Sed0004392 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAATCAAAACGTCTTTTACTCCTTGCTCCAGATTTCAACCTCATCCGCTAACCCTTTTGACTTAACAGATCAATCCTCCCAATAAAAACCAATTTCAATAAGCGTTGAGAAATATGATAGCGTCAATTTTACGATCGCCTTCTTCTTCTTTAGGGTCATTTCTCAAAACCCCACCAATCTTCTCTACTGCTCGCAAGCTAAGCTCCTCAGTCCGCTCCATGGCTGGTTCTGACTCTTCTCCTTTCAAGAAAATCCTCATTCAGAGGGACGACTCTGTCAGTTCACTTCCCTTTTTTCCCTTTTGATTTTTGCGTTTGTTTCTTTATCTGTGTATGATTCTATTTGCTGTTTCTTCTTTGGAAAAGACCATTGGCGTCGTGTTTTGGGGAAATTCGGCTTGTTTGTGTAATGGGTCGGTGCGATTTTTGTGCCTGTTGATGTTTTCTGGATATAGATTATGGGGTTTGCTATTTGAGATGATCAGTTGATTGAGTGGCTATGGCTGTGTTGTAATGTAATTACTGCTAGATTCCTCATTGTCCTGTGTTGTTGACTCATACTTGAGCTTGGATTAGGGTTTAGTTTATTGAAATGCTCAGATCCTTGGTTGAAATTTGCATTCATGGACTTTTCACTAAAGGGTTTTGAGTTTTGTTTCGTTTGGGCAGGAATTTGATGCTTATGTTGTGGGGAGAGACGATGCCCCTGGAATTGTTGTGCTTCAAGAATGGTGGGGTGTGGATTATGAAGTCAAGAATCATGCTGTTAAGATATCTGAGTTTGGTTCTGGTTTTAAGGCTCTTATTCCTGAGTAATGTTTTTGCTTTACTCTCTTGGAATATGAATTTGTTTCTTTGTGATGATGGCGATGATCTCGAATGTCGATGTTACAATTTGTTTCCTTGGTTGTTCTGCATTCTACTGATAAATTTCCCCTTTTTGTGATTCCGATATCAGTTTGTATAGAGGAAAGGTTGGATTAGATGTCGCTGAAGCGCAACATCTGATGGACGGTCTCGACTGGCAAGGTGCTGTGAAGGATATACATGCTTCAGTTAACTGGCTTAAGGCTAATGGCTCTAAGAAGGTATTCTACTATTTAGGATCCTGATGGACTGTAATCTTTAAATCTCTATTCTTGATGTCAATTTTATCTCTAGAAAGTTGAATATACTTGGATCATGCTAGGTTGGTGTAACTGGATACTGTATGGGAGGTGCTCTCTCAATTGCAAGTTCTGTTTTGATCCCTGAGGTTGATGCTGTTGTTTCATTCTATGGAGTTCCTTCACCTGAACTTGCAGACCCTGCTCAAGCTAAGGCACCTGTCCAGGCTCATTTCGGAGAGCTCGATTCCTTTGTTGGTTTCTCTGACTTGACGGTAGAACCTTTCTCTCATGCCTTCTCATCTTAAATGTCTTCCTTCCTTCATTCCATTTTTTCACTTAAGAAGTGTATATTTCATGCGTTAAATGCATAATGCCTACGGAATTTGATGGTTGTTACTGAGTTTGGAACTAAGGGTGTAGGCATTGTAAGTGCTCGATACACAATACTGTTGGTTGCTTGAGTCTCGTTATGAAATCATGATATTCAAATTCATAGTGTTTTCCTTTTTAGTTAAAATACACCCAGAAGAATTATTAGCAATCTGGTGTTATATAGGATACAATTTTACCATGTTGACTTTTGAGAAACCATCATGAGTATCCTAGTGATCAAAAGGGTTTTAAAAAACCAAAGGGTCATGAATTCAATCCATGATGACCACCTACCTAGAAATTAATTTCCCATCAACTTTTGACATCCGAATGTTATAGGGCAGGCGGTATGTTTCGTGAGAATAGTCGAAGTGCATATAAAATAGTTTGAACACTCGTGGATATCAAAATATAATTCTTTTTACTGTGTTAAAGATCAAACCTTTGACCGATTATAATGTGATTGAGTTTTCAGGCTGCTAAGAAATTGGAGGAAAAGCTCAAAGAATCAGGAGTTCCACACGAGGTGCATATATACGAAGGAACTGGGCATGCTTTCATGAACCGGTCTGAAGAAGGGGTGAAGAGGAGGAAGGACATGGGAATGGATGACGAGAACGTCGAGGCAGTCGAACTGGCCTGGTCTCGCTTTCAATCCTGGATGTCGCAGTACCTCTCAGATTAAACTGGTTTGCTTTCAATTCCATTCCCTCCTCATCCTAATTAGCTTCCTACTTCATGTGCCTATCAGATAAATTTGATTGCATTTGGGGCTCTGTTTGTTAAACTGGAATGAAACTTCTGAATTGTGTTGCTTGTTGAAATATGAACTCCTGTCAATAATTTCCCTCTTTCAAGTTTCTGTTTCCTCCATAGGTCTTCCATGTTTTACCCATCCCACCCTAATGAAGCCACCAAACACAGGTCTGTTTGAATGGAAGTCTATTAATGGGTGAAGCATAACACTTAAGTCCTTGAATGCCAAATGAGACTGAAAAATTCCTCCAAGAGTTGAGTGTTAATATTTATTATGAAATGTTTTTAATGGTTTGTATTTGATTGCAAACAATCATTCATCAAACCCTTTATCAAACTGTACTAATTATCAATGTGCAAATGAGTAGTTAACTATTCCAACTACGTTAATATTAATTTCTAAACGAGTAG