Sed0004751 (gene) Chayote v1

Overview


Name	Sed0004751
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein CWC15 homolog
Location	LG03: 8666045 .. 8669691 (-)
RNA-Seq Expression	Sed0004751
Synteny	Sed0004751

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTACTGCAGCTCGACCCACATGGGCACCGGCCAAAGGTGGAAATGAACAAGGCGGCACTAGAATTTTTGGCCCTTCCCAGAAATATTCCTCCAGAGACATCGCTGCTCATACCACCTTGAAACCCAGGTCTGTTTATTTAATGGATATTATAATTCTTAGTTGGAGGCCGCATGTACTATACTTTTTTCTTTCATTTTAATATTCTGTCCCTGTCTAAGGTTCAGTGCATGTCGATTATTGCCATGGGGTATACGCCTACAATATTAAGATGTCAACGAAACAGTGGGAAATTAATTACTAGGATATTCCATGATGGTTCATGTATTATAGTTTGTTGATCACGTTTGTGATAGGTTTGGGCCTTAGGAATATTAATGCATAATATAAGGGTATATTAGGAAGTACTTGAAGAGCAAGTTAGAGGTTAGTGCTTATAAATAGAGAAGGATAGTTAACATGGAGGTATCTTTGAATTGTATGAGAGTTAGGGCTAGGGAGGGTCCAAATACCTCGAATCACTTGGTTTATCGTGTATGTTCGTGATGATTTGCTAATAAATACATCTAGATTCTATCAGTTTGTTCATAAATTTTCATCGGTTGAGTCCATCGTTCCTAGCCTCTCTTTCTTTTCTTTTTTTTTATAGGAAACTAAAAGTTTCATCGATGATTGAAAGGTTATAGCCTATCGAAACATTAAAGGATACCTAGGAAGCATGGACACTTCTGTTTTGACAAAGTATCTGTGTTGTACTCGTGTCTGACACCGATACTTCTGGACAGTTGTCGGACACGTGTCCGACACTCAAAATTCCGTGTCCTATTTTATTATTAATATTTTCAATTTCGGACACTTTACGGACACACCATGGACACTTCATGGACACCTCAATTAAGACTTATTTGTTTTCAATAACGGATGACATGACGACGGGAATTGTTGGTGGAGGCAGTCGACGACGATGTCTATTGAAGATAGATGCACTAAAATGGAAAAAGGAAAGAAAGAGAGAAAATAGAATGGAGGGAAGGAAAATGAGATAAAAAATAAATATTTAGAAATTGTTATAGGTAGGCTTACAACTAATTAAAATATTTTGGATTTCATCTTTTAATAGTATATTATAAAAAATAATAATAAATCATGTGTCCTCGACGTATCCATATCCTACATTTTTAAATAATGGCATGTCTATGTATTCGTATCGTGTCGTGTCCGTATCTCATGCCTGTGTCCGTACTTCTTAGAAGGATACTATGCCATTGAGATATTAAAGTGGTTAAGTCATAGTTACAAAAAGGGGAAATAGAACGACATCAATACAAGGCCAAGTAGTTTATAGATTCAAGTAGTTTATAGGTTGAGTGAGTTCATCATTCCCAGCCTCTCTTTCTTGGTTTTTTCTAGTCTTCTATGTTGGTGACTTCTAAGGAATGATGATCGCACATCGATATATGTTGGGGTCGTTGTTTATGTCGTGCTCTGAGATTTCTAGTGAAGTATAGAGTTCAACAATACGTATGAGCATTTTCAAATGACGTTTCATTTTGGAATTCTGAGAACCGAATTGGTTTAGGTGTATGCCTCATAATGGGGTATAGATGGCTTCACTTTTTGCCTTGTGTTAATGGTCCATACCCACTAATTCTCAAGACTAAAGCTTGTTGTTGAACCAGTCTAAAGCTTGGGTTCGATTTCATCTTCGAAGGAATTTGAATTATTTCAGACCCACCTGATTTTTACATCCAAATCAAATATCTTCAAGAAAATTATGGTCTCTAATTACTTGTCATTTAAGATGTATGTAGAAAGGATGGACAAGATACCCATGATGAATTGCAAAGGAGGAATCTCAGGGACGAGTTAGAAGATCGTGAAAGGAGGCATTTTTCATCTAAGAATAAGTCGTACGGTAAACACATCCTTTCTTTAGAAAAATGTAGAATAAGGTTTTTTGTTTGTTACCGTAACAGTTCTTACGGTTTTGTTCAAACATCCTTATAGTTATTCCATGCTGTTGTGACATGTTTACTGTTAGTTTATCATGACTCACTTGTATTATTGCAGATGATAGAGATCATAGAAAAGGAAACCAACTTCTGTTAGAAGGTGAATTCACCAGCTCTTGTATGTTCAGATTTTAGAACATGTCCGGCAATTGTTTATTTCACCAGTTATTTTTAATGCTTATCAGGTGGAAAGAGAGATATTGAAGATCGTATTATTCCACGAAGTTTAGATGCTGATGATTCTGATGTGGATGTTAAAAGTGACAACGAGAGGTTGGTTGGTTGGTTCTCCATTTTATTGATTTATTAATAATATTATCTTCCTAGCCTTTTTTCTCAAGGCTGTAATTTACTGTCTTTATATAGTTTGAATCCTTGGTCTAAGACCTGGGTAGTCCAGCTGGTTTTAGGGTTTAGTATAATTGAAATATTTAATATTTTATAGTAGTGACGACGATGATGATGACGAAGATGATACTGAAGCTCTTTTGGCCGAGCTGGAACAAATAAAAAAGGAAAGAGTGGAGGAGAAGCTTCGGAAGGTGAGCCTTTTGTCCATCCAGACAGCTTCATGATCTGAAGTTGTGCTTGCAATACCTTTGTTTTTGTCCAAGATTTAAGAAAAATGTACTGTGAGTTGAGTGATTAGTAACTGGGATCCCTCGAACTAGGAAGCACGGACACTTCTATTTTGACAAAGTATCTGTGTCGTACTCGTGTCCGACACCGATACTTTCGGACACTCGTCGGACACGTGTCCGACACTCAAAATTCCGTGTCCTCTTTTATTATTATTATTTTCAATTTCGGACACTTAACGGACACACCATGGACACTTCACGGACACCTCAATTAAGACTTATTTGTTTCCAATGATGGATGACATGACAACAGGAAGTGTTGGTGGAGGCCGTCGATGACGATGTCTATCGAAGATAGATGGACTAAAATGGAAAAAGGAAAGAAAGAGAGAAAATAGAATGTAGGGAAGGAAAATGAGATAAAAACTAAAATATTTAGAAATGATTATGGGTAGGCTTATAACTAACTAAAATATTTGGATTTCATCTTTTAATAGTATATTATAAAAAATAATAATAAATCACGTATCCTCGACGTATCCGTATCCTGCATTTTTAAATAATGGCGTGTCTACGTATTCGTGTCGTGTCGTATCCGTATCTTGTGTCCGTGTCCATGCTTCTTAGCCCTCGAATGATGATACCCGATCGAATCTTTTATTATTAATGAACTCTGGAAAGCTGAGTTTAATTTTGCTTCATCAGTTGCTTAAATCTGTTCTGATGTATAGGAAAGACAATAACGGGAGGAAGAGCTTAAAGTCAAGGAATCAGAGTTATTTCGAGGAAATCCACTGCTTAACGAGCTACCTTCTTCTTTTAGTGTCAAAAGAAGGTTAGTTGGCATGATTCAGCCATTTTCCATAACTGCACTTGTTTATTTGAACTTCAACTGATTCAACTTCCTAATAACTTCTCGGTCAGATGGGACGATGATGTAGTTAGTGTTCAAGAACCAGGCTCGTGGCGAAATGAAGACTCCTAAGCGCTTTATAAACGATACCATCAGGAGTGACTTCCACCGAAAATTCTTGCACAAGTACATGAAGTAA

