGAGGCCGCCTCACGCCTTTTAAAACATTGATCTTACTAGGCATCCTATTTATGAGGTAAGTAGCTGTAACAATAACTTCACCCCATAAATATTTTGAAACATGCATAGAAAACATTATTGCACGAGCAACTTCAAGTAAATGCCTATTTTTTCTTTTAGCAATCCCATTCTGTTGAGGAGTATCTCGACAAGTAGAGTGATGAATACCTTTTTTGTTTATGAAATTACCCAAAAATTCATTAAAATACTCAGTTCCATTATCAGAGTGTAAGTGCAAATTTTGGCTTGAAATTGGGTTTCAATCATAATATAAAATATTTGAAAAATATCTTTCACCTCAGATTTTTTTTCCCATTAAATAAACCCAAGAAAGACGAGTATGGTCGTCAATGAATGTAACAAACCATCGTTTTCCACTATGAGTCCTAATTTTAGAAGCACCCCAAACATCATTATGTATTAGATAAAAAGGTTTTGGAAGCTTTGTAAGGTTTTGGCAAATATGTGGAACTATGATTTTTCGCTAAAATGCAACGTTCGCAATATAATGAGGAGCAATTGATTCCCTTAAATAAATTTGGAAACACATGCTTGAGATAAGAAAAATTAGGATGTCCTAACCTATGATGCCAAAGCATGATCTATTCTTTACCAGGGAGAGAACTAATGATACTTAGACTTTGAGTTATTTTATTGCTAAAAGAACCTTCATCAAAGTAGTAGAGACCATCAAGCATCCTAGCACTCCCAATCATCCTCTTTGGTTTCCGATCCTGAAAAATACAGTTAGATTCAAAGAAAATGACCCGAAAATTAGAATCTCTAGAAAGCATACTGACAGATAAAAGATTGCAGGCTAATTTAGGAATATGGAGAACAGACTGCAAGGATATTTTGTCCGTCAATGTAATAGTTCCTTTTCCTGCAATGGAAGAAAAACTGCCATCTGCAATTCAAATTTTTTCATTAGTATATGAAGGAGAGTACGAATGAAATAGTTGAGAGATACTTGTCATATGATCAGAAGCTCCAGAATCTATAATCCACGGGGAAGAGTTATCTCAAGAAAGAGCTTGAGGATAATTTATTTGTATGTTCCAAAGATACACATAAATTATTAGAATGTAAATTGAGCAATAGTAATTGTGAATAAATATGCTCCATGCCAAAGAAAACGAATTATAGAAAAATTGAGATTAAAAAAAAAAAGGTTATTGTAGCAAACCGAGCACTGTAGCAAACCAGGTATTGTAACAAACCGAGCACTGTAGCAAACCAGGTATTGTAACAAACCGAGCACTGTAGCAACCAGACACACGGTAGCAACCCTATACTGTTCCATTTATATATATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATGTTAAAAAATATACAAACCCAAATGAGAAAAAATAGACTTGAGTGGTTCTATAAAATAACCAAAAGAAAAATTGATACACCTCGCACCGTGTGATAATCTGATGTAAAGCCACAAATAAACAGCCGAACGGAAAAATCACGAATGGGCTGACAAGCAACTTGAACAGATGTAAGAATCACCTCGTTGTAGATGTTGAACGAATAGATGAAGGAGAAATATGTGAGGAAACCCCGGAAGTAGGATGCGTCGTTTTAGAGACGACGACTAGGGTTCCGATTGGAGTTTCTAAAATTTCCGCTCTGATACCATCTTAGTTTTGAGAGCAATTATCATGTATTGCTTGCATAAAATATATTTACACTAGGTCTTCTTATATAGGAGAGAGACCTTTTACTATCATGGAAACATTACAACAATGGAAAGGAATAAATATGATAAATAAAATTATCTTACAATTATGACAAATATTCTTAAATGGTAAGAATTCTAATATTCCTAAATGGTAAAGATTCCAACCATGCTACATGTGTGAAGTTGAACATATTAACCACAATCTGTGGTGTTTTTTCTATTCTATATGCATAAATTATTATTACGTTTTAATTCTTGTTTTTGTAGTTAAAAATACCCACATTTTCTTTGCCCATTGCAGTACTACTTCGATACTCTTTTCCCTCGTATTCCAGTTCCTGTCTTGCGGCAAGTTGTAACGAGTCTGGAAAAATTGAAACTTCCCAGTAAACATTCTGGTGTGACAGGAGAAACACATCGAATGGGGTCTGAAGACACCGCACGACGGCCACCTTCGGTAAAAGCTTCACTTTCAGTTTCCTTTGGACAACGAGCACCACACCGTGCCTCAACTAGGGACTCATCCCCAGTTCGTCGTACAATACAACCATCAATTAATGATAGAGATACTGGTTCTGATCTACGAAGATCTCCAAGTAATCACCGAAGTGAAAGTCGTGAACAACCAGATAATAGGGATAGTAGGGACAGAGAATTTGATAGAGAGAGTAGGGATAGAGAATTCGAAAGGGAGAGGAGCAGGGATAGAGATTACGACAGGGACAGAGGCAGGGACAGGGACAGAGATCGAGATCGGAATAGAGGGAAGCATATAGATCGGGAGAGGGAAAGAGAGAAATATAGGGATAGGGATAGGGAGAGAGAGCGAGATAGAGAAAGAAGTTATGATTATGATCGAAGGACTCATTATGCTGATAGAGATAGTAGAAGGGACTATGAAAGAAGTTGCCGTGAGGGTGATAATGACAGGCATTATCGAAGGAGTCGTAGCCGAAGTAGGAGCAGGAGCAGAAACTTACAAACAGGGAATGTCCAGGGCCACGAGCGAGAACCAAGTTCTGTAAGAGGTGGGGCTACAGAGAAAACGTCTGTTATATCGAGCAACCTGGCAAAGCTTAAAGATATGTATGGCGATGTGAGCGAGCAGAAAGGGGATTCAAGCAAAGACCGATTTAATAGAAAGGATAGTAGTGGTGAAGAGGTGATTAGACTGGGTGGTTCCTGGAAATAG

mRNA sequence

ATGGAGATAAAGACTTCTGAGAAGCCAATTGATTCTTTGCTGGAGAAGGTTCTATGTATGAATATTCTGTCTTCTGATTACTTTAAGGAGCTTTATCGTTTGAAGACATACCATGAAGTGGTCGATGAAATTTATAACCAAGTTGATCATGTAGAGCCATGGATGACTGGTAACTGCCGTGGTCCTTCAACAGCATTCTGCCTTTTGTACAAATTTTTCACTATGAAACTTACTGTGAAGCAAATGCATGGGCTGTTAAATCACGAGGATTCTCCTTACATCAGAGCGTTATCTAAGATTGGATTCCTCTACTTGAGATATGTTGCAGATCCGAAGACTCTCTGGAATTGGTTTGAACCTTATGTTAAAGATGAAGAGGAATTTTCACCGGGATTCAATGGTCGAATGGCTACAATGGGTGCTTATGTGCGCGATTTGCTCCTTGGACAGTACTACTTCGATACTCTTTTCCCTCGTATTCCAGTTCCTGTCTTGCGGCAAGTTGTAACGAGTCTGGAAAAATTGAAACTTCCCAGTAAACATTCTGGTGTGACAGGAGAAACACATCGAATGGGGTCTGAAGACACCGCACGACGGCCACCTTCGGTAAAAGCTTCACTTTCAGTTTCCTTTGGACAACGAGCACCACACCGTGCCTCAACTAGGGACTCATCCCCAGTTCGTCGTACAATACAACCATCAATTAATGATAGAGATACTGGTTCTGATCTACGAAGATCTCCAAGTAATCACCGAAGTGAAAGTCGTGAACAACCAGATAATAGGGATAGTAGGGACAGAGAATTTGATAGAGAGAGTAGGGATAGAGAATTCGAAAGGGAGAGGAGCAGGGATAGAGATTACGACAGGGACAGAGGCAGGGACAGGGACAGAGATCGAGATCGGAATAGAGGGAAGCATATAGATCGGGAGAGGGAAAGAGAGAAATATAGGGATAGGGATAGGGAGAGAGAGCGAGATAGAGAAAGAAGTTATGATTATGATCGAAGGACTCATTATGCTGATAGAGATAGTAGAAGGGACTATGAAAGAAGTTGCCGTGAGGGTGATAATGACAGGCATTATCGAAGGAGTCGTAGCCGAAGTAGGAGCAGGAGCAGAAACTTACAAACAGGGAATGTCCAGGGCCACGAGCGAGAACCAAGTTCTGTAAGAGGTGGGGCTACAGAGAAAACGTCTGTTATATCGAGCAACCTGGCAAAGCTTAAAGATATGTATGGCGATGTGAGCGAGCAGAAAGGGGATTCAAGCAAAGACCGATTTAATAGAAAGGATAGTAGTGGTGAAGAGGTGATTAGACTGGGTGGTTCCTGGAAATAG

Coding sequence (CDS)

