Sed0005742 (gene) Chayote v1

Overview


Name	Sed0005742
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ribosomal RNA small subunit methyltransferase H
Location	LG13: 25508264 .. 25512907 (-)
RNA-Seq Expression	Sed0005742
Synteny	Sed0005742

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTCAGATCATCAATGGCGAAGCTCTCTTTGTTCTCTCCATCTCCGTTGCAATCTCTCCGTTTACGCCATTTGATCTCCACCAGCTCTACTCCGCCGCCGAGAATTTTCCGGTGCTGCTCCATTTCCACGGATACTGATGATCGGAAGAAGGCGAGGAAGGAGAAGCAGAAGAAAACGAAGAATCTCAAGGAATTGAATTCTTCGAAATTAGGTTTGGCGAAGGAGAAGAGGAGGACTCGTTCCACTAAGGAGTTTGACGAGAACGCTGTTCAGTTTGGAGATACTTCTGCTCATATTCCAGTGATGCTTGCGGAAGTATTGGACGTGTTTTCTGGAAGATCGCTGCGCTCATTCGTGGATTGCACCGTCGGTGCCGGTGGACATTCTTCTGCTGTGAGTATATCTATCTTAACTTGTTTTTCTTCTTCTTCTCTTGTTTTGTTGTTAATGATTGGTTTGTTACATTTATTAGTGTTAATCGTTACTCGAATGTGTTTTCTGATTCAATTTCTTGATGATTTGCCTATAGAACTTCCCATTGGATTTTTGAGGAATACTATTATGGTATTCAGTTTCTGAATACTAATAATTAGATGTTTTTCCAACTTTCTATTGTCATATGAAATCTATAAGCTGCATAACCTCTTCTTTTTTTTTTGGTTAATTCTCGAGCTATTAAATTATGTAATTATGTTCTATGTGGAGCTACATTTGGCTATTTAATCGACCGATATGATCAACGTGCTTCTCTACTATTTTTCTGTTATCTTGTGTAGTTCCTTTGATGTTGCCACATCAAAATTTGGATTGCACGTGGTCGTTAACGATTGACGTCGTGTCCATAATTTTTCTTTCTCGTGATGCCGAATTCTGATTTTATGTTCTGGGAAAACAGATTATTCAAGCGCATCCGGAGTTGAAATTTTACATGGGAATGGATGTCGATCCAGTTGCACTTGATAAGGCTCAAGATCGGATCAGTGATCTCTTCAGTGAGGATTCTGATTTGAAAGCATATACAATCCTGAAGAACTTCAAATACATGAAATCTCTACTTGCTGACTCAGATGAGAGACCTTTAGAGCCTGGAGTGGATGGGATTTTTATGGATTTGGGAATGTCATCCATGCAGGTATGTGATAGAAAAATGCACTGAGATGTAAAATGTCGTGCTCATCATGTGATGAGGAGTTGAGGACTAACTTACAGTTCTTGTGAAATAGCTGTGCTAATCCATAGACAATGCAAATGGGACACTAGGCAAAAATAGGCGAAAATGCACAACATAGGGTTACTATCGTTTGTTGGCTTATTTGACTTTGAGAATCGTAAAGTGTTTAAATTGAATGAGTTCAACCCATGGATGTCATCTTATCTGGTTATTATTTTCGTACGGGTTACCTTAAGAAAAAAATGTAGTAGGATTAGGTAGTTGTCCTTGTCCTTATCTTATGAGAATAATCGAGGTGTGCACATGCTCAAATACTTGCGGATATAAGAAAAAACAATATAATATAGCTCAAGGTTACTACAAACCAGTCAGGAAAGAAACTAAGGTTTTTACTAATATTAGAAGTAAAAAAAAACTTTGAGAAAGAAATGAGGGGTAAAGTTCCGATTCTCGGTTATAAAAAAACATAGAAGAAATCATTGAAGGATGCCAAGGTAATGCTATTCATTGTTACAGTTAACATTTTCTTTACTGAGAAAACTATGATAGCATAGCATATAACAGAGCTATGTGTCCATGATACATACTCGCTTAATGCTTGATGTAATTCATCTCATAGAGTTTCTCTCTTGTCCCATATTTACCCTCTCAGTTATTTGGTTTAACAGCCTGAAATTTGGTATTTCCTTAATTCTCAGGTGGACGACCCTGAAAGGGGATTTAGTGTTCTTTGCAATGGTCCTCTTGATATGCGAATGGATCCTCAGGTACCAACGAGTTGATAACAAGTTCTTCCTTTCTGAATTTTCATTTTTTATGCTCAACTGTTACTTACCGAGTCAACTATCAACTATGCCTTAACATTCCTATAAAAAAAAACTATTCCTTAACTCTTGCTTTTGTAGTAGTTAAACTTGATTCATCCTTGCCGACAATTTTTATTACGTGAAGTAAAGCGACAGTATTTTATGTTGTGTATTATGTTTGTGTGTGCGAGAGAGAGAGGCCACTGATACTCCTAATGTGGAGTCCTATAATAATTTTTTTTTTTTAATTCAACAATTCGGTTCACGTTGGGGGATTTTAATTTATAACCTCTTGGTTATCAAGTCATAGATTATGCAAGTAGAGCATCGATCTTGTTGACTGAAGTCCTATAACAATTAGTTGTCAGTTACCAAAGCATATTTTTTTAAGAAGACGCCAAAGAATATTTCTGTCTGATGGCAGATTGCTGATGTAGAGCATTGCCCTCTGTTCTCTTTATAGCTAAAGAGCGCTAACTCAACTGACATAAGTATGTGCTCATGATATGTCATAGGTTTGAATCCCCCACCACAAATATTGTTGTACTAAAAAAAAGAAACAACTTAAATTTAATATATTATTCATAGCGCTAGTAAAAAAAGGGCTGATTAGTAGGTTTACTGTAGAAGATCATGGGTTAATTAATTATTTATGTGGACTGATTGAAACAGGTTTGTGGCAGGCAAGTTTAAAAGCAGAGGACATTTTGAACAACTGGCCGGACATAGAAGTGGGGCGTATCATGCGGGTTTATGGAGAAGAAAGCAACTGGTATTCACTCCAAAACAGAATCGTCAAAGCTCGATCACAGGGTGGATTGCATTCCACCAGCGAATTAGTTGATCTTATCCGGAAATCTACGCCTGGTTCTAAAGGTAACCACTGTTTGTTCTTTGTCTATTCACTTAATCCTTTGTTGATTTACTTTCTGGGGTTAAACCGTTAAATTAGAAATTTCAGTATTAAGACTGGGTTTGATAACACCATGAGTTTTGGTTTTTTAAAATTAAACCTGTAAGTTCTATTTCCACCTGTAACTTTTGTTGTGTAATCTATCTTTTGCTAGTCACATTTTGAGAACTAAAAACAGTAGCTTTCAAACACTTTTTGTACAACTGTGACATTACTCCTTCGATGTCTCCTAGTGCCTGACTTAGGGATAGGTGTGGTTACCCTTGTTTAAAAAAAAAAAACACTTGTTTTTTGAATTTGACTAGAAATTTAAGTGCTTCCTCGAAGGAGATGAAAACCATGATATAGAAATTCAGAGAAAATAAGCTAAATTTTCAAACACCAAAAACTAAGATTGAATAATTATCAAACATAGCCTAAACTTTAAAATTTGTATTTATATAGTTTATAAACTTTAAAAGGTGTCTGTTGACCATCCTGGCTTGACCTAATGATTAAGAAGATTTTGAAGGACCAAAAGATTATGGATTCAATTCTTGGTGACTATCTACTAAGGAATTATTTACTACGAATTTTCTTGAGAGTCAAATGTTGTAAGGTCAAATGGATCTCTCTCATGAGAATAGTTGAAGTACACGTAAGCTGACTCAGATGCTCACATATATATTAAATAAAAAGTGTTCAAATTTTCAGATTTGTGTCTATTTGGTTACTAAACTTTAAGAAAATGTCTAATTGATCGTCGACTTTTCAATTTTGTGTTCAATAAATCTTTAAGGCTCCGTTTGATAGTCATTTTGTTTTTTGTTTTTGAAATTTAAGCCCACGACAAGTATCTTTTTTGGATAAGACCACAACAAGTATCTTACCATATATTTTTTTTATTGGGATATCTACATCTTCCCTATATTTTAAGAAACAAATCCAAAATTTGGAAACAAAAAAAGTAGCTTCCAAAAGCTTGTTTTTGTTTTTGAAATTTGGTAGGCATTCGCCTACTTTCTTAAAGAAAGATGGATAGATGGTAGAAAAGATGGAATATTGTAGGAAATTTGAGTAAAAATACGCCTAAATTTCAATAACCAAAAAAAATAAATCAAATGGTTATCAAATAAGCTTAAATGATCTGTTTTATGTCTCTTTTAACTGTCAAGCTCTTTAAAGTATGCTTGGTGTCAATATTGTTTTAACCTAGTGTGTATGGGTTTGGGGGTTGATGTTGGAATTGTCAAGTTCTATGGTCTTTTTAAAGGCAATTTTTTTTTTCCCTATCTAAAGAAGGCAATATTTTTTTTTAAATATTATTAAAAAATGTGATGTAAATAGGAGGAAGACAAGGATGGATAAAGACGGCAACGAGGGTATTCCAAGCTCTAAGGATTGCTGTCAATGACGAACTGAAGGTATTGGAAGACTCCCTTTACAGTTGTTTTGAGTGTCTCGCTCCCGGAGGTCGACTCGCGGTCATCTCATTCCACAGTTTAGAGGACAGGGTTGTGAAACAAACATTTCTAAACATCATTAATCCGAAAACGGAAGAAAATGAGGTAACGAATATCGATGACGAAAACGAAGAATGGATTAAGCAAACTGTAAAGGGTTCAAAAGGTACAGTCCTCACGAAAAGGCCAATAACTCCATCTGAAGAGGAAGAAGGATTAAATCGGCGGTCCAGAAGTGCTAAGCTCAGGGTCATTCAGAAGAACAATGATATTTATAATGTTAGAATGCGAATGGAAAACCACTGA