AAAAAATCAAAACGTCTTTTACTCCTTGCTCCAGATTTCAACCTCATCCGCTAACCCTTTTGACTTAACAGATCAATCCTCCCAATAAAAACCAATTTCAATAAGCGTTGAGAAATATGATAGCGTCAATTTTACGATCGCCTTCTTCTTCTTTAGGGTCATTTCTCAAAACCCCACCAATCTTCTCTACTGCTCGCAAGCTAAGCTCCTCAGTCCGCTCCATGGCTGGTTCTGACTCTTCTCCTTTCAAGAAAATCCTCATTCAGAGGGACGACTCTGAATTTGATGCTTATGTTGTGGGGAGAGACGATGCCCCTGGAATTGTTGTGCTTCAAGAATGGTGGGGTGTGGATTATGAAGTCAAGAATCATGCTGTTAAGATATCTGAGTTTGGTTCTGGTTTTAAGGCTCTTATTCCTGATTTGTATAGAGGAAAGGTTGGATTAGATGTCGCTGAAGCGCAACATCTGATGGACGGTCTCGACTGGCAAGGTGCTGTGAAGGATATACATGCTTCAGTTAACTGGCTTAAGGCTAATGGCTCTAAGAAGGTTGGTGTAACTGGATACTGTATGGGAGGTGCTCTCTCAATTGCAAGTTCTGTTTTGATCCCTGAGGTTGATGCTGTTGTTTCATTCTATGGAGTTCCTTCACCTGAACTTGCAGACCCTGCTCAAGCTAAGGCACCTGTCCAGGCTCATTTCGGAGAGCTCGATTCCTTTGTTGGTTTCTCTGACTTGACGGCTGCTAAGAAATTGGAGGAAAAGCTCAAAGAATCAGGAGTTCCACACGAGGTGCATATATACGAAGGAACTGGGCATGCTTTCATGAACCGGTCTGAAGAAGGGGTGAAGAGGAGGAAGGACATGGGAATGGATGACGAGAACGTCGAGGCAGTCGAACTGGCCTGGTCTCGCTTTCAATCCTGGATGTCGCAGTACCTCTCAGATTAAACTGGTTTGCTTTCAATTCCATTCCCTCCTCATCCTAATTAGCTTCCTACTTCATGTGCCTATCAGATAAATTTGATTGCATTTGGGGCTCTGTTTGTTAAACTGGAATGAAACTTCTGAATTGTGTTGCTTGTTGAAATATGAACTCCTGTCAATAATTTCCCTCTTTCAAGTTTCTGTTTCCTCCATAGGTCTTCCATGTTTTACCCATCCCACCCTAATGAAGCCACCAAACACAGGTCTGTTTGAATGGAAGTCTATTAATGGGTGAAGCATAACACTTAAGTCCTTGAATGCCAAATGAGACTGAAAAATTCCTCCAAGAGTTGAGTGTTAATATTTATTATGAAATGTTTTTAATGGTTTGTATTTGATTGCAAACAATCATTCATCAAACCCTTTATCAAACTGTACTAATTATCAATGTGCAAATGAGTAGTTAACTATTCCAACTACGTTAATATTAATTTCTAAACGAGTAG ATGATAGCGTCAATTTTACGATCGCCTTCTTCTTCTTTAGGGTCATTTCTCAAAACCCCACCAATCTTCTCTACTGCTCGCAAGCTAAGCTCCTCAGTCCGCTCCATGGCTGGTTCTGACTCTTCTCCTTTCAAGAAAATCCTCATTCAGAGGGACGACTCTGAATTTGATGCTTATGTTGTGGGGAGAGACGATGCCCCTGGAATTGTTGTGCTTCAAGAATGGTGGGGTGTGGATTATGAAGTCAAGAATCATGCTGTTAAGATATCTGAGTTTGGTTCTGGTTTTAAGGCTCTTATTCCTGATTTGTATAGAGGAAAGGTTGGATTAGATGTCGCTGAAGCGCAACATCTGATGGACGGTCTCGACTGGCAAGGTGCTGTGAAGGATATACATGCTTCAGTTAACTGGCTTAAGGCTAATGGCTCTAAGAAGGTTGGTGTAACTGGATACTGTATGGGAGGTGCTCTCTCAATTGCAAGTTCTGTTTTGATCCCTGAGGTTGATGCTGTTGTTTCATTCTATGGAGTTCCTTCACCTGAACTTGCAGACCCTGCTCAAGCTAAGGCACCTGTCCAGGCTCATTTCGGAGAGCTCGATTCCTTTGTTGGTTTCTCTGACTTGACGGCTGCTAAGAAATTGGAGGAAAAGCTCAAAGAATCAGGAGTTCCACACGAGGTGCATATATACGAAGGAACTGGGCATGCTTTCATGAACCGGTCTGAAGAAGGGGTGAAGAGGAGGAAGGACATGGGAATGGATGACGAGAACGTCGAGGCAGTCGAACTGGCCTGGTCTCGCTTTCAATCCTGGATGTCGCAGTACCTCTCAGATTAA