Sed0006730 (gene) Chayote v1

Overview


Name	Sed0006730
Type	gene
Organism	Sechium edule (Chayote v1)
Description	cytochrome c oxidase subunit 6a, mitochondrial-like
Location	LG13: 9135923 .. 9139945 (+)
RNA-Seq Expression	Sed0006730
Synteny	Sed0006730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTTACTGTCCCTCGCACGTGCCGAGTTCGCACGTTTGGTAATTGAGTCGTGTATGTAAATCGCAAGGGTTTGGTGATTTCAATCACTCGACAATTTGAGAGAAAGAGAAAATGGCAATGGCGACGATCCGATCCAACCTTGTTCGCGCCGCCGTCCGCGGTGCCTCTCGAAATCCCGTTCAGCCCAAACGCGGCTTTTCTTCCGCTGCTCACGACGATGTTCGTAAGTTCCTCTATCTCTCTCTCTCTTGGTAGTTCTCATCGTGATCGTGTATCCGCTGCAATTGATTCACATCAGTTTTGATTTTCTTTTCTTCATTGACACTTTGACAGGATTTTATGTTTGATTTCATTCCTTTTCCGGCCCTTTTTCTGTCTGATAAAACGGGGCCTGTTAATGGCTGAATCATGTTAAGAAATTTCGACCGAAATAATTTGATTAGACGCTTTTCTGCTTCTTTTATTGATTGGAAGTCTTGCAAATCTAGGTGTCAATATTTGAATTCAGATTTAAGTGATGTTAGTAGTTTTGTTAAATCATCGGGTGGAAGTATAAACATGTACATTTGACAATTGACTGTGGATGGGGTTTTCAGTCGCTAACGGGCTGATTTGATTTCAAGGTAGTGGGAAAAAGAAGACATTGGGGACATTGGGACACATGTTCTTCTGTTTTTGGGGTGGGTTTTTGTTAAGTGTTGGAGATAAGCCATGGTGAAGGTTGCTTGACAGATGAGTGTGTTCAGTGTTGTAATTCACCTTACATATGCTTGATGACTCTTTAATTTGGTTGGTAGATATATGTATGGTCATTTTAAACAACATTTCAGACTAATACGAAGGGAGTAGCAAGGAAGAATTGTATGCAGGAGGATAATGACGTTTTATTTGTTTATTGTTTTTTAGTTATGATATCTGTTCAGCCATTCTTGTACTGCCTAGGCATTTATATCTCTTGTACGAACTCTCTTTCTTGATGTCAGGTGAAACGGCTAAGTGGGAGAAGATCACTTATGCAGGCATTGCATCCTGCACTATTTTAGCAGCCTTCATTCTATCAAAGGGCCACCCCCACCATGAAGAGCCTCCTGTGAGCTATAAATTCAGTCAATTTATATTTTCCCTCTACTACTAAGAAATATCTTAGTTGCAATTTGCATTTTACTCTCATTTATGGCCTATTTATTTTTGTTTGGGTTTTCATTATACGCAGGCTTACCCGTATATGCACATACGCAATAAGGAGTTCCCATGGGGTAAGCATCCACATCAATACGAGTTCTATAGCATCTTTTATGCTTTATTTTTATTAATATTGTTGCTACATCATATTCTTCTTGAATTTATGTTTATATTTTTTAGAAATATGCATACTCCATAGTACATATTCCATATGCATTTCATCTTTTTATTTCTAGGTTTATCTTTTTTTATTGTTGCCTCCATGCTTTGCTTTCCTAACTTGAACTTTGGAACTTGGATGGTATTTTTATGTATTTTGATTGGTTACTTGTTTATAGTAATCAAGAATTTAAGATACCATTATAGGTTGGCCTAGTGGTCAAGAGGTATTTGGGGAATCAAAATGTTATGAGTTCAATCCATGATGACCACAAAATTAATTTTCTAGGATTTCCTTGATAGCCAAATGTTATAGGGTTAGAGAGTCTATCTCGTGAGAATATTTGAGTTTGGATAAGTTTTGTTCAATTGGACACTCATGGATATCCAAAAAGAAGAAAATAAAGTATTTCCAAGGGGTGGTCTCATTGGTAGAGGTTTGGGGATCCAAGGTATCCTCCTGAGGTTTCAGGTTTGAAACCCATGAGTGAGCTTGATTGTAAGTTTCAACGGGCCAGGTCTTGGGATGGGTGTAGGTGCCCTAGGTATGTAGTGAGACGAAGCTCTGATTTCCGTTTATATAATAGTAATAAGGAATTAAAATGACTACCAGTTGTTATTTCTGTTTTTTGTTTCTTGAACTTGAACATAATTTTGAATGTCAGACTCAGGTTGTTGATGATGTAGTAACCTGGAGTTGAACCAGCATATTTTGTTTGCCAACAAAACTTACAGCTATTATGTACCTAATAAATCGACTACTGATTCAGGAGCTAGTAACTTGTACACTTTTTTAATGAAGTAACTTATATGCTCATTTTTTAATTGATTATCGAAAAGGAGTATACTTGGAGATTACGTATATGAACTATCTCCTAATGGAGATGTTAAACGATTAACTATAAATACCACAAGGGTAGACATTTTTCACCATAGAGAATCTTTTGATCTAACTTATATGCTCTTATCTACCTCATTCAACTGCTAACAGTTTTTAGACCTATTTTATAATCTTTTGCTGCCTGTATTAACCTAATAATACACCTATCGCTTAATTTTGAACTGCTCCATTTTTTAATGTCAAATATTAGTTCAACGGCTTCCTCAGTCTGTTGATCATCTCAAGGTTTTATAGGTACTTCTATGATATAATTGGTTGGAAGACGTTCTCAGGAACAGTTGTACTTTTTAGATTAGATTTTTTTCTTTGATTAGAATTTGAAAGGAGAGAGTGTATTAGTCAGCAAATGATACAACAAAAAAACAATATAATGGCAGGTTAGATTAAACCCCCTCCCAAGAACTAAAAAAGAGTTTTCCAGTTACTATTGATCAAAGTCAAAAAATTTCTTGGATCTCGAACATCACCAAGAAGCTAAAAGCTGTACATTGTTACACAAATTCTCAAACAAAGTAGATTAATTCTCAAGGTCTCTTTTTCCTCTCTCACCAAAGACTCCTCAAAGAAGCCTCACAACCAAGGACCATATGCCCATTTCTTCTAATTTTAATCAACCTTACTCCAGTAATTCTAGCAGCCAACCTTCAACTCTTTGAGGAAGATAAAGGGAACAATGAAAAACATCTTGCTCCTAAGCCACCAATTTTCAGCAATCTCATCTCTGCTGAACAGAAAATTATCATGCCGTCAGTATAGTATATTGGAGCTGAGTCACACACATGCCCCTTAACTGGCATCTATGCTCATTAGGATTCTTCTTTCGACACAAAAGTGAATCGCCTACTAAAACGATGCCCCAATAGAGTGAACAGAAAAGGGAAGGGACAGAAGGCTCCCTGTCTCAATCCTTTTAGCCCCGATTTTCTCTCTTGATCTTCCAACATTTTAGAATAAAAGTTGTATGCTTCTTTTAATGTTTTGGATTGCGATAGGTTTGGGCCTTAGGAGTAAATGAATATAGTAGGGGCATGAGTGCAATTAGTTACATATTATGGTTAATGGTTATAAATAGGGAGGGATGGTTAGTGAGGTGCTATCTTGGAATTGTATGAGAGTTAGGGCGTGAGAGATATCAATTGTTGGGAGGGTGCAAGTACCTCGAATCACTTGGTTTATCGTGTATTCTTGTTATGGTTTGTTATCAATTGATCTGGGTTCTATAAAACTGTTGCTTAACTCATATGTAGAACAACTGCTGTTTAAACTGGTCTTTAAAATATTTACAAACAAAGAGCCTGAAGGATATTGACATTTATAAAAATGAGCTGAATTGGATGATCTGGATATTTTGCTCTCTGTTTGTTGCGCAATGGCTTCTTTCCTTTTATTATTTATTGTAAAATAATATTGTTTTATTCTCAATCCCTTGTGCATCAGGTCCCGATGGTCTCTTTGAGGTGAAGGATCACCACTGAGGCTCCTTTTAGGTTCATCAAAGGGAACATGGAGGGTAATTCAGTACTTTTCATTTCATTTCATATCAGAAAGACTTCATCGACTGGGTTGGATTTTTCATTTCATTCCAAAAGATGTGTGACCATTTTGCTTTCGTTAAATGCTATCAGGGTCTTATGTGACTCGTGGTTTAATTTTTTGTGTTGTCAAAACTATCCTTCCTGATTAATAAGATTAACTTTACACTCTTCCAACTCCCAATTTGCAGTATTCTTCTACGTTTTGATATTCGTACCACTAATGATATCTTGTTTATTATTCTCAAA