mRNA sequence

ATGGCGTTCAGATCATCAATGGCGAAGCTCTCTTTGTTCTCTCCATCTCCGTTGCAATCTCTCCGTTTACGCCATTTGATCTCCACCAGCTCTACTCCGCCGCCGAGAATTTTCCGGTGCTGCTCCATTTCCACGGATACTGATGATCGGAAGAAGGCGAGGAAGGAGAAGCAGAAGAAAACGAAGAATCTCAAGGAATTGAATTCTTCGAAATTAGGTTTGGCGAAGGAGAAGAGGAGGACTCGTTCCACTAAGGAGTTTGACGAGAACGCTGTTCAGTTTGGAGATACTTCTGCTCATATTCCAGTGATGCTTGCGGAAGTATTGGACGTGTTTTCTGGAAGATCGCTGCGCTCATTCGTGGATTGCACCGTCGGTGCCGGTGGACATTCTTCTGCTATTATTCAAGCGCATCCGGAGTTGAAATTTTACATGGGAATGGATGTCGATCCAGTTGCACTTGATAAGGCTCAAGATCGGATCAGTGATCTCTTCAGTGAGGATTCTGATTTGAAAGCATATACAATCCTGAAGAACTTCAAATACATGAAATCTCTACTTGCTGACTCAGATGAGAGACCTTTAGAGCCTGGAGTGGATGGGATTTTTATGGATTTGGGAATGTCATCCATGCAGGTGGACGACCCTGAAAGGGGATTTAGTGTTCTTTGCAATGGTCCTCTTGATATGCGAATGGATCCTCAGGCAAGTTTAAAAGCAGAGGACATTTTGAACAACTGGCCGGACATAGAAGTGGGGCGTATCATGCGGGTTTATGGAGAAGAAAGCAACTGGTATTCACTCCAAAACAGAATCGTCAAAGCTCGATCACAGGGTGGATTGCATTCCACCAGCGAATTAGTTGATCTTATCCGGAAATCTACGCCTGGTTCTAAAGGAGGAAGACAAGGATGGATAAAGACGGCAACGAGGGTATTCCAAGCTCTAAGGATTGCTGTCAATGACGAACTGAAGGTATTGGAAGACTCCCTTTACAGTTGTTTTGAGTGTCTCGCTCCCGGAGGTCGACTCGCGGTCATCTCATTCCACAGTTTAGAGGACAGGGTTGTGAAACAAACATTTCTAAACATCATTAATCCGAAAACGGAAGAAAATGAGGTAACGAATATCGATGACGAAAACGAAGAATGGATTAAGCAAACTGTAAAGGGTTCAAAAGGTACAGTCCTCACGAAAAGGCCAATAACTCCATCTGAAGAGGAAGAAGGATTAAATCGGCGGTCCAGAAGTGCTAAGCTCAGGGTCATTCAGAAGAACAATGATATTTATAATGTTAGAATGCGAATGGAAAACCACTGA

Coding sequence (CDS)

ATGGCGTTCAGATCATCAATGGCGAAGCTCTCTTTGTTCTCTCCATCTCCGTTGCAATCTCTCCGTTTACGCCATTTGATCTCCACCAGCTCTACTCCGCCGCCGAGAATTTTCCGGTGCTGCTCCATTTCCACGGATACTGATGATCGGAAGAAGGCGAGGAAGGAGAAGCAGAAGAAAACGAAGAATCTCAAGGAATTGAATTCTTCGAAATTAGGTTTGGCGAAGGAGAAGAGGAGGACTCGTTCCACTAAGGAGTTTGACGAGAACGCTGTTCAGTTTGGAGATACTTCTGCTCATATTCCAGTGATGCTTGCGGAAGTATTGGACGTGTTTTCTGGAAGATCGCTGCGCTCATTCGTGGATTGCACCGTCGGTGCCGGTGGACATTCTTCTGCTATTATTCAAGCGCATCCGGAGTTGAAATTTTACATGGGAATGGATGTCGATCCAGTTGCACTTGATAAGGCTCAAGATCGGATCAGTGATCTCTTCAGTGAGGATTCTGATTTGAAAGCATATACAATCCTGAAGAACTTCAAATACATGAAATCTCTACTTGCTGACTCAGATGAGAGACCTTTAGAGCCTGGAGTGGATGGGATTTTTATGGATTTGGGAATGTCATCCATGCAGGTGGACGACCCTGAAAGGGGATTTAGTGTTCTTTGCAATGGTCCTCTTGATATGCGAATGGATCCTCAGGCAAGTTTAAAAGCAGAGGACATTTTGAACAACTGGCCGGACATAGAAGTGGGGCGTATCATGCGGGTTTATGGAGAAGAAAGCAACTGGTATTCACTCCAAAACAGAATCGTCAAAGCTCGATCACAGGGTGGATTGCATTCCACCAGCGAATTAGTTGATCTTATCCGGAAATCTACGCCTGGTTCTAAAGGAGGAAGACAAGGATGGATAAAGACGGCAACGAGGGTATTCCAAGCTCTAAGGATTGCTGTCAATGACGAACTGAAGGTATTGGAAGACTCCCTTTACAGTTGTTTTGAGTGTCTCGCTCCCGGAGGTCGACTCGCGGTCATCTCATTCCACAGTTTAGAGGACAGGGTTGTGAAACAAACATTTCTAAACATCATTAATCCGAAAACGGAAGAAAATGAGGTAACGAATATCGATGACGAAAACGAAGAATGGATTAAGCAAACTGTAAAGGGTTCAAAAGGTACAGTCCTCACGAAAAGGCCAATAACTCCATCTGAAGAGGAAGAAGGATTAAATCGGCGGTCCAGAAGTGCTAAGCTCAGGGTCATTCAGAAGAACAATGATATTTATAATGTTAGAATGCGAATGGAAAACCACTGA

Protein sequence

MAFRSSMAKLSLFSPSPLQSLRLRHLISTSSTPPPRIFRCCSISTDTDDRKKARKEKQKKTKNLKELNSSKLGLAKEKRRTRSTKEFDENAVQFGDTSAHIPVMLAEVLDVFSGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSLLADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSELVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEENEVTNIDDENEEWIKQTVKGSKGTVLTKRPITPSEEEEGLNRRSRSAKLRVIQKNNDIYNVRMRMENH

Homology

[Close]

BLAST of Sed0005742 vs. NCBI nr
Match: XP_023524199.1 (uncharacterized protein LOC111788179 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 699.1 bits (1803), Expect = 2.4e-197
Identity = 373/451 (82.71%), Postives = 396/451 (87.80%), Query Frame = 0


