Sed0006534 (gene) Chayote v1

Overview


Name	Sed0006534
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Proteasome subunit beta
Location	LG01: 6723977 .. 6726933 (+)
RNA-Seq Expression	Sed0006534
Synteny	Sed0006534

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGACGACGTTTAGGGTGATAGAGGAAAAGGGTCTGAAAAATCATTTCTTGAGCGAAGGGAAAAGAAGAGCTCTCTTTACAAAGGGTTTGTGCGACGTTGGACATTCATTTGGTAAATCCATTTGGCTGAAAATGAGCGTAAGTACATTCGATCAAACCCTAATTCTGTCTTCTTCTTCACATTCCGATTCTAACATTTTTGATGTCTCGATTTTTCAATGCAGGCCGTTCATAATCCAATCCAAAGAACACAGTACGTTTTTGTAGATTCCTTTTGGTTTGGATATAAGATTTGGTTTGTTTATAACTCTGTGTTGTTCGATAGGTATCCCTATGTGACTGGTACATCCGTTGTTGCCATTAAGTACAAAGATGGGATTTTAATGGCTGCCGATTTGGGAGGTCAGTGGATACCCTTTTCCGTTTTCCGTTTTCTTTTATTTTAGTATCCGTTGTGGTTGAAGACTTGAGTTTTGAAGGTGTGCTCCCCTCGAGGTTCTAGTTTCGAGAGTGATTTGAGATATTAATTTGTCGGCATGTCTGGTGTCTTCATACCTTCAGGGTCTCCCAATGTCTGGCCTAGGGACAAGCGTGGTTAAAAATGAAAAAAAAAAATCAATAACTACTATCCCTAAGGGATGACATAGTGGTTGAAGGCTTGGATTTTGAAGGTGTGCTTCCTTCAAAACCCGAGTTTCGAAATTCACTTGTGACATTAATTTGTATATACCTCCCGTGTCTCCATTCCTTTAATGTCTACGGCTGTTTGGCCTAGGACAGGCGAGGGTATAGTGGAGCGAAGCTTCAATTTCCCGATTTTAAAGAAAAATAATAACTAATAACTGCCAATCTTCATCAACTTTCTTTCAACAATGCATTCCTTCATGATGAAGATTGGCAGCATGTTTTCAGTTTTTGTTTGTTGATTGATGATAGCAAAACACTTCTTGAAATGATGGAGGATTTGGGTCTGTGTTTTACTTATATGGTGTTTTAACTGCAGGCTCTTATGGTTCCACACTGAGGTATAAGAGTGTGGAGCGAGTCAAAGCTATTGGAAAACATTCTCTTCTTGGTGCAAGTGGAGAAATTAGTGATTTTCAGGAATTGTTGCGAAATCTTGACGATCTCATGTAAGTGTATCTATATGTTTGTTGGGAGTTTATGGTGTTCTGGATTGGAATTCTGTTGCTTCTATTGTGGATCATTTTTATATAAAAAAAAACATTTCATATTGTGGATATATTTAGTCTCTTTTTCATTTAGATTTTGAGCGAAAAATCTTATTGTATTGAATGGTGTAGCTTGTTTGACAACATGTGGGATGATGGAAATTCTCTGGGGCCCAAGGAGATCCATAGCTACTTGACTCGAGTGATGTATAACAGGCGGAACAAGTTCAACCCACTTTGGAACTCACTTGTTCTTGGTGGAGTAAAGAATGGGCAAAAGTATCTTGGCACGGTAGATCTTTGGTTCTCATTCTAAATAATTATAAATTTTGATGCTTCAAAGCTTACAGTATACCATATTTATTCAGGTTAGTATGATAGGTGTACATTTTGAAGATGATCATGTTACTACTGGTTTCGGTAACCATCTTGCACGGCCGATTCTTCGTGACGAGTGGCATGAGAACCTGACTTTTGAAGAAGGTGTGAAATTGCTGGAGAAATGCATGAGAGTACTCTTATACCGTGATAGGTCTGCTGTCAACAAGCTCCAGGTTTGGATCTTGTTAGAGCTACATTTATCACTTTTATTTTCATATATATATATATATATATTTGTGACTGTCCAATCGACTTTTTTTTATTCGTGGTTGTCTTGCCCAGTTTACGGGGACCTCGACTATTTCATGGACATATTGCCCAAAGAAACTCGTAGGTGACCACCATGGTCTAGTCGGCTTATGCATACCCACTAGTTTCGCTGAACATCCATCCAACAAATAACACTGTGAAACGCATACGATTTTTCAATATTTTACGCCCGTCCTTAGGTTAGGTACCGGAGACATCGAAGGAGTAATGTCATAAGTGAGTCTCGAACTCGGGACCCAGAAAGGGAGCATACCTTCAAAATCCAAGTTTTCACGGTGCCACCCACCCCTTGGGGACATACGATTTTTCAATATTAACTCTCCACAATGGGATTTGAATCTATTTTTCTCCCCCAAGTTCCTTCCTTATAAGTTATGGGTGTCCGTATGTCCGTAGATCATATCATCATACTTTGTAATTACTGGCTTTGTTTAATCATTTTTGTAGTTAGTTTTGGAATTCTCTTTGTGGTCTTGTATTTTGTATTCCCTTGTACTAAAATTAATTCAAATAGGAATACTGGTTGAATACTTGTGCTAAAACTAATGCAAAGATATATATTTTGACGAACCCAATGCAAAGATATATATTTTGACGAACCCAAGCTATCCCATGTTGGGTCACTGATTATAGCTCCTCCATCCACCATCTCGTTTGTAGTTTCTGGAACTTCTTTTTACTTTTCACTGTTTATAGACTTCAATGACTGGTGTTGTGTTATTCTCATCATCTCATGTAAAATTTGGAATTCAGATAGCAAAAATAACTGAAGAAGGCGTGACAATCTCCCAGCCTTACTCTTTGAAAACATTCTGGAACTATGCTGCTTTTGAGAATCCAACTTCTGGTGCTGAAGGGTCATGGTAGATGGAAGCGATCTTTTTCGTCTCAGATTCATTTTTGTGAATCGCGCATCTAATCAGGACGAGTGAAACGTTTGTTATATCGAACTTAGATGCATCTTAGATACTTGTTCTTATTTTGGATTTGTGTTAGAGTGTGCACTTGAACTATCTGTCTATGTCCAATTGACGCATGTTGAGTTGATTTTCTGGACTTTTTTTTCTTTATTAGATTGCCTACTTTTGTGCTTGACATGGCTTTGAATTAATTGATACTGGTTCGATTTGAGAA