mRNA sequence

CGTTACTGTCCCTCGCACGTGCCGAGTTCGCACGTTTGGTAATTGAGTCGTGTATGTAAATCGCAAGGGTTTGGTGATTTCAATCACTCGACAATTTGAGAGAAAGAGAAAATGGCAATGGCGACGATCCGATCCAACCTTGTTCGCGCCGCCGTCCGCGGTGCCTCTCGAAATCCCGTTCAGCCCAAACGCGGCTTTTCTTCCGCTGCTCACGACGATGTTCGTGAAACGGCTAAGTGGGAGAAGATCACTTATGCAGGCATTGCATCCTGCACTATTTTAGCAGCCTTCATTCTATCAAAGGGCCACCCCCACCATGAAGAGCCTCCTGCTTACCCGTATATGCACATACGCAATAAGGAGTTCCCATGGGGTCCCGATGGTCTCTTTGAGGTGAAGGATCACCACTGAGGCTCCTTTTAGGTTCATCAAAGGGAACATGGAGGGTAATTCAGTACTTTTCATTTCATTTCATATCAGAAAGACTTCATCGACTGGGTTGGATTTTTCATTTCATTCCAAAAGATGTGTGACCATTTTGCTTTCGTTAAATGCTATCAGGGTCTTATGTGACTCGTGGTTTAATTTTTTGTGTTGTCAAAACTATCCTTCCTGATTAATAAGATTAACTTTACACTCTTCCAACTCCCAATTTGCAGTATTCTTCTACGTTTTGATATTCGTACCACTAATGATATCTTGTTTATTATTCTCAAA

Coding sequence (CDS)

ATGGCAATGGCGACGATCCGATCCAACCTTGTTCGCGCCGCCGTCCGCGGTGCCTCTCGAAATCCCGTTCAGCCCAAACGCGGCTTTTCTTCCGCTGCTCACGACGATGTTCGTGAAACGGCTAAGTGGGAGAAGATCACTTATGCAGGCATTGCATCCTGCACTATTTTAGCAGCCTTCATTCTATCAAAGGGCCACCCCCACCATGAAGAGCCTCCTGCTTACCCGTATATGCACATACGCAATAAGGAGTTCCCATGGGGTCCCGATGGTCTCTTTGAGGTGAAGGATCACCACTGA

Protein sequence

MAMATIRSNLVRAAVRGASRNPVQPKRGFSSAAHDDVRETAKWEKITYAGIASCTILAAFILSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKDHH

Homology

[Close]

BLAST of Sed0006730 vs. NCBI nr
Match: XP_038905594.1 (cytochrome c oxidase subunit 6a, mitochondrial [Benincasa hispida])

HSP 1 Score: 184.5 bits (467), Expect = 4.4e-43
Identity = 85/98 (86.73%), Postives = 92/98 (93.88%), Query Frame = 0


Query: 1  MAMATIRSNLVRAAVRGASRNPVQPKRGFSSAAHDDVRETAKWEKITYAGIASCTILAAF 60
          MAMA+IRSNL+RAAVRGASRN  QPKRGF+S+AHDD RETAKWEKITYAGIA+CTILA +
Sbjct: 1  MAMASIRSNLLRAAVRGASRNSAQPKRGFASSAHDDARETAKWEKITYAGIATCTILAFY 60

Query: 61 ILSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKDH 99
           LSKGHPHHEEPPAYPY+HIRNKEFPWGPDGLFEVK H
Sbjct: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]

BLAST of Sed0006730 vs. NCBI nr
Match: XP_011650608.1 (cytochrome c oxidase subunit 6a, mitochondrial isoform X2 [Cucumis sativus] >KAE8650204.1 hypothetical protein Csa_009645 [Cucumis sativus])