Query: 1   MAFRSSMAKLSLFSPSPLQSLRLRHLISTSSTPPPRIFRCCSISTDTDDRKKARKEKQKK 60
           MA RSSM KLSLFS SP QS RLR+LIST +TP P IFRCCSIST TD   K +K KQKK
Sbjct: 1   MALRSSMLKLSLFSSSPSQSFRLRYLISTCATPAPSIFRCCSISTATDG-NKVKKAKQKK 60

Query: 61  TKNLK-----------ELNSSKLGLAKEKRRTRSTKEFDENAVQFGDTSAHIPVMLAEVL 120
           TKN+K             +S KL L KEKRRTRSTKEFDE AVQFGDT+AHIPVMLAEVL
Sbjct: 61  TKNVKASTAVPKSSESSSSSLKLALVKEKRRTRSTKEFDEKAVQFGDTAAHIPVMLAEVL 120

Query: 121 DVF---SGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFS 180
           DVF   SGR LRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDP+ALDKAQDRISDLF 
Sbjct: 121 DVFSASSGRPLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISDLFC 180

Query: 181 EDSDLKAYTILKNFKYMKSLLADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNG 240
           EDSDLKAYT+LKNFKYMKSLLADSDE+PLEPGVDGI MDLGMSSMQVDDPERGFSVLC+G
Sbjct: 181 EDSDLKAYTVLKNFKYMKSLLADSDEKPLEPGVDGILMDLGMSSMQVDDPERGFSVLCDG 240

Query: 241 PLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSE 300
           PLDMRMDPQASLKAEDILN+WP+IEVGR++RVYGEESNWYSLQN+IVKARSQGGLH+TSE
Sbjct: 241 PLDMRMDPQASLKAEDILNSWPEIEVGRVLRVYGEESNWYSLQNKIVKARSQGGLHTTSE 300

Query: 301 LVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAV 360
           LVDLIRKSTPG KGGRQGWIKTATRVFQALRIAVNDELKVLED+LYS FECLAPGGRLAV
Sbjct: 301 LVDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELKVLEDALYSAFECLAPGGRLAV 360

Query: 361 ISFHSLEDRVVKQTFLNII-NPKTE---ENEVTNIDDEN------EEWIKQTVKGSKGTV 420
           ISFHSLEDRVVKQTFL+II NPKTE   E EV  ++++N      EEWIKQTVKGSKG +
Sbjct: 361 ISFHSLEDRVVKQTFLDIINNPKTEGWDEEEVIRVNEDNNREEKEEEWIKQTVKGSKGRI 420

Query: 421 LTKRPITPSEEEEGLNRRSRSAKLRVIQKNN 428
           LTKRPITPSEEEE LNRR RSAKLRVIQKNN
Sbjct: 421 LTKRPITPSEEEERLNRRCRSAKLRVIQKNN 450

[Close]

BLAST of Sed0005742 vs. NCBI nr
Match: XP_022940206.1 (uncharacterized protein LOC111445901 [Cucurbita moschata] >XP_022940207.1 uncharacterized protein LOC111445901 [Cucurbita moschata] >XP_022940208.1 uncharacterized protein LOC111445901 [Cucurbita moschata])

HSP 1 Score: 698.0 bits (1800), Expect = 5.3e-197
Identity = 372/451 (82.48%), Postives = 396/451 (87.80%), Query Frame = 0


Query: 1   MAFRSSMAKLSLFSPSPLQSLRLRHLISTSSTPPPRIFRCCSISTDTDDRKKARKEKQKK 60
           MAFRSSM KLSLFS SP QS RLR+LIST +TP P IFRCCSIST TD   K +K KQKK
Sbjct: 1   MAFRSSMLKLSLFSSSPSQSFRLRYLISTCATPAPSIFRCCSISTATDG-NKVKKAKQKK 60

Query: 61  TKNLK-----------ELNSSKLGLAKEKRRTRSTKEFDENAVQFGDTSAHIPVMLAEVL 120
           TKN+K             +S KL L KEKRRTRSTKEFDE AVQFGDT+AHIPVMLAEVL
Sbjct: 61  TKNVKASTAVPKSSESSSSSLKLALVKEKRRTRSTKEFDEKAVQFGDTAAHIPVMLAEVL 120

Query: 121 DVF---SGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFS 180
           DVF   SGR LRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDP+ALDKAQDRISDLF 
Sbjct: 121 DVFSASSGRPLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISDLFC 180

Query: 181 EDSDLKAYTILKNFKYMKSLLADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNG 240
           EDSDLKAYT+LKNFKYMKSLLADSDE+PL+PGVDGI MDLGMSSMQVDDPERGFSVLC+G
Sbjct: 181 EDSDLKAYTVLKNFKYMKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFSVLCDG 240

Query: 241 PLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSE 300
           PLDMRMDPQASLKAEDILN+WP+IEVGR++RVYGEESNWYSLQN+IVKARSQGGLH+TSE
Sbjct: 241 PLDMRMDPQASLKAEDILNSWPEIEVGRVLRVYGEESNWYSLQNKIVKARSQGGLHTTSE 300

Query: 301 LVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAV 360
           LVDLIRKSTPG KGGRQGWIKTATRVFQALRIAVNDELKVLED+LYS FECLAPGGRLAV
Sbjct: 301 LVDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELKVLEDALYSAFECLAPGGRLAV 360

Query: 361 ISFHSLEDRVVKQTFLNII-NPKTE---ENEVTNIDDEN------EEWIKQTVKGSKGTV 420
           ISFHSLEDRVVKQTFL+II NPKTE   E EV  ++++N      EEWIKQ VKGSKG +
Sbjct: 361 ISFHSLEDRVVKQTFLDIINNPKTEGWDEEEVIRVNEDNNREEKEEEWIKQIVKGSKGRI 420

Query: 421 LTKRPITPSEEEEGLNRRSRSAKLRVIQKNN 428
           LTKRPITPSEEEE LNRR RSAKLRVIQKNN
Sbjct: 421 LTKRPITPSEEEERLNRRCRSAKLRVIQKNN 450

[Close]

BLAST of Sed0005742 vs. NCBI nr
Match: KAG7037555.1 (rsmH, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 696.8 bits (1797), Expect = 1.2e-196
Identity = 371/451 (82.26%), Postives = 396/451 (87.80%), Query Frame = 0


Query: 1   MAFRSSMAKLSLFSPSPLQSLRLRHLISTSSTPPPRIFRCCSISTDTDDRKKARKEKQKK 60
           MAFRSSM KLSLFS SP QS RLR+LIST +TP P IFRCCSIST TD   K +K KQKK
Sbjct: 1   MAFRSSMLKLSLFSSSPSQSFRLRYLISTCATPAPSIFRCCSISTATDG-NKVKKAKQKK 60

Query: 61  TKNLK-----------ELNSSKLGLAKEKRRTRSTKEFDENAVQFGDTSAHIPVMLAEVL 120
           TKN+K             +S KL L KEKRRTRSTKEFDE AVQFGDT+AHIPVMLAEVL
Sbjct: 61  TKNVKASTAVPKSSESSSSSLKLALVKEKRRTRSTKEFDEKAVQFGDTAAHIPVMLAEVL 120

Query: 121 DVF---SGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFS 180
           DVF   SGR LRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDP+ALDKAQDRISDLF 
Sbjct: 121 DVFSASSGRPLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISDLFC 180

Query: 181 EDSDLKAYTILKNFKYMKSLLADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNG 240
           EDSDLKAYT+LKNFKYMKSLLADSDE+PL+PGVDGI MDLGMSSMQVDDPERGFSVLC+G
Sbjct: 181 EDSDLKAYTVLKNFKYMKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFSVLCDG 240

Query: 241 PLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSE 300
           PLDMRMDPQASLKAEDILN+WP+IEVGR++RVYGEESNWYSLQN+IVKARSQGGLH+TSE
Sbjct: 241 PLDMRMDPQASLKAEDILNSWPEIEVGRVLRVYGEESNWYSLQNKIVKARSQGGLHTTSE 300

Query: 301 LVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAV 360
           LVDLIRKSTPG KGGRQGWIKTATRVFQALRIAVNDELKVLED+LYS FECLAPGGRLAV
Sbjct: 301 LVDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELKVLEDALYSAFECLAPGGRLAV 360