mRNA sequence

GCGACGACGTTTAGGGTGATAGAGGAAAAGGGTCTGAAAAATCATTTCTTGAGCGAAGGGAAAAGAAGAGCTCTCTTTACAAAGGGTTTGTGCGACGTTGGACATTCATTTGGTAAATCCATTTGGCTGAAAATGAGCGCCGTTCATAATCCAATCCAAAGAACACAGTATCCCTATGTGACTGGTACATCCGTTGTTGCCATTAAGTACAAAGATGGGATTTTAATGGCTGCCGATTTGGGAGGCTCTTATGGTTCCACACTGAGGTATAAGAGTGTGGAGCGAGTCAAAGCTATTGGAAAACATTCTCTTCTTGGTGCAAGTGGAGAAATTAGTGATTTTCAGGAATTGTTGCGAAATCTTGACGATCTCATCTTGTTTGACAACATGTGGGATGATGGAAATTCTCTGGGGCCCAAGGAGATCCATAGCTACTTGACTCGAGTGATGTATAACAGGCGGAACAAGTTCAACCCACTTTGGAACTCACTTGTTCTTGGTGGAGTAAAGAATGGGCAAAAGTATCTTGGCACGGTTAGTATGATAGGTGTACATTTTGAAGATGATCATGTTACTACTGGTTTCGGTAACCATCTTGCACGGCCGATTCTTCGTGACGAGTGGCATGAGAACCTGACTTTTGAAGAAGGTGTGAAATTGCTGGAGAAATGCATGAGAGTACTCTTATACCGTGATAGGTCTGCTGTCAACAAGCTCCAGATAGCAAAAATAACTGAAGAAGGCGTGACAATCTCCCAGCCTTACTCTTTGAAAACATTCTGGAACTATGCTGCTTTTGAGAATCCAACTTCTGGTGCTGAAGGGTCATGGTAGATGGAAGCGATCTTTTTCGTCTCAGATTCATTTTTGTGAATCGCGCATCTAATCAGGACGAGTGAAACGTTTGTTATATCGAACTTAGATGCATCTTAGATACTTGTTCTTATTTTGGATTTGTGTTAGAGTGTGCACTTGAACTATCTGTCTATGTCCAATTGACGCATGTTGAGTTGATTTTCTGGACTTTTTTTTCTTTATTAGATTGCCTACTTTTGTGCTTGACATGGCTTTGAATTAATTGATACTGGTTCGATTTGAGAA

Coding sequence (CDS)

ATGAGCGCCGTTCATAATCCAATCCAAAGAACACAGTATCCCTATGTGACTGGTACATCCGTTGTTGCCATTAAGTACAAAGATGGGATTTTAATGGCTGCCGATTTGGGAGGCTCTTATGGTTCCACACTGAGGTATAAGAGTGTGGAGCGAGTCAAAGCTATTGGAAAACATTCTCTTCTTGGTGCAAGTGGAGAAATTAGTGATTTTCAGGAATTGTTGCGAAATCTTGACGATCTCATCTTGTTTGACAACATGTGGGATGATGGAAATTCTCTGGGGCCCAAGGAGATCCATAGCTACTTGACTCGAGTGATGTATAACAGGCGGAACAAGTTCAACCCACTTTGGAACTCACTTGTTCTTGGTGGAGTAAAGAATGGGCAAAAGTATCTTGGCACGGTTAGTATGATAGGTGTACATTTTGAAGATGATCATGTTACTACTGGTTTCGGTAACCATCTTGCACGGCCGATTCTTCGTGACGAGTGGCATGAGAACCTGACTTTTGAAGAAGGTGTGAAATTGCTGGAGAAATGCATGAGAGTACTCTTATACCGTGATAGGTCTGCTGTCAACAAGCTCCAGATAGCAAAAATAACTGAAGAAGGCGTGACAATCTCCCAGCCTTACTCTTTGAAAACATTCTGGAACTATGCTGCTTTTGAGAATCCAACTTCTGGTGCTGAAGGGTCATGGTAG

Protein sequence

MSAVHNPIQRTQYPYVTGTSVVAIKYKDGILMAADLGGSYGSTLRYKSVERVKAIGKHSLLGASGEISDFQELLRNLDDLILFDNMWDDGNSLGPKEIHSYLTRVMYNRRNKFNPLWNSLVLGGVKNGQKYLGTVSMIGVHFEDDHVTTGFGNHLARPILRDEWHENLTFEEGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYAAFENPTSGAEGSW

Homology

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BLAST of Sed0006534 vs. NCBI nr
Match: XP_023512003.1 (proteasome subunit beta type-4-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 457.6 bits (1176), Expect = 6.4e-125
Identity = 223/239 (93.31%), Postives = 229/239 (95.82%), Query Frame = 0


Query: 1   MSAVHN------PIQRTQYPYVTGTSVVAIKYKDGILMAADLGGSYGSTLRYKSVERVKA 60
           MSA H       PIQRTQYPYVTGTSVVAIKYKDGILM +DLGGSYGSTLRYKSVER+KA
Sbjct: 1   MSANHGLLCPEAPIQRTQYPYVTGTSVVAIKYKDGILMVSDLGGSYGSTLRYKSVERIKA 60

Query: 61  IGKHSLLGASGEISDFQELLRNLDDLILFDNMWDDGNSLGPKEIHSYLTRVMYNRRNKFN 120
           IGKHSLLGASGEISDFQELLRNLDDLIL+DNMWDDGN+LGPKEIHSYLTRVMYNRRNKFN
Sbjct: 61  IGKHSLLGASGEISDFQELLRNLDDLILYDNMWDDGNALGPKEIHSYLTRVMYNRRNKFN 120

Query: 121 PLWNSLVLGGVKNGQKYLGTVSMIGVHFEDDHVTTGFGNHLARPILRDEWHENLTFEEGV 180
           PLWNSLVLGGVKNGQKYLGTV+MIGV FEDDHVTTGFGNHLARPILRDEWHENLTFEEGV
Sbjct: 121 PLWNSLVLGGVKNGQKYLGTVNMIGVTFEDDHVTTGFGNHLARPILRDEWHENLTFEEGV 180