mRNA sequence

ATGACTACTGCAGCTCGACCCACATGGGCACCGGCCAAAGGTGGAAATGAACAAGGCGGCACTAGAATTTTTGGCCCTTCCCAGAAATATTCCTCCAGAGACATCGCTGCTCATACCACCTTGAAACCCAGAAAGGATGGACAAGATACCCATGATGAATTGCAAAGGAGGAATCTCAGGGACGAGTTAGAAGATCGTGAAAGGAGGCATTTTTCATCTAAGAATAAGTCGTACGATGATAGAGATCATAGAAAAGGAAACCAACTTCTGTTAGAAGGTGGAAAGAGAGATATTGAAGATCGTATTATTCCACGAAGTTTAGATGCTGATGATTCTGATGTGGATGTTAAAAGTGACAACGAGAGTAGTGACGACGATGATGATGACGAAGATGATACTGAAGCTCTTTTGGCCGAGCTGGAACAAATAAAAAAGGAAAGAGTGGAGGAGAAGCTTCGGAAGGAAGAGCTTAAAGTCAAGGAATCAGAGTTATTTCGAGGAAATCCACTGCTTAACGAGCTACCTTCTTCTTTTAGTGTCAAAAGAAGGTTATTAGTGTTCAAGAACCAGGCTCGTGGCGAAATGAAGACTCCTAAGCGCTTTATAAACGATACCATCAGGAGTGACTTCCACCGAAAATTCTTGCACAAGTACATGAAGTAA

Coding sequence (CDS)

