Sed0006081 (gene) Chayote v1

Overview


Name	Sed0006081
Type	gene
Organism	Sechium edule (Chayote v1)
Description	VID27-like protein
Location	LG14: 22750444 .. 22751854 (-)
RNA-Seq Expression	Sed0006081
Synteny	Sed0006081

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAATATATGGAGATGAAGGAAAGGGAAGGGTACATCCGTAATTGCACACTACAAGTGTATAACAGAAGTGTACGACAGATCGCGAATTCAATTCACATTCCCTGCATTGACGAAACGACAAATCGACTCTCCATTTCCATCTTCTTCTCTGCAAATTTTCAAACTCCAACCATTTCCATGGCGGATTTCAATTAACCACTCATTTTTCTCCACCAACATATCTCACAGTCATGTCTGTTTCTTCTTCTTCTTCTTCGAATAAACCCACATTTTCCATTTCCTCCGATCCTCTGTTTTCAACTCTCCTCTCTTTCTCCGCCCTCATTCTCCTCAACTTCCCTCCCCTTCTATGGCGAATCCTCCTCTCTCCGGCCGTCCTCCTCACCGGATTCCTCTTCCTCTCGCTCCTCCGCCTCGGTGCCACTCAGAAATCAACCCAACGCCAAACGAGAAATCGCAACAATCGGTCTCAATTCGCCGTCGAATCGGAGAGTTCCGCCGCCGTATCGTGCCTCGGTGAAACTCAGGGATCAATCCTACGCCAAATTCAAAATCGGAAAAATCGATCTCAAATCGCCGTCCAAATCGATTCCAAACAACCGGAGATCAGTTCCGCCGCCGTATCGGCGGCCGTAAGCAGATCGGAAGTTGCAGACTCGTGCGCTTGCCTCGATGCAACTCCGAGATCAATGTTACGCCAAATTAAGAATCGCGCGAATCGATCTCAAATCGTCGTCGAAATCGATTCTAAACAATCGGAGAGTTCCGCCGCCGTATCGGAAGCCATAACCGAAGCATCGGAAGTTGCAATTTCACTCAGTGCAAAACAGAGATCAATCCAACGCCAAGCCGTTGAAATCGATTCCAAACAATCGGAGATCAGTTCCGCCGCCGCATCGGAAGCCGTTAGCGACGGATCGGACGGCGGCGCGTGCTTCGATGATAAATCATTCATGCAGTGGAATGTTAGGGCACCGTTGGAGGTAATTCACGAAGAGTACGAAAACGAGAGCGATGAACCGGAGCCCCGACTGGAACGGGTCGAACTGGACCGGTACCCGTCGCTGGCGATGTACTACCCGGAAACGGACTCCGATGGCTCGTCGGACGGAGGTTGGCCGGAGTCCATGGATGAAAATATGTGTTTCATGTGGGATGAGGATGAAGACAGGGATGAAATGATTGAGATTTCGTTGGAAACCATGAACAAGAATATATCGGAATTTCAGTTGGAGCTTGAGGATAGTTTGATTGAGATTGATATTTCTCCGACGAGGAACGCCGGTGAGTTTGCCGATGAGTGTTGATGAGGTTTCGGTTCAGTTAAAGTGCGTTAATCGAGGATTAATTGCATAATTATGTGTGTTTGGAGTTTTGTAGAAAGGAAAAAAATAATATATATAGAGAG

mRNA sequence

AAAAAATATATGGAGATGAAGGAAAGGGAAGGGTACATCCGTAATTGCACACTACAAGTGTATAACAGAAGTGTACGACAGATCGCGAATTCAATTCACATTCCCTGCATTGACGAAACGACAAATCGACTCTCCATTTCCATCTTCTTCTCTGCAAATTTTCAAACTCCAACCATTTCCATGGCGGATTTCAATTAACCACTCATTTTTCTCCACCAACATATCTCACAGTCATGTCTGTTTCTTCTTCTTCTTCTTCGAATAAACCCACATTTTCCATTTCCTCCGATCCTCTGTTTTCAACTCTCCTCTCTTTCTCCGCCCTCATTCTCCTCAACTTCCCTCCCCTTCTATGGCGAATCCTCCTCTCTCCGGCCGTCCTCCTCACCGGATTCCTCTTCCTCTCGCTCCTCCGCCTCGGTGCCACTCAGAAATCAACCCAACGCCAAACGAGAAATCGCAACAATCGGTCTCAATTCGCCGTCGAATCGGAGAGTTCCGCCGCCGTATCGTGCCTCGGTGAAACTCAGGGATCAATCCTACGCCAAATTCAAAATCGGAAAAATCGATCTCAAATCGCCGTCCAAATCGATTCCAAACAACCGGAGATCAGTTCCGCCGCCGTATCGGCGGCCGTAAGCAGATCGGAAGTTGCAGACTCGTGCGCTTGCCTCGATGCAACTCCGAGATCAATGTTACGCCAAATTAAGAATCGCGCGAATCGATCTCAAATCGTCGTCGAAATCGATTCTAAACAATCGGAGAGTTCCGCCGCCGTATCGGAAGCCATAACCGAAGCATCGGAAGTTGCAATTTCACTCAGTGCAAAACAGAGATCAATCCAACGCCAAGCCGTTGAAATCGATTCCAAACAATCGGAGATCAGTTCCGCCGCCGCATCGGAAGCCGTTAGCGACGGATCGGACGGCGGCGCGTGCTTCGATGATAAATCATTCATGCAGTGGAATGTTAGGGCACCGTTGGAGGTAATTCACGAAGAGTACGAAAACGAGAGCGATGAACCGGAGCCCCGACTGGAACGGGTCGAACTGGACCGGTACCCGTCGCTGGCGATGTACTACCCGGAAACGGACTCCGATGGCTCGTCGGACGGAGGTTGGCCGGAGTCCATGGATGAAAATATGTGTTTCATGTGGGATGAGGATGAAGACAGGGATGAAATGATTGAGATTTCGTTGGAAACCATGAACAAGAATATATCGGAATTTCAGTTGGAGCTTGAGGATAGTTTGATTGAGATTGATATTTCTCCGACGAGGAACGCCGGTGAGTTTGCCGATGAGTGTTGATGAGGTTTCGGTTCAGTTAAAGTGCGTTAATCGAGGATTAATTGCATAATTATGTGTGTTTGGAGTTTTGTAGAAAGGAAAAAAATAATATATATAGAGAG