ATGGAGATAAAGACTTCTGAGAAGCCAATTGATTCTTTGCTGGAGAAGGTTCTATGTATGAATATTCTGTCTTCTGATTACTTTAAGGAGCTTTATCGTTTGAAGACATACCATGAAGTGGTCGATGAAATTTATAACCAAGTTGATCATGTAGAGCCATGGATGACTGGTAACTGCCGTGGTCCTTCAACAGCATTCTGCCTTTTGTACAAATTTTTCACTATGAAACTTACTGTGAAGCAAATGCATGGGCTGTTAAATCACGAGGATTCTCCTTACATCAGAGCGTTATCTAAGATTGGATTCCTCTACTTGAGATATGTTGCAGATCCGAAGACTCTCTGGAATTGGTTTGAACCTTATGTTAAAGATGAAGAGGAATTTTCACCGGGATTCAATGGTCGAATGGCTACAATGGGTGCTTATGTGCGCGATTTGCTCCTTGGACAGTACTACTTCGATACTCTTTTCCCTCGTATTCCAGTTCCTGTCTTGCGGCAAGTTGTAACGAGTCTGGAAAAATTGAAACTTCCCAGTAAACATTCTGGTGTGACAGGAGAAACACATCGAATGGGGTCTGAAGACACCGCACGACGGCCACCTTCGGTAAAAGCTTCACTTTCAGTTTCCTTTGGACAACGAGCACCACACCGTGCCTCAACTAGGGACTCATCCCCAGTTCGTCGTACAATACAACCATCAATTAATGATAGAGATACTGGTTCTGATCTACGAAGATCTCCAAGTAATCACCGAAGTGAAAGTCGTGAACAACCAGATAATAGGGATAGTAGGGACAGAGAATTTGATAGAGAGAGTAGGGATAGAGAATTCGAAAGGGAGAGGAGCAGGGATAGAGATTACGACAGGGACAGAGGCAGGGACAGGGACAGAGATCGAGATCGGAATAGAGGGAAGCATATAGATCGGGAGAGGGAAAGAGAGAAATATAGGGATAGGGATAGGGAGAGAGAGCGAGATAGAGAAAGAAGTTATGATTATGATCGAAGGACTCATTATGCTGATAGAGATAGTAGAAGGGACTATGAAAGAAGTTGCCGTGAGGGTGATAATGACAGGCATTATCGAAGGAGTCGTAGCCGAAGTAGGAGCAGGAGCAGAAACTTACAAACAGGGAATGTCCAGGGCCACGAGCGAGAACCAAGTTCTGTAAGAGGTGGGGCTACAGAGAAAACGTCTGTTATATCGAGCAACCTGGCAAAGCTTAAAGATATGTATGGCGATGTGAGCGAGCAGAAAGGGGATTCAAGCAAAGACCGATTTAATAGAAAGGATAGTAGTGGTGAAGAGGTGATTAGACTGGGTGGTTCCTGGAAATAG

Protein sequence

MEIKTSEKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCRGPSTAFCLLYKFFTMKLTVKQMHGLLNHEDSPYIRALSKIGFLYLRYVADPKTLWNWFEPYVKDEEEFSPGFNGRMATMGAYVRDLLLGQYYFDTLFPRIPVPVLRQVVTSLEKLKLPSKHSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTIQPSINDRDTGSDLRRSPSNHRSESREQPDNRDSRDREFDRESRDREFERERSRDRDYDRDRGRDRDRDRDRNRGKHIDREREREKYRDRDRERERDRERSYDYDRRTHYADRDSRRDYERSCREGDNDRHYRRSRSRSRSRSRNLQTGNVQGHEREPSSVRGGATEKTSVISSNLAKLKDMYGDVSEQKGDSSKDRFNRKDSSGEEVIRLGGSWK
Homology
BLAST of Sed0006929 vs. NCBI nr
Match: XP_038875168.1 (pre-mRNA splicing factor SR-like 1 isoform X1 [Benincasa hispida] >XP_038875169.1 pre-mRNA splicing factor SR-like 1 isoform X1 [Benincasa hispida])

HSP 1 Score: 690.3 bits (1780), Expect = 1.1e-194
Identity = 381/458 (83.19%), Postives = 407/458 (88.86%), Query Frame = 0

Query: 1   MEIKTSEKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKT  KPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLNHEDSPYIRALSKIGFLYLRYVADPKTLWNWFEP 120
           GPSTAFCLLYKFFTMKLTVKQMHGLL HEDSPYIRA   IGFLYLRYVADPKTLW WFEP
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA---IGFLYLRYVADPKTLWTWFEP 120

Query: 121 YVKDEEEFSPGFNGRMATMGAYVRDLLLGQYYFDTLFPRIPVPVLRQVVTSLEKLKLPSK 180
           YVKDEEEFSPG +GRM TMG YVRDLLLGQYYFDTLFPRIPVPVLRQVV +LEKLKLPSK
Sbjct: 121 YVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVANLEKLKLPSK 180

Query: 181 HSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTIQPSINDRDT 240
           HSGVTGETHR+GSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT+ PS NDRD 
Sbjct: 181 HSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSANDRDN 240

Query: 241 GSDLRRSPSNHRSESREQPDNRD-SRDREFDRE-SRDREFERERSRDRDYDRDRGRDRDR 300
             DLRRSPS+ RS+SRE PD+R+ SRDR++DRE SRDR+++RERSRDRD+DRDR R RDR
Sbjct: 241 SDDLRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDYDRERSRDRDHDRDRDRGRDR 300

Query: 301 DRDRN--------RGKHIDREREREKYRDRDRERERDRERSYDYDRRTHYADRDSRRDYE 360
           DRDR         R +  DR+RERE+ RDR+R+RERDRERSYDYDRRTHY DR+SRRD+E
Sbjct: 301 DRDREYDRDREKYRDRERDRDRERERARDRERDRERDRERSYDYDRRTHYNDRESRRDFE 360

Query: 361 RSCREGDNDRHYR--RSRSRSRSRSRNLQTGNVQGHEREPSSVRGGATEKTSVISSNLAK 420
           RS R+G   RHYR  RSRSRSRSRSR+LQTGN   HEREPS  RGG TEKTS ISSNLAK
Sbjct: 361 RSSRDG-GSRHYRRSRSRSRSRSRSRSLQTGNAH-HEREPSPARGGTTEKTSSISSNLAK 420

Query: 421 LKDMYGDVSEQKGDSSKDRFNRKDSSGEEVIRLGGSWK 447
           LKD+YGDVSEQKGDSSK+R NR+DSSGEEVIRLGG WK
Sbjct: 421 LKDIYGDVSEQKGDSSKERVNRRDSSGEEVIRLGGYWK 453

BLAST of Sed0006929 vs. NCBI nr
Match: XP_022993767.1 (pre-mRNA splicing factor SR-like 1 [Cucurbita maxima])

HSP 1 Score: 678.7 bits (1750), Expect = 3.4e-191
Identity = 382/462 (82.68%), Postives = 408/462 (88.31%), Query Frame = 0

Query: 1   MEIKTSEKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKT  KPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLNHEDSPYIRALSKIGFLYLRYVADPKTLWNWFEP 120
           GPSTAFCLLYKFFTMKLTVKQMHGLL HEDSPYIRA   IGFLYLRYVADPKTLWNW EP
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA---IGFLYLRYVADPKTLWNWVEP 120

Query: 121 YVKDEEEFSPGFNGRMATMGAYVRDLLLGQYYFDTLFPRIPVPVLRQVVTSLEKLKLPSK 180
           YVKDEEEFSPG +GRM TMG YVRDLLLGQYYFDTLFPRIPVPVLRQVV +LEKLKLPSK
Sbjct: 121 YVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVANLEKLKLPSK 180

Query: 181 HSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTIQPSINDRDT 240
           HSGVTGETHR+GSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT+  S  DRD 
Sbjct: 181 HSGVTGETHRLGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPTSAIDRDN 240

Query: 241 GSDLRRSPSNHRSESREQPDNRD-SRDREFDRE-SRDREFERERSRDRDYDRDRGRDRDR 300
             DLRRSPS+ RS+SRE PD R+ SRDR++DRE SRDR+++RERSRDR+YDRDRGRDRDR
Sbjct: 241 SDDLRRSPSSRRSQSREHPDTRERSRDRDYDRERSRDRDYDRERSRDREYDRDRGRDRDR 300

Query: 301 DR--DRNRGKHIDRE------REREKYRDRDRERERDRERSYDYDRRTHYADRDSRRDYE 360
           +R  DR+R K+ DRE      REREK RDR+R+RERDRERSYDYDRRTHY DR+ RRD+E
Sbjct: 301 EREHDRDREKYRDRERDRERDREREKARDRERDRERDRERSYDYDRRTHYTDREGRRDFE 360

Query: 361 RSCREGDNDRHYRRSRSRSRSR--SRNLQTG-NVQG-HEREPSSVRGGATEKTSVISSNL 420
           RS R+G   RHYRRSRSRSRSR  SR+LQTG N  G HEREPS  RG  +EKTS+ISSNL
Sbjct: 361 RSSRDG-GTRHYRRSRSRSRSRSSSRSLQTGVNAHGHHEREPSPARGRTSEKTSIISSNL 420