ATGACTACTGCAGCTCGACCCACATGGGCACCGGCCAAAGGTGGAAATGAACAAGGCGGCACTAGAATTTTTGGCCCTTCCCAGAAATATTCCTCCAGAGACATCGCTGCTCATACCACCTTGAAACCCAGAAAGGATGGACAAGATACCCATGATGAATTGCAAAGGAGGAATCTCAGGGACGAGTTAGAAGATCGTGAAAGGAGGCATTTTTCATCTAAGAATAAGTCGTACGATGATAGAGATCATAGAAAAGGAAACCAACTTCTGTTAGAAGGTGGAAAGAGAGATATTGAAGATCGTATTATTCCACGAAGTTTAGATGCTGATGATTCTGATGTGGATGTTAAAAGTGACAACGAGAGTAGTGACGACGATGATGATGACGAAGATGATACTGAAGCTCTTTTGGCCGAGCTGGAACAAATAAAAAAGGAAAGAGTGGAGGAGAAGCTTCGGAAGGAAGAGCTTAAAGTCAAGGAATCAGAGTTATTTCGAGGAAATCCACTGCTTAACGAGCTACCTTCTTCTTTTAGTGTCAAAAGAAGGTTATTAGTGTTCAAGAACCAGGCTCGTGGCGAAATGAAGACTCCTAAGCGCTTTATAAACGATACCATCAGGAGTGACTTCCACCGAAAATTCTTGCACAAGTACATGAAGTAA

Protein sequence

MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKDGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGNQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDNESSDDDDDDEDDTEALLAELEQIKKERVEEKLRKEELKVKESELFRGNPLLNELPSSFSVKRRLLVFKNQARGEMKTPKRFINDTIRSDFHRKFLHKYMK

Homology

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BLAST of Sed0004751 vs. NCBI nr
Match: XP_022950127.1 (protein CWC15 homolog isoform X1 [Cucurbita moschata] >XP_023005525.1 protein CWC15 homolog isoform X1 [Cucurbita maxima] >XP_023540512.1 protein CWC15 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 375.2 bits (962), Expect = 3.9e-100
Identity = 208/231 (90.04%), Postives = 215/231 (93.07%), Query Frame = 0


Query: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKDGQDTHDELQRRNLR 60
           MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIA+HTTLKPRK+GQDTHDELQRRNLR
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60

Query: 61  DELEDRERRHFSSKNKSYDDRDHRKGNQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 120
           DELEDRERRHFSSKNKSYDDRDHRKG+QLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN
Sbjct: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 120

Query: 121 ESSDD--DDDDEDDTEALLAELEQIKKERVEEKLRK------EELKVKESELFRGNPLLN 180
           ESSDD  DDDDEDDTEALLAELEQIKKER EEKLRK      EELKVKE+EL RGNPLLN
Sbjct: 121 ESSDDDEDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN 180

Query: 181 ELPSSFSVKRRL---LVFKNQARGEMKTPKRFINDTIRSDFHRKFLHKYMK 221
           E P+SFSVKRR    +VFKNQARGE KTPKRFINDTIR+DFHRKFLHKYMK
Sbjct: 181 EQPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK 231

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BLAST of Sed0004751 vs. NCBI nr
Match: KAG7028289.1 (Photosystem I reaction center subunit V, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 375.2 bits (962), Expect = 3.9e-100
Identity = 208/231 (90.04%), Postives = 215/231 (93.07%), Query Frame = 0


Query: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKDGQDTHDELQRRNLR 60
           MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIA+HTTLKPRK+GQDTHDELQRRNLR
Sbjct: 237 MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 296

Query: 61  DELEDRERRHFSSKNKSYDDRDHRKGNQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 120
           DELEDRERRHFSSKNKSYDDRDHRKG+QLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN
Sbjct: 297 DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 356

Query: 121 ESSDD--DDDDEDDTEALLAELEQIKKERVEEKLRK------EELKVKESELFRGNPLLN 180
           ESSDD  DDDDEDDTEALLAELEQIKKER EEKLRK      EELKVKE+EL RGNPLLN
Sbjct: 357 ESSDDDEDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN 416

Query: 181 ELPSSFSVKRRL---LVFKNQARGEMKTPKRFINDTIRSDFHRKFLHKYMK 221
           E P+SFSVKRR    +VFKNQARGE KTPKRFINDTIR+DFHRKFLHKYMK
Sbjct: 417 EQPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK 467

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BLAST of Sed0004751 vs. NCBI nr
Match: XP_038905802.1 (protein CWC15 homolog [Benincasa hispida])

HSP 1 Score: 374.8 bits (961), Expect = 5.2e-100
Identity = 206/229 (89.96%), Postives = 213/229 (93.01%), Query Frame = 0


Query: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKDGQDTHDELQRRNLR 60
           MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIA+HTTLKPRK+GQDTHDELQRRNLR
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60