Query: 181 KLLEKCMRVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYAAFENPTSGAEGSW 234
           KLLEKCMRVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWNY+AFENPTSGAEGSW
Sbjct: 181 KLLEKCMRVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYSAFENPTSGAEGSW 239

[Close]

BLAST of Sed0006534 vs. NCBI nr
Match: XP_023512002.1 (proteasome subunit beta type-4-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 457.2 bits (1175), Expect = 8.4e-125
Identity = 219/227 (96.48%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 7   PIQRTQYPYVTGTSVVAIKYKDGILMAADLGGSYGSTLRYKSVERVKAIGKHSLLGASGE 66
           PIQRTQYPYVTGTSVVAIKYKDGILM +DLGGSYGSTLRYKSVER+KAIGKHSLLGASGE
Sbjct: 19  PIQRTQYPYVTGTSVVAIKYKDGILMVSDLGGSYGSTLRYKSVERIKAIGKHSLLGASGE 78

Query: 67  ISDFQELLRNLDDLILFDNMWDDGNSLGPKEIHSYLTRVMYNRRNKFNPLWNSLVLGGVK 126
           ISDFQELLRNLDDLIL+DNMWDDGN+LGPKEIHSYLTRVMYNRRNKFNPLWNSLVLGGVK
Sbjct: 79  ISDFQELLRNLDDLILYDNMWDDGNALGPKEIHSYLTRVMYNRRNKFNPLWNSLVLGGVK 138

Query: 127 NGQKYLGTVSMIGVHFEDDHVTTGFGNHLARPILRDEWHENLTFEEGVKLLEKCMRVLLY 186
           NGQKYLGTV+MIGV FEDDHVTTGFGNHLARPILRDEWHENLTFEEGVKLLEKCMRVLLY
Sbjct: 139 NGQKYLGTVNMIGVTFEDDHVTTGFGNHLARPILRDEWHENLTFEEGVKLLEKCMRVLLY 198

Query: 187 RDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYAAFENPTSGAEGSW 234
           RDRSAVNKLQIAKITEEGVTISQPYSLKTFWNY+AFENPTSGAEGSW
Sbjct: 199 RDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYSAFENPTSGAEGSW 245

[Close]

BLAST of Sed0006534 vs. NCBI nr
Match: XP_023007281.1 (proteasome subunit beta type-4-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 456.4 bits (1173), Expect = 1.4e-124
Identity = 222/239 (92.89%), Postives = 230/239 (96.23%), Query Frame = 0


Query: 1   MSAVHN------PIQRTQYPYVTGTSVVAIKYKDGILMAADLGGSYGSTLRYKSVERVKA 60
           MSA H+      PIQRTQYPYVTGTSVVAIKYKDGILM +DLGGSYGSTLRYKSVER+KA
Sbjct: 1   MSANHSILCPEAPIQRTQYPYVTGTSVVAIKYKDGILMVSDLGGSYGSTLRYKSVERIKA 60

Query: 61  IGKHSLLGASGEISDFQELLRNLDDLILFDNMWDDGNSLGPKEIHSYLTRVMYNRRNKFN 120
           IGKHSLLGASGEISDFQELLRNLD+LIL+DNMWDDGN+LGPKEIHSYLTRVMYNRRNKFN
Sbjct: 61  IGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNALGPKEIHSYLTRVMYNRRNKFN 120

Query: 121 PLWNSLVLGGVKNGQKYLGTVSMIGVHFEDDHVTTGFGNHLARPILRDEWHENLTFEEGV 180
           PLWNSLVLGGVKNGQKYLGTV+MIGV FEDDHVTTGFGNHLARPILRDEWHENLT+EEGV
Sbjct: 121 PLWNSLVLGGVKNGQKYLGTVNMIGVTFEDDHVTTGFGNHLARPILRDEWHENLTYEEGV 180

Query: 181 KLLEKCMRVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYAAFENPTSGAEGSW 234
           KLLEKCMRVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYAAFENPTSGAEGSW
Sbjct: 181 KLLEKCMRVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYAAFENPTSGAEGSW 239

[Close]

BLAST of Sed0006534 vs. NCBI nr
Match: XP_022948017.1 (proteasome subunit beta type-4-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 456.1 bits (1172), Expect = 1.9e-124
Identity = 222/239 (92.89%), Postives = 229/239 (95.82%), Query Frame = 0


Query: 1   MSAVHN------PIQRTQYPYVTGTSVVAIKYKDGILMAADLGGSYGSTLRYKSVERVKA 60
           MSA H       PIQRTQYPYVTGTSVVAIKYKDGILM +DLGGSYGSTLRYKSVER+KA
Sbjct: 1   MSANHGILCPEAPIQRTQYPYVTGTSVVAIKYKDGILMVSDLGGSYGSTLRYKSVERIKA 60

Query: 61  IGKHSLLGASGEISDFQELLRNLDDLILFDNMWDDGNSLGPKEIHSYLTRVMYNRRNKFN 120
           IGKHSLLGASGEISDFQELLRNLD+LIL+DNMWDDGN+LGPKEIHSYLTRVMYNRRNKFN
Sbjct: 61  IGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNALGPKEIHSYLTRVMYNRRNKFN 120

Query: 121 PLWNSLVLGGVKNGQKYLGTVSMIGVHFEDDHVTTGFGNHLARPILRDEWHENLTFEEGV 180
           PLWNSLVLGGVKNGQKYLGTV+MIGV FEDDHVTTGFGNHLARPILRDEWHENLT+EEGV
Sbjct: 121 PLWNSLVLGGVKNGQKYLGTVNMIGVTFEDDHVTTGFGNHLARPILRDEWHENLTYEEGV 180

Query: 181 KLLEKCMRVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYAAFENPTSGAEGSW 234
           KLLEKCMRVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYAAFENPTSGAEGSW
Sbjct: 181 KLLEKCMRVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYAAFENPTSGAEGSW 239

[Close]

BLAST of Sed0006534 vs. NCBI nr
Match: XP_022944643.1 (proteasome subunit beta type-4-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 456.1 bits (1172), Expect = 1.9e-124
Identity = 222/239 (92.89%), Postives = 229/239 (95.82%), Query Frame = 0