Query: 421 AKLKDMYGDVSEQK--GDSSKDRFNRKDSSGEEVIRLGGSWK 447
           AKLKDMYGDVSEQK  GD SK+R NR+DSSGEEVIRLGGSWK
Sbjct: 421 AKLKDMYGDVSEQKGGGDPSKERINRRDSSGEEVIRLGGSWK 458

BLAST of Sed0006929 vs. NCBI nr
Match: TYK18924.1 (pre-mRNA-splicing factor 38B [Cucumis melo var. makuwa])

HSP 1 Score: 677.2 bits (1746), Expect = 9.9e-191
Identity = 381/478 (79.71%), Postives = 408/478 (85.36%), Query Frame = 0

Query: 1   MEIKTSEKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKT  KPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLNHEDSPYIRALSKIGFLYLRYVADPKTLWNWFEP 120
           GPSTAFCLLYKFFTMKLTVKQMHGLL HEDSPYIRA   IGFLYLRYVADPKTLWNWFEP
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA---IGFLYLRYVADPKTLWNWFEP 120

Query: 121 YVKDEEEFSPGFNGRMATMGAYVRDLLLGQYYFDTLFPRIPVPVLRQVVTSLEKLKLPSK 180
           YVKD+EEFSPG +GRM TMG YVRDLLLGQYYFDTLFPRIPVPVLRQVV++LEKLKLPSK
Sbjct: 121 YVKDDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSK 180

Query: 181 HSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTIQPSINDRDT 240
           HSGVTGETHR+GSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT+  S+NDRD 
Sbjct: 181 HSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSVNDRDI 240

Query: 241 GSDLRRSPSNHRSESREQPDNRD-----------SRDREFDRE-SRDREFERERSRDRDY 300
             DLRRSPSN RS+SRE PD+R+           SRDRE+DRE SRDR+++RERSRDRDY
Sbjct: 241 NDDLRRSPSNRRSQSREHPDSRERSRDREYDRERSRDREYDRERSRDRDYDRERSRDRDY 300

Query: 301 DRDRGRDRDRDRDRNRG------------------KHIDREREREKYRDRDRERERDRER 360
           DR+R RDRD DRDR+RG                  +  DR+REREK RDR+R+RERDRER
Sbjct: 301 DRERSRDRDYDRDRDRGRDRDRDRELDRDREKYRDRERDRDREREKARDRERDRERDRER 360

Query: 361 SYDYDRRTHYADRDSRRDYERSCREGDNDRHYRRSRSRSRSRS--RNLQTGNVQGHEREP 420
           SYDYDRRTHY+DR+SRRD+ERS R+G   RHYRRSRSRSRSRS  R+LQT     HERE 
Sbjct: 361 SYDYDRRTHYSDRESRRDFERSSRDG-GTRHYRRSRSRSRSRSRGRSLQT----HHEREQ 420

Query: 421 SSVRGGATEKTSVISSNLAKLKDMYGDVSEQKGDSSKDRFNRKDSSGEEVIRLGGSWK 447
           S  RGG TEK SVISSNLAKLKD+YGDVSEQKGDSSK   NR+DSSGEEVIRLGGSWK
Sbjct: 421 SPARGGTTEKASVISSNLAKLKDIYGDVSEQKGDSSK--INRRDSSGEEVIRLGGSWK 468

BLAST of Sed0006929 vs. NCBI nr
Match: XP_022141497.1 (pre-mRNA splicing factor SR-like 1 isoform X1 [Momordica charantia] >XP_022141498.1 pre-mRNA splicing factor SR-like 1 isoform X1 [Momordica charantia])

HSP 1 Score: 673.7 bits (1737), Expect = 1.1e-189
Identity = 376/467 (80.51%), Postives = 407/467 (87.15%), Query Frame = 0

Query: 1   MEIKTSEKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKT  KPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLNHEDSPYIRALSKIGFLYLRYVADPKTLWNWFEP 120
           GPSTAFCLLYKFFTMKLTVKQMHGLL HEDSPYIRA   IGFLYLRYVADPKTLWNWFEP
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA---IGFLYLRYVADPKTLWNWFEP 120

Query: 121 YVKDEEEFSPGFNGRMATMGAYVRDLLLGQYYFDTLFPRIPVPVLRQVVTSLEKLKLPSK 180
           YVKDEEEFSPG +GRM TMG YVRDLLLGQYYFDTLFPRIPVPVLRQVV +LEKLKLPSK
Sbjct: 121 YVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVANLEKLKLPSK 180

Query: 181 HSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTIQPSINDRDT 240
           HSGVTGETHR+GSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT+ PS ND+D 
Sbjct: 181 HSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSANDKDN 240

Query: 241 GSDLRRSPSNHRSESREQPDNRD-SRDREFDRE-SRDREFERERSRDRDYDRDRGRDRDR 300
           G D+RRSPS+ RS+SRE PDN + SRDR++DRE SRDR+ +R+RSRDRD+DRDRGRDRDR
Sbjct: 241 GDDVRRSPSSRRSQSREHPDNGERSRDRDYDRERSRDRDHDRDRSRDRDHDRDRGRDRDR 300

Query: 301 DRDRNRGKHIDREREREKYRDRD----------------RERERDRERSYDYDRRTHYAD 360
           DRDR+R K+ DRER+R++ RDRD                RER+RDRERSYDYDRR+HYAD
Sbjct: 301 DRDRDREKYRDRERDRDRDRDRDRDRDRERERERERVRERERDRDRERSYDYDRRSHYAD 360

Query: 361 RDSRRDYERSCREGDNDRHYR--RSRSRSRSRSRNLQTGNVQGHEREPSSVRGGATEKTS 420
           RDSRRDYE+S R+ D  RHYR  RSRSRSRSRSR+LQT N   HER PS VR G T+KTS
Sbjct: 361 RDSRRDYEKSSRD-DGSRHYRRSRSRSRSRSRSRSLQTVNAH-HERVPSPVRDGNTDKTS 420

Query: 421 VISSNLAKLKDMYGDVSEQKGDSSKDRFNRKDSSGEEVIRL-GGSWK 447
            ISSNLAKLKD+YGDVS+QKGD SK+R  ++D SGEEV RL GGSWK
Sbjct: 421 NISSNLAKLKDIYGDVSDQKGDCSKERVPKRDGSGEEVFRLGGGSWK 462

BLAST of Sed0006929 vs. NCBI nr
Match: KAA0046277.1 (pre-mRNA-splicing factor 38B [Cucumis melo var. makuwa])

HSP 1 Score: 673.3 bits (1736), Expect = 1.4e-189
Identity = 381/488 (78.07%), Postives = 408/488 (83.61%), Query Frame = 0

Query: 1   MEIKTSEKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKT  KPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLNHEDSPYIRALSKIGFLYLRYVADPKTLWNWFEP 120
           GPSTAFCLLYKFFTMKLTVKQMHGLL HEDSPYIRA   IGFLYLRYVADPKTLWNWFEP
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA---IGFLYLRYVADPKTLWNWFEP 120

Query: 121 YVKDEEEFSPGFNGRMATMGAYVRDLLLGQYYFDTLFPRIPVPVLRQVVTSLEKLKLPSK 180
           YVKD+EEFSPG +GRM TMG YVRDLLLGQYYFDTLFPRIPVPVLRQVV++LEKLKLPSK
Sbjct: 121 YVKDDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSK 180

Query: 181 HSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTIQPSINDRDT 240
           HSGVTGETHR+GSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT+  S+NDRD 
Sbjct: 181 HSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSVNDRDI 240

Query: 241 GSDLRRSPSNHRSESREQPDNRD-----------SRDREFDRE-----------SRDREF 300
             DLRRSPSN RS+SRE PD+R+           SRDRE+DRE           SRDR++
Sbjct: 241 NDDLRRSPSNRRSQSREHPDSRERSRDREYDRERSRDREYDRERSRDRDYDRERSRDRDY 300

Query: 301 ERERSRDRDYDRDRGRDRDRDRDRNRG------------------KHIDREREREKYRDR 360
           +RERSRDRDYDR+R RDRD DRDR+RG                  +  DR+REREK RDR
Sbjct: 301 DRERSRDRDYDRERSRDRDYDRDRDRGRDRDRDRELDRDREKYRDRERDRDREREKARDR 360

Query: 361 DRERERDRERSYDYDRRTHYADRDSRRDYERSCREGDNDRHYRRSRSRSRSRS--RNLQT 420
           +R+RERDRERSYDYDRRTHY+DR+SRRD+ERS R+G   RHYRRSRSRSRSRS  R+LQT
Sbjct: 361 ERDRERDRERSYDYDRRTHYSDRESRRDFERSSRDG-GTRHYRRSRSRSRSRSRGRSLQT 420

Query: 421 GNVQGHEREPSSVRGGATEKTSVISSNLAKLKDMYGDVSEQKGDSSKDRFNRKDSSGEEV 447
                HERE S  RGG TEK SVISSNLAKLKD+YGDVSEQKGDSSK   NR+DSSGEEV
Sbjct: 421 ----HHEREQSPARGGTTEKASVISSNLAKLKDIYGDVSEQKGDSSK--INRRDSSGEEV 478