Query: 61  DELEDRERRHFSSKNKSYDDRDHRKGNQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 120
           DELEDRERRHFSSKNKSYDDRDHRKG+QLLLEGGKRDIEDRIIPRSLDADDSDVDVKSD+
Sbjct: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDD 120

Query: 121 ESSDDDDDDEDDTEALLAELEQIKKERVEEKLRK------EELKVKESELFRGNPLLNEL 180
           ES DDDDDDEDDTEALLAELEQIKKER EEKLRK      EELKVKE+EL RGNPLLNE 
Sbjct: 121 ESDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQ 180

Query: 181 PSSFSVKRRL---LVFKNQARGEMKTPKRFINDTIRSDFHRKFLHKYMK 221
           PSSFSVKRR    +VFKNQARGE KTPKRFINDTIR+DFHRKFL KYMK
Sbjct: 181 PSSFSVKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQKYMK 229

[Close]

BLAST of Sed0004751 vs. NCBI nr
Match: XP_022950134.1 (protein CWC15 homolog isoform X2 [Cucurbita moschata] >XP_023005526.1 protein CWC15 homolog isoform X2 [Cucurbita maxima] >XP_023540513.1 protein CWC15 homolog isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 374.0 bits (959), Expect = 8.8e-100
Identity = 207/230 (90.00%), Postives = 214/230 (93.04%), Query Frame = 0


Query: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKDGQDTHDELQRRNLR 60
           MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIA+HTTLKPRK+GQDTHDELQRRNLR
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60

Query: 61  DELEDRERRHFSSKNKSYDDRDHRKGNQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 120
           DELEDRERRHFSSKNKSYDDRDHRKG+QLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN
Sbjct: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 120

Query: 121 ESSDD-DDDDEDDTEALLAELEQIKKERVEEKLRK------EELKVKESELFRGNPLLNE 180
           ES DD DDDDEDDTEALLAELEQIKKER EEKLRK      EELKVKE+EL RGNPLLNE
Sbjct: 121 ESDDDEDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNE 180

Query: 181 LPSSFSVKRRL---LVFKNQARGEMKTPKRFINDTIRSDFHRKFLHKYMK 221
            P+SFSVKRR    +VFKNQARGE KTPKRFINDTIR+DFHRKFLHKYMK
Sbjct: 181 QPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK 230

[Close]

BLAST of Sed0004751 vs. NCBI nr
Match: XP_022158066.1 (protein CWC15 homolog [Momordica charantia] >XP_022158067.1 protein CWC15 homolog [Momordica charantia])

HSP 1 Score: 373.2 bits (957), Expect = 1.5e-99
Identity = 207/231 (89.61%), Postives = 213/231 (92.21%), Query Frame = 0


Query: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKDGQDTHDELQRRNLR 60
           MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIA+HTTLKPRK+GQDTHDELQRRNLR
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60

Query: 61  DELEDRERRHFSSKNKSYDDRDHRKGNQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 120
           DELEDRERRHFSSKNKSYDDRDHRKG+Q LLEGGKRDIEDRIIPRSLDADDSDVDVKSDN
Sbjct: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQFLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 120

Query: 121 ESSDDDD--DDEDDTEALLAELEQIKKERVEEKLRK------EELKVKESELFRGNPLLN 180
           ES DDDD  DDEDDTEALLAELEQIKKER EEKLRK      EELKVKE+EL RGNPLLN
Sbjct: 121 ESDDDDDDNDDEDDTEALLAELEQIKKERAEEKLRKEIQEREEELKVKEAELLRGNPLLN 180

Query: 181 ELPSSFSVKRRL---LVFKNQARGEMKTPKRFINDTIRSDFHRKFLHKYMK 221
           E PSSFSVKRR    +VFKNQARGE KTPKRFINDTIR+DFHRKFLHKYMK
Sbjct: 181 EQPSSFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK 231

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BLAST of Sed0004751 vs. ExPASy Swiss-Prot
Match: Q2KJD3 (Spliceosome-associated protein CWC15 homolog OS=Bos taurus OX=9913 GN=CWC15 PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.3e-34
Identity = 106/236 (44.92%), Postives = 150/236 (63.56%), Query Frame = 0


Query: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKDGQDTHDELQRRNLR 60
           MTTAARPT+ PA+GG  +G   +   S++YSSRD+ +HT +K R+  QD  +E++ R+ R
Sbjct: 1   MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFR 60

Query: 61  DELEDRERRHFSSKNKSYDDRDHRKGNQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 120
            ELE+RER     KN+    R+H   + +     K+   D+I   +LDADD   D + ++
Sbjct: 61  RELEERERAAAREKNRDRPTREHTTSSSV----SKKPRLDQIPAANLDADDPLTDEEDED 120

Query: 121 ESSDDDDDDEDDTEALLAELEQIKKERVEEKLRKEELKVKESELFR------GNPLLN-- 180
           E  +++ DD DDT ALLAELE+IKKER EE+ RKE+ +  E E  R      GNPLLN  
Sbjct: 121 EDFEEESDD-DDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRMENILSGNPLLNLT 180

Query: 181 ---ELPSSFSVKRRL---LVFKNQARG--EMKTPKRFINDTIRSDFHRKFLHKYMK 221
              +  ++F VKRR    +VFKN A+G  + K  KRF+NDT+RS+FH+KF+ KY+K
Sbjct: 181 GPSQPQANFKVKRRWDDDVVFKNCAKGVDDQKKDKRFVNDTLRSEFHKKFMEKYIK 231

[Close]

BLAST of Sed0004751 vs. ExPASy Swiss-Prot
Match: Q0VFP5 (Protein CWC15 homolog OS=Xenopus tropicalis OX=8364 GN=cwc15 PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.3e-34
Identity = 107/236 (45.34%), Postives = 148/236 (62.71%), Query Frame = 0


Query: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKDGQDTHDELQRRNLR 60
           MTTAARPT+ PA+GG  +G   +   S++YSSRD+ +HT +K R+  QD  +E++ R+ R
Sbjct: 1   MTTAARPTFEPARGGRGKGEADLSQLSKQYSSRDLPSHTKIKYRQATQDAPEEVRSRDFR 60

Query: 61  DELEDRERRHFSSKNKSYDDRDHRKGNQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 120
            ELE+RER     KN+    R+H           K+   D+I   +LDADD   D  +D+
Sbjct: 61  RELEERERVAVREKNRDRPTREHAS------SVSKKPRLDQIPAANLDADDPLTDEDADD 120

Query: 121 ESSDDDDDDEDDTEALLAELEQIKKERVEEKLRK------EELKVKESELFRGNPLLN-- 180
              D D+D +DDT ALLAELE+IKKER EE+ RK      EE +++   +  GNPLLN  
Sbjct: 121 ---DSDEDSDDDTAALLAELEKIKKERAEEQARKELEQKAEEERIRMENILSGNPLLNLT 180

Query: 181 ---ELPSSFSVKRRL---LVFKNQARG--EMKTPKRFINDTIRSDFHRKFLHKYMK 221
              +  ++F VKRR    +VFKN A+G  EMK  KRF+NDT+RS+FH+KF+ KY+K
Sbjct: 181 GPAQSVAAFKVKRRWDDDVVFKNCAKGVDEMKKDKRFVNDTLRSEFHKKFMEKYIK 227

[Close]

BLAST of Sed0004751 vs. ExPASy Swiss-Prot
Match: Q6NUB2 (Protein CWC15 homolog A OS=Xenopus laevis OX=8355 GN=cwc15-a PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.9e-34
Identity = 109/237 (45.99%), Postives = 146/237 (61.60%), Query Frame = 0


Query: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKDGQDTHDELQRRNLR 60
           MTTAARPT+ PA+GG  +G   +   S++YSSRD+ +HT +K R+  QD  +E++ R+ R
Sbjct: 1   MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQATQDAPEEVRSRDFR 60

Query: 61  DELEDRERRHFSSKNKSYDDRDHRKGNQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 120
            ELE+RER     KN+    R+H           K+   D+I   +LDADD   D   D 
Sbjct: 61  RELEERERVVARDKNRDRPTREHTS------SVSKKPRLDQIPAANLDADDPLTDEDGD- 120

Query: 121 ESSDDDDDDEDDTEALLAELEQIKKERVEEKLRK------EELKVKESELFRGNPLLN-- 180
              D D+D +DDT ALLAELE+IKKER EEK RK      EE +++   +  GNPLLN  
Sbjct: 121 --EDSDEDSDDDTAALLAELEKIKKERAEEKDRKELEQKAEEERIRMENILSGNPLLNLT 180

Query: 181 ----ELPSSFSVKRRL---LVFKNQARG--EMKTPKRFINDTIRSDFHRKFLHKYMK 221
               +  +SF VKRR    +VFKN A+G  EMK  KRF+NDT+RS+FH+KF+ KY+K
Sbjct: 181 GPAAQSQASFKVKRRWDDDVVFKNCAKGVDEMKKQKRFVNDTLRSEFHKKFMEKYIK 228

[Close]

BLAST of Sed0004751 vs. ExPASy Swiss-Prot
Match: Q6DKE6 (Protein CWC15 homolog B OS=Xenopus laevis OX=8355 GN=cwc15-b PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.5e-33
Identity = 108/239 (45.19%), Postives = 149/239 (62.34%), Query Frame = 0


Query: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKDGQDTHDELQRRNLR 60
           MTTAARPT+ PA+GG  +G + +   S++YSSRD+ +HT +K R+  QD  +E++ R+ R
Sbjct: 1   MTTAARPTFEPARGGRGKGESDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRSRDFR 60