Coding sequence (CDS)

ATGTCTGTTTCTTCTTCTTCTTCTTCGAATAAACCCACATTTTCCATTTCCTCCGATCCTCTGTTTTCAACTCTCCTCTCTTTCTCCGCCCTCATTCTCCTCAACTTCCCTCCCCTTCTATGGCGAATCCTCCTCTCTCCGGCCGTCCTCCTCACCGGATTCCTCTTCCTCTCGCTCCTCCGCCTCGGTGCCACTCAGAAATCAACCCAACGCCAAACGAGAAATCGCAACAATCGGTCTCAATTCGCCGTCGAATCGGAGAGTTCCGCCGCCGTATCGTGCCTCGGTGAAACTCAGGGATCAATCCTACGCCAAATTCAAAATCGGAAAAATCGATCTCAAATCGCCGTCCAAATCGATTCCAAACAACCGGAGATCAGTTCCGCCGCCGTATCGGCGGCCGTAAGCAGATCGGAAGTTGCAGACTCGTGCGCTTGCCTCGATGCAACTCCGAGATCAATGTTACGCCAAATTAAGAATCGCGCGAATCGATCTCAAATCGTCGTCGAAATCGATTCTAAACAATCGGAGAGTTCCGCCGCCGTATCGGAAGCCATAACCGAAGCATCGGAAGTTGCAATTTCACTCAGTGCAAAACAGAGATCAATCCAACGCCAAGCCGTTGAAATCGATTCCAAACAATCGGAGATCAGTTCCGCCGCCGCATCGGAAGCCGTTAGCGACGGATCGGACGGCGGCGCGTGCTTCGATGATAAATCATTCATGCAGTGGAATGTTAGGGCACCGTTGGAGGTAATTCACGAAGAGTACGAAAACGAGAGCGATGAACCGGAGCCCCGACTGGAACGGGTCGAACTGGACCGGTACCCGTCGCTGGCGATGTACTACCCGGAAACGGACTCCGATGGCTCGTCGGACGGAGGTTGGCCGGAGTCCATGGATGAAAATATGTGTTTCATGTGGGATGAGGATGAAGACAGGGATGAAATGATTGAGATTTCGTTGGAAACCATGAACAAGAATATATCGGAATTTCAGTTGGAGCTTGAGGATAGTTTGATTGAGATTGATATTTCTCCGACGAGGAACGCCGGTGAGTTTGCCGATGAGTGTTGA

Protein sequence

MSVSSSSSSNKPTFSISSDPLFSTLLSFSALILLNFPPLLWRILLSPAVLLTGFLFLSLLRLGATQKSTQRQTRNRNNRSQFAVESESSAAVSCLGETQGSILRQIQNRKNRSQIAVQIDSKQPEISSAAVSAAVSRSEVADSCACLDATPRSMLRQIKNRANRSQIVVEIDSKQSESSAAVSEAITEASEVAISLSAKQRSIQRQAVEIDSKQSEISSAAASEAVSDGSDGGACFDDKSFMQWNVRAPLEVIHEEYENESDEPEPRLERVELDRYPSLAMYYPETDSDGSSDGGWPESMDENMCFMWDEDEDRDEMIEISLETMNKNISEFQLELEDSLIEIDISPTRNAGEFADEC

Homology

[Close]

BLAST of Sed0006081 vs. NCBI nr
Match: XP_022926379.1 (uncharacterized protein LOC111433544 [Cucurbita moschata] >XP_022926380.1 uncharacterized protein LOC111433544 [Cucurbita moschata])