HSP 1 Score: 183.0 bits (463), Expect = 1.3e-42
Identity = 84/98 (85.71%), Postives = 92/98 (93.88%), Query Frame = 0


Query: 1  MAMATIRSNLVRAAVRGASRNPVQPKRGFSSAAHDDVRETAKWEKITYAGIASCTILAAF 60
          MAMA+IRSNL+RAA+RGASRN VQPKRGF+S+AHDD RETAKWEKITYAGI +C+ILA +
Sbjct: 1  MAMASIRSNLLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY 60

Query: 61 ILSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKDH 99
           LSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVK H
Sbjct: 61 NLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH 98

[Close]

BLAST of Sed0006730 vs. NCBI nr
Match: XP_023001309.1 (cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 181.0 bits (458), Expect = 4.9e-42
Identity = 83/98 (84.69%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 1  MAMATIRSNLVRAAVRGASRNPVQPKRGFSSAAHDDVRETAKWEKITYAGIASCTILAAF 60
          MAMATIRSNL+RAA+RGASRN  QPKRGF+S+AHDD  ETAKWEKITYAGIA+CT LA +
Sbjct: 1  MAMATIRSNLLRAAIRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60

Query: 61 ILSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKDH 99
           LSKGHPHHEEPPAYPY+HIRNKEFPWGPDGLFEVK H
Sbjct: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]

BLAST of Sed0006730 vs. NCBI nr
Match: XP_023551866.1 (cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 180.6 bits (457), Expect = 6.4e-42
Identity = 83/98 (84.69%), Postives = 91/98 (92.86%), Query Frame = 0


Query: 1  MAMATIRSNLVRAAVRGASRNPVQPKRGFSSAAHDDVRETAKWEKITYAGIASCTILAAF 60
          MAMATIRSNL+RAA+RGASRN  QPKRGF+S+AHDD RETAKWEKITYAGI SC+ILA +
Sbjct: 1  MAMATIRSNLLRAALRGASRNSAQPKRGFASSAHDDARETAKWEKITYAGIVSCSILAFY 60

Query: 61 ILSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKDH 99
           LSKGHPH+EEPPAYPY+HIRNKEFPWGPDGLFEVK H
Sbjct: 61 NLSKGHPHYEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]

BLAST of Sed0006730 vs. NCBI nr
Match: XP_022984430.1 (cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 180.6 bits (457), Expect = 6.4e-42
Identity = 83/98 (84.69%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 1  MAMATIRSNLVRAAVRGASRNPVQPKRGFSSAAHDDVRETAKWEKITYAGIASCTILAAF 60
          MAMA IRSNL+RAA RGASRNP QPKRGF+S+AHDD RETAKWEKITYAGI SC+ILA +
Sbjct: 1  MAMAMIRSNLLRAAFRGASRNPAQPKRGFASSAHDDARETAKWEKITYAGIVSCSILAFY 60

Query: 61 ILSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKDH 99
           LSKGHPH+EEPPAYPY+HIRNKEFPWGPDGLFEVK H
Sbjct: 61 NLSKGHPHYEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]

BLAST of Sed0006730 vs. ExPASy Swiss-Prot
Match: Q9T070 (Cytochrome c oxidase subunit 6a, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=COX6A PE=3 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.1e-33
Identity = 69/97 (71.13%), Postives = 76/97 (78.35%), Query Frame = 0


Query: 1  MAMATIRSNLVRAAVRGASRNPVQPKRGFSSAA-HDDVRETAKWEKITYAGIASCTILAA 60
          MA A +RS L RA  R A +  V PKR FSS+A HDD  E AKWEKITY GIASCT LA 
Sbjct: 1  MATAIVRSALSRAVTRAAPKTSVAPKRNFSSSAGHDDAYEAAKWEKITYLGIASCTALAV 60

Query: 61 FILSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVK 97
          ++LSKGH H E+PPAYP+MHIRNKEFPWGPDGLFEVK
Sbjct: 61 YVLSKGHHHGEDPPAYPHMHIRNKEFPWGPDGLFEVK 97

[Close]

BLAST of Sed0006730 vs. ExPASy TrEMBL
Match: A0A6J1KMD3 (cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111495450 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.4e-42
Identity = 83/98 (84.69%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 1  MAMATIRSNLVRAAVRGASRNPVQPKRGFSSAAHDDVRETAKWEKITYAGIASCTILAAF 60
          MAMATIRSNL+RAA+RGASRN  QPKRGF+S+AHDD  ETAKWEKITYAGIA+CT LA +
Sbjct: 1  MAMATIRSNLLRAAIRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60