Query: 61  DELEDRERRHFSSKNKSYDDRDHRKGNQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 120
            ELE+RER     KN+    R+H           K+   D+I   +LDADD   D  +D 
Sbjct: 61  RELEERERVAVRDKNRDRPTREHTS------SVSKKPRLDQIPAANLDADDPLTDEDAD- 120

Query: 121 ESSDDDDDDEDDTEALLAELEQIKKERVEEKLRK------EELKVKESELFRGNPLLN-- 180
              D D+D +DDT ALLAELE+IKKER EE++RK      EE +++   +  GNPLLN  
Sbjct: 121 --EDSDEDSDDDTAALLAELEKIKKERAEEQVRKELEQKAEEERIRMENILSGNPLLNLT 180

Query: 181 ----ELPSSFSVKRRL---LVFKNQARG--EMK--TPKRFINDTIRSDFHRKFLHKYMK 221
               +  +SF VKRR    +VFKN A+G  EMK    KRF+NDT+RS+FH+KF+ KY+K
Sbjct: 181 GPAAQSQASFKVKRRWDDDVVFKNCAKGVDEMKKRQDKRFVNDTLRSEFHKKFMEKYVK 230

[Close]

BLAST of Sed0004751 vs. ExPASy Swiss-Prot
Match: Q9P013 (Spliceosome-associated protein CWC15 homolog OS=Homo sapiens OX=9606 GN=CWC15 PE=1 SV=2)

HSP 1 Score: 142.1 bits (357), Expect = 7.4e-33
Identity = 104/236 (44.07%), Postives = 148/236 (62.71%), Query Frame = 0


Query: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKDGQDTHDELQRRNLR 60
           MTTAARPT+ PA+GG  +G   +   S++YSSRD+ +HT +K R+  QD  +E++ R+ R
Sbjct: 1   MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFR 60

Query: 61  DELEDRERRHFSSKNKSYDDRDHRKGNQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 120
            ELE+RER     KN+    R+H   + +     K+   D+I   +LDADD   D   + 
Sbjct: 61  RELEERERAAAREKNRDRPTREHTTSSSV----SKKPRLDQIPAANLDADDPLTD---EE 120

Query: 121 ESSDDDDDDEDDTEALLAELEQIKKERVEEKLRKEELKVKESELFR------GNPLLN-- 180
           +   +++ D+DDT ALLAELE+IKKER EE+ RKE+ +  E E  R      GNPLLN  
Sbjct: 121 DEDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRMENILSGNPLLNLT 180

Query: 181 ---ELPSSFSVKRRL---LVFKNQARG--EMKTPKRFINDTIRSDFHRKFLHKYMK 221
              +  ++F VKRR    +VFKN A+G  + K  KRF+NDT+RS+FH+KF+ KY+K
Sbjct: 181 GPSQPQANFKVKRRWDDDVVFKNCAKGVDDQKKDKRFVNDTLRSEFHKKFMEKYIK 229

[Close]

BLAST of Sed0004751 vs. ExPASy TrEMBL
Match: A0A6J1KXM9 (protein CWC15 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498489 PE=3 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 1.9e-100
Identity = 208/231 (90.04%), Postives = 215/231 (93.07%), Query Frame = 0


Query: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKDGQDTHDELQRRNLR 60
           MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIA+HTTLKPRK+GQDTHDELQRRNLR
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60

Query: 61  DELEDRERRHFSSKNKSYDDRDHRKGNQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 120
           DELEDRERRHFSSKNKSYDDRDHRKG+QLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN
Sbjct: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 120

Query: 121 ESSDD--DDDDEDDTEALLAELEQIKKERVEEKLRK------EELKVKESELFRGNPLLN 180
           ESSDD  DDDDEDDTEALLAELEQIKKER EEKLRK      EELKVKE+EL RGNPLLN
Sbjct: 121 ESSDDDEDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN 180

Query: 181 ELPSSFSVKRRL---LVFKNQARGEMKTPKRFINDTIRSDFHRKFLHKYMK 221
           E P+SFSVKRR    +VFKNQARGE KTPKRFINDTIR+DFHRKFLHKYMK
Sbjct: 181 EQPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK 231

[Close]

BLAST of Sed0004751 vs. ExPASy TrEMBL
Match: A0A6J1GDY2 (protein CWC15 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453305 PE=3 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 1.9e-100
Identity = 208/231 (90.04%), Postives = 215/231 (93.07%), Query Frame = 0


Query: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKDGQDTHDELQRRNLR 60
           MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIA+HTTLKPRK+GQDTHDELQRRNLR
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60

Query: 61  DELEDRERRHFSSKNKSYDDRDHRKGNQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 120
           DELEDRERRHFSSKNKSYDDRDHRKG+QLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN
Sbjct: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 120