Query: 1   MSAVHN------PIQRTQYPYVTGTSVVAIKYKDGILMAADLGGSYGSTLRYKSVERVKA 60
           MSA H       PIQRTQYPYVTGTSVVAIKYKDGILM +DLGGSYGSTLRYKSVER+KA
Sbjct: 1   MSANHGLLCPEAPIQRTQYPYVTGTSVVAIKYKDGILMVSDLGGSYGSTLRYKSVERIKA 60

Query: 61  IGKHSLLGASGEISDFQELLRNLDDLILFDNMWDDGNSLGPKEIHSYLTRVMYNRRNKFN 120
           IGKHSLLGASGEISDFQELLRNLD+LIL+DNMWDDGN+LGPKEIHSYLTRVMYNRRNKFN
Sbjct: 61  IGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNALGPKEIHSYLTRVMYNRRNKFN 120

Query: 121 PLWNSLVLGGVKNGQKYLGTVSMIGVHFEDDHVTTGFGNHLARPILRDEWHENLTFEEGV 180
           PLWNSLVLGGVKNGQKYLGTV+MIGV FEDDHVTTGFGNHLARPILRDEWHENLTFEEGV
Sbjct: 121 PLWNSLVLGGVKNGQKYLGTVNMIGVTFEDDHVTTGFGNHLARPILRDEWHENLTFEEGV 180

Query: 181 KLLEKCMRVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYAAFENPTSGAEGSW 234
           KLLEKCMRVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWNY+AFENPTSGAEGSW
Sbjct: 181 KLLEKCMRVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYSAFENPTSGAEGSW 239

[Close]

BLAST of Sed0006534 vs. ExPASy Swiss-Prot
Match: Q7DLR9 (Proteasome subunit beta type-4 OS=Arabidopsis thaliana OX=3702 GN=PBG1 PE=1 SV=2)

HSP 1 Score: 413.3 bits (1061), Expect = 1.8e-114
Identity = 193/233 (82.83%), Postives = 214/233 (91.85%), Query Frame = 0


Query: 1   MSAVHNPIQRTQYPYVTGTSVVAIKYKDGILMAADLGGSYGSTLRYKSVERVKAIGKHSL 60
           M       QRT YPYVTGTS+VAIKYKDG+LMA+D+GGSYGSTLRYK++ERVKAIGKHSL
Sbjct: 14  MKIAEEESQRTLYPYVTGTSIVAIKYKDGVLMASDMGGSYGSTLRYKNIERVKAIGKHSL 73

Query: 61  LGASGEISDFQELLRNLDDLILFDNMWDDGNSLGPKEIHSYLTRVMYNRRNKFNPLWNSL 120
           LGASGEISDFQE+LR LD+L L DNMWDDGNSLGPKEIH+YLTRVMYNRRNKFNPLWN+L
Sbjct: 74  LGASGEISDFQEILRYLDELTLNDNMWDDGNSLGPKEIHNYLTRVMYNRRNKFNPLWNTL 133

Query: 121 VLGGVKNGQKYLGTVSMIGVHFEDDHVTTGFGNHLARPILRDEWHENLTFEEGVKLLEKC 180
           VLGGVKNG+ YLG VSMIGV FEDDHV TGFGNHLARPILRDEWH +L+FE+GVKLLEKC
Sbjct: 134 VLGGVKNGKSYLGMVSMIGVSFEDDHVATGFGNHLARPILRDEWHADLSFEDGVKLLEKC 193

Query: 181 MRVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYAAFENPTSGAEGSW 234
           MRVLLYRDRSA+NKLQIAKITEEGVT+SQPYSLKT+W +++F NPT+GA GSW
Sbjct: 194 MRVLLYRDRSAINKLQIAKITEEGVTVSQPYSLKTYWEFSSFHNPTAGAAGSW 246

[Close]

BLAST of Sed0006534 vs. ExPASy Swiss-Prot
Match: Q3T108 (Proteasome subunit beta type-4 OS=Bos taurus OX=9913 GN=PSMB4 PE=1 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 5.6e-55
Identity = 101/217 (46.54%), Postives = 154/217 (70.97%), Query Frame = 0


Query: 6   NPIQRTQYPYVTGTSVVAIKYKDGILMAADLGGSYGSTLRYKSVERVKAIGKHSLLGASG 65
           +PI RTQ P VTGTSV+ +K++ G+++AAD+ GSYGS  R++++ R+  +   ++LGASG
Sbjct: 41  SPITRTQNPMVTGTSVLGLKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASG 100

Query: 66  EISDFQELLRNLDDLILFDNMWDDGNSLGPKEIHSYLTRVMYNRRNKFNPLWNSLVLGGV 125
           + +DFQ L + L  +++ + +  DG+S  PK IHS+LTR MY+RR+K NPLWN++V+GG 
Sbjct: 101 DYADFQYLKQVLGQMVIDEELLGDGHSYSPKAIHSWLTRAMYSRRSKMNPLWNTMVIGGY 160

Query: 126 KNGQKYLGTVSMIGVHFEDDHVTTGFGNHLARPILRD--EWHENLTFEEGVKLLEKCMRV 185
            +G+ +LG V M+GV +E   + TG+G +LA+P+LR+  E    L+  E  +L+E+CMRV
Sbjct: 161 ADGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRV 220

Query: 186 LLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYA 221
           L YRD  + N+ QIA +TE+GV I  P S +T W+ A
Sbjct: 221 LYYRDARSYNRFQIATVTEKGVEIEGPLSAETNWDIA 257

[Close]

BLAST of Sed0006534 vs. ExPASy Swiss-Prot
Match: P34067 (Proteasome subunit beta type-4 OS=Rattus norvegicus OX=10116 GN=Psmb4 PE=1 SV=2)

HSP 1 Score: 214.9 bits (546), Expect = 9.5e-55
Identity = 102/222 (45.95%), Postives = 154/222 (69.37%), Query Frame = 0


Query: 1   MSAVHNPIQRTQYPYVTGTSVVAIKYKDGILMAADLGGSYGSTLRYKSVERVKAIGKHSL 60
           MSA   PI RTQ P VTGTSV+ +K+  G+++AAD+ GSYGS  R++++ R+  +   ++
Sbjct: 35  MSAPARPITRTQNPMVTGTSVLGVKFDCGVVIAADMLGSYGSLARFRNISRIMRVNDSTM 94