Query: 61 ILSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKDH 99
           LSKGHPHHEEPPAYPY+HIRNKEFPWGPDGLFEVK H
Sbjct: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]

BLAST of Sed0006730 vs. ExPASy TrEMBL
Match: A0A6J1J8L1 (cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111482732 PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.1e-42
Identity = 83/98 (84.69%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 1  MAMATIRSNLVRAAVRGASRNPVQPKRGFSSAAHDDVRETAKWEKITYAGIASCTILAAF 60
          MAMA IRSNL+RAA RGASRNP QPKRGF+S+AHDD RETAKWEKITYAGI SC+ILA +
Sbjct: 1  MAMAMIRSNLLRAAFRGASRNPAQPKRGFASSAHDDARETAKWEKITYAGIVSCSILAFY 60

Query: 61 ILSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKDH 99
           LSKGHPH+EEPPAYPY+HIRNKEFPWGPDGLFEVK H
Sbjct: 61 NLSKGHPHYEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]

BLAST of Sed0006730 vs. ExPASy TrEMBL
Match: A0A1S3BPM0 (cytochrome c oxidase subunit 6a, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103491837 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.1e-42
Identity = 82/98 (83.67%), Postives = 91/98 (92.86%), Query Frame = 0


Query: 1  MAMATIRSNLVRAAVRGASRNPVQPKRGFSSAAHDDVRETAKWEKITYAGIASCTILAAF 60
          MAMA+IRSN +RAA+RGASRN VQPKRGF+S+AHDD RETAKWEKITYAGI +C+ILA +
Sbjct: 1  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY 60

Query: 61 ILSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKDH 99
           LSKGHPHHEEPPAYPY+HIRNKEFPWGPDGLFEVK H
Sbjct: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFEVKHH 98

[Close]

BLAST of Sed0006730 vs. ExPASy TrEMBL
Match: A0A0A0L3I0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G115610 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 5.3e-42
Identity = 82/96 (85.42%), Postives = 90/96 (93.75%), Query Frame = 0


Query: 3  MATIRSNLVRAAVRGASRNPVQPKRGFSSAAHDDVRETAKWEKITYAGIASCTILAAFIL 62
          MA+IRSNL+RAA+RGASRN VQPKRGF+S+AHDD RETAKWEKITYAGI +C+ILA + L
Sbjct: 1  MASIRSNLLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNL 60

Query: 63 SKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKDH 99
          SKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVK H
Sbjct: 61 SKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH 96

[Close]

BLAST of Sed0006730 vs. ExPASy TrEMBL
Match: A0A6J1C3V4 (cytochrome c oxidase subunit 6a, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111008246 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 5.3e-42
Identity = 82/98 (83.67%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 1  MAMATIRSNLVRAAVRGASRNPVQPKRGFSSAAHDDVRETAKWEKITYAGIASCTILAAF 60
          MAMATIRSNL+RAA RGAS+N  QPKRGF+S+AHDDVRETAKWEKITYAGI +CT LA +
Sbjct: 1  MAMATIRSNLLRAAFRGASQNSAQPKRGFASSAHDDVRETAKWEKITYAGIIACTTLAFY 60

Query: 61 ILSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKDH 99
           LSKGHPHHEEPPAYPY+HIRNKEFPWGPDGLFE K+H
Sbjct: 61 NLSKGHPHHEEPPAYPYLHIRNKEFPWGPDGLFETKEH 98

[Close]

BLAST of Sed0006730 vs. TAIR 10
Match: AT4G37830.1 (cytochrome c oxidase-related )

HSP 1 Score: 143.7 bits (361), Expect = 8.1e-35
Identity = 69/97 (71.13%), Postives = 76/97 (78.35%), Query Frame = 0


Query: 1  MAMATIRSNLVRAAVRGASRNPVQPKRGFSSAA-HDDVRETAKWEKITYAGIASCTILAA 60
          MA A +RS L RA  R A +  V PKR FSS+A HDD  E AKWEKITY GIASCT LA 
Sbjct: 1  MATAIVRSALSRAVTRAAPKTSVAPKRNFSSSAGHDDAYEAAKWEKITYLGIASCTALAV 60