BLAST of Sed0006929 vs. ExPASy Swiss-Prot
Match: Q8RWB1 (Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis thaliana OX=3702 GN=SRL1 PE=1 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 2.6e-125
Identity = 278/451 (61.64%), Postives = 321/451 (71.18%), Query Frame = 0

Query: 2   EIKTSEKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCRG 61
           EI+++ +  +SLLEKVL MNILSSDYFKELY LKTYHEV+DEIYNQV+HVEPWM GNCRG
Sbjct: 3   EIQSNGRAYESLLEKVLSMNILSSDYFKELYGLKTYHEVIDEIYNQVNHVEPWMGGNCRG 62

Query: 62  PSTAFCLLYKFFTMKLTVKQMHGLLNHEDSPYIRALSKIGFLYLRYVADPKTLWNWFEPY 121
           PSTA+CLLYKFFTMKLTVKQMHGLL H DSPYIRA   +GFLYLRYVAD KTLW W+EPY
Sbjct: 63  PSTAYCLLYKFFTMKLTVKQMHGLLKHTDSPYIRA---VGFLYLRYVADAKTLWTWYEPY 122

Query: 122 VKDEEEFSPGFNGRMATMGAYVRDLLLGQYYFDTLFPRIPVPVLRQVVTSLEKLKLPSKH 181
           +KD+EEFSPG NGRM TMG YVRDLLLG YYFDTLFPRIPVPV+RQ+V++LEK+ LP+K 
Sbjct: 123 IKDDEEFSPGSNGRMTTMGVYVRDLLLGLYYFDTLFPRIPVPVMRQIVSNLEKMNLPTKP 182

Query: 182 SGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTIQPSINDRDTG 241
           SG TG+  R GSEDTARRPPSVKASLSVSFGQRAPHRASTR SSPVRR   P+  DR+ G
Sbjct: 183 SGSTGDMTR-GSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPVRRP-PPTGYDRNGG 242

Query: 242 SDL-RRSPSNHRSESREQPDNRDSRDREFDRESRDREFERERSRDRDYDRDRGRDRDRDR 301
            ++ +RSP                                 RS+ RDY  DR  DR R+R
Sbjct: 243 DEVQQRSP--------------------------------RRSQSRDYYSDRDSDRQRER 302

Query: 302 DRNRGKHIDREREREKYRDRDRERERDRERSYDYDRRTH--YADRDSRRDYERSCREGDN 361
           +R      +++RERE+ RDR RERERD    Y  DRR+   Y  R  R DY     E D 
Sbjct: 303 ER------EKDRERERGRDRYRERERD----YGNDRRSRRDYDSRSRRNDY-----EDDR 362

Query: 362 DRHYRRSRSRSRSRSRNLQTGNVQGHEREPSSVRGGATEKTS--VISSNLAKLKDMYGDV 421
            RH RRSRSRSRSRSR++Q       EREP+  R  + ++ S   ++SNLAKLKD+YGD 
Sbjct: 363 SRHDRRSRSRSRSRSRSVQI------EREPTPKRDSSNKEKSAVTVNSNLAKLKDLYGDA 393

Query: 422 SEQKGDSSKDRFNRKDSSGEEVIRLGG-SWK 447
           S QK D       RKDSS EEVI+LGG SW+
Sbjct: 423 SSQKRDEGFG--TRKDSSSEEVIKLGGSSWR 393

BLAST of Sed0006929 vs. ExPASy Swiss-Prot
Match: Q6AXY7 (Pre-mRNA-splicing factor 38B OS=Rattus norvegicus OX=10116 GN=Prpf38b PE=1 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.4e-46
Identity = 178/486 (36.63%), Postives = 244/486 (50.21%), Query Frame = 0

Query: 14  LEKVLCMNILSSDYFK-ELYRLKTYHEVVDEIYNQVDHVEPW---------MTGNCRG-- 73
           L  ++  NILSS YFK +LY LKTYHEVVDEIY +V HVEPW          TG C G  
Sbjct: 58  LNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVR 117

Query: 74  -------PSTAFCLLYKFFTMKLTVKQMHGLLNHEDSPYIRALSKIGFLYLRYVADPKTL 133
                   STAFCLLYK FT+KLT KQ+ GL+ H DSPYIRAL   GF+Y+RY   P  L
Sbjct: 118 GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRAL---GFMYIRYTQPPTDL 177

Query: 134 WNWFEPYVKDEEEFS-PGFNGRMATMGAYVRDLLLGQYYFDTLFPRIPVPVLRQVVTSLE 193
           W+WFE ++ DEE+       G + T+G  +R  L    +F TLFPRIPVPV + +   ++
Sbjct: 178 WDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIK 237

Query: 194 KLKLPSKHSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTR----------- 253
                 K  G  G    +      RR  S + SLS    +R+P R+ +R           
Sbjct: 238 TRPRKIKKDGKEG-VEEIDRHIERRRSRSPRRSLS---PRRSPRRSRSRSHHRDGHGSSS 297

Query: 254 -----DSSPVRRTIQPSINDR----------DTGSDLRRSPSNHRSESREQPDNRDSRDR 313
                +    R+ ++    +R          D G D RRS S  R  SR +     SRDR
Sbjct: 298 FDRELEREKERQRLEREAKEREKERRRSRSLDRGLDRRRSRSRERHRSRSR-----SRDR 357

Query: 314 EFDRESRDREFERE----RSRDRDYDRDRGRDRDRDRDRNR-----------GKHIDRER 373
           + DR  RDRE E+E    R RDRDYD+DRG DR+RDR+R+R           G+    + 
Sbjct: 358 KGDRRDRDREREKENERGRRRDRDYDKDRGNDRERDRERSRERSKEQRSRGEGEEKKHKE 417

Query: 374 EREKYRDRDRERERDRERSYDYDRRTHYADRDSRRDYERSCREGDND---RHYRRSRSRS 433
           ++E  R RD ++E  ++ S    R   +  R   R+  +  R    D   +H   S+ +S
Sbjct: 418 DKEDRRHRDDKKESKKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKDKASKHKNESKEKS 477

BLAST of Sed0006929 vs. ExPASy Swiss-Prot
Match: Q5VTL8 (Pre-mRNA-splicing factor 38B OS=Homo sapiens OX=9606 GN=PRPF38B PE=1 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 5.3e-46
Identity = 174/459 (37.91%), Postives = 246/459 (53.59%), Query Frame = 0

Query: 14  LEKVLCMNILSSDYFK-ELYRLKTYHEVVDEIYNQVDHVEPW---------MTGNCRG-- 73
           L  ++  NILSS YFK +LY LKTYHEVVDEIY +V HVEPW          TG C G  
Sbjct: 58  LNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVR 117

Query: 74  -------PSTAFCLLYKFFTMKLTVKQMHGLLNHEDSPYIRALSKIGFLYLRYVADPKTL 133
                   STAFCLLYK FT+KLT KQ+ GL+ H DSPYIRAL   GF+Y+RY   P  L
Sbjct: 118 GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRAL---GFMYIRYTQPPTDL 177

Query: 134 WNWFEPYVKDEEEFS-PGFNGRMATMGAYVRDLLLGQYYFDTLFPRIPVPVLRQVVTSLE 193
           W+WFE ++ DEE+       G + T+G  +R  L    +F TLFPRIPVPV + +   ++
Sbjct: 178 WDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIK 237

Query: 194 KLKLPSKHSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTIQP 253
                 K  G  G    +      RR  S + SLS    +R+P R+ +R  S  R     
Sbjct: 238 TRPRKIKKDGKEG-AEEIDRHVERRRSRSPRRSLS---PRRSPRRSRSR--SHHREGHGS 297

Query: 254 SINDRDTGSDLRRSPSNHRSESREQPDNRD-SRDREFDR---ESRDREFERERSRDRDYD 313
           S  DR+   +  R      ++ RE+   R  S DR  +R    SR+R   R RSRDR  D
Sbjct: 298 SSFDRELEREKERQRLEREAKEREKERRRSRSIDRGLERRRSRSRERHRSRSRSRDRKGD 357

Query: 314 RDRGRDRDRDRDRNRGKHIDREREREKYRDRDRERERDRERSY------DYDRRTHYADR 373
           R R RDR+R+++  RG+  DR+ ++E+  +R++ERER RERS       + + + H  D+
Sbjct: 358 R-RDRDREREKENERGRRRDRDYDKERGNEREKERERSRERSKEQRSRGEVEEKKHKEDK 417

Query: 374 DSRRDYERSCREGDNDRHYRRSRS-----RSRSRSRNLQTGNVQGHEREPSSVRGGATEK 433
           D RR +    R+   ++ + RSRS     RSRSRSRN    +    + + S  +  + EK
Sbjct: 418 DDRR-HRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEK 477

Query: 434 TSVISSNLAKLKDMYGDVSEQKGDSSKDRFNRKDSSGEE 438
           ++  S + ++ +    + S+++  S     +RK S  +E
Sbjct: 478 SNKRSRSGSQGRTDSVEKSKKREHSPSKEKSRKRSRSKE 505

BLAST of Sed0006929 vs. ExPASy Swiss-Prot
Match: Q80SY5 (Pre-mRNA-splicing factor 38B OS=Mus musculus OX=10090 GN=Prpf38b PE=1 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 7.6e-45
Identity = 173/453 (38.19%), Postives = 237/453 (52.32%), Query Frame = 0