Query: 61  LGASGEISDFQELLRNLDDLILFDNMWDDGNSLGPKEIHSYLTRVMYNRRNKFNPLWNSL 120
           LGASG+ +DFQ L + L  +++ + ++ DG+S  P+ IHS+LTR MY+RR+K NPLWN+ 
Sbjct: 95  LGASGDYADFQYLKQVLGQMVIDEELFGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTK 154

Query: 121 VLGGVKNGQKYLGTVSMIGVHFEDDHVTTGFGNHLARPILRD--EWHENLTFEEGVKLLE 180
           V+GG   G+ +LG V M+GV +E   + TG+G +LA+P+LR+  E    L+  E  +L+E
Sbjct: 155 VIGGYAGGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVE 214

Query: 181 KCMRVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYA 221
           +CMRVL YRD  + N+ Q+A +TE+GV I  P S +T W+ A
Sbjct: 215 RCMRVLYYRDARSYNRFQVATVTEKGVEIEGPLSAQTNWDIA 256

[Close]

BLAST of Sed0006534 vs. ExPASy Swiss-Prot
Match: P28070 (Proteasome subunit beta type-4 OS=Homo sapiens OX=9606 GN=PSMB4 PE=1 SV=4)

HSP 1 Score: 213.8 bits (543), Expect = 2.1e-54
Identity = 100/216 (46.30%), Postives = 152/216 (70.37%), Query Frame = 0


Query: 7   PIQRTQYPYVTGTSVVAIKYKDGILMAADLGGSYGSTLRYKSVERVKAIGKHSLLGASGE 66
           PI RTQ P VTGTSV+ +K++ G+++AAD+ GSYGS  R++++ R+  +   ++LGASG+
Sbjct: 42  PITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGD 101

Query: 67  ISDFQELLRNLDDLILFDNMWDDGNSLGPKEIHSYLTRVMYNRRNKFNPLWNSLVLGGVK 126
            +DFQ L + L  +++ + +  DG+S  P+ IHS+LTR MY+RR+K NPLWN++V+GG  
Sbjct: 102 YADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 161

Query: 127 NGQKYLGTVSMIGVHFEDDHVTTGFGNHLARPILRD--EWHENLTFEEGVKLLEKCMRVL 186
           +G+ +LG V M+GV +E   + TG+G +LA+P+LR+  E    L+  E   L+E+CMRVL
Sbjct: 162 DGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVL 221

Query: 187 LYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYA 221
            YRD  + N+ QIA +TE+GV I  P S +T W+ A
Sbjct: 222 YYRDARSYNRFQIATVTEKGVEIEGPLSTETNWDIA 257

[Close]

BLAST of Sed0006534 vs. ExPASy Swiss-Prot
Match: P99026 (Proteasome subunit beta type-4 OS=Mus musculus OX=10090 GN=Psmb4 PE=1 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.8e-54
Identity = 100/216 (46.30%), Postives = 152/216 (70.37%), Query Frame = 0


Query: 7   PIQRTQYPYVTGTSVVAIKYKDGILMAADLGGSYGSTLRYKSVERVKAIGKHSLLGASGE 66
           PI RTQ P VTGTSV+ +K+  G+++AAD+ GSYGS  R++++ R+  +   ++LGASG+
Sbjct: 42  PITRTQNPMVTGTSVLGVKFDGGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGD 101

Query: 67  ISDFQELLRNLDDLILFDNMWDDGNSLGPKEIHSYLTRVMYNRRNKFNPLWNSLVLGGVK 126
            +DFQ L + L  +++ + +  DG+S  P+ IHS+LTR MY+RR+K NPLWN++V+GG  
Sbjct: 102 YADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 161

Query: 127 NGQKYLGTVSMIGVHFEDDHVTTGFGNHLARPILRD--EWHENLTFEEGVKLLEKCMRVL 186
           +G+ +LG V M+GV +E   + TG+G +LA+P+LR+  E    L+  E  +L+E+CMRVL
Sbjct: 162 DGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVL 221

Query: 187 LYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYA 221
            YRD  + N+ QIA +TE+GV I  P S +T W+ A
Sbjct: 222 YYRDARSYNRFQIATVTEKGVEIEGPLSAQTNWDIA 257

[Close]

BLAST of Sed0006534 vs. ExPASy TrEMBL
Match: A0A6J1L038 (Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111499823 PE=3 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 6.9e-125
Identity = 222/239 (92.89%), Postives = 230/239 (96.23%), Query Frame = 0


Query: 1   MSAVHN------PIQRTQYPYVTGTSVVAIKYKDGILMAADLGGSYGSTLRYKSVERVKA 60
           MSA H+      PIQRTQYPYVTGTSVVAIKYKDGILM +DLGGSYGSTLRYKSVER+KA
Sbjct: 1   MSANHSILCPEAPIQRTQYPYVTGTSVVAIKYKDGILMVSDLGGSYGSTLRYKSVERIKA 60

Query: 61  IGKHSLLGASGEISDFQELLRNLDDLILFDNMWDDGNSLGPKEIHSYLTRVMYNRRNKFN 120
           IGKHSLLGASGEISDFQELLRNLD+LIL+DNMWDDGN+LGPKEIHSYLTRVMYNRRNKFN
Sbjct: 61  IGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNALGPKEIHSYLTRVMYNRRNKFN 120

Query: 121 PLWNSLVLGGVKNGQKYLGTVSMIGVHFEDDHVTTGFGNHLARPILRDEWHENLTFEEGV 180
           PLWNSLVLGGVKNGQKYLGTV+MIGV FEDDHVTTGFGNHLARPILRDEWHENLT+EEGV
Sbjct: 121 PLWNSLVLGGVKNGQKYLGTVNMIGVTFEDDHVTTGFGNHLARPILRDEWHENLTYEEGV 180

Query: 181 KLLEKCMRVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYAAFENPTSGAEGSW 234
           KLLEKCMRVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYAAFENPTSGAEGSW
Sbjct: 181 KLLEKCMRVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYAAFENPTSGAEGSW 239

[Close]

BLAST of Sed0006534 vs. ExPASy TrEMBL
Match: A0A6J1FY93 (Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111449042 PE=3 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 9.0e-125
Identity = 222/239 (92.89%), Postives = 229/239 (95.82%), Query Frame = 0