Query: 361 ISFHSLEDRVVKQTFLNII-NPKTE---ENEVTNIDDEN------EEWIKQTVKGSKGTV 420
           ISFHSLEDRVVKQTFL+II NPKTE   E EV  ++++N      EEWIKQ VKGS+G +
Sbjct: 361 ISFHSLEDRVVKQTFLDIINNPKTEGWDEEEVIRVNEDNNREEKEEEWIKQIVKGSRGRI 420

Query: 421 LTKRPITPSEEEEGLNRRSRSAKLRVIQKNN 428
           LTKRPITPSEEEE LNRR RSAKLRVIQKNN
Sbjct: 421 LTKRPITPSEEEERLNRRCRSAKLRVIQKNN 450

[Close]

BLAST of Sed0005742 vs. NCBI nr
Match: XP_022982487.1 (uncharacterized protein LOC111481293 [Cucurbita maxima])

HSP 1 Score: 696.0 bits (1795), Expect = 2.0e-196
Identity = 373/451 (82.71%), Postives = 395/451 (87.58%), Query Frame = 0


Query: 1   MAFRSSMAKLSLFSPSPLQSLRLRHLISTSSTPPPRIFRCCSISTDTDDRKKARKEKQKK 60
           MAFRSSM KLSLFS SP QS RLR+LIST +TP P IFRCCSIST TD  KK +K KQKK
Sbjct: 39  MAFRSSMLKLSLFSSSPSQSFRLRYLISTCATPAPSIFRCCSISTATDG-KKVKKAKQKK 98

Query: 61  TKNLK-----------ELNSSKLGLAKEKRRTRSTKEFDENAVQFGDTSAHIPVMLAEVL 120
           TKN+K             +S KL L KEKRRTRSTKEFDE AVQFGDT+AHIPVMLAEVL
Sbjct: 99  TKNVKASTAVPKSSESSSSSLKLALVKEKRRTRSTKEFDEKAVQFGDTAAHIPVMLAEVL 158

Query: 121 DVF---SGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFS 180
           DVF   SGRSLRSFVDCTVGAGGHSSAIIQAH ELKFYMGMDVDP+ALDKAQDRISDLF 
Sbjct: 159 DVFSASSGRSLRSFVDCTVGAGGHSSAIIQAHSELKFYMGMDVDPIALDKAQDRISDLFC 218

Query: 181 EDSDLKAYTILKNFKYMKSLLADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNG 240
           EDSDLK YT+LKNFKYMK LLADSDE+PLEPGVDGI MDLGMSSMQVDDPERGFSVL +G
Sbjct: 219 EDSDLKVYTVLKNFKYMKLLLADSDEKPLEPGVDGILMDLGMSSMQVDDPERGFSVLSDG 278

Query: 241 PLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSE 300
           PLDMRMDPQASLKAEDILN+WP++EVGR++RVYGEESNWYSLQN+IVKARSQGGLH+TSE
Sbjct: 279 PLDMRMDPQASLKAEDILNSWPEMEVGRVLRVYGEESNWYSLQNKIVKARSQGGLHTTSE 338

Query: 301 LVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAV 360
           LVDLIRKSTPG KGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYS FECLAPGGRLAV
Sbjct: 339 LVDLIRKSTPGIKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSAFECLAPGGRLAV 398

Query: 361 ISFHSLEDRVVKQTFLNIIN-PKTE---ENEVTNIDDEN------EEWIKQTVKGSKGTV 420
           ISFHSLEDRVVKQTFL+IIN PKTE   E EV  ++D+N      EEWIKQTVKGSKG +
Sbjct: 399 ISFHSLEDRVVKQTFLDIINIPKTEGWDEEEVIRVNDDNNREEKEEEWIKQTVKGSKGRI 458

Query: 421 LTKRPITPSEEEEGLNRRSRSAKLRVIQKNN 428
           LTKRPITPSEEEE LNRR RSAKLRVIQKNN
Sbjct: 459 LTKRPITPSEEEERLNRRCRSAKLRVIQKNN 488

[Close]

BLAST of Sed0005742 vs. NCBI nr
Match: XP_038896155.1 (ribosomal RNA small subunit methyltransferase H [Benincasa hispida])

HSP 1 Score: 686.4 bits (1770), Expect = 1.6e-193
Identity = 361/445 (81.12%), Postives = 391/445 (87.87%), Query Frame = 0


Query: 1   MAFRSSMAKLSLFSPSPLQSLRLRHLISTSSTPPPRIFRCCSISTDTDDRKKARKEKQKK 60
           MAFRSSMAK SLFS SP QSLR +H + T +TPP RIFRCCSI+T  D + KA+KEK+K 
Sbjct: 8   MAFRSSMAKFSLFSYSPSQSLRFQHSLFTCTTPPVRIFRCCSIATAADVKNKAKKEKKKN 67

Query: 61  TKNLKELN-----------SSKLGLAKEKRRTRSTKEFDENAVQFGDTSAHIPVMLAEVL 120
           +KNLK              SSKL L KEKRRTRSTK+FDENA+Q GDT+AHIPVMLAEVL
Sbjct: 68  SKNLKASTSVSKSSESSSLSSKLALVKEKRRTRSTKKFDENAIQVGDTAAHIPVMLAEVL 127

Query: 121 DVF---SGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFS 180
           DVF   SGR LRSFVDCTVGAGGHSSAIIQAH ELKFYMGMDVDP+ALDKAQDRIS LFS
Sbjct: 128 DVFSGSSGRPLRSFVDCTVGAGGHSSAIIQAHAELKFYMGMDVDPIALDKAQDRISALFS 187

Query: 181 EDSDLKAYTILKNFKYMKSLLADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNG 240
           EDSDLKAY +LKNFKY+KSLLADSDE+PL+PGVDGI MDLGMSSMQVDDPERGF VL +G
Sbjct: 188 EDSDLKAYIVLKNFKYVKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFGVLGDG 247

Query: 241 PLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSE 300
           PLDMRMDPQASLKAEDILN+WP+IEVGRI+RVYGEESNWYSLQN+IVKARSQGGLHST+E
Sbjct: 248 PLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTAE 307

Query: 301 LVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAV 360
           LVDLIRKST G KGGRQGWIKTATRVFQALRIAVNDEL VLED+LY+CF+CLAPGGRLAV
Sbjct: 308 LVDLIRKSTLGLKGGRQGWIKTATRVFQALRIAVNDELNVLEDTLYTCFDCLAPGGRLAV 367

Query: 361 ISFHSLEDRVVKQTFLNIINPKTE----ENEVTNIDDENEEWIKQTVKGSKGTVLTKRPI 420
           ISFHSLEDRVVKQTFL+IINPKT+    E ++T I +ENE WIKQTV GSKGTVLTKRPI
Sbjct: 368 ISFHSLEDRVVKQTFLDIINPKTQGDEHEEDITKIVEENEGWIKQTVIGSKGTVLTKRPI 427

Query: 421 TPSEEEEGLNRRSRSAKLRVIQKNN 428
           TPSEEEE LNRRSRSAKLRVIQK N
Sbjct: 428 TPSEEEERLNRRSRSAKLRVIQKKN 452

[Close]

BLAST of Sed0005742 vs. ExPASy Swiss-Prot
Match: Q6MEG4 (Ribosomal RNA small subunit methyltransferase H OS=Protochlamydia amoebophila (strain UWE25) OX=264201 GN=rsmH PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.3e-56
Identity = 132/326 (40.49%), Postives = 190/326 (58.28%), Query Frame = 0


Query: 100 HIPVMLAEVLDVFSGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQD 159
           H  V+L EV++ F    L+ F+D T+GAGGH+ AI++ HPE++ Y+G+D DP AL+ A  
Sbjct: 8   HRSVLLEEVIEAFQPVQLKVFIDGTLGAGGHAEAILEHHPEIELYLGIDQDPNALNIANK 67

Query: 160 RISDLFSEDSDLKAYTILKNFKYMKSLLADSDERPLEPGVDGIFMDLGMSSMQVDDPERG 219
           R+ + + +   LK     +   ++K +   S        +DG+ +DLG+SSMQ+D PERG
Sbjct: 68  RL-EKWKQKILLKQGNFSQFDIFLKEIGFSS--------MDGLLVDLGVSSMQLDQPERG 127