MIASILRSPSSSLGSFLKTPPIFSTARKLSSSVRSMAGSDSSPFKKILIQRDDSEFDAYVVGRDDAPGIVVLQEWWGVDYEVKNHAVKISEFGSGFKALIPDLYRGKVGLDVAEAQHLMDGLDWQGAVKDIHASVNWLKANGSKKVGVTGYCMGGALSIASSVLIPEVDAVVSFYGVPSPELADPAQAKAPVQAHFGELDSFVGFSDLTAAKKLEEKLKESGVPHEVHIYEGTGHAFMNRSEEGVKRRKDMGMDDENVEAVELAWSRFQSWMSQYLSD Homology
BLAST of Sed0004392 vs. NCBI nr
Match: XP_038887361.1 (protein usf [Benincasa hispida]) HSP 1 Score: 474.9 bits (1221), Expect = 4.6e-130 Identity = 245/283 (86.57%), Postives = 256/283 (90.46%), Query Frame = 0
BLAST of Sed0004392 vs. NCBI nr
Match: XP_004144499.1 (uncharacterized protein LOC101222245 [Cucumis sativus] >KGN43508.1 hypothetical protein Csa_020347 [Cucumis sativus]) HSP 1 Score: 474.6 bits (1220), Expect = 6.0e-130 Identity = 244/282 (86.52%), Postives = 259/282 (91.84%), Query Frame = 0
BLAST of Sed0004392 vs. NCBI nr
Match: XP_022952350.1 (uncharacterized protein LOC111455058 [Cucurbita moschata]) HSP 1 Score: 471.9 bits (1213), Expect = 3.9e-129 Identity = 243/282 (86.17%), Postives = 255/282 (90.43%), Query Frame = 0
BLAST of Sed0004392 vs. NCBI nr
Match: XP_022136233.1 (uncharacterized protein LOC111007979 [Momordica charantia]) HSP 1 Score: 470.3 bits (1209), Expect = 1.1e-128 Identity = 242/283 (85.51%), Postives = 259/283 (91.52%), Query Frame = 0
BLAST of Sed0004392 vs. NCBI nr
Match: KAG7011902.1 (Protein usf [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 470.3 bits (1209), Expect = 1.1e-128 Identity = 242/282 (85.82%), Postives = 254/282 (90.07%), Query Frame = 0
BLAST of Sed0004392 vs. ExPASy Swiss-Prot
Match: P46209 (Protein usf OS=Aquifex pyrophilus OX=2714 GN=usf PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.4e-20 Identity = 66/189 (34.92%), Postives = 96/189 (50.79%), Query Frame = 0
BLAST of Sed0004392 vs. ExPASy Swiss-Prot
Match: O67802 (Putative carboxymethylenebutenolidase OS=Aquifex aeolicus (strain VF5) OX=224324 GN=aq_1997 PE=3 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 9.4e-17 Identity = 64/215 (29.77%), Postives = 107/215 (49.77%), Query Frame = 0
BLAST of Sed0004392 vs. ExPASy Swiss-Prot