Query: 1   MSAVHN------PIQRTQYPYVTGTSVVAIKYKDGILMAADLGGSYGSTLRYKSVERVKA 60
           MSA H       PIQRTQYPYVTGTSVVAIKYKDGILM +DLGGSYGSTLRYKSVER+KA
Sbjct: 1   MSANHGLLCPEAPIQRTQYPYVTGTSVVAIKYKDGILMVSDLGGSYGSTLRYKSVERIKA 60

Query: 61  IGKHSLLGASGEISDFQELLRNLDDLILFDNMWDDGNSLGPKEIHSYLTRVMYNRRNKFN 120
           IGKHSLLGASGEISDFQELLRNLD+LIL+DNMWDDGN+LGPKEIHSYLTRVMYNRRNKFN
Sbjct: 61  IGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNALGPKEIHSYLTRVMYNRRNKFN 120

Query: 121 PLWNSLVLGGVKNGQKYLGTVSMIGVHFEDDHVTTGFGNHLARPILRDEWHENLTFEEGV 180
           PLWNSLVLGGVKNGQKYLGTV+MIGV FEDDHVTTGFGNHLARPILRDEWHENLTFEEGV
Sbjct: 121 PLWNSLVLGGVKNGQKYLGTVNMIGVTFEDDHVTTGFGNHLARPILRDEWHENLTFEEGV 180

Query: 181 KLLEKCMRVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYAAFENPTSGAEGSW 234
           KLLEKCMRVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWNY+AFENPTSGAEGSW
Sbjct: 181 KLLEKCMRVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYSAFENPTSGAEGSW 239

[Close]

BLAST of Sed0006534 vs. ExPASy TrEMBL
Match: A0A6J1G813 (Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111451719 PE=3 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 9.0e-125
Identity = 222/239 (92.89%), Postives = 229/239 (95.82%), Query Frame = 0


Query: 1   MSAVHN------PIQRTQYPYVTGTSVVAIKYKDGILMAADLGGSYGSTLRYKSVERVKA 60
           MSA H       PIQRTQYPYVTGTSVVAIKYKDGILM +DLGGSYGSTLRYKSVER+KA
Sbjct: 1   MSANHGILCPEAPIQRTQYPYVTGTSVVAIKYKDGILMVSDLGGSYGSTLRYKSVERIKA 60

Query: 61  IGKHSLLGASGEISDFQELLRNLDDLILFDNMWDDGNSLGPKEIHSYLTRVMYNRRNKFN 120
           IGKHSLLGASGEISDFQELLRNLD+LIL+DNMWDDGN+LGPKEIHSYLTRVMYNRRNKFN
Sbjct: 61  IGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNALGPKEIHSYLTRVMYNRRNKFN 120

Query: 121 PLWNSLVLGGVKNGQKYLGTVSMIGVHFEDDHVTTGFGNHLARPILRDEWHENLTFEEGV 180
           PLWNSLVLGGVKNGQKYLGTV+MIGV FEDDHVTTGFGNHLARPILRDEWHENLT+EEGV
Sbjct: 121 PLWNSLVLGGVKNGQKYLGTVNMIGVTFEDDHVTTGFGNHLARPILRDEWHENLTYEEGV 180

Query: 181 KLLEKCMRVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYAAFENPTSGAEGSW 234
           KLLEKCMRVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYAAFENPTSGAEGSW
Sbjct: 181 KLLEKCMRVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYAAFENPTSGAEGSW 239

[Close]

BLAST of Sed0006534 vs. ExPASy TrEMBL
Match: A0A6J1L2I8 (Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111499823 PE=3 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 1.2e-124
Identity = 218/227 (96.04%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 7   PIQRTQYPYVTGTSVVAIKYKDGILMAADLGGSYGSTLRYKSVERVKAIGKHSLLGASGE 66
           PIQRTQYPYVTGTSVVAIKYKDGILM +DLGGSYGSTLRYKSVER+KAIGKHSLLGASGE
Sbjct: 19  PIQRTQYPYVTGTSVVAIKYKDGILMVSDLGGSYGSTLRYKSVERIKAIGKHSLLGASGE 78

Query: 67  ISDFQELLRNLDDLILFDNMWDDGNSLGPKEIHSYLTRVMYNRRNKFNPLWNSLVLGGVK 126
           ISDFQELLRNLD+LIL+DNMWDDGN+LGPKEIHSYLTRVMYNRRNKFNPLWNSLVLGGVK
Sbjct: 79  ISDFQELLRNLDELILYDNMWDDGNALGPKEIHSYLTRVMYNRRNKFNPLWNSLVLGGVK 138

Query: 127 NGQKYLGTVSMIGVHFEDDHVTTGFGNHLARPILRDEWHENLTFEEGVKLLEKCMRVLLY 186
           NGQKYLGTV+MIGV FEDDHVTTGFGNHLARPILRDEWHENLT+EEGVKLLEKCMRVLLY
Sbjct: 139 NGQKYLGTVNMIGVTFEDDHVTTGFGNHLARPILRDEWHENLTYEEGVKLLEKCMRVLLY 198

Query: 187 RDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYAAFENPTSGAEGSW 234
           RDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYAAFENPTSGAEGSW
Sbjct: 199 RDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYAAFENPTSGAEGSW 245

[Close]

BLAST of Sed0006534 vs. ExPASy TrEMBL
Match: A0A6J1G834 (Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111451719 PE=3 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 1.2e-124
Identity = 218/227 (96.04%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 7   PIQRTQYPYVTGTSVVAIKYKDGILMAADLGGSYGSTLRYKSVERVKAIGKHSLLGASGE 66
           PIQRTQYPYVTGTSVVAIKYKDGILM +DLGGSYGSTLRYKSVER+KAIGKHSLLGASGE
Sbjct: 19  PIQRTQYPYVTGTSVVAIKYKDGILMVSDLGGSYGSTLRYKSVERIKAIGKHSLLGASGE 78

Query: 67  ISDFQELLRNLDDLILFDNMWDDGNSLGPKEIHSYLTRVMYNRRNKFNPLWNSLVLGGVK 126
           ISDFQELLRNLD+LIL+DNMWDDGN+LGPKEIHSYLTRVMYNRRNKFNPLWNSLVLGGVK
Sbjct: 79  ISDFQELLRNLDELILYDNMWDDGNALGPKEIHSYLTRVMYNRRNKFNPLWNSLVLGGVK 138