HSP 1 Score: 205.3 bits (521), Expect = 8.8e-49
Identity = 164/374 (43.85%), Postives = 192/374 (51.34%), Query Frame = 0


Query: 2   SVSSSSSSNKPTFSIS--SDPLFSTLLSFSALILLNFPPLLWRILLSPAVLLTGFLFLSL 61
           S SS SSSN PT SIS  SDPLFSTLLSF AL LL FP LLWRIL SP  LLTGFL LSL
Sbjct: 15  SSSSPSSSNTPTVSISITSDPLFSTLLSFFALTLLYFPRLLWRILFSPIFLLTGFLLLSL 74

Query: 62  LRLGATQKSTQRQTRNRNNRSQFAVESESSAAVSCLGETQGSILRQIQNRKNRSQIAVQI 121
           LRLGATQ+S  RQT + NN+ +    +ES AAV                           
Sbjct: 75  LRLGATQRSFLRQTSDNNNQIECEESAESVAAV--------------------------- 134

Query: 122 DSKQPEISSAAVSAAVSRSEVADSCACLDATPRSMLRQIKNRANRSQIVVEIDSKQSESS 181
                                                                  QSESS
Sbjct: 135 -------------------------------------------------------QSESS 194

Query: 182 AAVSEAITEASEVAISLSAKQRSIQRQAVEIDSKQSEISSAAASEAVSDGSDGGACFDDK 241
            AVSEA++  S+ A S+S                                    ACF++ 
Sbjct: 195 TAVSEAVSGGSKCADSVSC-----------------------------------ACFEE- 254

Query: 242 SFMQWNVRAPLEVIHEEYE---------NESDEPEPRLERVELDRYPSLAMYYPETDSDG 301
           SF+QWNVRAPLEVI+EEYE         NESD PEPR  R+ L+RYPSL++YYPETDSD 
Sbjct: 255 SFVQWNVRAPLEVIYEEYEGEDHDKEASNESD-PEPRQVRIGLERYPSLSLYYPETDSDS 268

Query: 302 SSDGGWP-----ESMDENMCFMWDEDEDRDEMIEISLETMNKNISEFQLELEDSL--IEI 358
           SS+  +P     +S+D+N+C MWDEDEDRDE+IEI+L+  NK  SEF LE ED+L  IEI
Sbjct: 315 SSEDNFPRTGDWDSLDDNLCLMWDEDEDRDELIEIALDKTNKKASEFLLE-EDNLIEIEI 268

[Close]

BLAST of Sed0006081 vs. NCBI nr
Match: KAG7026597.1 (hypothetical protein SDJN02_10599, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 204.9 bits (520), Expect = 1.2e-48
Identity = 163/374 (43.58%), Postives = 192/374 (51.34%), Query Frame = 0


Query: 2   SVSSSSSSNKPTFSIS--SDPLFSTLLSFSALILLNFPPLLWRILLSPAVLLTGFLFLSL 61
           S SSSSSSN PT SIS  SDPLFSTLLSF AL LL FP LLWRIL SP  LLTGFL LSL
Sbjct: 5   SSSSSSSSNTPTVSISITSDPLFSTLLSFFALTLLYFPRLLWRILFSPIFLLTGFLLLSL 64

Query: 62  LRLGATQKSTQRQTRNRNNRSQFAVESESSAAVSCLGETQGSILRQIQNRKNRSQIAVQI 121
           LRLGATQ+S  RQ  + NN+ +    +E+ AAV                           
Sbjct: 65  LRLGATQRSFLRQINDNNNQIECEESAENDAAV--------------------------- 124

Query: 122 DSKQPEISSAAVSAAVSRSEVADSCACLDATPRSMLRQIKNRANRSQIVVEIDSKQSESS 181
                                                                  QSESS
Sbjct: 125 -------------------------------------------------------QSESS 184

Query: 182 AAVSEAITEASEVAISLSAKQRSIQRQAVEIDSKQSEISSAAASEAVSDGSDGGACFDDK 241
            AVSEA++  S+ A S+S                                    ACF++ 
Sbjct: 185 TAVSEAVSGGSKCADSVSC-----------------------------------ACFEE- 244

Query: 242 SFMQWNVRAPLEVIHEEYE---------NESDEPEPRLERVELDRYPSLAMYYPETDSDG 301
           SF+QWNVRAPLEVI+EEYE         NESD PEPR  R+ L+RYPSL++YYPETDSD 
Sbjct: 245 SFVQWNVRAPLEVIYEEYEGEDHDKEASNESD-PEPRQVRIGLERYPSLSLYYPETDSDS 258

Query: 302 SSDGGWP-----ESMDENMCFMWDEDEDRDEMIEISLETMNKNISEFQLELEDSL--IEI 358
           SS+  +P     +S+D+N+C MWDEDEDRDE+IEI+L+  NK  SEF LE ED+L  IEI
Sbjct: 305 SSEDNFPRTGDWDSLDDNLCLMWDEDEDRDELIEIALDKTNKKASEFLLE-EDNLIEIEI 258

[Close]