Match: P0A115 (Carboxymethylenebutenolidase OS=Pseudomonas knackmussii (strain DSM 6978 / LMG 23759 / B13) OX=1301098 GN=clcD PE=1 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.0e-10 Identity = 64/215 (29.77%), Postives = 98/215 (45.58%), Query Frame = 0
BLAST of Sed0004392 vs. ExPASy Swiss-Prot
Match: P0A114 (Carboxymethylenebutenolidase OS=Pseudomonas putida OX=303 GN=clcD PE=1 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.0e-10 Identity = 64/215 (29.77%), Postives = 98/215 (45.58%), Query Frame = 0
BLAST of Sed0004392 vs. ExPASy Swiss-Prot
Match: P71505 (Putative carboxymethylenebutenolidase OS=Methylorubrum extorquens (strain ATCC 14718 / DSM 1338 / JCM 2805 / NCIMB 9133 / AM1) OX=272630 GN=MexAM1_META1p1735 PE=3 SV=2) HSP 1 Score: 65.5 bits (158), Expect = 1.1e-09 Identity = 58/228 (25.44%), Postives = 102/228 (44.74%), Query Frame = 0
BLAST of Sed0004392 vs. ExPASy TrEMBL
Match: A0A0A0K247 (DLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G043010 PE=4 SV=1) HSP 1 Score: 474.6 bits (1220), Expect = 2.9e-130 Identity = 244/282 (86.52%), Postives = 259/282 (91.84%), Query Frame = 0
BLAST of Sed0004392 vs. ExPASy TrEMBL
Match: A0A6J1GLI6 (uncharacterized protein LOC111455058 OS=Cucurbita moschata OX=3662 GN=LOC111455058 PE=4 SV=1) HSP 1 Score: 471.9 bits (1213), Expect = 1.9e-129 Identity = 243/282 (86.17%), Postives = 255/282 (90.43%), Query Frame = 0
BLAST of Sed0004392 vs. ExPASy TrEMBL
Match: A0A6J1C735 (uncharacterized protein LOC111007979 OS=Momordica charantia OX=3673 GN=LOC111007979 PE=4 SV=1) HSP 1 Score: 470.3 bits (1209), Expect = 5.5e-129 Identity = 242/283 (85.51%), Postives = 259/283 (91.52%), Query Frame = 0
BLAST of Sed0004392 vs. ExPASy TrEMBL
Match: A0A5A7T9V7 (Protein usf OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G004370 PE=4 SV=1) HSP 1 Score: 468.4 bits (1204), Expect = 2.1e-128 Identity = 241/282 (85.46%), Postives = 256/282 (90.78%), Query Frame = 0
BLAST of Sed0004392 vs. ExPASy TrEMBL
Match: A0A1S3C0H7 (protein usf OS=Cucumis melo OX=3656 GN=LOC103495610 PE=4 SV=1) HSP 1 Score: 468.4 bits (1204), Expect = 2.1e-128 Identity = 241/282 (85.46%), Postives = 256/282 (90.78%), Query Frame = 0
BLAST of Sed0004392 vs. TAIR 10
Match: AT2G32520.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 402.5 bits (1033), Expect = 2.7e-112 Identity = 191/236 (80.93%), Postives = 210/236 (88.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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