Query: 14  LEKVLCMNILSSDYFK-ELYRLKTYHEVVDEIYNQVDHVEPW---------MTGNCRG-- 73
           L  ++  NILSS YFK +LY LKTYHEVVDEIY +V HVEPW          TG C G  
Sbjct: 59  LNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVR 118

Query: 74  -------PSTAFCLLYKFFTMKLTVKQMHGLLNHEDSPYIRALSKIGFLYLRYVADPKTL 133
                   STAFCLLYK FT+KLT KQ+ GL+ H DSPYIRAL   GF+Y+RY   P  L
Sbjct: 119 GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRAL---GFMYIRYTQPPTDL 178

Query: 134 WNWFEPYVKDEEEFS-PGFNGRMATMGAYVRDLLLGQYYFDTLFPRIPVPVLRQVVTSLE 193
           W+WFE ++ DEE+       G + T+G  +R  L    +F TLFPRIPVPV + +   ++
Sbjct: 179 WDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIK 238

Query: 194 KLKLPSKHSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTIQP 253
                 K  G  G    +      RR  S + SLS    +R+P R+ +R  S  R     
Sbjct: 239 TRPRKIKKDGKEG-IEEIDRHVERRRSRSPRRSLS---PRRSPRRSRSR--SHHREGHGS 298

Query: 254 SINDRDTGSDLRRSPSNHRSESREQPDNRD-SRDREFDR---ESRDREFERERSRDRDYD 313
           S  DR+   +  R      ++ RE+   R  S DR  DR    SR+R   R RSRDR  D
Sbjct: 299 SSFDRELEREKERQRLEREAKEREKERRRSRSIDRGLDRRRSRSRERHRSRSRSRDRKGD 358

Query: 314 RDRGRDRDRDRDRNRGKHIDREREREKYRDRDRERERDRERSYDYDRRTHYADRDSRRDY 373
           R R RDR+R+++  RG+  DR+ ++E+  DR+R+RER RERS +   R    ++  + D 
Sbjct: 359 R-RDRDREREKENERGRRRDRDYDKERGSDRERDRERSRERSKEQRSRGDGEEKKHKEDK 418

Query: 374 E-RSCREGDNDRHYRRSRSRSRSRSRNLQTGNVQGHEREPSSVRGGATEKTSVISSN--- 433
           E R  R+   +   + SRSRSR R    ++ N     R  S  +    +  S   +N   
Sbjct: 419 EDRRHRDDKKESKKKHSRSRSRERKHRSRSRNAGKRSRSRSKDKSSRHKNESKEKANKRS 478

Query: 434 LAKLKDMYGDVSEQKGDSSKDR-FNRKDSSGEE 438
            +  +   G V ++K + S  R  +RK S  ++
Sbjct: 479 RSGSQGRTGSVEKRKREHSPSREKSRKRSRSQD 501

BLAST of Sed0006929 vs. ExPASy Swiss-Prot
Match: Q6P7Y3 (Pre-mRNA-splicing factor 38B OS=Danio rerio OX=7955 GN=prpf38b PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 5.5e-43
Identity = 173/467 (37.04%), Postives = 236/467 (50.54%), Query Frame = 0

Query: 14  LEKVLCMNILSSDYFK-ELYRLKTYHEVVDEIYNQVDHVEPW---------MTGNCRG-- 73
           L  ++  N+LSS YFK +LY LKTYHEVVDEIY +V+HVEPW          TG C G  
Sbjct: 36  LNPMILTNVLSSPYFKVQLYELKTYHEVVDEIYFKVNHVEPWEKGSRKTAGQTGMCGGVR 95

Query: 74  -------PSTAFCLLYKFFTMKLTVKQMHGLLNHEDSPYIRALSKIGFLYLRYVADPKTL 133
                   STAFCLLYK FT+KLT KQ+ GL+ H DSP IRAL   GF+Y+RY   P  L
Sbjct: 96  GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHSDSPDIRAL---GFMYIRYTQPPPDL 155

Query: 134 WNWFEPYVKDEEEFS-PGFNGRMATMGAYVRDLLLGQYYFDTLFPRIPVPVLRQVVTSLE 193
            +W++ ++ DEEE       G + T+G  +R  L    +F TLFPRIPVPV + +   ++
Sbjct: 156 VDWYDEFLDDEEELDVKAGGGCVMTVGEMLRSFLTKLEWFSTLFPRIPVPVQKAIDQHMK 215

Query: 194 K--LKLPSKHSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVR--- 253
               K P K             E+      +  A+ +   G +   R   R  SP +   
Sbjct: 216 SRPRKPPQKDE----------QEEEEEEATAAPAADTGRHGDKRRSRTPRRSPSPRKSQN 275

Query: 254 RTIQPSINDRDTGSDLRRSPSNHRSESREQPDNRD-SRDREFDRESRDREFERERSRDRD 313
           R+   S +    G+         R   R++ + +D  RDR+ DRE RDRE +R+R R R 
Sbjct: 276 RSRSRSHHRERHGASFDYELERERDRQRKEREGKDRDRDRDRDRE-RDRERDRDRRRSRT 335

Query: 314 YDRDRGRDRDRDRDRNRGKHIDRERERE-KYRDRDRERERDRERSYDYDRRTHYADRDSR 373
            DR+  R R R R+R R +   R++  E K RD+DRE E +RERS   DR  H+ DR+  
Sbjct: 336 PDRNAERRRSRSRERRRSRSTSRDKRTERKDRDKDREAESERERSRKKDRE-HHKDRERS 395

Query: 374 RDYERSCREGDNDRH------------YRRSRSRSRSRSRNLQTGNVQGHEREPSS---V 433
           +D +RS  EG+  RH             R  RSRSRSR R         H+ E SS    
Sbjct: 396 KD-KRSKGEGEERRHKDDKEEKKHREEKRSKRSRSRSRDRK--------HKAERSSKKRS 455

Query: 434 RGGATEKTSVISSNLAKLKDMYGDVSEQKGDSSKDRFNRKDSSGEEV 439
           R G+  +         K +  +    + K   SK+R +R++SS E +
Sbjct: 456 RSGSRSRQEAGEEKNRKRERSHSKDRQHKRSRSKERSHRRESSNERI 478

BLAST of Sed0006929 vs. ExPASy TrEMBL
Match: A0A6J1JTS5 (Pre-mRNA-splicing factor 38 OS=Cucurbita maxima OX=3661 GN=LOC111489677 PE=3 SV=1)

HSP 1 Score: 678.7 bits (1750), Expect = 1.6e-191
Identity = 382/462 (82.68%), Postives = 408/462 (88.31%), Query Frame = 0

Query: 1   MEIKTSEKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKT  KPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLNHEDSPYIRALSKIGFLYLRYVADPKTLWNWFEP 120
           GPSTAFCLLYKFFTMKLTVKQMHGLL HEDSPYIRA   IGFLYLRYVADPKTLWNW EP
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA---IGFLYLRYVADPKTLWNWVEP 120

Query: 121 YVKDEEEFSPGFNGRMATMGAYVRDLLLGQYYFDTLFPRIPVPVLRQVVTSLEKLKLPSK 180
           YVKDEEEFSPG +GRM TMG YVRDLLLGQYYFDTLFPRIPVPVLRQVV +LEKLKLPSK
Sbjct: 121 YVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVANLEKLKLPSK 180

Query: 181 HSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTIQPSINDRDT 240
           HSGVTGETHR+GSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT+  S  DRD 
Sbjct: 181 HSGVTGETHRLGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPTSAIDRDN 240

Query: 241 GSDLRRSPSNHRSESREQPDNRD-SRDREFDRE-SRDREFERERSRDRDYDRDRGRDRDR 300
             DLRRSPS+ RS+SRE PD R+ SRDR++DRE SRDR+++RERSRDR+YDRDRGRDRDR
Sbjct: 241 SDDLRRSPSSRRSQSREHPDTRERSRDRDYDRERSRDRDYDRERSRDREYDRDRGRDRDR 300

Query: 301 DR--DRNRGKHIDRE------REREKYRDRDRERERDRERSYDYDRRTHYADRDSRRDYE 360
           +R  DR+R K+ DRE      REREK RDR+R+RERDRERSYDYDRRTHY DR+ RRD+E
Sbjct: 301 EREHDRDREKYRDRERDRERDREREKARDRERDRERDRERSYDYDRRTHYTDREGRRDFE 360

Query: 361 RSCREGDNDRHYRRSRSRSRSR--SRNLQTG-NVQG-HEREPSSVRGGATEKTSVISSNL 420
           RS R+G   RHYRRSRSRSRSR  SR+LQTG N  G HEREPS  RG  +EKTS+ISSNL
Sbjct: 361 RSSRDG-GTRHYRRSRSRSRSRSSSRSLQTGVNAHGHHEREPSPARGRTSEKTSIISSNL 420

Query: 421 AKLKDMYGDVSEQK--GDSSKDRFNRKDSSGEEVIRLGGSWK 447
           AKLKDMYGDVSEQK  GD SK+R NR+DSSGEEVIRLGGSWK
Sbjct: 421 AKLKDMYGDVSEQKGGGDPSKERINRRDSSGEEVIRLGGSWK 458