Query: 220 FSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQG 279
           FS   +GPLDMRM+P+  L A DI+N W + ++G+I R YGEE  W      IV+AR   
Sbjct: 128 FSFSKDGPLDMRMNPEGKLTAADIVNTWSEHDLGKIFRDYGEEKKWRLAARTIVQARQVK 187

Query: 280 GLHSTSELVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLA 339
            + +T++L +L++   P      +  I   T +FQALRI VN EL VLE  +   F+ L 
Sbjct: 188 QILTTTDLANLLK---PAFAWNPKKGINPLTLIFQALRICVNRELDVLEQLVSKTFDYLK 247

Query: 340 PGGRLAVISFHSLEDRVVKQTFLNIINPKTEENEVTNIDDENEEWIKQTVKGSKGTVLTK 399
           PGGR+AVISFHSLEDR+VK       + K    E T +        K   K     ++ +
Sbjct: 248 PGGRVAVISFHSLEDRIVKNELRLAASDKW---ETTGLGSGLFRDKKPVAK-----LVNR 307

Query: 400 RPITPSEEEEGLNRRSRSAKLRVIQK 426
           +PI P E+E   N RSRSAK R+ +K
Sbjct: 308 KPICPHEKEIKENPRSRSAKFRIAEK 313

[Close]

BLAST of Sed0005742 vs. ExPASy Swiss-Prot
Match: Q65JY8 (Ribosomal RNA small subunit methyltransferase H OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / NBRC 12200 / NCIMB 9375 / NRRL NRS-1264 / Gibson 46) OX=279010 GN=rsmH PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.2e-55
Identity = 127/326 (38.96%), Postives = 191/326 (58.59%), Query Frame = 0


Query: 100 HIPVMLAEVLDVFSGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQD 159
           H  V+L E +D  + +   ++VDCT+G  GHS  ++    E    +  D D  AL  A++
Sbjct: 4   HTTVLLKETVDGLNVKEDGTYVDCTLGGAGHSEYLLSQLSEKGKLVAFDQDETALRHAKE 63

Query: 160 RISDLFSEDSDLKAYTILKNFKYMKSLLADSDERPLEPGVDGIFMDLGMSSMQVDDPERG 219
           +++D   +   +K+     NF+Y+K  L +         VDG+  DLG+SS Q+D PERG
Sbjct: 64  KLADYEGQVVFIKS-----NFRYLKDRLNEIGITK----VDGVLFDLGVSSPQLDTPERG 123

Query: 220 FSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQG 279
           FS   + PLDMRMD  A L A++++N WP  ++ +I   YGEE     +  +I KAR Q 
Sbjct: 124 FSYHHDAPLDMRMDQSAGLSAKEVVNEWPYEDLVKIFFKYGEEKFSKQIARKIEKAREQS 183

Query: 280 GLHSTSELVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLA 339
            + +T +LVD+I+++ P     R+     A R+FQA+RIAVNDEL+V E++L    E L 
Sbjct: 184 PIETTGQLVDIIKEAIPAP--ARRSGGHPAKRIFQAIRIAVNDELRVFEEALLQAIEVLK 243

Query: 340 PGGRLAVISFHSLEDRVVKQTFLNIINPKTEENEVTNIDDENEEWIKQTVKGSKGTVLTK 399
           PGGR++VI+FHSLEDR+ K TF ++ +P    + +  I  E E  +K         ++ +
Sbjct: 244 PGGRVSVITFHSLEDRICKSTFKDMSSPPELPHGLPVIPKEFEPKLK---------LVNR 303

Query: 400 RPITPSEEEEGLNRRSRSAKLRVIQK 426
           +PIT SEEE   N R+RSAKLR+ +K
Sbjct: 304 KPITASEEELEHNNRARSAKLRIAEK 309

[Close]

BLAST of Sed0005742 vs. ExPASy Swiss-Prot
Match: C6D563 (Ribosomal RNA small subunit methyltransferase H OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=rsmH PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.2e-55
Identity = 131/330 (39.70%), Postives = 190/330 (57.58%), Query Frame = 0


Query: 100 HIPVMLAEVLDVFSGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQD 159
           HI V+L E +D  + +    +VDCT+G  GHS  I+         +  D D  ALD A+ 
Sbjct: 4   HITVLLEEAVDGLAIKPGGIYVDCTLGGAGHSERIVSQLSGGGRLIAFDQDDAALDNARV 63

Query: 160 RISDLFSEDSDLKAYTILKNFKYMKSLLADSDERPLE--PGVDGIFMDLGMSSMQVDDPE 219
           R++      + +K+     NF+Y++ +L   D   ++  P VDGI  DLG+SS Q+D+ E
Sbjct: 64  RLAPYMDRVTLVKS-----NFRYLEEMLLTCDVPTVDGVPQVDGILFDLGVSSPQLDEAE 123

Query: 220 RGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARS 279
           RGFS   + PLDMRMD   +L A DI+N+W + E+ RI+ VYGEE    S+  +IV+AR 
Sbjct: 124 RGFSYNHDAPLDMRMDQGGALTAYDIVNSWEEREISRILHVYGEEKFARSIARKIVQARE 183

Query: 280 QGGLHSTSELVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFEC 339
              + +T EL +L++   P +   R+     A R FQALRIAVNDEL   ED+L    +C
Sbjct: 184 NAPIETTGELAELVKTGIPAA--ARRTGGHPAKRSFQALRIAVNDELGAEEDALEEAVKC 243

Query: 340 LAPGGRLAVISFHSLEDRVVKQTFLNIINPKTEENEVTNIDDENEEWIKQTVKGSKG--T 399
           + PGGR++VI+FHSLEDR+ KQ F + +   T   +             + V G  G   
Sbjct: 244 IRPGGRISVITFHSLEDRICKQLFASYVEKCTCPPD-----------FPKCVCGGTGKLR 303

Query: 400 VLTKRPITPSEEEEGLNRRSRSAKLRVIQK 426
           ++ ++PI P+E+E  +N RSRSAKLRV +K
Sbjct: 304 LVNRKPIVPTEQELEVNPRSRSAKLRVAEK 315

[Close]

BLAST of Sed0005742 vs. ExPASy Swiss-Prot
Match: B0TGB2 (Ribosomal RNA small subunit methyltransferase H OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) OX=498761 GN=rsmH PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 3.6e-55
Identity = 136/326 (41.72%), Postives = 192/326 (58.90%), Query Frame = 0


Query: 100 HIPVMLAEVLDVFSGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQD 159
           HIPV+L +VL+V   R    ++D TVG GGHS+AI+Q        +G+D DP AL  A  
Sbjct: 5   HIPVLLHQVLEVLKPRPEGVYLDGTVGGGGHSAAILQKLSGRGRVIGLDQDPAALAAAGR 64

Query: 160 RISDLFSEDSDLKAYTILKNFKYMKSLLADSDERPLEPGVDGIFMDLGMSSMQVDDPERG 219
           +++  F +    +   +  NF+++ +++A   E  L   +DGI +D+G+SS Q+D+ ERG
Sbjct: 65  KLAS-FGD----RVTLVRSNFRHIGAVVA---ELGLTGKIDGILLDIGVSSHQLDEAERG 124

Query: 220 FSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQG 279
           F+   + PLDMRM+P+++L A  +LN  P+ E+ RI+R YGEE     +   IVK R+  
Sbjct: 125 FTYRMDAPLDMRMNPESALTASKLLNEAPEGEIARILRDYGEERWAKRIAQFIVKRRALQ 184

Query: 280 GLHSTSELVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLA 339
            L  T ELVD+IR + P +   RQ     A R FQALRIAVNDEL  LE++L +  E LA
Sbjct: 185 PLERTGELVDIIRAAIPAA--ARQEGGHPAKRTFQALRIAVNDELGALEEALPAALEALA 244

Query: 340 PGGRLAVISFHSLEDRVVKQTFLNIINPKTEENEVTNIDDENEEWIKQTVKGSKGTVLTK 399
           PGGRLAVISFHSLEDR+VK  F           +       N   +K         ++TK
Sbjct: 245 PGGRLAVISFHSLEDRIVKSFFAEQARGCLCPPDFPVCACGNRPKVK---------IITK 304

Query: 400 RPITPSEEEEGLNRRSRSAKLRVIQK 426
           +P+  S+EE   N R++SAKLR  +K
Sbjct: 305 KPLVGSDEEMRANPRAQSAKLRAAEK 311

[Close]