Query: 121 ESSDD--DDDDEDDTEALLAELEQIKKERVEEKLRK------EELKVKESELFRGNPLLN 180
           ESSDD  DDDDEDDTEALLAELEQIKKER EEKLRK      EELKVKE+EL RGNPLLN
Sbjct: 121 ESSDDDEDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN 180

Query: 181 ELPSSFSVKRRL---LVFKNQARGEMKTPKRFINDTIRSDFHRKFLHKYMK 221
           E P+SFSVKRR    +VFKNQARGE KTPKRFINDTIR+DFHRKFLHKYMK
Sbjct: 181 EQPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK 231

[Close]

BLAST of Sed0004751 vs. ExPASy TrEMBL
Match: A0A6J1KV80 (protein CWC15 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498489 PE=3 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 4.3e-100
Identity = 207/230 (90.00%), Postives = 214/230 (93.04%), Query Frame = 0


Query: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKDGQDTHDELQRRNLR 60
           MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIA+HTTLKPRK+GQDTHDELQRRNLR
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60

Query: 61  DELEDRERRHFSSKNKSYDDRDHRKGNQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 120
           DELEDRERRHFSSKNKSYDDRDHRKG+QLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN
Sbjct: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 120

Query: 121 ESSDD-DDDDEDDTEALLAELEQIKKERVEEKLRK------EELKVKESELFRGNPLLNE 180
           ES DD DDDDEDDTEALLAELEQIKKER EEKLRK      EELKVKE+EL RGNPLLNE
Sbjct: 121 ESDDDEDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNE 180

Query: 181 LPSSFSVKRRL---LVFKNQARGEMKTPKRFINDTIRSDFHRKFLHKYMK 221
            P+SFSVKRR    +VFKNQARGE KTPKRFINDTIR+DFHRKFLHKYMK
Sbjct: 181 QPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK 230

[Close]

BLAST of Sed0004751 vs. ExPASy TrEMBL
Match: A0A6J1GEX7 (protein CWC15 homolog isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453305 PE=3 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 4.3e-100
Identity = 207/230 (90.00%), Postives = 214/230 (93.04%), Query Frame = 0


Query: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKDGQDTHDELQRRNLR 60
           MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIA+HTTLKPRK+GQDTHDELQRRNLR
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60

Query: 61  DELEDRERRHFSSKNKSYDDRDHRKGNQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 120
           DELEDRERRHFSSKNKSYDDRDHRKG+QLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN
Sbjct: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 120

Query: 121 ESSDD-DDDDEDDTEALLAELEQIKKERVEEKLRK------EELKVKESELFRGNPLLNE 180
           ES DD DDDDEDDTEALLAELEQIKKER EEKLRK      EELKVKE+EL RGNPLLNE
Sbjct: 121 ESDDDEDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNE 180

Query: 181 LPSSFSVKRRL---LVFKNQARGEMKTPKRFINDTIRSDFHRKFLHKYMK 221
            P+SFSVKRR    +VFKNQARGE KTPKRFINDTIR+DFHRKFLHKYMK
Sbjct: 181 QPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK 230

[Close]

BLAST of Sed0004751 vs. ExPASy TrEMBL
Match: A0A6J1DW72 (protein CWC15 homolog OS=Momordica charantia OX=3673 GN=LOC111024640 PE=3 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 7.3e-100
Identity = 207/231 (89.61%), Postives = 213/231 (92.21%), Query Frame = 0


Query: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKDGQDTHDELQRRNLR 60
           MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIA+HTTLKPRK+GQDTHDELQRRNLR
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60

Query: 61  DELEDRERRHFSSKNKSYDDRDHRKGNQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 120
           DELEDRERRHFSSKNKSYDDRDHRKG+Q LLEGGKRDIEDRIIPRSLDADDSDVDVKSDN
Sbjct: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQFLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 120

Query: 121 ESSDDDD--DDEDDTEALLAELEQIKKERVEEKLRK------EELKVKESELFRGNPLLN 180
           ES DDDD  DDEDDTEALLAELEQIKKER EEKLRK      EELKVKE+EL RGNPLLN
Sbjct: 121 ESDDDDDDNDDEDDTEALLAELEQIKKERAEEKLRKEIQEREEELKVKEAELLRGNPLLN 180

Query: 181 ELPSSFSVKRRL---LVFKNQARGEMKTPKRFINDTIRSDFHRKFLHKYMK 221
           E PSSFSVKRR    +VFKNQARGE KTPKRFINDTIR+DFHRKFLHKYMK
Sbjct: 181 EQPSSFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK 231

[Close]

BLAST of Sed0004751 vs. TAIR 10
Match: AT3G13200.1 (Cwf15 / Cwc15 cell cycle control family protein )

HSP 1 Score: 318.9 bits (816), Expect = 3.1e-87
Identity = 180/231 (77.92%), Postives = 203/231 (87.88%), Query Frame = 0