BLAST of Sed0006081 vs. NCBI nr
Match: KAG6594629.1 (hypothetical protein SDJN03_11182, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 204.5 bits (519), Expect = 1.5e-48
Identity = 162/372 (43.55%), Postives = 191/372 (51.34%), Query Frame = 0


Query: 4   SSSSSSNKPTFSIS--SDPLFSTLLSFSALILLNFPPLLWRILLSPAVLLTGFLFLSLLR 63
           SSSSSSN PT SIS  SDPLFSTLLSF AL LL FP LLWRIL SP  LLTGFL LSLLR
Sbjct: 3   SSSSSSNTPTVSISITSDPLFSTLLSFFALTLLYFPRLLWRILFSPIFLLTGFLLLSLLR 62

Query: 64  LGATQKSTQRQTRNRNNRSQFAVESESSAAVSCLGETQGSILRQIQNRKNRSQIAVQIDS 123
           LGATQ+S  RQ  + NN+ +    +E+ AAV                             
Sbjct: 63  LGATQRSFLRQINDNNNQIECEESAENDAAV----------------------------- 122

Query: 124 KQPEISSAAVSAAVSRSEVADSCACLDATPRSMLRQIKNRANRSQIVVEIDSKQSESSAA 183
                                                                QSESS A
Sbjct: 123 -----------------------------------------------------QSESSTA 182

Query: 184 VSEAITEASEVAISLSAKQRSIQRQAVEIDSKQSEISSAAASEAVSDGSDGGACFDDKSF 243
           VSEA++  S+ A S+S                                    ACF++ SF
Sbjct: 183 VSEAVSGGSKCADSVSC-----------------------------------ACFEE-SF 242

Query: 244 MQWNVRAPLEVIHEEYE---------NESDEPEPRLERVELDRYPSLAMYYPETDSDGSS 303
           +QWNVRAPLEVI+EEYE         NESD PEPR  R+ L+RYPSL++YYPETDSD SS
Sbjct: 243 VQWNVRAPLEVIYEEYEGEDHDKEASNESD-PEPRQVRIGLERYPSLSLYYPETDSDSSS 254

Query: 304 DGGWP-----ESMDENMCFMWDEDEDRDEMIEISLETMNKNISEFQLELEDSL--IEIDI 358
           +  +P     +S+D+N+C MWDEDEDRDE+IEI+L+  NK  SEF LE ED+L  IEIDI
Sbjct: 303 EDNFPRTGDWDSLDDNLCLMWDEDEDRDELIEIALDKTNKKASEFLLE-EDNLIEIEIDI 254

[Close]

BLAST of Sed0006081 vs. NCBI nr
Match: XP_023518306.1 (uncharacterized protein LOC111781826 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 202.6 bits (514), Expect = 5.7e-48
Identity = 161/374 (43.05%), Postives = 191/374 (51.07%), Query Frame = 0


Query: 2   SVSSSSSSNKPTFSIS--SDPLFSTLLSFSALILLNFPPLLWRILLSPAVLLTGFLFLSL 61
           S S SSSSN PT SIS  SDPLFSTLLSF AL LL FP LLWRIL SP  LLTGFL LSL
Sbjct: 28  SSSPSSSSNTPTVSISLTSDPLFSTLLSFFALTLLYFPRLLWRILFSPIFLLTGFLLLSL 87

Query: 62  LRLGATQKSTQRQTRNRNNRSQFAVESESSAAVSCLGETQGSILRQIQNRKNRSQIAVQI 121
           LRLGATQ+S  RQT + N + ++   +E  AAV                           
Sbjct: 88  LRLGATQRSFLRQTNDNNYQIEYEESAEKDAAV--------------------------- 147

Query: 122 DSKQPEISSAAVSAAVSRSEVADSCACLDATPRSMLRQIKNRANRSQIVVEIDSKQSESS 181
                                                                  QSESS
Sbjct: 148 -------------------------------------------------------QSESS 207

Query: 182 AAVSEAITEASEVAISLSAKQRSIQRQAVEIDSKQSEISSAAASEAVSDGSDGGACFDDK 241
            AVSE+++  S+ A S+S                                    ACF++ 
Sbjct: 208 TAVSESVSGGSKCADSVSC-----------------------------------ACFEE- 267

Query: 242 SFMQWNVRAPLEVIHEEYE---------NESDEPEPRLERVELDRYPSLAMYYPETDSDG 301
           SF+QWNVRAPLEVI+EEYE         NESD PEPR  R+ L+RYPSL++YYPETDSD 
Sbjct: 268 SFVQWNVRAPLEVIYEEYEGEDHDKEASNESD-PEPRQVRIGLERYPSLSLYYPETDSDS 281

Query: 302 SSDGGWP-----ESMDENMCFMWDEDEDRDEMIEISLETMNKNISEFQLELEDSL--IEI 358
           SS+  +P     +S+D+N+C MWDEDEDRDE+IEI+L+  NK  SEF LE ED+L  IEI
Sbjct: 328 SSEDNFPTTGDWDSLDDNLCLMWDEDEDRDELIEIALDKTNKKASEFLLE-EDNLIEIEI 281