BLAST of Sed0006929 vs. ExPASy TrEMBL
Match: A0A5D3D5T6 (Pre-mRNA-splicing factor 38 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00040 PE=3 SV=1)

HSP 1 Score: 677.2 bits (1746), Expect = 4.8e-191
Identity = 381/478 (79.71%), Postives = 408/478 (85.36%), Query Frame = 0

Query: 1   MEIKTSEKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKT  KPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLNHEDSPYIRALSKIGFLYLRYVADPKTLWNWFEP 120
           GPSTAFCLLYKFFTMKLTVKQMHGLL HEDSPYIRA   IGFLYLRYVADPKTLWNWFEP
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA---IGFLYLRYVADPKTLWNWFEP 120

Query: 121 YVKDEEEFSPGFNGRMATMGAYVRDLLLGQYYFDTLFPRIPVPVLRQVVTSLEKLKLPSK 180
           YVKD+EEFSPG +GRM TMG YVRDLLLGQYYFDTLFPRIPVPVLRQVV++LEKLKLPSK
Sbjct: 121 YVKDDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSK 180

Query: 181 HSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTIQPSINDRDT 240
           HSGVTGETHR+GSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT+  S+NDRD 
Sbjct: 181 HSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSVNDRDI 240

Query: 241 GSDLRRSPSNHRSESREQPDNRD-----------SRDREFDRE-SRDREFERERSRDRDY 300
             DLRRSPSN RS+SRE PD+R+           SRDRE+DRE SRDR+++RERSRDRDY
Sbjct: 241 NDDLRRSPSNRRSQSREHPDSRERSRDREYDRERSRDREYDRERSRDRDYDRERSRDRDY 300

Query: 301 DRDRGRDRDRDRDRNRG------------------KHIDREREREKYRDRDRERERDRER 360
           DR+R RDRD DRDR+RG                  +  DR+REREK RDR+R+RERDRER
Sbjct: 301 DRERSRDRDYDRDRDRGRDRDRDRELDRDREKYRDRERDRDREREKARDRERDRERDRER 360

Query: 361 SYDYDRRTHYADRDSRRDYERSCREGDNDRHYRRSRSRSRSRS--RNLQTGNVQGHEREP 420
           SYDYDRRTHY+DR+SRRD+ERS R+G   RHYRRSRSRSRSRS  R+LQT     HERE 
Sbjct: 361 SYDYDRRTHYSDRESRRDFERSSRDG-GTRHYRRSRSRSRSRSRGRSLQT----HHEREQ 420

Query: 421 SSVRGGATEKTSVISSNLAKLKDMYGDVSEQKGDSSKDRFNRKDSSGEEVIRLGGSWK 447
           S  RGG TEK SVISSNLAKLKD+YGDVSEQKGDSSK   NR+DSSGEEVIRLGGSWK
Sbjct: 421 SPARGGTTEKASVISSNLAKLKDIYGDVSEQKGDSSK--INRRDSSGEEVIRLGGSWK 468

BLAST of Sed0006929 vs. ExPASy TrEMBL
Match: A0A6J1CK04 (Pre-mRNA-splicing factor 38 OS=Momordica charantia OX=3673 GN=LOC111011867 PE=3 SV=1)

HSP 1 Score: 673.7 bits (1737), Expect = 5.3e-190
Identity = 376/467 (80.51%), Postives = 407/467 (87.15%), Query Frame = 0

Query: 1   MEIKTSEKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKT  KPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLNHEDSPYIRALSKIGFLYLRYVADPKTLWNWFEP 120
           GPSTAFCLLYKFFTMKLTVKQMHGLL HEDSPYIRA   IGFLYLRYVADPKTLWNWFEP
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA---IGFLYLRYVADPKTLWNWFEP 120

Query: 121 YVKDEEEFSPGFNGRMATMGAYVRDLLLGQYYFDTLFPRIPVPVLRQVVTSLEKLKLPSK 180
           YVKDEEEFSPG +GRM TMG YVRDLLLGQYYFDTLFPRIPVPVLRQVV +LEKLKLPSK
Sbjct: 121 YVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVANLEKLKLPSK 180

Query: 181 HSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTIQPSINDRDT 240
           HSGVTGETHR+GSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT+ PS ND+D 
Sbjct: 181 HSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSANDKDN 240

Query: 241 GSDLRRSPSNHRSESREQPDNRD-SRDREFDRE-SRDREFERERSRDRDYDRDRGRDRDR 300
           G D+RRSPS+ RS+SRE PDN + SRDR++DRE SRDR+ +R+RSRDRD+DRDRGRDRDR
Sbjct: 241 GDDVRRSPSSRRSQSREHPDNGERSRDRDYDRERSRDRDHDRDRSRDRDHDRDRGRDRDR 300

Query: 301 DRDRNRGKHIDREREREKYRDRD----------------RERERDRERSYDYDRRTHYAD 360
           DRDR+R K+ DRER+R++ RDRD                RER+RDRERSYDYDRR+HYAD
Sbjct: 301 DRDRDREKYRDRERDRDRDRDRDRDRDRERERERERVRERERDRDRERSYDYDRRSHYAD 360

Query: 361 RDSRRDYERSCREGDNDRHYR--RSRSRSRSRSRNLQTGNVQGHEREPSSVRGGATEKTS 420
           RDSRRDYE+S R+ D  RHYR  RSRSRSRSRSR+LQT N   HER PS VR G T+KTS
Sbjct: 361 RDSRRDYEKSSRD-DGSRHYRRSRSRSRSRSRSRSLQTVNAH-HERVPSPVRDGNTDKTS 420

Query: 421 VISSNLAKLKDMYGDVSEQKGDSSKDRFNRKDSSGEEVIRL-GGSWK 447
            ISSNLAKLKD+YGDVS+QKGD SK+R  ++D SGEEV RL GGSWK
Sbjct: 421 NISSNLAKLKDIYGDVSDQKGDCSKERVPKRDGSGEEVFRLGGGSWK 462

BLAST of Sed0006929 vs. ExPASy TrEMBL
Match: A0A5A7TWJ6 (Pre-mRNA-splicing factor 38 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00850 PE=3 SV=1)

HSP 1 Score: 673.3 bits (1736), Expect = 6.9e-190
Identity = 381/488 (78.07%), Postives = 408/488 (83.61%), Query Frame = 0

Query: 1   MEIKTSEKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKT  KPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLNHEDSPYIRALSKIGFLYLRYVADPKTLWNWFEP 120
           GPSTAFCLLYKFFTMKLTVKQMHGLL HEDSPYIRA   IGFLYLRYVADPKTLWNWFEP
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA---IGFLYLRYVADPKTLWNWFEP 120

Query: 121 YVKDEEEFSPGFNGRMATMGAYVRDLLLGQYYFDTLFPRIPVPVLRQVVTSLEKLKLPSK 180
           YVKD+EEFSPG +GRM TMG YVRDLLLGQYYFDTLFPRIPVPVLRQVV++LEKLKLPSK
Sbjct: 121 YVKDDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSK 180

Query: 181 HSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTIQPSINDRDT 240
           HSGVTGETHR+GSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT+  S+NDRD 
Sbjct: 181 HSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSVNDRDI 240

Query: 241 GSDLRRSPSNHRSESREQPDNRD-----------SRDREFDRE-----------SRDREF 300
             DLRRSPSN RS+SRE PD+R+           SRDRE+DRE           SRDR++
Sbjct: 241 NDDLRRSPSNRRSQSREHPDSRERSRDREYDRERSRDREYDRERSRDRDYDRERSRDRDY 300

Query: 301 ERERSRDRDYDRDRGRDRDRDRDRNRG------------------KHIDREREREKYRDR 360
           +RERSRDRDYDR+R RDRD DRDR+RG                  +  DR+REREK RDR
Sbjct: 301 DRERSRDRDYDRERSRDRDYDRDRDRGRDRDRDRELDRDREKYRDRERDRDREREKARDR 360

Query: 361 DRERERDRERSYDYDRRTHYADRDSRRDYERSCREGDNDRHYRRSRSRSRSRS--RNLQT 420
           +R+RERDRERSYDYDRRTHY+DR+SRRD+ERS R+G   RHYRRSRSRSRSRS  R+LQT
Sbjct: 361 ERDRERDRERSYDYDRRTHYSDRESRRDFERSSRDG-GTRHYRRSRSRSRSRSRGRSLQT 420

Query: 421 GNVQGHEREPSSVRGGATEKTSVISSNLAKLKDMYGDVSEQKGDSSKDRFNRKDSSGEEV 447
                HERE S  RGG TEK SVISSNLAKLKD+YGDVSEQKGDSSK   NR+DSSGEEV
Sbjct: 421 ----HHEREQSPARGGTTEKASVISSNLAKLKDIYGDVSEQKGDSSK--INRRDSSGEEV 478

BLAST of Sed0006929 vs. ExPASy TrEMBL
Match: A0A6J1FF63 (Pre-mRNA-splicing factor 38 OS=Cucurbita moschata OX=3662 GN=LOC111444923 PE=3 SV=1)

HSP 1 Score: 671.8 bits (1732), Expect = 2.0e-189
Identity = 379/465 (81.51%), Postives = 407/465 (87.53%), Query Frame = 0