Query: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIAAHTTLKPRKDGQDTHDELQRRNLR 60
           MTTAARPTWAPAKGGNEQGG RIFGPSQKYSSRD+AAHTTLKPR++GQ T +ELQ+ NLR
Sbjct: 1   MTTAARPTWAPAKGGNEQGGARIFGPSQKYSSRDVAAHTTLKPRREGQHTQEELQKINLR 60

Query: 61  DELEDRERRHFSSKNKSY-DDRDHRKGNQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSD 120
           DELE+RERRHFSSK+KSY DDRD R+G+QLLLE  KRD E+RIIPRS+DADDSDVD+KSD
Sbjct: 61  DELEERERRHFSSKDKSYNDDRDRRRGSQLLLEDSKRDPEERIIPRSVDADDSDVDIKSD 120

Query: 121 NESSDD-DDDDEDDTEALLAELEQIKKERVEEKLRK------EELKVKESELFRGNPLLN 180
           ++S D+ DDDDEDDTEAL+AEL+QIKKERVEE+LRK      EEL  KE EL +GNPLLN
Sbjct: 121 DDSDDESDDDDEDDTEALMAELDQIKKERVEERLRKEKEQQMEELNAKEEELLKGNPLLN 180

Query: 181 ELPSSFSVKRRL---LVFKNQARGEMKTPKRFINDTIRSDFHRKFLHKYMK 221
             P+SFSVKRR    +VFKNQARGEMK PKRFINDTIR+DFHRKFLH+YMK
Sbjct: 181 -TPTSFSVKRRWDDDVVFKNQARGEMKAPKRFINDTIRNDFHRKFLHRYMK 230

The following BLAST results are available for this feature:

BLAST of Sed0004751 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022950127.1	3.9e-100	90.04	protein CWC15 homolog isoform X1 [Cucurbita moschata] >XP_023005525.1 protein CW...	[more]
KAG7028289.1	3.9e-100	90.04	Photosystem I reaction center subunit V, chloroplastic, partial [Cucurbita argyr...	[more]
XP_038905802.1	5.2e-100	89.96	protein CWC15 homolog [Benincasa hispida]	[more]
XP_022950134.1	8.8e-100	90.00	protein CWC15 homolog isoform X2 [Cucurbita moschata] >XP_023005526.1 protein CW...	[more]
XP_022158066.1	1.5e-99	89.61	protein CWC15 homolog [Momordica charantia] >XP_022158067.1 protein CWC15 homolo...	[more]

BLAST of Sed0004751 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2KJD3	2.3e-34	44.92	Spliceosome-associated protein CWC15 homolog OS=Bos taurus OX=9913 GN=CWC15 PE=2...	[more]
Q0VFP5	2.3e-34	45.34	Protein CWC15 homolog OS=Xenopus tropicalis OX=8364 GN=cwc15 PE=2 SV=1	[more]
Q6NUB2	3.9e-34	45.99	Protein CWC15 homolog A OS=Xenopus laevis OX=8355 GN=cwc15-a PE=2 SV=1	[more]
Q6DKE6	1.5e-33	45.19	Protein CWC15 homolog B OS=Xenopus laevis OX=8355 GN=cwc15-b PE=2 SV=1	[more]
Q9P013	7.4e-33	44.07	Spliceosome-associated protein CWC15 homolog OS=Homo sapiens OX=9606 GN=CWC15 PE...	[more]

BLAST of Sed0004751 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KXM9	1.9e-100	90.04	protein CWC15 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498489 PE=...	[more]
A0A6J1GDY2	1.9e-100	90.04	protein CWC15 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453305 P...	[more]
A0A6J1KV80	4.3e-100	90.00	protein CWC15 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498489 PE=...	[more]
A0A6J1GEX7	4.3e-100	90.00	protein CWC15 homolog isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453305 P...	[more]
A0A6J1DW72	7.3e-100	89.61	protein CWC15 homolog OS=Momordica charantia OX=3673 GN=LOC111024640 PE=3 SV=1	[more]

BLAST of Sed0004751 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13200.1	3.1e-87	77.92	Cwf15 / Cwc15 cell cycle control family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 133..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..113
None	No IPR available	PANTHER	PTHR12718:SF6	SUBFAMILY NOT NAMED	coord: 1..220
IPR006973	Pre-mRNA-splicing factor Cwf15/Cwc15	PFAM	PF04889	Cwf_Cwc_15	coord: 1..220 e-value: 1.4E-65 score: 221.5
IPR006973	Pre-mRNA-splicing factor Cwf15/Cwc15	PANTHER	PTHR12718	CELL CYCLE CONTROL PROTEIN CWF15	coord: 1..220

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0004751.1	Sed0004751.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045292	mRNA cis splicing, via spliceosome
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071013	catalytic step 2 spliceosome
cellular_component	GO:0005681	spliceosomal complex
molecular_function	GO:0003723	RNA binding