[Close]

BLAST of Sed0006081 vs. NCBI nr
Match: XP_023003982.1 (uncharacterized protein LOC111497433 [Cucurbita maxima] >XP_023003983.1 uncharacterized protein LOC111497433 [Cucurbita maxima])

HSP 1 Score: 199.9 bits (507), Expect = 3.7e-47
Identity = 160/374 (42.78%), Postives = 191/374 (51.07%), Query Frame = 0


Query: 2   SVSSSSSSNKPTFSIS--SDPLFSTLLSFSALILLNFPPLLWRILLSPAVLLTGFLFLSL 61
           S SSSSSSN PT SIS  SDPL STLLSF AL LL FP LLWRIL SP  LLTGFL LSL
Sbjct: 15  SSSSSSSSNTPTVSISITSDPLLSTLLSFFALTLLYFPRLLWRILFSPIFLLTGFLLLSL 74

Query: 62  LRLGATQKSTQRQTRNRNNRSQFAVESESSAAVSCLGETQGSILRQIQNRKNRSQIAVQI 121
           LRLGATQ+S  RQT + NN+ +    +E+ AAV                           
Sbjct: 75  LRLGATQRSFLRQTNDNNNQIECEESAENDAAV--------------------------- 134

Query: 122 DSKQPEISSAAVSAAVSRSEVADSCACLDATPRSMLRQIKNRANRSQIVVEIDSKQSESS 181
                                                                  QSESS
Sbjct: 135 -------------------------------------------------------QSESS 194

Query: 182 AAVSEAITEASEVAISLSAKQRSIQRQAVEIDSKQSEISSAAASEAVSDGSDGGACFDDK 241
            AVSE+++  S+ A S+S K                                   CF++ 
Sbjct: 195 TAVSESVSGGSKCADSVSCK-----------------------------------CFEE- 254

Query: 242 SFMQWNVRAPLEVIHEEYE---------NESDEPEPRLERVELDRYPSLAMYYPETDSDG 301
           SF+QWNVRAPLEVI+EEYE         NESD PEPR  R+ L+RYPSL++YYPETDSD 
Sbjct: 255 SFVQWNVRAPLEVIYEEYEGEDHDKEASNESD-PEPRQVRIGLERYPSLSLYYPETDSDS 268

Query: 302 SSDGGWP-----ESMDENMCFMWDEDEDRDEMIEISLETMNKNISEFQLELEDSL--IEI 358
           SS+  +P     +S+D+++C MWDEDEDRDE+IEI+L+  NK  SEF LE ED+L  IEI
Sbjct: 315 SSEDNFPTTGDWDSLDDHLCLMWDEDEDRDELIEIALDKTNKKASEFLLE-EDNLIEIEI 268

[Close]

BLAST of Sed0006081 vs. ExPASy TrEMBL
Match: A0A6J1EEY1 (uncharacterized protein LOC111433544 OS=Cucurbita moschata OX=3662 GN=LOC111433544 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 4.3e-49
Identity = 164/374 (43.85%), Postives = 192/374 (51.34%), Query Frame = 0


Query: 2   SVSSSSSSNKPTFSIS--SDPLFSTLLSFSALILLNFPPLLWRILLSPAVLLTGFLFLSL 61
           S SS SSSN PT SIS  SDPLFSTLLSF AL LL FP LLWRIL SP  LLTGFL LSL
Sbjct: 15  SSSSPSSSNTPTVSISITSDPLFSTLLSFFALTLLYFPRLLWRILFSPIFLLTGFLLLSL 74

Query: 62  LRLGATQKSTQRQTRNRNNRSQFAVESESSAAVSCLGETQGSILRQIQNRKNRSQIAVQI 121
           LRLGATQ+S  RQT + NN+ +    +ES AAV                           
Sbjct: 75  LRLGATQRSFLRQTSDNNNQIECEESAESVAAV--------------------------- 134

Query: 122 DSKQPEISSAAVSAAVSRSEVADSCACLDATPRSMLRQIKNRANRSQIVVEIDSKQSESS 181
                                                                  QSESS
Sbjct: 135 -------------------------------------------------------QSESS 194

Query: 182 AAVSEAITEASEVAISLSAKQRSIQRQAVEIDSKQSEISSAAASEAVSDGSDGGACFDDK 241
            AVSEA++  S+ A S+S                                    ACF++ 
Sbjct: 195 TAVSEAVSGGSKCADSVSC-----------------------------------ACFEE- 254

Query: 242 SFMQWNVRAPLEVIHEEYE---------NESDEPEPRLERVELDRYPSLAMYYPETDSDG 301
           SF+QWNVRAPLEVI+EEYE         NESD PEPR  R+ L+RYPSL++YYPETDSD 
Sbjct: 255 SFVQWNVRAPLEVIYEEYEGEDHDKEASNESD-PEPRQVRIGLERYPSLSLYYPETDSDS 268