BLAST of Sed0005742 vs. ExPASy Swiss-Prot
Match: Q8GE08 (Ribosomal RNA small subunit methyltransferase H (Fragment) OS=Heliobacillus mobilis OX=28064 GN=rsmH PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.8e-54
Identity = 135/326 (41.41%), Postives = 196/326 (60.12%), Query Frame = 0


Query: 100 HIPVMLAEVLDVFSGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQD 159
           HIPV+L EVL+    R    ++D TVG GGHS+AI++        +G+D DP AL  A+ 
Sbjct: 5   HIPVLLEEVLEALQPRPDGLYLDGTVGGGGHSAAILEKTAGQGRLIGLDQDPRALAAARI 64

Query: 160 RISDLFSEDSDLKAYTILKNFKYMKSLLADSDERPLEPGVDGIFMDLGMSSMQVDDPERG 219
           ++ + F++   L    +  NF+ + S++   +E   +  +DGI +D+G+SS Q+D+ ERG
Sbjct: 65  KL-EKFADQVTL----VRSNFRQLGSVV---EELGQKGKIDGILLDIGVSSHQLDEAERG 124

Query: 220 FSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQG 279
           F+     PLDMRM+P  ++ A  ILN +P+ E+ RI+  YGEE     +   IV  R++ 
Sbjct: 125 FTYRAEAPLDMRMNPDGAVTAAQILNEYPEGEIFRILWEYGEERWSKRIAQFIVNRRTEQ 184

Query: 280 GLHSTSELVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLA 339
            L ST++LVD+IR + P +   RQ     A R FQALRIAVNDEL  L+++L +  + LA
Sbjct: 185 PLASTTDLVDVIRAAIPAA--ARQEGGHPAKRTFQALRIAVNDELGALQEALPAALDALA 244

Query: 340 PGGRLAVISFHSLEDRVVKQTFLNIINPKTEENEVTNIDDENEEWIKQTVKGSKGTVLTK 399
           P GRLAVISFHSLEDR+VK  F       T   ++          +    K ++  ++T+
Sbjct: 245 PSGRLAVISFHSLEDRIVKNFFAEQAKGCTCPPDMP---------VCGCGKKARLKIITR 304

Query: 400 RPITPSEEEEGLNRRSRSAKLRVIQK 426
           +PIT SEEE  +N RS+SAKLRV QK
Sbjct: 305 KPITGSEEELKINPRSQSAKLRVAQK 311

[Close]

BLAST of Sed0005742 vs. ExPASy TrEMBL
Match: A0A6J1FNN0 (uncharacterized protein LOC111445901 OS=Cucurbita moschata OX=3662 GN=LOC111445901 PE=3 SV=1)

HSP 1 Score: 698.0 bits (1800), Expect = 2.6e-197
Identity = 372/451 (82.48%), Postives = 396/451 (87.80%), Query Frame = 0


Query: 1   MAFRSSMAKLSLFSPSPLQSLRLRHLISTSSTPPPRIFRCCSISTDTDDRKKARKEKQKK 60
           MAFRSSM KLSLFS SP QS RLR+LIST +TP P IFRCCSIST TD   K +K KQKK
Sbjct: 1   MAFRSSMLKLSLFSSSPSQSFRLRYLISTCATPAPSIFRCCSISTATDG-NKVKKAKQKK 60

Query: 61  TKNLK-----------ELNSSKLGLAKEKRRTRSTKEFDENAVQFGDTSAHIPVMLAEVL 120
           TKN+K             +S KL L KEKRRTRSTKEFDE AVQFGDT+AHIPVMLAEVL
Sbjct: 61  TKNVKASTAVPKSSESSSSSLKLALVKEKRRTRSTKEFDEKAVQFGDTAAHIPVMLAEVL 120

Query: 121 DVF---SGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFS 180
           DVF   SGR LRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDP+ALDKAQDRISDLF 
Sbjct: 121 DVFSASSGRPLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISDLFC 180

Query: 181 EDSDLKAYTILKNFKYMKSLLADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNG 240
           EDSDLKAYT+LKNFKYMKSLLADSDE+PL+PGVDGI MDLGMSSMQVDDPERGFSVLC+G
Sbjct: 181 EDSDLKAYTVLKNFKYMKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFSVLCDG 240

Query: 241 PLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSE 300
           PLDMRMDPQASLKAEDILN+WP+IEVGR++RVYGEESNWYSLQN+IVKARSQGGLH+TSE
Sbjct: 241 PLDMRMDPQASLKAEDILNSWPEIEVGRVLRVYGEESNWYSLQNKIVKARSQGGLHTTSE 300

Query: 301 LVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAV 360
           LVDLIRKSTPG KGGRQGWIKTATRVFQALRIAVNDELKVLED+LYS FECLAPGGRLAV
Sbjct: 301 LVDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELKVLEDALYSAFECLAPGGRLAV 360

Query: 361 ISFHSLEDRVVKQTFLNII-NPKTE---ENEVTNIDDEN------EEWIKQTVKGSKGTV 420
           ISFHSLEDRVVKQTFL+II NPKTE   E EV  ++++N      EEWIKQ VKGSKG +
Sbjct: 361 ISFHSLEDRVVKQTFLDIINNPKTEGWDEEEVIRVNEDNNREEKEEEWIKQIVKGSKGRI 420

Query: 421 LTKRPITPSEEEEGLNRRSRSAKLRVIQKNN 428
           LTKRPITPSEEEE LNRR RSAKLRVIQKNN
Sbjct: 421 LTKRPITPSEEEERLNRRCRSAKLRVIQKNN 450

[Close]

BLAST of Sed0005742 vs. ExPASy TrEMBL
Match: A0A6J1IWR1 (uncharacterized protein LOC111481293 OS=Cucurbita maxima OX=3661 GN=LOC111481293 PE=3 SV=1)

HSP 1 Score: 696.0 bits (1795), Expect = 9.8e-197
Identity = 373/451 (82.71%), Postives = 395/451 (87.58%), Query Frame = 0


Query: 1   MAFRSSMAKLSLFSPSPLQSLRLRHLISTSSTPPPRIFRCCSISTDTDDRKKARKEKQKK 60
           MAFRSSM KLSLFS SP QS RLR+LIST +TP P IFRCCSIST TD  KK +K KQKK
Sbjct: 39  MAFRSSMLKLSLFSSSPSQSFRLRYLISTCATPAPSIFRCCSISTATDG-KKVKKAKQKK 98

Query: 61  TKNLK-----------ELNSSKLGLAKEKRRTRSTKEFDENAVQFGDTSAHIPVMLAEVL 120
           TKN+K             +S KL L KEKRRTRSTKEFDE AVQFGDT+AHIPVMLAEVL
Sbjct: 99  TKNVKASTAVPKSSESSSSSLKLALVKEKRRTRSTKEFDEKAVQFGDTAAHIPVMLAEVL 158

Query: 121 DVF---SGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFS 180
           DVF   SGRSLRSFVDCTVGAGGHSSAIIQAH ELKFYMGMDVDP+ALDKAQDRISDLF 
Sbjct: 159 DVFSASSGRSLRSFVDCTVGAGGHSSAIIQAHSELKFYMGMDVDPIALDKAQDRISDLFC 218

Query: 181 EDSDLKAYTILKNFKYMKSLLADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNG 240
           EDSDLK YT+LKNFKYMK LLADSDE+PLEPGVDGI MDLGMSSMQVDDPERGFSVL +G
Sbjct: 219 EDSDLKVYTVLKNFKYMKLLLADSDEKPLEPGVDGILMDLGMSSMQVDDPERGFSVLSDG 278

Query: 241 PLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSE 300
           PLDMRMDPQASLKAEDILN+WP++EVGR++RVYGEESNWYSLQN+IVKARSQGGLH+TSE
Sbjct: 279 PLDMRMDPQASLKAEDILNSWPEMEVGRVLRVYGEESNWYSLQNKIVKARSQGGLHTTSE 338

Query: 301 LVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAV 360
           LVDLIRKSTPG KGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYS FECLAPGGRLAV
Sbjct: 339 LVDLIRKSTPGIKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSAFECLAPGGRLAV 398

Query: 361 ISFHSLEDRVVKQTFLNIIN-PKTE---ENEVTNIDDEN------EEWIKQTVKGSKGTV 420
           ISFHSLEDRVVKQTFL+IIN PKTE   E EV  ++D+N      EEWIKQTVKGSKG +
Sbjct: 399 ISFHSLEDRVVKQTFLDIINIPKTEGWDEEEVIRVNDDNNREEKEEEWIKQTVKGSKGRI 458