Query: 1   MEIKTSEKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKT  KPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLNHEDSPYIRALSKIGFLYLRYVADPKTLWNWFEP 120
           GPSTAFCLLYKFFTMKLTVKQMHGLL HEDSPYIRA   IGFLYLRYVADPKTLWNW EP
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA---IGFLYLRYVADPKTLWNWVEP 120

Query: 121 YVKDEEEFSPGFNGRMATMGAYVRDLLLGQYYFDTLFPRIPVPVLRQVVTSLEKLKLPSK 180
           YVKDEEEFSPG +GRM TMG YVRDLLLGQYYFDTLFPRIPVPVLRQVV +LEKLKLPSK
Sbjct: 121 YVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVANLEKLKLPSK 180

Query: 181 HSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTIQPSINDRDT 240
           HSGVTGETHR+GSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRT+  S  DRD 
Sbjct: 181 HSGVTGETHRLGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPTSAIDRDN 240

Query: 241 GSDLRRSPSNHRSESREQPDNRD-SRDREFDRE-SRDREFERERSRDRDYDRDRGRDRDR 300
             DLRRSPS+ RS+SRE PD R+ SRDR++DRE SRDR+++RERSRDR+YDRDR RDR R
Sbjct: 241 NDDLRRSPSSRRSQSREHPDTRERSRDRDYDRERSRDRDYDRERSRDREYDRDRDRDRGR 300

Query: 301 DR------DRNRGKHIDREREREKYRDRD--RERERDRERSYDYDRRTHYADRDSRRDYE 360
           DR      DR+R K+ DRER+RE+ R+R+  R+RERDRERSYDYDRRTHY DRD RRD+E
Sbjct: 301 DRDREQEHDRDREKYRDRERDRERDREREKARDRERDRERSYDYDRRTHYTDRDGRRDFE 360

Query: 361 RSCREGDNDRHYR--RSRSRSRSRSRNLQTG-NVQG-HEREPSSVRGGATEKTSVISSNL 420
           RS R+G   RHYR  RSRSRSRSRSR+LQTG N  G HEREPS  RG  +EKTS+ISSNL
Sbjct: 361 RSSRDG-GTRHYRRSRSRSRSRSRSRSLQTGVNAHGHHEREPSPARGRTSEKTSIISSNL 420

Query: 421 AKLKDMYGDVSEQK-----GDSSKDRFNRKDSSGEEVIRLGGSWK 447
           AKLKDMYGDVSEQK     GDSSK+R NR+DSSGEEVIRLGGSW+
Sbjct: 421 AKLKDMYGDVSEQKGGGGGGDSSKERINRRDSSGEEVIRLGGSWR 461

BLAST of Sed0006929 vs. TAIR 10
Match: AT5G37370.1 (PRP38 family protein )

HSP 1 Score: 450.3 bits (1157), Expect = 1.8e-126
Identity = 278/451 (61.64%), Postives = 321/451 (71.18%), Query Frame = 0

Query: 2   EIKTSEKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCRG 61
           EI+++ +  +SLLEKVL MNILSSDYFKELY LKTYHEV+DEIYNQV+HVEPWM GNCRG
Sbjct: 3   EIQSNGRAYESLLEKVLSMNILSSDYFKELYGLKTYHEVIDEIYNQVNHVEPWMGGNCRG 62

Query: 62  PSTAFCLLYKFFTMKLTVKQMHGLLNHEDSPYIRALSKIGFLYLRYVADPKTLWNWFEPY 121
           PSTA+CLLYKFFTMKLTVKQMHGLL H DSPYIRA   +GFLYLRYVAD KTLW W+EPY
Sbjct: 63  PSTAYCLLYKFFTMKLTVKQMHGLLKHTDSPYIRA---VGFLYLRYVADAKTLWTWYEPY 122

Query: 122 VKDEEEFSPGFNGRMATMGAYVRDLLLGQYYFDTLFPRIPVPVLRQVVTSLEKLKLPSKH 181
           +KD+EEFSPG NGRM TMG YVRDLLLG YYFDTLFPRIPVPV+RQ+V++LEK+ LP+K 
Sbjct: 123 IKDDEEFSPGSNGRMTTMGVYVRDLLLGLYYFDTLFPRIPVPVMRQIVSNLEKMNLPTKP 182

Query: 182 SGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTIQPSINDRDTG 241
           SG TG+  R GSEDTARRPPSVKASLSVSFGQRAPHRASTR SSPVRR   P+  DR+ G
Sbjct: 183 SGSTGDMTR-GSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPVRRP-PPTGYDRNGG 242

Query: 242 SDL-RRSPSNHRSESREQPDNRDSRDREFDRESRDREFERERSRDRDYDRDRGRDRDRDR 301
            ++ +RSP                                 RS+ RDY  DR  DR R+R
Sbjct: 243 DEVQQRSP--------------------------------RRSQSRDYYSDRDSDRQRER 302

Query: 302 DRNRGKHIDREREREKYRDRDRERERDRERSYDYDRRTH--YADRDSRRDYERSCREGDN 361
           +R      +++RERE+ RDR RERERD    Y  DRR+   Y  R  R DY     E D 
Sbjct: 303 ER------EKDRERERGRDRYRERERD----YGNDRRSRRDYDSRSRRNDY-----EDDR 362

Query: 362 DRHYRRSRSRSRSRSRNLQTGNVQGHEREPSSVRGGATEKTS--VISSNLAKLKDMYGDV 421
            RH RRSRSRSRSRSR++Q       EREP+  R  + ++ S   ++SNLAKLKD+YGD 
Sbjct: 363 SRHDRRSRSRSRSRSRSVQI------EREPTPKRDSSNKEKSAVTVNSNLAKLKDLYGDA 393

Query: 422 SEQKGDSSKDRFNRKDSSGEEVIRLGG-SWK 447
           S QK D       RKDSS EEVI+LGG SW+
Sbjct: 423 SSQKRDEGFG--TRKDSSSEEVIKLGGSSWR 393

BLAST of Sed0006929 vs. TAIR 10
Match: AT5G37370.2 (PRP38 family protein )

HSP 1 Score: 430.6 bits (1106), Expect = 1.5e-120
Identity = 271/451 (60.09%), Postives = 314/451 (69.62%), Query Frame = 0

Query: 2   EIKTSEKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCRG 61
           EI+++ +  +SLLEKVL MNILSSDYFKELY LKTYHEV+DEIYNQV+HVEPWM GNCRG
Sbjct: 3   EIQSNGRAYESLLEKVLSMNILSSDYFKELYGLKTYHEVIDEIYNQVNHVEPWMGGNCRG 62

Query: 62  PSTAFCLLYKFFTMKLTVKQMHGLLNHEDSPYIRALSKIGFLYLRYVADPKTLWNWFEPY 121
           PSTA+CLLYKFFTMKLTVKQMHGLL H DSPYIRA   +GFLYLRYVAD KTLW W+EPY
Sbjct: 63  PSTAYCLLYKFFTMKLTVKQMHGLLKHTDSPYIRA---VGFLYLRYVADAKTLWTWYEPY 122

Query: 122 VKDEEEFSPGFNGRMATMGAYVRDLLLGQYYFDTLFPRIPVPVLRQVVTSLEKLKLPSKH 181
           +KD+EEFSPG NGRM TMG Y        YYFDTLFPRIPVPV+RQ+V++LEK+ LP+K 
Sbjct: 123 IKDDEEFSPGSNGRMTTMGVY--------YYFDTLFPRIPVPVMRQIVSNLEKMNLPTKP 182

Query: 182 SGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTIQPSINDRDTG 241
           SG TG+  R GSEDTARRPPSVKASLSVSFGQRAPHRASTR SSPVRR   P+  DR+ G
Sbjct: 183 SGSTGDMTR-GSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPVRRP-PPTGYDRNGG 242

Query: 242 SDL-RRSPSNHRSESREQPDNRDSRDREFDRESRDREFERERSRDRDYDRDRGRDRDRDR 301
            ++ +RSP                                 RS+ RDY  DR  DR R+R
Sbjct: 243 DEVQQRSP--------------------------------RRSQSRDYYSDRDSDRQRER 302

Query: 302 DRNRGKHIDREREREKYRDRDRERERDRERSYDYDRRTH--YADRDSRRDYERSCREGDN 361
           +R      +++RERE+ RDR RERERD    Y  DRR+   Y  R  R DY     E D 
Sbjct: 303 ER------EKDRERERGRDRYRERERD----YGNDRRSRRDYDSRSRRNDY-----EDDR 362

Query: 362 DRHYRRSRSRSRSRSRNLQTGNVQGHEREPSSVRGGATEKTS--VISSNLAKLKDMYGDV 421
            RH RRSRSRSRSRSR++Q       EREP+  R  + ++ S   ++SNLAKLKD+YGD 
Sbjct: 363 SRHDRRSRSRSRSRSRSVQI------EREPTPKRDSSNKEKSAVTVNSNLAKLKDLYGDA 385

Query: 422 SEQKGDSSKDRFNRKDSSGEEVIRLGG-SWK 447
           S QK D       RKDSS EEVI+LGG SW+
Sbjct: 423 SSQKRDEGFG--TRKDSSSEEVIKLGGSSWR 385