Query: 127 NGQKYLGTVSMIGVHFEDDHVTTGFGNHLARPILRDEWHENLTFEEGVKLLEKCMRVLLY 186
           NGQKYLGTV+MIGV FEDDHVTTGFGNHLARPILRDEWHENLT+EEGVKLLEKCMRVLLY
Sbjct: 139 NGQKYLGTVNMIGVTFEDDHVTTGFGNHLARPILRDEWHENLTYEEGVKLLEKCMRVLLY 198

Query: 187 RDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYAAFENPTSGAEGSW 234
           RDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYAAFENPTSGAEGSW
Sbjct: 199 RDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYAAFENPTSGAEGSW 245

[Close]

BLAST of Sed0006534 vs. TAIR 10
Match: AT1G56450.1 (20S proteasome beta subunit G1 )

HSP 1 Score: 413.3 bits (1061), Expect = 1.3e-115
Identity = 193/233 (82.83%), Postives = 214/233 (91.85%), Query Frame = 0


Query: 1   MSAVHNPIQRTQYPYVTGTSVVAIKYKDGILMAADLGGSYGSTLRYKSVERVKAIGKHSL 60
           M       QRT YPYVTGTS+VAIKYKDG+LMA+D+GGSYGSTLRYK++ERVKAIGKHSL
Sbjct: 14  MKIAEEESQRTLYPYVTGTSIVAIKYKDGVLMASDMGGSYGSTLRYKNIERVKAIGKHSL 73

Query: 61  LGASGEISDFQELLRNLDDLILFDNMWDDGNSLGPKEIHSYLTRVMYNRRNKFNPLWNSL 120
           LGASGEISDFQE+LR LD+L L DNMWDDGNSLGPKEIH+YLTRVMYNRRNKFNPLWN+L
Sbjct: 74  LGASGEISDFQEILRYLDELTLNDNMWDDGNSLGPKEIHNYLTRVMYNRRNKFNPLWNTL 133

Query: 121 VLGGVKNGQKYLGTVSMIGVHFEDDHVTTGFGNHLARPILRDEWHENLTFEEGVKLLEKC 180
           VLGGVKNG+ YLG VSMIGV FEDDHV TGFGNHLARPILRDEWH +L+FE+GVKLLEKC
Sbjct: 134 VLGGVKNGKSYLGMVSMIGVSFEDDHVATGFGNHLARPILRDEWHADLSFEDGVKLLEKC 193

Query: 181 MRVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYAAFENPTSGAEGSW 234
           MRVLLYRDRSA+NKLQIAKITEEGVT+SQPYSLKT+W +++F NPT+GA GSW
Sbjct: 194 MRVLLYRDRSAINKLQIAKITEEGVTVSQPYSLKTYWEFSSFHNPTAGAAGSW 246

[Close]

BLAST of Sed0006534 vs. TAIR 10
Match: AT5G40580.1 (20S proteasome beta subunit PBB2 )

HSP 1 Score: 55.8 bits (133), Expect = 5.2e-08
Identity = 42/186 (22.58%), Postives = 88/186 (47.31%), Query Frame = 0


Query: 17  TGTSVVAIKYKDGILMAADLGGSYGSTLRYKSVERVKAIGKHSLLGASGEISDFQELLRN 76
           TGT++V + +KDG+++ AD   + G  +  K+ E++  +  +     +G  +D  E + +
Sbjct: 38  TGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAAD-TEAVTD 97

Query: 77  LDDLILFDNMWDDGNSLGPKEIHSYLTRVMYNRRNKFNPLWNSLVLGGVKNGQKYLGTVS 136
           +    L  + +  G         + L + +++ +   +    +LVLGGV     +L T+ 
Sbjct: 98  MVSSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQGHVSA---ALVLGGVDITGPHLHTIY 157

Query: 137 MIGVHFEDDHVTTGFGNHLARPILRDEWHENLTFEEGVKLLEKCMRVLLYRDRSAVNKLQ 196
             G        T G G+  A  +   ++ E LT +EG+KL+ + +   ++ D  + + + 
Sbjct: 158 PHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDLGSGSNVD 217

Query: 197 IAKITE 203
           I  IT+
Sbjct: 218 ICVITK 219

[Close]

BLAST of Sed0006534 vs. TAIR 10
Match: AT5G40580.2 (20S proteasome beta subunit PBB2 )

HSP 1 Score: 55.8 bits (133), Expect = 5.2e-08
Identity = 42/186 (22.58%), Postives = 88/186 (47.31%), Query Frame = 0


Query: 17  TGTSVVAIKYKDGILMAADLGGSYGSTLRYKSVERVKAIGKHSLLGASGEISDFQELLRN 76
           TGT++V + +KDG+++ AD   + G  +  K+ E++  +  +     +G  +D  E + +
Sbjct: 38  TGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAAD-TEAVTD 97

Query: 77  LDDLILFDNMWDDGNSLGPKEIHSYLTRVMYNRRNKFNPLWNSLVLGGVKNGQKYLGTVS 136
           +    L  + +  G         + L + +++ +   +    +LVLGGV     +L T+ 
Sbjct: 98  MVSSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQGHVSA---ALVLGGVDITGPHLHTIY 157

Query: 137 MIGVHFEDDHVTTGFGNHLARPILRDEWHENLTFEEGVKLLEKCMRVLLYRDRSAVNKLQ 196
             G        T G G+  A  +   ++ E LT +EG+KL+ + +   ++ D  + + + 
Sbjct: 158 PHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDLGSGSNVD 217

Query: 197 IAKITE 203
           I  IT+
Sbjct: 218 ICVITK 219

[Close]

BLAST of Sed0006534 vs. TAIR 10
Match: AT3G27430.1 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein )

HSP 1 Score: 55.1 bits (131), Expect = 8.9e-08
Identity = 42/186 (22.58%), Postives = 88/186 (47.31%), Query Frame = 0


Query: 17  TGTSVVAIKYKDGILMAADLGGSYGSTLRYKSVERVKAIGKHSLLGASGEISDFQELLRN 76
           TGT++V + +KDG+++ AD   + G  +  K+ E++  +  +     +G  +D  E + +
Sbjct: 38  TGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAAD-TEAVTD 97