Query: 421 LTKRPITPSEEEEGLNRRSRSAKLRVIQKNN 428
           LTKRPITPSEEEE LNRR RSAKLRVIQKNN
Sbjct: 459 LTKRPITPSEEEERLNRRCRSAKLRVIQKNN 488

[Close]

BLAST of Sed0005742 vs. ExPASy TrEMBL
Match: A0A5A7T697 (Ribosomal RNA small subunit methyltransferase H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006930 PE=3 SV=1)

HSP 1 Score: 684.5 bits (1765), Expect = 2.9e-193
Identity = 359/440 (81.59%), Postives = 385/440 (87.50%), Query Frame = 0


Query: 1   MAFRSSMAKLSLFSPSPLQSLRLRHLISTSSTPPPRIFRCCSISTDTDDRKKARKEKQKK 60
           MAFRSS+AK SLFS S  QSL   HL  T +TPPPRIFR CSIST +  + K +KEK KK
Sbjct: 1   MAFRSSIAKFSLFSSSS-QSLHFHHLFFTCTTPPPRIFRFCSISTASGVKNKTKKEKHKK 60

Query: 61  TKNLKELN-----------SSKLGLAKEKRRTRSTKEFDENAVQFGDTSAHIPVMLAEVL 120
           +KNLK              SSKL L KEKRRTRSTKEFDENA+  GDT+AHIPVMLAEVL
Sbjct: 61  SKNLKASTLVSKSSESASLSSKLALVKEKRRTRSTKEFDENAIPIGDTAAHIPVMLAEVL 120

Query: 121 DVF---SGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFS 180
           DVF   SGR LRSFVDCTVGAGGHSSAIIQAHPEL FYMGMDVDP+ALDKAQDRISD FS
Sbjct: 121 DVFSSSSGRPLRSFVDCTVGAGGHSSAIIQAHPELNFYMGMDVDPIALDKAQDRISDFFS 180

Query: 181 EDSDLKAYTILKNFKYMKSLLADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNG 240
           EDSDLKAY +LKNFKY+KSLLADSDE+PL+PGVDGI MDLGMSSMQVDDPERGF VL +G
Sbjct: 181 EDSDLKAYIVLKNFKYLKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDG 240

Query: 241 PLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSE 300
           PLDMRMDPQASLKAEDILNNWP+IEVGRI+R YGEESNWYSLQN+IVKARSQGGLHST++
Sbjct: 241 PLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQGGLHSTTQ 300

Query: 301 LVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAV 360
           L+DLIRKSTPG KGGRQGWIKTATRVFQALRIAVNDEL VL++SLY+CF+CLAPGGRLAV
Sbjct: 301 LLDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAV 360

Query: 361 ISFHSLEDRVVKQTFLNIINPKTEENEVTNIDDENEEWIKQTVKGSKGTVLTKRPITPSE 420
           ISFHSLEDRVVKQTFL+IINPKTE +EV  I DE EEWIKQTVKGSKG VLTKRPITPSE
Sbjct: 361 ISFHSLEDRVVKQTFLDIINPKTEGDEVAKIIDEKEEWIKQTVKGSKGRVLTKRPITPSE 420

Query: 421 EEEGLNRRSRSAKLRVIQKN 427
           EEE LNRRSRSAKLRVIQKN
Sbjct: 421 EEERLNRRSRSAKLRVIQKN 439

[Close]

BLAST of Sed0005742 vs. ExPASy TrEMBL
Match: A0A1S3CR02 (ribosomal RNA small subunit methyltransferase H OS=Cucumis melo OX=3656 GN=LOC103503773 PE=3 SV=1)

HSP 1 Score: 684.5 bits (1765), Expect = 2.9e-193
Identity = 359/440 (81.59%), Postives = 385/440 (87.50%), Query Frame = 0


Query: 1   MAFRSSMAKLSLFSPSPLQSLRLRHLISTSSTPPPRIFRCCSISTDTDDRKKARKEKQKK 60
           MAFRSS+AK SLFS S  QSL   HL  T +TPPPRIFR CSIST +  + K +KEK KK
Sbjct: 1   MAFRSSIAKFSLFSSSS-QSLHFHHLFFTCTTPPPRIFRFCSISTASGVKNKTKKEKHKK 60

Query: 61  TKNLKELN-----------SSKLGLAKEKRRTRSTKEFDENAVQFGDTSAHIPVMLAEVL 120
           +KNLK              SSKL L KEKRRTRSTKEFDENA+  GDT+AHIPVMLAEVL
Sbjct: 61  SKNLKASTLVSKSSESASLSSKLALVKEKRRTRSTKEFDENAIPIGDTAAHIPVMLAEVL 120

Query: 121 DVF---SGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFS 180
           DVF   SGR LRSFVDCTVGAGGHSSAIIQAHPEL FYMGMDVDP+ALDKAQDRISD FS
Sbjct: 121 DVFSSSSGRPLRSFVDCTVGAGGHSSAIIQAHPELNFYMGMDVDPIALDKAQDRISDFFS 180

Query: 181 EDSDLKAYTILKNFKYMKSLLADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNG 240
           EDSDLKAY +LKNFKY+KSLLADSDE+PL+PGVDGI MDLGMSSMQVDDPERGF VL +G
Sbjct: 181 EDSDLKAYIVLKNFKYLKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDG 240

Query: 241 PLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSE 300
           PLDMRMDPQASLKAEDILNNWP+IEVGRI+R YGEESNWYSLQN+IVKARSQGGLHST++
Sbjct: 241 PLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQGGLHSTTQ 300

Query: 301 LVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAV 360
           L+DLIRKSTPG KGGRQGWIKTATRVFQALRIAVNDEL VL++SLY+CF+CLAPGGRLAV
Sbjct: 301 LLDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAV 360

Query: 361 ISFHSLEDRVVKQTFLNIINPKTEENEVTNIDDENEEWIKQTVKGSKGTVLTKRPITPSE 420
           ISFHSLEDRVVKQTFL+IINPKTE +EV  I DE EEWIKQTVKGSKG VLTKRPITPSE
Sbjct: 361 ISFHSLEDRVVKQTFLDIINPKTEGDEVAKIIDEKEEWIKQTVKGSKGRVLTKRPITPSE 420

Query: 421 EEEGLNRRSRSAKLRVIQKN 427
           EEE LNRRSRSAKLRVIQKN
Sbjct: 421 EEERLNRRSRSAKLRVIQKN 439

[Close]

BLAST of Sed0005742 vs. ExPASy TrEMBL
Match: A0A0A0LDT0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881630 PE=3 SV=1)

HSP 1 Score: 682.9 bits (1761), Expect = 8.6e-193
Identity = 359/444 (80.86%), Postives = 388/444 (87.39%), Query Frame = 0


Query: 1   MAFRSSMAKLSLFSPSPLQSLRLRHLISTSSTPPPRIFRCCSISTDTDDRKKARKEKQKK 60
           MAFRSS+AK SLFS S  QSL  +H   T +TPPPRIFR CSIST +  + KA+KEKQKK
Sbjct: 1   MAFRSSIAKFSLFSSSSSQSLHFQHFFFTCTTPPPRIFRFCSISTASGVKNKAKKEKQKK 60

Query: 61  TKNLKELN-----------SSKLGLAKEKRRTRSTKEFDENAVQFGDTSAHIPVMLAEVL 120
           +KNLK              SSKL L KEKRRTRSTKEFDENA+  GDT+AHIPVMLAEVL
Sbjct: 61  SKNLKASTSVSKSSESASLSSKLALVKEKRRTRSTKEFDENAIPIGDTAAHIPVMLAEVL 120

Query: 121 DVF---SGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPVALDKAQDRISDLFS 180
           DVF   SGR LRSFVDCTVGAGGHSSAIIQAHPEL FYMGMDVDP+ALDKAQDRISD FS
Sbjct: 121 DVFASSSGRPLRSFVDCTVGAGGHSSAIIQAHPELNFYMGMDVDPIALDKAQDRISDFFS 180