BLAST of Sed0006929 vs. TAIR 10
Match: AT5G37370.4 (PRP38 family protein )

HSP 1 Score: 366.3 bits (939), Expect = 3.5e-101
Identity = 237/398 (59.55%), Postives = 273/398 (68.59%), Query Frame = 0

Query: 55  MTGNCRGPSTAFCLLYKFFTMKLTVKQMHGLLNHEDSPYIRALSKIGFLYLRYVADPKTL 114
           M GNCRGPSTA+CLLYKFFTMKLTVKQMHGLL H DSPYIRA   +GFLYLRYVAD KTL
Sbjct: 1   MGGNCRGPSTAYCLLYKFFTMKLTVKQMHGLLKHTDSPYIRA---VGFLYLRYVADAKTL 60

Query: 115 WNWFEPYVKDEEEFSPGFNGRMATMGAYVRDLLLGQYYFDTLFPRIPVPVLRQVVTSLEK 174
           W W+EPY+KD+EEFSPG NGRM TMG YVRDLLLG YYFDTLFPRIPVPV+RQ+V++LEK
Sbjct: 61  WTWYEPYIKDDEEFSPGSNGRMTTMGVYVRDLLLGLYYFDTLFPRIPVPVMRQIVSNLEK 120

Query: 175 LKLPSKHSGVTGETHRMGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTIQPS 234
           + LP+K SG TG+  R GSEDTARRPPSVKASLSVSFGQRAPHRASTR SSPVRR   P+
Sbjct: 121 MNLPTKPSGSTGDMTR-GSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPVRRP-PPT 180

Query: 235 INDRDTGSDL-RRSPSNHRSESREQPDNRDSRDREFDRESRDREFERERSRDRDYDRDRG 294
             DR+ G ++ +RSP                                 RS+ RDY  DR 
Sbjct: 181 GYDRNGGDEVQQRSP--------------------------------RRSQSRDYYSDRD 240

Query: 295 RDRDRDRDRNRGKHIDREREREKYRDRDRERERDRERSYDYDRRTH--YADRDSRRDYER 354
            DR R+R+R      +++RERE+ RDR RERERD    Y  DRR+   Y  R  R DY  
Sbjct: 241 SDRQRERER------EKDRERERGRDRYRERERD----YGNDRRSRRDYDSRSRRNDY-- 300

Query: 355 SCREGDNDRHYRRSRSRSRSRSRNLQTGNVQGHEREPSSVRGGATEKTS--VISSNLAKL 414
              E D  RH RRSRSRSRSRSR++Q       EREP+  R  + ++ S   ++SNLAKL
Sbjct: 301 ---EDDRSRHDRRSRSRSRSRSRSVQI------EREPTPKRDSSNKEKSAVTVNSNLAKL 338

Query: 415 KDMYGDVSEQKGDSSKDRFNRKDSSGEEVIRLGG-SWK 447
           KD+YGD S QK D       RKDSS EEVI+LGG SW+
Sbjct: 361 KDLYGDASSQKRDEGFG--TRKDSSSEEVIKLGGSSWR 338

BLAST of Sed0006929 vs. TAIR 10
Match: AT5G37370.3 (PRP38 family protein )

HSP 1 Score: 171.4 bits (433), Expect = 1.6e-42
Identity = 79/96 (82.29%), Postives = 88/96 (91.67%), Query Frame = 0

Query: 2  EIKTSEKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCRG 61
          EI+++ +  +SLLEKVL MNILSSDYFKELY LKTYHEV+DEIYNQV+HVEPWM GNCRG
Sbjct: 3  EIQSNGRAYESLLEKVLSMNILSSDYFKELYGLKTYHEVIDEIYNQVNHVEPWMGGNCRG 62

Query: 62 PSTAFCLLYKFFTMKLTVKQMHGLLNHEDSPYIRAL 98
          PSTA+CLLYKFFTMKLTVKQMHGLL H DSPYIRA+
Sbjct: 63 PSTAYCLLYKFFTMKLTVKQMHGLLKHTDSPYIRAI 98

BLAST of Sed0006929 vs. TAIR 10
Match: AT5G53440.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 49.7 bits (117), Expect = 7.2e-06
Identity = 85/234 (36.32%), Postives = 119/234 (50.85%), Query Frame = 0

Query: 221 TRDSSPVRRTIQPSINDRDTGSDLRRSPSNHRSESREQPDNRDSRDREFDRESRDREFER 280
           TRD S  +   Q    D D G +    P +      E+  NRD  DRE DR  RDR  ER
Sbjct: 274 TRDESKKKSKFQ----DNDHGHE----PDSELDGYHERERNRD-YDRESDRNERDR--ER 333

Query: 281 ERSRDRDYDRDRGRDRDRDRDRNRGKHIDREREREKYRDRDRERERDRERSYDYDR-RTH 340
            R RDRDY+RDR RDRDRDR+R+R +   R+ E ++Y DRD +R+R R+R  D++R RTH
Sbjct: 334 TRDRDRDYERDRDRDRDRDRERDRDR---RDYEHDRYHDRDWDRDRSRDRDRDHERDRTH 393

Query: 341 YADRDSRRDY------ERSCREGDNDRHYRR---SRSRSRSRSRNLQTGNVQGHEREPSS 400
             ++D  RDY       +S RE DNDR   R      R + R    ++ + Q ++   + 
Sbjct: 394 DREKDRSRDYYHDGKRSKSDRERDNDRDVSRLDDQSGRYKDRRDGRRSPDYQDYQDVITG 453

Query: 401 VRGGATEKTSVISSNLAKLKDMYGDVSEQKGDSSKDRFNRKDSSGEEVIRLGGS 445
            R    E    ++    +L      V E+ G++S D+  +  SS E     GGS
Sbjct: 454 SRSSRVEPDGDMTRPERQLSSSV--VQEENGNAS-DQITKGASSREVAELSGGS 490

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038875168.11.1e-19483.19pre-mRNA splicing factor SR-like 1 isoform X1 [Benincasa hispida] >XP_038875169.... [more]
XP_022993767.13.4e-19182.68pre-mRNA splicing factor SR-like 1 [Cucurbita maxima][more]
TYK18924.19.9e-19179.71pre-mRNA-splicing factor 38B [Cucumis melo var. makuwa][more]
XP_022141497.11.1e-18980.51pre-mRNA splicing factor SR-like 1 isoform X1 [Momordica charantia] >XP_02214149... [more]
KAA0046277.11.4e-18978.07pre-mRNA-splicing factor 38B [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Q8RWB12.6e-12561.64Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis thaliana OX=3702 GN=SRL1 PE=1 ... [more]
Q6AXY72.4e-4636.63Pre-mRNA-splicing factor 38B OS=Rattus norvegicus OX=10116 GN=Prpf38b PE=1 SV=1[more]
Q5VTL85.3e-4637.91Pre-mRNA-splicing factor 38B OS=Homo sapiens OX=9606 GN=PRPF38B PE=1 SV=1[more]
Q80SY57.6e-4538.19Pre-mRNA-splicing factor 38B OS=Mus musculus OX=10090 GN=Prpf38b PE=1 SV=1[more]
Q6P7Y35.5e-4337.04Pre-mRNA-splicing factor 38B OS=Danio rerio OX=7955 GN=prpf38b PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1JTS51.6e-19182.68Pre-mRNA-splicing factor 38 OS=Cucurbita maxima OX=3661 GN=LOC111489677 PE=3 SV=... [more]
A0A5D3D5T64.8e-19179.71Pre-mRNA-splicing factor 38 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A6J1CK045.3e-19080.51Pre-mRNA-splicing factor 38 OS=Momordica charantia OX=3673 GN=LOC111011867 PE=3 ... [more]
A0A5A7TWJ66.9e-19078.07Pre-mRNA-splicing factor 38 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
A0A6J1FF632.0e-18981.51Pre-mRNA-splicing factor 38 OS=Cucurbita moschata OX=3662 GN=LOC111444923 PE=3 S... [more]
Match NameE-valueIdentityDescription
AT5G37370.11.8e-12661.64PRP38 family protein [more]
AT5G37370.21.5e-12060.09PRP38 family protein [more]
AT5G37370.43.5e-10159.55PRP38 family protein [more]
AT5G37370.31.6e-4282.29PRP38 family protein [more]
AT5G53440.17.2e-0636.32unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005037Pre-mRNA-splicing factor 38PFAMPF03371PRP38coord: 12..164
e-value: 9.0E-49
score: 165.7
IPR005037Pre-mRNA-splicing factor 38PANTHERPTHR23142UNCHARACTERIZEDcoord: 296..444
IPR005037Pre-mRNA-splicing factor 38PANTHERPTHR23142UNCHARACTERIZEDcoord: 1..331
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..446
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 239..364
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 413..437
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 206..238
NoneNo IPR availablePANTHERPTHR23142:SF3PRP38 FAMILY PROTEINcoord: 1..331
NoneNo IPR availablePANTHERPTHR23142:SF3PRP38 FAMILY PROTEINcoord: 296..444

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0006929.1Sed0006929.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000398 mRNA splicing, via spliceosome
cellular_component GO:0071011 precatalytic spliceosome