Query: 61 FILSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVK 97
          ++LSKGH H E+PPAYP+MHIRNKEFPWGPDGLFEVK
Sbjct: 61 YVLSKGHHHGEDPPAYPHMHIRNKEFPWGPDGLFEVK 97

[Close]

BLAST of Sed0006730 vs. TAIR 10
Match: AT4G37830.2 (cytochrome c oxidase-related )

HSP 1 Score: 115.2 bits (287), Expect = 3.1e-26
Identity = 60/97 (61.86%), Postives = 66/97 (68.04%), Query Frame = 0


Query: 1  MAMATIRSNLVRAAVRGASRNPVQPKRGFSSAA-HDDVRETAKWEKITYAGIASCTILAA 60
          MA A +RS L RA  R A +  V PKR FSS+A HDD  E AKWEKITY GIASCT LA 
Sbjct: 1  MATAIVRSALSRAVTRAAPKTSVAPKRNFSSSAGHDDAYEAAKWEKITYLGIASCTALAV 60

Query: 61 FILSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVK 97
          ++LSKGH H E+PP          EFPWGPDGLFEVK
Sbjct: 61 YVLSKGHHHGEDPP----------EFPWGPDGLFEVK 87

The following BLAST results are available for this feature:

BLAST of Sed0006730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905594.1	4.4e-43	86.73	cytochrome c oxidase subunit 6a, mitochondrial [Benincasa hispida]	[more]
XP_011650608.1	1.3e-42	85.71	cytochrome c oxidase subunit 6a, mitochondrial isoform X2 [Cucumis sativus] >KAE...	[more]
XP_023001309.1	4.9e-42	84.69	cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita maxima]	[more]
XP_023551866.1	6.4e-42	84.69	cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita pepo subsp. pepo]	[more]
XP_022984430.1	6.4e-42	84.69	cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita maxima]	[more]

BLAST of Sed0006730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9T070	1.1e-33	71.13	Cytochrome c oxidase subunit 6a, mitochondrial OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Sed0006730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KMD3	2.4e-42	84.69	cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1J8L1	3.1e-42	84.69	cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita maxima OX=3661 ...	[more]
A0A1S3BPM0	4.1e-42	83.67	cytochrome c oxidase subunit 6a, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0L3I0	5.3e-42	85.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G115610 PE=3 SV=1	[more]
A0A6J1C3V4	5.3e-42	83.67	cytochrome c oxidase subunit 6a, mitochondrial OS=Momordica charantia OX=3673 GN...	[more]

BLAST of Sed0006730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37830.1	8.1e-35	71.13	cytochrome c oxidase-related	[more]
AT4G37830.2	3.1e-26	61.86	cytochrome c oxidase-related	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001349	Cytochrome c oxidase, subunit VIa	PIRSF	PIRSF000277	COX_VIa	coord: 1..99 e-value: 2.7E-22 score: 77.1
IPR001349	Cytochrome c oxidase, subunit VIa	PFAM	PF02046	COX6A	coord: 37..88 e-value: 1.6E-5 score: 25.3
IPR001349	Cytochrome c oxidase, subunit VIa	PANTHER	PTHR11504	CYTOCHROME C OXIDASE POLYPEPTIDE VIA	coord: 1..99
IPR036418	Cytochrome c oxidase, subunit VIa superfamily	GENE3D	4.10.95.10	Cytochrome c oxidase, subunit VIa	coord: 29..98 e-value: 7.6E-14 score: 53.4
IPR036418	Cytochrome c oxidase, subunit VIa superfamily	SUPERFAMILY	81411	Mitochondrial cytochrome c oxidase subunit VIa	coord: 30..96
None	No IPR available	PANTHER	PTHR11504:SF6	CYTOCHROME C OXIDASE SUBUNIT 6A1-RELATED	coord: 1..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006730.1	Sed0006730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006123	mitochondrial electron transport, cytochrome c to oxygen
biological_process	GO:1902600	proton transmembrane transport
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0005751	mitochondrial respiratory chain complex IV
cellular_component	GO:0005743	mitochondrial inner membrane
molecular_function	GO:0004129	cytochrome-c oxidase activity
molecular_function	GO:0030234	enzyme regulator activity