Query: 181 EDSDLKAYTILKNFKYMKSLLADSDERPLEPGVDGIFMDLGMSSMQVDDPERGFSVLCNG 240
           EDSDLKAY +LKNFKY+KSLLADSDE+PL+PGVDG+ MDLGMSSMQVDDPERGF VL +G
Sbjct: 181 EDSDLKAYIVLKNFKYVKSLLADSDEKPLDPGVDGMMMDLGMSSMQVDDPERGFRVLGDG 240

Query: 241 PLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQNRIVKARSQGGLHSTSE 300
           PLDMRMDPQASLKAEDILNNWP+ EVGRI+RVYGEESNWYSLQN+IVKARSQGGLHST++
Sbjct: 241 PLDMRMDPQASLKAEDILNNWPETEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTQ 300

Query: 301 LVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDSLYSCFECLAPGGRLAV 360
           L+DLIRKST G KGGRQGWIKTATRVFQALRIAVNDEL VL++SLY+CF+CLAPGGRLAV
Sbjct: 301 LLDLIRKSTLGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAV 360

Query: 361 ISFHSLEDRVVKQTFLNIINPKTEEN----EVTNIDDENEEWIKQTVKGSKGTVLTKRPI 420
           ISFHSLEDRVVKQTFL+IINPKTE +    EVT I +ENEEWIKQTVKG KGTVLTKRPI
Sbjct: 361 ISFHSLEDRVVKQTFLDIINPKTEGDEDGGEVTKIMEENEEWIKQTVKGLKGTVLTKRPI 420

Query: 421 TPSEEEEGLNRRSRSAKLRVIQKN 427
           TPSEEEE LNRRSRSAKLRVIQKN
Sbjct: 421 TPSEEEERLNRRSRSAKLRVIQKN 444

[Close]

BLAST of Sed0005742 vs. TAIR 10
Match: AT5G10910.1 (mraW methylase family protein )

HSP 1 Score: 460.7 bits (1184), Expect = 1.3e-129
Identity = 254/410 (61.95%), Postives = 306/410 (74.63%), Query Frame = 0


Query: 34  PPRIFRCCSISTDTDDRKKARKEKQKKTKNLK-ELNSSKLGLAKEKRRTRSTKEFDENAV 93
           P R     + + ++ + KK  KEK+K+ K ++ E  +++  + KEKRRTRS++ ++   +
Sbjct: 29  PRRSINVIAGNLNSSETKKKEKEKRKRRKEIEVEKATAEAVVNKEKRRTRSSRGYE---L 88

Query: 94  QFGD--TSAHIPVMLAEVLDVFSGRSLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVD 153
             GD   S+H+PVML EVLD+FS   LRSFVDCT+GA GHSS+IIQ+H ELK ++GMDVD
Sbjct: 89  ADGDEVPSSHVPVMLGEVLDIFSSVRLRSFVDCTLGAAGHSSSIIQSHSELKNFVGMDVD 148

Query: 154 PVALDKAQDRISDLFSEDSDLKAYTILKNFKYMKSLLADSDERPLEPGVDGIFMDLGMSS 213
           PVA       I  L      LKA  +LKNFKY+KS++AD+    L+ GVDGI MDLGMSS
Sbjct: 149 PVARKLGHFHIDSLM--HPTLKASIVLKNFKYIKSVIADTQPELLDVGVDGILMDLGMSS 208

Query: 214 MQVDDPERGFSVLCNGPLDMRMDPQASLKAEDILNNWPDIEVGRIMRVYGEESNWYSLQN 273
           MQV++PERGFSVL  GPLDMRMDPQA+L AEDI+N+WP+ E+GR++R YGEESNWY LQN
Sbjct: 209 MQVNNPERGFSVLQEGPLDMRMDPQATLTAEDIVNSWPESELGRVLRDYGEESNWYLLQN 268

Query: 274 RIVKARSQGGLHSTSELVDLIRKSTPGSKGGRQGWIKTATRVFQALRIAVNDELKVLEDS 333
           RIVKAR  GGLHST ELVDLIR ++P S+GGRQGWIKTATRVFQ LRIAVNDELK L++S
Sbjct: 269 RIVKARLNGGLHSTGELVDLIRGTSPASRGGRQGWIKTATRVFQGLRIAVNDELKTLQNS 328

Query: 334 LYSCFECLAPGGRLAVISFHSLEDRVVKQTFLNIINPKTE---------------ENEVT 393
           LYS F+ LAPGGRLAVISFHSLEDRVVKQTFL+I+  + E               E  V 
Sbjct: 329 LYSSFDVLAPGGRLAVISFHSLEDRVVKQTFLDILGFQREEINGEGSSVKPERQIEERVE 388

Query: 394 NIDDENEEWIKQTVKGSKGTVLTKRPITPSEEEEGLNRRSRSAKLRVIQK 426
               E EEWIKQTV  SKG +LTKRPITPSEEEE LNRR+RSAKLRVIQK
Sbjct: 389 KELKEKEEWIKQTVIASKGVILTKRPITPSEEEERLNRRARSAKLRVIQK 433

The following BLAST results are available for this feature:

BLAST of Sed0005742 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023524199.1	2.4e-197	82.71	uncharacterized protein LOC111788179 [Cucurbita pepo subsp. pepo]	[more]
XP_022940206.1	5.3e-197	82.48	uncharacterized protein LOC111445901 [Cucurbita moschata] >XP_022940207.1 unchar...	[more]
KAG7037555.1	1.2e-196	82.26	rsmH, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022982487.1	2.0e-196	82.71	uncharacterized protein LOC111481293 [Cucurbita maxima]	[more]
XP_038896155.1	1.6e-193	81.12	ribosomal RNA small subunit methyltransferase H [Benincasa hispida]	[more]

BLAST of Sed0005742 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6MEG4	3.3e-56	40.49	Ribosomal RNA small subunit methyltransferase H OS=Protochlamydia amoebophila (s...	[more]
Q65JY8	1.2e-55	38.96	Ribosomal RNA small subunit methyltransferase H OS=Bacillus licheniformis (strai...	[more]
C6D563	1.2e-55	39.70	Ribosomal RNA small subunit methyltransferase H OS=Paenibacillus sp. (strain JDR...	[more]
B0TGB2	3.6e-55	41.72	Ribosomal RNA small subunit methyltransferase H OS=Heliobacterium modesticaldum ...	[more]
Q8GE08	1.8e-54	41.41	Ribosomal RNA small subunit methyltransferase H (Fragment) OS=Heliobacillus mobi...	[more]

BLAST of Sed0005742 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FNN0	2.6e-197	82.48	uncharacterized protein LOC111445901 OS=Cucurbita moschata OX=3662 GN=LOC1114459...	[more]
A0A6J1IWR1	9.8e-197	82.71	uncharacterized protein LOC111481293 OS=Cucurbita maxima OX=3661 GN=LOC111481293...	[more]
A0A5A7T697	2.9e-193	81.59	Ribosomal RNA small subunit methyltransferase H OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3CR02	2.9e-193	81.59	ribosomal RNA small subunit methyltransferase H OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LDT0	8.6e-193	80.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881630 PE=3 SV=1	[more]

BLAST of Sed0005742 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10910.1	1.3e-129	61.95	mraW methylase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 50..70
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 100..423 e-value: 2.5E-87 score: 295.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..82
IPR023397	S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily	GENE3D	1.10.150.170	Putative methyltransferase TM0872, insert domain	coord: 216..323 e-value: 2.5E-87 score: 295.1
IPR023397	S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily	SUPERFAMILY	81799	Putative methyltransferase TM0872, insert domain	coord: 218..321
IPR002903	Ribosomal RNA small subunit methyltransferase H	TIGRFAM	TIGR00006	TIGR00006	coord: 98..426 e-value: 2.1E-78 score: 261.8
IPR002903	Ribosomal RNA small subunit methyltransferase H	PFAM	PF01795	Methyltransf_5	coord: 98..425 e-value: 5.7E-88 score: 295.4
IPR002903	Ribosomal RNA small subunit methyltransferase H	PANTHER	PTHR11265	S-ADENOSYL-METHYLTRANSFERASE MRAW	coord: 79..426
IPR002903	Ribosomal RNA small subunit methyltransferase H	HAMAP	MF_01007	16SrRNA_methyltr_H	coord: 100..426 score: 32.58707
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 100..425

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0005742.1	Sed0005742.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070475	rRNA base methylation
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0071424	rRNA (cytosine-N4-)-methyltransferase activity
molecular_function	GO:0008168	methyltransferase activity