Query: 302 SSDGGWP-----ESMDENMCFMWDEDEDRDEMIEISLETMNKNISEFQLELEDSL--IEI 358
           SS+  +P     +S+D+N+C MWDEDEDRDE+IEI+L+  NK  SEF LE ED+L  IEI
Sbjct: 315 SSEDNFPRTGDWDSLDDNLCLMWDEDEDRDELIEIALDKTNKKASEFLLE-EDNLIEIEI 268

[Close]

BLAST of Sed0006081 vs. ExPASy TrEMBL
Match: A0A6J1KY66 (uncharacterized protein LOC111497433 OS=Cucurbita maxima OX=3661 GN=LOC111497433 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.8e-47
Identity = 160/374 (42.78%), Postives = 191/374 (51.07%), Query Frame = 0


Query: 2   SVSSSSSSNKPTFSIS--SDPLFSTLLSFSALILLNFPPLLWRILLSPAVLLTGFLFLSL 61
           S SSSSSSN PT SIS  SDPL STLLSF AL LL FP LLWRIL SP  LLTGFL LSL
Sbjct: 15  SSSSSSSSNTPTVSISITSDPLLSTLLSFFALTLLYFPRLLWRILFSPIFLLTGFLLLSL 74

Query: 62  LRLGATQKSTQRQTRNRNNRSQFAVESESSAAVSCLGETQGSILRQIQNRKNRSQIAVQI 121
           LRLGATQ+S  RQT + NN+ +    +E+ AAV                           
Sbjct: 75  LRLGATQRSFLRQTNDNNNQIECEESAENDAAV--------------------------- 134

Query: 122 DSKQPEISSAAVSAAVSRSEVADSCACLDATPRSMLRQIKNRANRSQIVVEIDSKQSESS 181
                                                                  QSESS
Sbjct: 135 -------------------------------------------------------QSESS 194

Query: 182 AAVSEAITEASEVAISLSAKQRSIQRQAVEIDSKQSEISSAAASEAVSDGSDGGACFDDK 241
            AVSE+++  S+ A S+S K                                   CF++ 
Sbjct: 195 TAVSESVSGGSKCADSVSCK-----------------------------------CFEE- 254

Query: 242 SFMQWNVRAPLEVIHEEYE---------NESDEPEPRLERVELDRYPSLAMYYPETDSDG 301
           SF+QWNVRAPLEVI+EEYE         NESD PEPR  R+ L+RYPSL++YYPETDSD 
Sbjct: 255 SFVQWNVRAPLEVIYEEYEGEDHDKEASNESD-PEPRQVRIGLERYPSLSLYYPETDSDS 268

Query: 302 SSDGGWP-----ESMDENMCFMWDEDEDRDEMIEISLETMNKNISEFQLELEDSL--IEI 358
           SS+  +P     +S+D+++C MWDEDEDRDE+IEI+L+  NK  SEF LE ED+L  IEI
Sbjct: 315 SSEDNFPTTGDWDSLDDHLCLMWDEDEDRDELIEIALDKTNKKASEFLLE-EDNLIEIEI 268

[Close]

BLAST of Sed0006081 vs. ExPASy TrEMBL
Match: A0A6J1CME6 (uncharacterized protein LOC111012458 OS=Momordica charantia OX=3673 GN=LOC111012458 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.6e-30
Identity = 133/369 (36.04%), Postives = 171/369 (46.34%), Query Frame = 0


Query: 9   SNKPTFSISSDPLFSTLLSFSALILLNFPPLLWRILLSPAVLLTGFLFLSLLRLGATQKS 68
           S K T S  SDPLFSTLL+F ALILL+FP + W +L SP  LLTG L LSLLRLGATQ+ 
Sbjct: 3   SCKRTISCFSDPLFSTLLTFFALILLSFPRIFWPLLFSPVPLLTGLLLLSLLRLGATQR- 62

Query: 69  TQRQTRNRNNRSQFAVESESSAAVSCLGETQGSILRQIQNRKNRSQIAVQIDSKQPEISS 128
             R  +++N      +ESE       +G    +++   +  + R                
Sbjct: 63  FPRHIKDKNQ-----IESE-------IGSRAAAVVPPEEEDRGR--------------DD 122

Query: 129 AAVSAAVSRSEVADSCACLDATPRSMLRQIKNRANRSQIVVEIDSKQSESSAAVSEAITE 188
           A VS       + D  +C                                          
Sbjct: 123 AVVSKLGGGGGICDIVSC------------------------------------------ 182

Query: 189 ASEVAISLSAKQRSIQRQAVEIDSKQSEISSAAASEAVSDGSDGGACFDDKSFMQWNVRA 248
                                                        ACF++ SF+QWNVRA
Sbjct: 183 ---------------------------------------------ACFEE-SFVQWNVRA 242

Query: 249 PLEVIHEEYENESD-----------EPEPRLERVELDRYPSLAMYYPETDSDGSSDGGWP 308
           PLEVI+EEYE E D           E EPR   V ++RYPSL++YYPETDSD SSD  +P
Sbjct: 243 PLEVIYEEYEGEDDKDVSNESDPFTETEPRPVPVRIERYPSLSLYYPETDSDSSSDDEFP 253