Query: 77  LDDLILFDNMWDDGNSLGPKEIHSYLTRVMYNRRNKFNPLWNSLVLGGVKNGQKYLGTVS 136
           +    L  + +  G         + L + +++ +   +    +LVLGGV     +L T+ 
Sbjct: 98  MVSSQLRLHRYQTGRDSRVITALTLLKKHLFSYQGHVSA---ALVLGGVDITGPHLHTIY 157

Query: 137 MIGVHFEDDHVTTGFGNHLARPILRDEWHENLTFEEGVKLLEKCMRVLLYRDRSAVNKLQ 196
             G        T G G+  A  +   ++ E LT +EG+KL+ + +   ++ D  + + + 
Sbjct: 158 PHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIFNDLGSGSNVD 217

Query: 197 IAKITE 203
           I  IT+
Sbjct: 218 ICVITK 219

[Close]

BLAST of Sed0006534 vs. TAIR 10
Match: AT3G27430.2 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein )

HSP 1 Score: 55.1 bits (131), Expect = 8.9e-08
Identity = 42/186 (22.58%), Postives = 88/186 (47.31%), Query Frame = 0


Query: 17  TGTSVVAIKYKDGILMAADLGGSYGSTLRYKSVERVKAIGKHSLLGASGEISDFQELLRN 76
           TGT++V + +KDG+++ AD   + G  +  K+ E++  +  +     +G  +D  E + +
Sbjct: 38  TGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAAD-TEAVTD 97

Query: 77  LDDLILFDNMWDDGNSLGPKEIHSYLTRVMYNRRNKFNPLWNSLVLGGVKNGQKYLGTVS 136
           +    L  + +  G         + L + +++ +   +    +LVLGGV     +L T+ 
Sbjct: 98  MVSSQLRLHRYQTGRDSRVITALTLLKKHLFSYQGHVSA---ALVLGGVDITGPHLHTIY 157

Query: 137 MIGVHFEDDHVTTGFGNHLARPILRDEWHENLTFEEGVKLLEKCMRVLLYRDRSAVNKLQ 196
             G        T G G+  A  +   ++ E LT +EG+KL+ + +   ++ D  + + + 
Sbjct: 158 PHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIFNDLGSGSNVD 217

Query: 197 IAKITE 203
           I  IT+
Sbjct: 218 ICVITK 219

The following BLAST results are available for this feature:

BLAST of Sed0006534 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023512003.1	6.4e-125	93.31	proteasome subunit beta type-4-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023512002.1	8.4e-125	96.48	proteasome subunit beta type-4-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023007281.1	1.4e-124	92.89	proteasome subunit beta type-4-like isoform X2 [Cucurbita maxima]	[more]
XP_022948017.1	1.9e-124	92.89	proteasome subunit beta type-4-like isoform X2 [Cucurbita moschata]	[more]
XP_022944643.1	1.9e-124	92.89	proteasome subunit beta type-4-like isoform X2 [Cucurbita moschata]	[more]

BLAST of Sed0006534 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7DLR9	1.8e-114	82.83	Proteasome subunit beta type-4 OS=Arabidopsis thaliana OX=3702 GN=PBG1 PE=1 SV=2	[more]
Q3T108	5.6e-55	46.54	Proteasome subunit beta type-4 OS=Bos taurus OX=9913 GN=PSMB4 PE=1 SV=1	[more]
P34067	9.5e-55	45.95	Proteasome subunit beta type-4 OS=Rattus norvegicus OX=10116 GN=Psmb4 PE=1 SV=2	[more]
P28070	2.1e-54	46.30	Proteasome subunit beta type-4 OS=Homo sapiens OX=9606 GN=PSMB4 PE=1 SV=4	[more]
P99026	2.8e-54	46.30	Proteasome subunit beta type-4 OS=Mus musculus OX=10090 GN=Psmb4 PE=1 SV=1	[more]

BLAST of Sed0006534 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L038	6.9e-125	92.89	Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111499823 PE=3 SV=1	[more]
A0A6J1FY93	9.0e-125	92.89	Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111449042 PE=3 SV=1	[more]
A0A6J1G813	9.0e-125	92.89	Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111451719 PE=3 SV=1	[more]
A0A6J1L2I8	1.2e-124	96.04	Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111499823 PE=3 SV=1	[more]
A0A6J1G834	1.2e-124	96.04	Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111451719 PE=3 SV=1	[more]

BLAST of Sed0006534 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G56450.1	1.3e-115	82.83	20S proteasome beta subunit G1	[more]
AT5G40580.1	5.2e-08	22.58	20S proteasome beta subunit PBB2	[more]
AT5G40580.2	5.2e-08	22.58	20S proteasome beta subunit PBB2	[more]
AT3G27430.1	8.9e-08	22.58	N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein	[more]
AT3G27430.2	8.9e-08	22.58	N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016295	Proteasome subunit beta 4	PIRSF	PIRSF001213	MCP	coord: 1..209 e-value: 8.2E-87 score: 288.5
IPR016295	Proteasome subunit beta 4	CDD	cd03760	proteasome_beta_type_4	coord: 17..196 e-value: 4.49516E-106 score: 302.567
IPR029055	Nucleophile aminohydrolases, N-terminal	GENE3D	3.60.20.10	Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1	coord: 15..211 e-value: 1.2E-51 score: 177.1
IPR029055	Nucleophile aminohydrolases, N-terminal	SUPERFAMILY	56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	coord: 12..196
IPR001353	Proteasome, subunit alpha/beta	PFAM	PF00227	Proteasome	coord: 17..196 e-value: 3.6E-30 score: 104.9
None	No IPR available	PANTHER	PTHR11599	PROTEASOME SUBUNIT ALPHA/BETA	coord: 5..199
None	No IPR available	PANTHER	PTHR11599:SF177	PROTEASOME SUBUNIT BETA	coord: 5..199
IPR016050	Proteasome beta-type subunit, conserved site	PROSITE	PS00854	PROTEASOME_BETA_1	coord: 22..69
IPR023333	Proteasome B-type subunit	PROSITE	PS51476	PROTEASOME_BETA_2	coord: 18..200 score: 36.016319

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006534.1	Sed0006534.1	mRNA
Sed0006534.2	Sed0006534.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010498	proteasomal protein catabolic process
biological_process	GO:0051603	proteolysis involved in cellular protein catabolic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0019774	proteasome core complex, beta-subunit complex
cellular_component	GO:0005839	proteasome core complex
molecular_function	GO:0004298	threonine-type endopeptidase activity