Query: 309 -----ESMDENMCFMWDEDEDRDEMIEISLE-TMNK---NISEFQLELEDSLIEIDISPT 358
                +S+D ++CFMWD+ EDRDE+IEI+L+ T NK   +   FQLE E++LIEIDISPT
Sbjct: 303 IPGAWDSLD-SLCFMWDDGEDRDELIEIALDKTTNKMKASSELFQLE-EENLIEIDISPT 253

[Close]

BLAST of Sed0006081 vs. ExPASy TrEMBL
Match: A0A6J5UL55 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS24942 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.3e-25
Identity = 123/353 (34.84%), Postives = 172/353 (48.73%), Query Frame = 0


Query: 15  SISSDPLFSTLLSFSALILLNFPPLLWRILLSPAVLLTGFLFLSLLRLGATQKSTQRQTR 74
           S+SS PLFS++++  ALILL FP    RI+ SP  ++TG L L++LRLGA Q+    + R
Sbjct: 30  SVSSSPLFSSIVTLYALILLYFPYHFIRIVFSPVPIITGILLLTILRLGAVQRFEGDEHR 89

Query: 75  NRNNRSQFAVESESSAAVSCLGETQGSILRQIQNRKNRSQIAVQIDSKQPEISSAAVSAA 134
            + +              SCL ET+                                   
Sbjct: 90  EKEDN-------------SCLLETE----------------------------------- 149

Query: 135 VSRSEVADSCACLDATPRSMLRQIKNRANRSQIVVEIDSKQSESSAAVSEAITEASE-VA 194
                      C              + N S+   E ++K++  S + S   TE  E + 
Sbjct: 150 -----------C-------------TKTNESKECNE-ENKENRGSTSTSTQRTEVQEQIP 209

Query: 195 ISLSAKQRSIQRQAVEIDSKQSEISSAAASEAVSDGSDGGACFDDKSFMQWNVRAPLEVI 254
            S  A+  S      E DS +SE+           G D   CF+D  F++WN++APLEVI
Sbjct: 210 TSPEAQYHSFFTYQSETDS-ESEM-----------GFDPNPCFED-FFVEWNLKAPLEVI 269

Query: 255 HEEYENESDE-------PEPRLERVE----LDRYPSLAMYYPETDSDGSSDGGWPE---- 314
           +EE E E DE       P  + E+      L+RYPSL+MYYPE+DSD SSDGG+      
Sbjct: 270 YEENEGEEDEMDRNGNDPNSKQEQESQVQGLERYPSLSMYYPESDSDSSSDGGYSVTGVC 295

Query: 315 SMDENMCFMWDEDEDRDEMIEISLETMNKNISEFQLE-LEDSLIEIDISPTRN 351
           +  E+MCF W E+EDR+ +IEI+LE  +K   +FQ++  ED+LIEIDISPTRN
Sbjct: 330 NSPESMCFRW-EEEDREGLIEIALEENSKRGMDFQVDHEEDNLIEIDISPTRN 295

[Close]

BLAST of Sed0006081 vs. ExPASy TrEMBL
Match: A0A251PF99 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G037000 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 9.6e-25
Identity = 121/353 (34.28%), Postives = 170/353 (48.16%), Query Frame = 0


Query: 15  SISSDPLFSTLLSFSALILLNFPPLLWRILLSPAVLLTGFLFLSLLRLGATQKSTQRQTR 74
           S++S PLFS++++  ALILL FP    RI+ SP  ++TG L L++LRLGA Q+    + R
Sbjct: 30  SVTSSPLFSSIVTLYALILLYFPYHFIRIVFSPVPIITGILLLTILRLGAVQRFEGDEHR 89

Query: 75  NRNNRSQFAVESESSAAVSCLGETQGSILRQIQNRKNRSQIAVQIDSKQPEISSAAVSAA 134
            + +              SCL ET+                                   
Sbjct: 90  EKEDN-------------SCLLETE----------------------------------- 149

Query: 135 VSRSEVADSCACLDATPRSMLRQIKNRANRSQIVVEIDSKQSESSAAVSEAITEASE-VA 194
                      C              + N S+   E ++K++  S + S   TE  E + 
Sbjct: 150 -----------C-------------TKTNESKECNE-ENKENRGSTSTSIQRTEVQEQIP 209

Query: 195 ISLSAKQRSIQRQAVEIDSKQSEISSAAASEAVSDGSDGGACFDDKSFMQWNVRAPLEVI 254
            S  A+  S      E DS +SE+           G D   CF+D  F++WN++APLEVI
Sbjct: 210 TSPEAQDHSFFTYQSETDS-ESEM-----------GFDPNPCFED-FFVEWNLKAPLEVI 269

Query: 255 HEEYENESDE-----------PEPRLERVELDRYPSLAMYYPETDSDGSSDGGWPES--- 314
           +EE E E DE           PE   +   L+RYPSL+MYYPE+DSD SSDGG+  +   
Sbjct: 270 YEENEGEEDEMDRNGNDPNSKPEQESQVQGLERYPSLSMYYPESDSDSSSDGGYSVTGVW 295

Query: 315 -MDENMCFMWDEDEDRDEMIEISLETMNKNISEFQLE-LEDSLIEIDISPTRN 351
              E MCF W E+EDR+ +IEI+LE  +K   +FQ++  E++LIEIDISPTRN
Sbjct: 330 DSPETMCFRW-EEEDREGLIEIALEENSKRGMDFQVDHEEENLIEIDISPTRN 295

[Close]

BLAST of Sed0006081 vs. TAIR 10
Match: AT4G21500.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G05018.1); Has 20 Blast hits to 20 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 79.7 bits (195), Expect = 5.2e-15
Identity = 57/128 (44.53%), Postives = 79/128 (61.72%), Query Frame = 0


Query: 241 FMQWNVRAPLEVIHEEYENESDEPE---PRLERVELDRYPSLAMYYPETDSD----GSSD 300
           F++WN+RAPLEVIHE YE+E +E E   P   R +++R+PSL++ YPE+DS+     SS+
Sbjct: 90  FVEWNLRAPLEVIHEAYEDEEEEEEEEDPTRFR-KMERFPSLSLCYPESDSESDSASSSE 149

Query: 301 GGWPESMD----ENMCFMWDEDEDR---DEMIEISLE-------TMNKNISEFQLELEDS 348
             +PE  D    ENM F W+EDE     + +IEI L+        M+K   +F  E ED 
Sbjct: 150 FNFPEIGDWNSPENMGFRWEEDEGGIGCEGLIEIKLDHYSHNRKMMSKTEIDFHAE-EDG 209

HSP 2 Score: 45.1 bits (105), Expect = 1.4e-04
Identity = 27/50 (54.00%), Postives = 37/50 (74.00%), Query Frame = 0


Query: 18 SDPLFSTLLSFSALILLNFPPLLWRILLSPAVLLTGFLFLSLLRLGATQK 68
          S PLFS  ++  +LIL+ FP  L RI LSP +L++G L LSLLRLG+T++
Sbjct: 12 SHPLFSIFITLYSLILIYFPNDLLRIFLSPVLLISGALLLSLLRLGSTRE 61

[Close]

BLAST of Sed0006081 vs. TAIR 10
Match: AT4G05018.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 3.2e-04
Identity = 36/108 (33.33%), Postives = 61/108 (56.48%), Query Frame = 0


Query: 241 FMQWNVR--APLEVIHEEYENESDEPEPRLER-VELDRYPSLAMYYPETDSDGSSDGGWP 300
           FM+WN +  APLEVIH+E E +S        R V + R+PSL+M+ PE+DS+        
Sbjct: 89  FMEWNFKLGAPLEVIHKEEEEQSMTGVKDPTRFVMIKRFPSLSMFNPESDSE-------- 148

Query: 301 ESMDENMCFMWDEDEDRDEMIEISLETMNKNISEFQLELEDSLIEIDI 346
             +D +   M + D  R   +E S++   ++  ++  EL+++L+ ID+
Sbjct: 149 --LDRDFPVMSENDPTRFVRLERSIKP--ESDMDYDSELDNNLV-IDV 183

The following BLAST results are available for this feature:

BLAST of Sed0006081 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926379.1	8.8e-49	43.85	uncharacterized protein LOC111433544 [Cucurbita moschata] >XP_022926380.1 unchar...	[more]
KAG7026597.1	1.2e-48	43.58	hypothetical protein SDJN02_10599, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6594629.1	1.5e-48	43.55	hypothetical protein SDJN03_11182, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023518306.1	5.7e-48	43.05	uncharacterized protein LOC111781826 [Cucurbita pepo subsp. pepo]	[more]
XP_023003982.1	3.7e-47	42.78	uncharacterized protein LOC111497433 [Cucurbita maxima] >XP_023003983.1 uncharac...	[more]

BLAST of Sed0006081 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0006081 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EEY1	4.3e-49	43.85	uncharacterized protein LOC111433544 OS=Cucurbita moschata OX=3662 GN=LOC1114335...	[more]
A0A6J1KY66	1.8e-47	42.78	uncharacterized protein LOC111497433 OS=Cucurbita maxima OX=3661 GN=LOC111497433...	[more]
A0A6J1CME6	2.6e-30	36.04	uncharacterized protein LOC111012458 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J5UL55	3.3e-25	34.84	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS24942 PE=4 S...	[more]
A0A251PF99	9.6e-25	34.28	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G037000 PE=4 SV=1	[more]

BLAST of Sed0006081 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21500.1	5.2e-15	44.53	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G05018.1	3.2e-04	33.33	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 322..342
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..231
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..225
None	No IPR available	PANTHER	PTHR37746	TRANSMEMBRANE PROTEIN	coord: 9..351

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0006081.1	Sed0006081.1	mRNA